Ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| FA_desaturase | PF00487 | 45 - 261 | 7.4e-16 | Fatty acid desaturase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 66 |
| AciI | CCGC | 1 cut(s) | 155 |
| AclI | AACGTT | 1 cut(s) | 415 |
| AclWI | GGATC | 1 cut(s) | 404 |
| AcsI | RAATTY | 1 cut(s) | 613 |
| AcuI | CTGAAG | 2 cut(s) | 266, 830 |
| AfaI | GTAC | 3 cut(s) | 162, 528, 737 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 334, 367, 368, 631, 646 |
| AflII | CTTAAG | 1 cut(s) | 365 |
| AgeI | ACCGGT | 1 cut(s) | 176 |
| AgsI | TTSAA | 5 cut(s) | 229, 299, 460, 758, 803 |
| AleI | CACNNNNGTG | 1 cut(s) | 179 |
| AlwI | GGATC | 1 cut(s) | 404 |
| Ama87I | CYCGRG | 1 cut(s) | 343 |
| ApoI | RAATTY | 1 cut(s) | 613 |
| AsiGI | ACCGGT | 1 cut(s) | 176 |
| AspLEI | GCGC | 1 cut(s) | 269 |
| AsuHPI | GGTGA | 4 cut(s) | 76, 166, 314, 668 |
| AsuNHI | GCTAGC | 1 cut(s) | 691 |
| AvaI | CYCGRG | 1 cut(s) | 343 |
| BaeGI | GKGCMC | 1 cut(s) | 568 |
| BaeI | ACNNNNGTAYC | 1 cut(s) | 900 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 892, 924 |
| BccI | CCATC | 1 cut(s) | 425 |
| BceAI | ACGGC | 1 cut(s) | 452 |
| BciVI | GTATCC | 1 cut(s) | 643 |
| BfaI | CTAG | 2 cut(s) | 75, 692 |
| BfrI | CTTAAG | 1 cut(s) | 365 |
| BfuI | GTATCC | 1 cut(s) | 643 |
| BmcAI | AGTACT | 2 cut(s) | 162, 737 |
| BmeT110I | CYCGRG | 1 cut(s) | 343 |
| BmiI | GGNNCC | 1 cut(s) | 120 |
| BmtI | GCTAGC | 1 cut(s) | 695 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 337, 369, 513, 545 |
| BsaWI | WCCGGW | 1 cut(s) | 176 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 887, 917 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 334, 367, 368, 631, 646 |
| Bse118I | RCCGGY | 2 cut(s) | 31, 176 |
| Bse1I | ACTGG | 3 cut(s) | 328, 573, 658 |
| Bse3DI | GCAATG | 1 cut(s) | 59 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 334, 367, 368, 631, 646 |
| BseMI | GCAATG | 1 cut(s) | 59 |
| BseMII | CTCAG | 2 cut(s) | 753, 831 |
| BseNI | ACTGG | 3 cut(s) | 328, 573, 658 |
| BseSI | GKGCMC | 1 cut(s) | 568 |
| BsgI | GTGCAG | 1 cut(s) | 44 |
| BshTI | ACCGGT | 1 cut(s) | 176 |
| BsiHKCI | CYCGRG | 1 cut(s) | 343 |
| BsiSI | CCGG | 2 cut(s) | 32, 177 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 334, 367, 368, 631, 646 |
| BsmI | GAATGC | 1 cut(s) | 552 |
| BsoBI | CYCGRG | 1 cut(s) | 343 |
| Bsp1286I | GDGCHC | 1 cut(s) | 568 |
| Bsp143I | GATC | 1 cut(s) | 396 |
| BspACI | CCGC | 1 cut(s) | 155 |
| BspCNI | CTCAG | 2 cut(s) | 752, 832 |
| BspLI | GGNNCC | 1 cut(s) | 120 |
| BspOI | GCTAGC | 1 cut(s) | 695 |
| BspPI | GGATC | 1 cut(s) | 404 |
| BspQI | GCTCTTC | 1 cut(s) | 117 |
| BspTI | CTTAAG | 1 cut(s) | 365 |
| BsrDI | GCAATG | 1 cut(s) | 59 |
| BsrFI | RCCGGY | 2 cut(s) | 31, 176 |
