ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 514 |
| AciI | CCGC | 1 cut(s) | 609 |
| AcoI | YGGCCR | 1 cut(s) | 279 |
| AcsI | RAATTY | 1 cut(s) | 557 |
| AfaI | GTAC | 4 cut(s) | 31, 158, 545, 615 |
| AgsI | TTSAA | 3 cut(s) | 74, 480, 551 |
| AluBI | AGCT | 1 cut(s) | 53 |
| AluI | AGCT | 1 cut(s) | 53 |
| Alw21I | GWGCWC | 1 cut(s) | 325 |
| Alw26I | GTCTC | 1 cut(s) | 289 |
| Alw44I | GTGCAC | 1 cut(s) | 321 |
| AoxI | GGCC | 1 cut(s) | 279 |
| ApaLI | GTGCAC | 1 cut(s) | 321 |
| ApeKI | GCWGC | 1 cut(s) | 80 |
| ApoI | RAATTY | 1 cut(s) | 557 |
| AspS9I | GGNCC | 1 cut(s) | 593 |
| AsuC2I | CCSGG | 1 cut(s) | 278 |
| AsuHPI | GGTGA | 1 cut(s) | 304 |
| AvaII | GGWCC | 1 cut(s) | 593 |
| BaeGI | GKGCMC | 1 cut(s) | 325 |
| Bbv12I | GWGCWC | 1 cut(s) | 325 |
| BbvI | GCAGC | 1 cut(s) | 67 |
| BccI | CCATC | 2 cut(s) | 323, 584 |
| BclI | TGATCA | 2 cut(s) | 15, 504 |
| BcnI | CCSGG | 1 cut(s) | 278 |
| BcoDI | GTCTC | 1 cut(s) | 289 |
| BisI | GCNGC | 1 cut(s) | 81 |
| BlsI | GCNGC | 1 cut(s) | 82 |
| BmcAI | AGTACT | 2 cut(s) | 545, 615 |
| Bme1390I | CCNGG | 1 cut(s) | 278 |
| Bme18I | GGWCC | 1 cut(s) | 593 |
| BmgT120I | GGNCC | 1 cut(s) | 593 |
| BmiI | GGNNCC | 2 cut(s) | 339, 439 |
| BmrFI | CCNGG | 1 cut(s) | 278 |
| BmsI | GCATC | 1 cut(s) | 67 |
| BpmI | CTGGAG | 1 cut(s) | 324 |
| BpuMI | CCSGG | 1 cut(s) | 278 |
| Bse118I | RCCGGY | 1 cut(s) | 281 |
| BseGI | GGATG | 1 cut(s) | 227 |
| BseMII | CTCAG | 1 cut(s) | 584 |
| BseSI | GKGCMC | 1 cut(s) | 325 |
| BseX3I | CGGCCG | 1 cut(s) | 279 |
| BseXI | GCAGC | 1 cut(s) | 67 |
| Bsh1285I | CGRYCG | 1 cut(s) | 282 |
| BshFI | GGCC | 1 cut(s) | 281 |
| BsiEI | CGRYCG | 1 cut(s) | 282 |
| BsiHKAI | GWGCWC | 1 cut(s) | 325 |
| BsiSI | CCGG | 2 cut(s) | 278, 282 |
| BsmAI | GTCTC | 1 cut(s) | 289 |
| BsnI | GGCC | 1 cut(s) | 281 |
| Bsp1286I | GDGCHC | 1 cut(s) | 325 |
| Bsp1407I | TGTACA | 1 cut(s) | 156 |
| Bsp143I | GATC | 4 cut(s) | 10, 15, 43, 504 |
| BspACI | CCGC | 1 cut(s) | 609 |
| BspANI | GGCC | 1 cut(s) | 281 |
| BspCNI | CTCAG | 1 cut(s) | 583 |
| BspLI | GGNNCC | 2 cut(s) | 339, 439 |
| BsrFI | RCCGGY | 1 cut(s) | 281 |
| BsrGI | TGTACA | 1 cut(s) | 156 |
| BssAI | RCCGGY | 1 cut(s) | 281 |
| BssMI | GATC | 4 cut(s) | 10, 15, 43, 504 |
| Bst4CI | ACNGT | 2 cut(s) | 163, 533 |
| Bst6I | CTCTTC | 3 cut(s) | 198, 481, 534 |
| BstAUI | TGTACA | 1 cut(s) | 156 |
| BstDEI | CTNAG | 4 cut(s) | 244, 486, 570, 645 |
| BstEII | GGTNACC | 1 cut(s) | 173 |
| BstF5I | GGATG | 1 cut(s) | 227 |
