Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 234 |
| AclWI | GGATC | 1 cut(s) | 87 |
| AfaI | GTAC | 1 cut(s) | 51 |
| AgsI | TTSAA | 1 cut(s) | 245 |
| AjiI | CACGTC | 1 cut(s) | 301 |
| AluBI | AGCT | 3 cut(s) | 143, 257, 334 |
| AluI | AGCT | 3 cut(s) | 143, 257, 334 |
| Alw26I | GTCTC | 1 cut(s) | 128 |
| AlwI | GGATC | 1 cut(s) | 87 |
| ApeKI | GCWGC | 1 cut(s) | 224 |
| BaeGI | GKGCMC | 2 cut(s) | 33, 237 |
| BanI | GGYRCC | 1 cut(s) | 234 |
| BbvI | GCAGC | 1 cut(s) | 211 |
| BceAI | ACGGC | 2 cut(s) | 332, 380 |
| BcoDI | GTCTC | 1 cut(s) | 128 |
| BfaI | CTAG | 2 cut(s) | 176, 335 |
| BfmI | CTRYAG | 1 cut(s) | 313 |
| BisI | GCNGC | 1 cut(s) | 225 |
| BlsI | GCNGC | 1 cut(s) | 226 |
| BmgBI | CACGTC | 1 cut(s) | 301 |
| BmiI | GGNNCC | 1 cut(s) | 236 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 76, 106 |
| Bse1I | ACTGG | 2 cut(s) | 57, 120 |
| BseNI | ACTGG | 2 cut(s) | 57, 120 |
| BseRI | GAGGAG | 2 cut(s) | 118, 227 |
| BseSI | GKGCMC | 2 cut(s) | 33, 237 |
| BseXI | GCAGC | 1 cut(s) | 211 |
| BshNI | GGYRCC | 1 cut(s) | 234 |
| BsmAI | GTCTC | 1 cut(s) | 128 |
| Bsp1286I | GDGCHC | 2 cut(s) | 33, 237 |
| Bsp143I | GATC | 1 cut(s) | 79 |
| BspHI | TCATGA | 1 cut(s) | 328 |
| BspLI | GGNNCC | 1 cut(s) | 236 |
| BspMAI | CTGCAG | 1 cut(s) | 317 |
| BspPI | GGATC | 1 cut(s) | 87 |
| BspT107I | GGYRCC | 1 cut(s) | 234 |
| BsrI | ACTGG | 2 cut(s) | 57, 120 |
| BssMI | GATC | 1 cut(s) | 79 |
| Bst4CI | ACNGT | 1 cut(s) | 20 |
| BstKTI | GATC | 1 cut(s) | 82 |
| BstMAI | GTCTC | 1 cut(s) | 128 |
| BstMBI | GATC | 1 cut(s) | 79 |
| BstSFI | CTRYAG | 1 cut(s) | 313 |
| BstSLI | GKGCMC | 2 cut(s) | 33, 237 |
| BstV1I | GCAGC | 1 cut(s) | 211 |
| BtrI | CACGTC | 1 cut(s) | 301 |
| CciI | TCATGA | 1 cut(s) | 328 |
| Csp6I | GTAC | 1 cut(s) | 50 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 27, 62 |
| CviAII | CATG | 3 cut(s) | 151, 203, 329 |
| CviJI | RGCY | 4 cut(s) | 143, 224, 257, 334 |
| CviKI_1 | RGCY | 4 cut(s) | 143, 224, 257, 334 |
| CviQI | GTAC | 1 cut(s) | 50 |
| DpnI | GATC | 1 cut(s) | 81 |
| DpnII | GATC | 1 cut(s) | 79 |
| FaeI | CATG | 3 cut(s) | 154, 206, 332 |
| FatI | CATG | 3 cut(s) | 150, 202, 328 |
| Fnu4HI | GCNGC | 1 cut(s) | 225 |
| Fsp4HI | GCNGC | 1 cut(s) | 225 |
| FspBI | CTAG | 2 cut(s) | 176, 335 |
| GluI | GCNGC | 1 cut(s) | 225 |
| Hin1II | CATG | 3 cut(s) | 154, 206, 332 |
| Hpy188I | TCNGA | 2 cut(s) | 84, 298 |
| Hpy188III | TCNNGA | 1 cut(s) | 329 |
| HpyAV | CCTTC | 1 cut(s) | 239 |
| HpyCH4III | ACNGT | 1 cut(s) | 20 |
| HpyCH4IV | ACGT | 1 cut(s) | 300 |
| HpyCH4V | TGCA | 2 cut(s) | 193, 315 |
| HpySE526I | ACGT | 1 cut(s) | 300 |
| Hsp92II | CATG | 3 cut(s) | 154, 206, 332 |
| Kzo9I | GATC | 1 cut(s) | 79 |
| LpnPI | CCDG | 3 cut(s) | 38, 133, 148 |
| Lsp1109I | GCAGC | 1 cut(s) | 211 |
| MaeI | CTAG | 2 cut(s) | 176, 335 |
| MaeII | ACGT | 1 cut(s) | 300 |
| MaeIII | GTNAC | 1 cut(s) | 168 |
| MalI | GATC | 1 cut(s) | 81 |
| MboI | GATC | 1 cut(s) | 79 |
| MhlI | GDGCHC | 2 cut(s) | 33, 237 |
| MluCI | AATT | 3 cut(s) | 56, 240, 369 |
| MnlI | CCTC | 4 cut(s) | 123, 139, 205, 353 |
| MseI | TTAA | 3 cut(s) | 9, 372, 400 |
| MslI | CAYNNNNRTG | 1 cut(s) | 207 |
| NdeII | GATC | 1 cut(s) | 79 |
| NlaIII | CATG | 3 cut(s) | 154, 206, 332 |
| NlaIV | GGNNCC | 1 cut(s) | 236 |
| PagI | TCATGA | 1 cut(s) | 328 |
| PkrI | GCNGC | 1 cut(s) | 226 |
| PspN4I | GGNNCC | 1 cut(s) | 236 |
| PstI | CTGCAG | 1 cut(s) | 317 |
| RsaI | GTAC | 1 cut(s) | 51 |
| RsaNI | GTAC | 1 cut(s) | 50 |
| RseI | CAYNNNNRTG | 1 cut(s) | 207 |
| SaqAI | TTAA | 3 cut(s) | 9, 372, 400 |
| SatI | GCNGC | 1 cut(s) | 225 |
| Sau3AI | GATC | 1 cut(s) | 79 |
| SduI | GDGCHC | 2 cut(s) | 33, 237 |
| SetI | ASST | 7 cut(s) | 145, 187, 240, 259, 303, 336, 395 |
| SfcI | CTRYAG | 1 cut(s) | 313 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 207 |
| Sse9I | AATT | 3 cut(s) | 56, 240, 369 |
| SspMI | CTAG | 2 cut(s) | 176, 335 |
| TaaI | ACNGT | 1 cut(s) | 20 |
| TaiI | ACGT | 1 cut(s) | 303 |
| TasI | AATT | 3 cut(s) | 56, 240, 369 |
| Tru1I | TTAA | 3 cut(s) | 9, 372, 400 |
| Tru9I | TTAA | 3 cut(s) | 9, 372, 400 |
| TseI | GCWGC | 1 cut(s) | 224 |
| TspDTI | ATGAA | 4 cut(s) | 17, 92, 150, 219 |
| XspI | CTAG | 2 cut(s) | 176, 335 |