| BsrI | ACTGG | 3 cut(s) | 328, 573, 658 |
| BssAI | RCCGGY | 2 cut(s) | 31, 176 |
| BssMI | GATC | 1 cut(s) | 396 |
| Bst4CI | ACNGT | 3 cut(s) | 62, 509, 583 |
| Bst6I | CTCTTC | 1 cut(s) | 117 |
| BstAFI | CTTAAG | 1 cut(s) | 365 |
| BstC8I | GCNNGC | 2 cut(s) | 311, 693 |
| BstDEI | CTNAG | 2 cut(s) | 739, 840 |
| BstHHI | GCGC | 1 cut(s) | 269 |
| BstKTI | GATC | 1 cut(s) | 399 |
| BstMBI | GATC | 1 cut(s) | 396 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 116, 266 |
| BstSLI | GKGCMC | 1 cut(s) | 568 |
| BstX2I | RGATCY | 1 cut(s) | 396 |
| BstYI | RGATCY | 1 cut(s) | 396 |
| BsuI | GTATCC | 1 cut(s) | 643 |
| BtsIMutI | CAGTG | 2 cut(s) | 505, 566 |
| Cac8I | GCNNGC | 2 cut(s) | 311, 693 |
| CfoI | GCGC | 1 cut(s) | 269 |
| Cfr10I | RCCGGY | 2 cut(s) | 31, 176 |
| Csp6I | GTAC | 3 cut(s) | 161, 527, 736 |
| CspAI | ACCGGT | 1 cut(s) | 176 |
| CviAII | CATG | 4 cut(s) | 596, 698, 725, 886 |
| CviQI | GTAC | 3 cut(s) | 161, 527, 736 |
| DdeI | CTNAG | 2 cut(s) | 739, 840 |
| DpnI | GATC | 1 cut(s) | 398 |
| DpnII | GATC | 1 cut(s) | 396 |
| Eam1104I | CTCTTC | 1 cut(s) | 117 |
| EarI | CTCTTC | 1 cut(s) | 117 |
| Eco57I | CTGAAG | 2 cut(s) | 266, 830 |
| Eco88I | CYCGRG | 1 cut(s) | 343 |
| FaeI | CATG | 4 cut(s) | 599, 701, 728, 889 |
| FatI | CATG | 4 cut(s) | 595, 697, 724, 885 |
| FauNDI | CATATG | 1 cut(s) | 629 |
| FblI | GTMKAC | 1 cut(s) | 66 |
| FspBI | CTAG | 2 cut(s) | 75, 692 |
| GlaI | GCGC | 1 cut(s) | 268 |
| HapII | CCGG | 2 cut(s) | 32, 177 |
| HhaI | GCGC | 1 cut(s) | 269 |
| Hin1II | CATG | 4 cut(s) | 599, 701, 728, 889 |
| Hin6I | GCGC | 1 cut(s) | 267 |
| HinP1I | GCGC | 1 cut(s) | 267 |
| HincII | GTYRAC | 1 cut(s) | 67 |
| HindII | GTYRAC | 1 cut(s) | 67 |
| HindIII | AAGCTT | 3 cut(s) | 223, 230, 861 |
| HinfI | GANTC | 2 cut(s) | 319, 853 |
| HpaII | CCGG | 2 cut(s) | 32, 177 |
| HphI | GGTGA | 4 cut(s) | 76, 166, 314, 668 |
| Hpy166II | GTNNAC | 3 cut(s) | 67, 333, 413 |
| Hpy188I | TCNGA | 3 cut(s) | 789, 849, 907 |
| Hpy188III | TCNNGA | 3 cut(s) | 296, 800, 835 |
| Hpy8I | GTNNAC | 3 cut(s) | 67, 333, 413 |
| HpyAV | CCTTC | 3 cut(s) | 208, 698, 894 |
| HpyCH4III | ACNGT | 3 cut(s) | 62, 509, 583 |
| HpyCH4IV | ACGT | 2 cut(s) | 415, 825 |
| HpyCH4V | TGCA | 2 cut(s) | 25, 143 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 116, 266 |
| HpyF3I | CTNAG | 2 cut(s) | 739, 840 |
| HpySE526I | ACGT | 2 cut(s) | 415, 825 |
| Hsp92II | CATG | 4 cut(s) | 599, 701, 728, 889 |
| HspAI | GCGC | 1 cut(s) | 267 |
| Kzo9I | GATC | 1 cut(s) | 396 |
| LguI | GCTCTTC | 1 cut(s) | 117 |
| LmnI | GCTCC | 2 cut(s) | 124, 837 |
| MaeI | CTAG | 2 cut(s) | 75, 692 |
| MaeII | ACGT | 2 cut(s) | 415, 825 |
| MaeIII | GTNAC | 4 cut(s) | 172, 320, 383, 598 |
| MalI | GATC | 1 cut(s) | 398 |