| BstKTI | GATC | 4 cut(s) | 13, 18, 46, 507 |
| BstMAI | GTCTC | 1 cut(s) | 289 |
| BstMBI | GATC | 4 cut(s) | 10, 15, 43, 504 |
| BstMCI | CGRYCG | 1 cut(s) | 282 |
| BstPI | GGTNACC | 1 cut(s) | 173 |
| BstSCI | CCNGG | 1 cut(s) | 276 |
| BstSLI | GKGCMC | 1 cut(s) | 325 |
| BstV1I | GCAGC | 1 cut(s) | 67 |
| BstZI | CGGCCG | 1 cut(s) | 279 |
| BsuRI | GGCC | 1 cut(s) | 281 |
| BtsCI | GGATG | 1 cut(s) | 227 |
| BtsI | GCAGTG | 1 cut(s) | 325 |
| BtsIMutI | CAGTG | 1 cut(s) | 325 |
| Cfr10I | RCCGGY | 1 cut(s) | 281 |
| Cfr13I | GGNCC | 1 cut(s) | 593 |
| Csp6I | GTAC | 4 cut(s) | 30, 157, 544, 614 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 344, 379 |
| CviAII | CATG | 3 cut(s) | 197, 334, 508 |
| CviJI | RGCY | 6 cut(s) | 53, 268, 281, 338, 567, 604 |
| CviKI_1 | RGCY | 6 cut(s) | 53, 268, 281, 338, 567, 604 |
| CviQI | GTAC | 4 cut(s) | 30, 157, 544, 614 |
| DdeI | CTNAG | 4 cut(s) | 244, 486, 570, 645 |
| DpnI | GATC | 4 cut(s) | 12, 17, 45, 506 |
| DpnII | GATC | 4 cut(s) | 10, 15, 43, 504 |
| EaeI | YGGCCR | 1 cut(s) | 279 |
| EagI | CGGCCG | 1 cut(s) | 279 |
| Eam1104I | CTCTTC | 3 cut(s) | 198, 481, 534 |
| EarI | CTCTTC | 3 cut(s) | 198, 481, 534 |
| EclXI | CGGCCG | 1 cut(s) | 279 |
| Eco47I | GGWCC | 1 cut(s) | 593 |
| Eco52I | CGGCCG | 1 cut(s) | 279 |
| Eco91I | GGTNACC | 1 cut(s) | 173 |
| EcoO65I | GGTNACC | 1 cut(s) | 173 |
| FaeI | CATG | 3 cut(s) | 200, 337, 511 |
| FaiI | YATR | 7 cut(s) | 198, 262, 335, 462, 509, 523, 620 |
| FatI | CATG | 3 cut(s) | 196, 333, 507 |
| FbaI | TGATCA | 2 cut(s) | 15, 504 |
| FblI | GTMKAC | 1 cut(s) | 514 |
| Fnu4HI | GCNGC | 1 cut(s) | 81 |
| FokI | GGATG | 1 cut(s) | 214 |
| Fsp4HI | GCNGC | 1 cut(s) | 81 |
| GluI | GCNGC | 1 cut(s) | 81 |
| GsuI | CTGGAG | 1 cut(s) | 324 |
| HaeIII | GGCC | 1 cut(s) | 281 |
| HapII | CCGG | 2 cut(s) | 278, 282 |
| Hin1II | CATG | 3 cut(s) | 200, 337, 511 |
| HincII | GTYRAC | 1 cut(s) | 515 |
| HindII | GTYRAC | 1 cut(s) | 515 |
| HinfI | GANTC | 1 cut(s) | 37 |
| HpaII | CCGG | 2 cut(s) | 278, 282 |
| HphI | GGTGA | 1 cut(s) | 304 |
| Hpy166II | GTNNAC | 4 cut(s) | 157, 159, 323, 515 |
| Hpy188I | TCNGA | 3 cut(s) | 10, 15, 625 |
| Hpy188III | TCNNGA | 3 cut(s) | 41, 119, 341 |
| Hpy8I | GTNNAC | 4 cut(s) | 157, 159, 323, 515 |
| Hpy99I | CGWCG | 1 cut(s) | 519 |
| HpyAV | CCTTC | 2 cut(s) | 114, 203 |
| HpyCH4III | ACNGT | 2 cut(s) | 163, 533 |
| HpyCH4V | TGCA | 3 cut(s) | 287, 323, 330 |
| HpyF3I | CTNAG | 4 cut(s) | 244, 486, 570, 645 |
