ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 182 |
| AclWI | GGATC | 2 cut(s) | 41, 77 |
| AcuI | CTGAAG | 1 cut(s) | 30 |
| AgsI | TTSAA | 1 cut(s) | 77 |
| AluBI | AGCT | 2 cut(s) | 52, 101 |
| AluI | AGCT | 2 cut(s) | 52, 101 |
| AlwI | GGATC | 2 cut(s) | 41, 77 |
| ApeKI | GCWGC | 1 cut(s) | 22 |
| AspLEI | GCGC | 2 cut(s) | 22, 143 |
| AspS9I | GGNCC | 1 cut(s) | 124 |
| AvaII | GGWCC | 1 cut(s) | 124 |
| BbvI | GCAGC | 1 cut(s) | 9 |
| BccI | CCATC | 1 cut(s) | 23 |
| BfoI | RGCGCY | 2 cut(s) | 23, 144 |
| BisI | GCNGC | 1 cut(s) | 23 |
| BlsI | GCNGC | 1 cut(s) | 24 |
| Bme18I | GGWCC | 1 cut(s) | 124 |
| BmgT120I | GGNCC | 1 cut(s) | 124 |
| BsaJI | CCNNGG | 1 cut(s) | 15 |
| BseDI | CCNNGG | 1 cut(s) | 15 |
| BseGI | GGATG | 1 cut(s) | 34 |
| BseMII | CTCAG | 1 cut(s) | 142 |
| BseXI | GCAGC | 1 cut(s) | 9 |
| BseYI | CCCAGC | 1 cut(s) | 52 |
| Bsp143I | GATC | 2 cut(s) | 33, 82 |
| Bsp19I | CCATGG | 1 cut(s) | 15 |
| BspACI | CCGC | 1 cut(s) | 182 |
| BspCNI | CTCAG | 2 cut(s) | 141, 255 |
| BspPI | GGATC | 2 cut(s) | 41, 77 |
| BssECI | CCNNGG | 1 cut(s) | 15 |
| BssMI | GATC | 2 cut(s) | 33, 82 |
| BssT1I | CCWWGG | 1 cut(s) | 15 |
| Bst6I | CTCTTC | 1 cut(s) | 147 |
| BstDEI | CTNAG | 2 cut(s) | 128, 242 |
| BstDSI | CCRYGG | 1 cut(s) | 15 |
| BstF5I | GGATG | 1 cut(s) | 34 |
| BstH2I | RGCGCY | 2 cut(s) | 23, 144 |
| BstHHI | GCGC | 2 cut(s) | 22, 143 |
| BstKTI | GATC | 2 cut(s) | 36, 85 |
| BstMBI | GATC | 2 cut(s) | 33, 82 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 11, 247 |
| BstNSI | RCATGY | 1 cut(s) | 203 |
| BstV1I | GCAGC | 1 cut(s) | 9 |
| BstX2I | RGATCY | 1 cut(s) | 82 |
| BstYI | RGATCY | 1 cut(s) | 82 |
| BtgI | CCRYGG | 1 cut(s) | 15 |
| BtsCI | GGATG | 1 cut(s) | 34 |
| BtsIMutI | CAGTG | 1 cut(s) | 136 |
| CfoI | GCGC | 2 cut(s) | 22, 143 |
| Cfr13I | GGNCC | 1 cut(s) | 124 |
| CviAII | CATG | 3 cut(s) | 16, 113, 200 |
| CviJI | RGCY | 5 cut(s) | 5, 14, 52, 101, 241 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 14, 52, 101, 241 |
| DdeI | CTNAG | 2 cut(s) | 128, 242 |
| DpnI | GATC | 2 cut(s) | 35, 84 |
| DpnII | GATC | 2 cut(s) | 33, 82 |
| Eam1104I | CTCTTC | 1 cut(s) | 147 |
| EarI | CTCTTC | 1 cut(s) | 147 |
| Eco130I | CCWWGG | 1 cut(s) | 15 |
| Eco47I | GGWCC | 1 cut(s) | 124 |
| Eco57I | CTGAAG | 1 cut(s) | 30 |
| EcoT14I | CCWWGG | 1 cut(s) | 15 |