| MboI | GATC | 1 cut(s) | 396 |
| MboII | GAAGA | 4 cut(s) | 104, 247, 476, 862 |
| MfeI | CAATTG | 1 cut(s) | 673 |
| MflI | RGATCY | 1 cut(s) | 396 |
| MhlI | GDGCHC | 1 cut(s) | 568 |
| MluCI | AATT | 4 cut(s) | 613, 673, 768, 804 |
| MlyI | GAGTC | 1 cut(s) | 328 |
| MmeI | TCCRAC | 2 cut(s) | 374, 430 |
| MnlI | CCTC | 6 cut(s) | 42, 303, 363, 372, 536, 889 |
| MseI | TTAA | 2 cut(s) | 366, 828 |
| MslI | CAYNNNNRTG | 1 cut(s) | 179 |
| MspCI | CTTAAG | 1 cut(s) | 365 |
| MspI | CCGG | 2 cut(s) | 32, 177 |
| MunI | CAATTG | 1 cut(s) | 673 |
| Mva1269I | GAATGC | 1 cut(s) | 552 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 116, 266 |
| NdeI | CATATG | 1 cut(s) | 629 |
| NdeII | GATC | 1 cut(s) | 396 |
| NheI | GCTAGC | 1 cut(s) | 691 |
| NlaIII | CATG | 4 cut(s) | 599, 701, 728, 889 |
| NlaIV | GGNNCC | 1 cut(s) | 120 |
| NmuCI | GTSAC | 3 cut(s) | 172, 320, 383 |
| OliI | CACNNNNGTG | 1 cut(s) | 179 |
| PciSI | GCTCTTC | 1 cut(s) | 117 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 341, 614 |
| PctI | GAATGC | 1 cut(s) | 552 |
| PfeI | GAWTC | 1 cut(s) | 853 |
| PinAI | ACCGGT | 1 cut(s) | 176 |
| PleI | GAGTC | 1 cut(s) | 327 |
| PpsI | GAGTC | 1 cut(s) | 327 |
| Psp1406I | AACGTT | 1 cut(s) | 415 |
| PspN4I | GGNNCC | 1 cut(s) | 120 |
| PsuI | RGATCY | 1 cut(s) | 396 |
| RsaI | GTAC | 3 cut(s) | 162, 528, 737 |
| RsaNI | GTAC | 3 cut(s) | 161, 527, 736 |
| RseI | CAYNNNNRTG | 1 cut(s) | 179 |
| SalI | GTCGAC | 1 cut(s) | 65 |
| SapI | GCTCTTC | 1 cut(s) | 117 |
| SaqAI | TTAA | 2 cut(s) | 366, 828 |
| Sau3AI | GATC | 1 cut(s) | 396 |
| ScaI | AGTACT | 2 cut(s) | 162, 737 |
| SchI | GAGTC | 1 cut(s) | 328 |
| SduI | GDGCHC | 1 cut(s) | 568 |
| SgrAI | CRCCGGYG | 1 cut(s) | 176 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 179 |
| SmlI | CTYRAG | 1 cut(s) | 365 |
| SmoI | CTYRAG | 1 cut(s) | 365 |
| Sse9I | AATT | 4 cut(s) | 613, 673, 768, 804 |
| SsiI | CCGC | 1 cut(s) | 155 |
| SspMI | CTAG | 2 cut(s) | 75, 692 |
| TaaI | ACNGT | 3 cut(s) | 62, 509, 583 |
| TaiI | ACGT | 2 cut(s) | 418, 828 |
| TaqI | TCGA | 7 cut(s) | 66, 246, 608, 617, 665, 745, 856 |
| TasI | AATT | 4 cut(s) | 613, 673, 768, 804 |
| TatI | WGTACW | 3 cut(s) | 160, 526, 735 |
| TfiI | GAWTC | 1 cut(s) | 853 |
| Tru1I | TTAA | 2 cut(s) | 366, 828 |
| Tru9I | TTAA | 2 cut(s) | 366, 828 |
| TscAI | CASTG | 2 cut(s) | 512, 573 |
| TseFI | GTSAC | 3 cut(s) | 172, 320, 383 |
| Tsp45I | GTSAC | 3 cut(s) | 172, 320, 383 |
| TspDTI | ATGAA | 1 cut(s) | 263 |
| TspGWI | ACGGA | 1 cut(s) | 350 |
| TspRI | CASTG | 2 cut(s) | 512, 573 |
| Vha464I | CTTAAG | 1 cut(s) | 365 |
| XapI | RAATTY | 1 cut(s) | 613 |
| XmiI | GTMKAC | 1 cut(s) | 66 |
| XspI | CTAG | 2 cut(s) | 75, 692 |
| ZrmI | AGTACT | 2 cut(s) | 162, 737 |