| Hsp92II | CATG | 3 cut(s) | 200, 337, 511 |
| Ksp22I | TGATCA | 2 cut(s) | 15, 504 |
| Kzo9I | GATC | 4 cut(s) | 10, 15, 43, 504 |
| LmnI | GCTCC | 1 cut(s) | 343 |
| LpnPI | CCDG | 4 cut(s) | 109, 291, 295, 354 |
| Lsp1109I | GCAGC | 1 cut(s) | 67 |
| LweI | GCATC | 1 cut(s) | 67 |
| MaeIII | GTNAC | 1 cut(s) | 173 |
| MalI | GATC | 4 cut(s) | 12, 17, 45, 506 |
| MboI | GATC | 4 cut(s) | 10, 15, 43, 504 |
| MboII | GAAGA | 6 cut(s) | 86, 185, 300, 442, 468, 551 |
| MfeI | CAATTG | 1 cut(s) | 639 |
| MhlI | GDGCHC | 1 cut(s) | 325 |
| MluCI | AATT | 2 cut(s) | 557, 639 |
| MmeI | TCCRAC | 1 cut(s) | 407 |
| MnlI | CCTC | 5 cut(s) | 19, 61, 258, 579, 606 |
| MseI | TTAA | 2 cut(s) | 165, 575 |
| MspI | CCGG | 2 cut(s) | 278, 282 |
| MspR9I | CCNGG | 1 cut(s) | 278 |
| MunI | CAATTG | 1 cut(s) | 639 |
| NciI | CCSGG | 1 cut(s) | 278 |
| NdeII | GATC | 4 cut(s) | 10, 15, 43, 504 |
| NlaIII | CATG | 3 cut(s) | 200, 337, 511 |
| NlaIV | GGNNCC | 2 cut(s) | 339, 439 |
| PfeI | GAWTC | 1 cut(s) | 37 |
| PkrI | GCNGC | 1 cut(s) | 82 |
| PspEI | GGTNACC | 1 cut(s) | 173 |
| PspN4I | GGNNCC | 2 cut(s) | 339, 439 |
| PspPI | GGNCC | 1 cut(s) | 593 |
| RsaI | GTAC | 4 cut(s) | 31, 158, 545, 615 |
| RsaNI | GTAC | 4 cut(s) | 30, 157, 544, 614 |
| SalI | GTCGAC | 1 cut(s) | 513 |
| SaqAI | TTAA | 2 cut(s) | 165, 575 |
| SatI | GCNGC | 1 cut(s) | 81 |
| Sau3AI | GATC | 4 cut(s) | 10, 15, 43, 504 |
| Sau96I | GGNCC | 1 cut(s) | 593 |
| ScaI | AGTACT | 2 cut(s) | 545, 615 |
| ScrFI | CCNGG | 1 cut(s) | 278 |
| SduI | GDGCHC | 1 cut(s) | 325 |
| SetI | ASST | 7 cut(s) | 55, 72, 128, 154, 294, 443, 598 |
| SfaNI | GCATC | 1 cut(s) | 67 |
| SinI | GGWCC | 1 cut(s) | 593 |
| Sse9I | AATT | 2 cut(s) | 557, 639 |
| SsiI | CCGC | 1 cut(s) | 609 |
| StyD4I | CCNGG | 1 cut(s) | 276 |
| TaaI | ACNGT | 2 cut(s) | 163, 533 |
| TaqI | TCGA | 1 cut(s) | 514 |
| TasI | AATT | 2 cut(s) | 557, 639 |
| TatI | WGTACW | 3 cut(s) | 156, 543, 613 |
| TfiI | GAWTC | 1 cut(s) | 37 |
| Tru1I | TTAA | 2 cut(s) | 165, 575 |
| Tru9I | TTAA | 2 cut(s) | 165, 575 |
| TscAI | CASTG | 1 cut(s) | 332 |
| TseI | GCWGC | 1 cut(s) | 80 |
| TspDTI | ATGAA | 4 cut(s) | 185, 216, 445, 552 |
| TspGWI | ACGGA | 1 cut(s) | 87 |
| TspRI | CASTG | 1 cut(s) | 332 |
| VneI | GTGCAC | 1 cut(s) | 321 |
| VpaK11BI | GGWCC | 1 cut(s) | 593 |
| XapI | RAATTY | 1 cut(s) | 557 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 587 |
| XmiI | GTMKAC | 1 cut(s) | 514 |
| ZrmI | AGTACT | 2 cut(s) | 545, 615 |