| ErhI | CCWWGG | 1 cut(s) | 15 |
| FaeI | CATG | 3 cut(s) | 19, 116, 203 |
| FaiI | YATR | 8 cut(s) | 17, 114, 146, 201, 206, 231, 233, 248 |
| FatI | CATG | 3 cut(s) | 15, 112, 199 |
| FauNDI | CATATG | 1 cut(s) | 231 |
| Fnu4HI | GCNGC | 1 cut(s) | 23 |
| FokI | GGATG | 1 cut(s) | 41 |
| Fsp4HI | GCNGC | 1 cut(s) | 23 |
| GlaI | GCGC | 2 cut(s) | 21, 142 |
| GluI | GCNGC | 1 cut(s) | 23 |
| GsaI | CCCAGC | 1 cut(s) | 56 |
| HaeII | RGCGCY | 2 cut(s) | 23, 144 |
| HhaI | GCGC | 2 cut(s) | 22, 143 |
| Hin1II | CATG | 3 cut(s) | 19, 116, 203 |
| Hin6I | GCGC | 2 cut(s) | 20, 141 |
| HinP1I | GCGC | 2 cut(s) | 20, 141 |
| Hpy188I | TCNGA | 1 cut(s) | 38 |
| HpyAV | CCTTC | 1 cut(s) | 71 |
| HpyCH4V | TGCA | 2 cut(s) | 45, 227 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 11, 247 |
| HpyF3I | CTNAG | 2 cut(s) | 128, 242 |
| Hsp92II | CATG | 3 cut(s) | 19, 116, 203 |
| HspAI | GCGC | 2 cut(s) | 20, 141 |
| Kzo9I | GATC | 2 cut(s) | 33, 82 |
| LpnPI | CCDG | 2 cut(s) | 11, 38 |
| Lsp1109I | GCAGC | 1 cut(s) | 9 |
| MaeIII | GTNAC | 1 cut(s) | 157 |
| MalI | GATC | 2 cut(s) | 35, 84 |
| MboI | GATC | 2 cut(s) | 33, 82 |
| MboII | GAAGA | 1 cut(s) | 164 |
| MflI | RGATCY | 1 cut(s) | 82 |
| MluCI | AATT | 1 cut(s) | 57 |
| MmeI | TCCRAC | 1 cut(s) | 87 |
| MnlI | CCTC | 3 cut(s) | 96, 137, 148 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 11, 247 |
| NcoI | CCATGG | 1 cut(s) | 15 |
| NdeI | CATATG | 1 cut(s) | 231 |
| NdeII | GATC | 2 cut(s) | 33, 82 |
| NlaIII | CATG | 3 cut(s) | 19, 116, 203 |
| NspI | RCATGY | 1 cut(s) | 203 |
| PkrI | GCNGC | 1 cut(s) | 24 |
| PspFI | CCCAGC | 1 cut(s) | 52 |
| PspPI | GGNCC | 1 cut(s) | 124 |
| PsuI | RGATCY | 1 cut(s) | 82 |
| SatI | GCNGC | 1 cut(s) | 23 |
| Sau3AI | GATC | 2 cut(s) | 33, 82 |
| Sau96I | GGNCC | 1 cut(s) | 124 |
| SetI | ASST | 5 cut(s) | 54, 103, 129, 159, 178 |
| SgeI | CNNG | 7 cut(s) | 28, 38, 65, 125, 204, 212, 233 |
| SinI | GGWCC | 1 cut(s) | 124 |
| Sse9I | AATT | 1 cut(s) | 57 |
| SsiI | CCGC | 1 cut(s) | 182 |
| StyI | CCWWGG | 1 cut(s) | 15 |
| TasI | AATT | 1 cut(s) | 57 |
| TscAI | CASTG | 1 cut(s) | 136 |
| TseI | GCWGC | 1 cut(s) | 22 |
| TspDTI | ATGAA | 1 cut(s) | 185 |
| TspRI | CASTG | 1 cut(s) | 136 |
| VpaK11BI | GGWCC | 1 cut(s) | 124 |
| XceI | RCATGY | 1 cut(s) | 203 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 22 |