Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 90 - 156 | 8.8e-06 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 367 |
| Acc36I | ACCTGC | 1 cut(s) | 367 |
| AciI | CCGC | 3 cut(s) | 231, 344, 347 |
| AcsI | RAATTY | 2 cut(s) | 211, 251 |
| AgsI | TTSAA | 2 cut(s) | 312, 389 |
| AjnI | CCWGG | 1 cut(s) | 189 |
| AluBI | AGCT | 2 cut(s) | 221, 305 |
| AluI | AGCT | 2 cut(s) | 221, 305 |
| ApeKI | GCWGC | 2 cut(s) | 359, 362 |
| ApoI | RAATTY | 2 cut(s) | 211, 251 |
| AsuHPI | GGTGA | 1 cut(s) | 170 |
| BbvI | GCAGC | 2 cut(s) | 346, 349 |
| BccI | CCATC | 1 cut(s) | 463 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 235, 269 |
| BciT130I | CCWGG | 1 cut(s) | 191 |
| BfuAI | ACCTGC | 1 cut(s) | 367 |
| BglII | AGATCT | 3 cut(s) | 90, 292, 351 |
| BisI | GCNGC | 4 cut(s) | 231, 345, 360, 363 |
| BlsI | GCNGC | 4 cut(s) | 232, 346, 361, 364 |
| Bme1390I | CCNGG | 1 cut(s) | 191 |
| BmrFI | CCNGG | 1 cut(s) | 191 |
| BmsI | GCATC | 2 cut(s) | 418, 475 |
| Bse1I | ACTGG | 1 cut(s) | 60 |
| BseBI | CCWGG | 1 cut(s) | 191 |
| BseGI | GGATG | 1 cut(s) | 471 |
| BseNI | ACTGG | 1 cut(s) | 60 |
| BseRI | GAGGAG | 1 cut(s) | 32 |
| BseXI | GCAGC | 2 cut(s) | 346, 349 |
| BslFI | GGGAC | 1 cut(s) | 79 |
| BsmFI | GGGAC | 1 cut(s) | 79 |
| Bsp143I | GATC | 3 cut(s) | 90, 292, 351 |
| BspACI | CCGC | 3 cut(s) | 231, 344, 347 |
| BspHI | TCATGA | 1 cut(s) | 297 |
| BspMI | ACCTGC | 1 cut(s) | 367 |
| BsrI | ACTGG | 1 cut(s) | 60 |
| BssMI | GATC | 3 cut(s) | 90, 292, 351 |
| Bst2UI | CCWGG | 1 cut(s) | 191 |
| Bst4CI | ACNGT | 2 cut(s) | 70, 140 |
| BstDEI | CTNAG | 1 cut(s) | 234 |
| BstF5I | GGATG | 1 cut(s) | 471 |
| BstKTI | GATC | 3 cut(s) | 93, 295, 354 |
| BstMBI | GATC | 3 cut(s) | 90, 292, 351 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 227 |
| BstNI | CCWGG | 1 cut(s) | 191 |
| BstSCI | CCNGG | 1 cut(s) | 189 |
| BstV1I | GCAGC | 2 cut(s) | 346, 349 |
| BstX2I | RGATCY | 3 cut(s) | 90, 292, 351 |
| BstYI | RGATCY | 3 cut(s) | 90, 292, 351 |
| BtsCI | GGATG | 1 cut(s) | 471 |
| BtsIMutI | CAGTG | 1 cut(s) | 67 |
| BveI | ACCTGC | 1 cut(s) | 367 |
| CciI | TCATGA | 1 cut(s) | 297 |
| CsiI | ACCWGGT | 1 cut(s) | 189 |
| CviAII | CATG | 4 cut(s) | 182, 247, 298, 446 |
| CviJI | RGCY | 2 cut(s) | 221, 305 |
| CviKI_1 | RGCY | 2 cut(s) | 221, 305 |
| DdeI | CTNAG | 1 cut(s) | 234 |
| DpnI | GATC | 3 cut(s) | 92, 294, 353 |
| DpnII | GATC | 3 cut(s) | 90, 292, 351 |
| EciI | GGCGGA | 1 cut(s) | 362 |
| EcoRI | GAATTC | 1 cut(s) | 251 |
| EcoRII | CCWGG | 1 cut(s) | 189 |
| FaeI | CATG | 4 cut(s) | 185, 250, 301, 449 |
| FaiI | YATR | 7 cut(s) | 183, 248, 262, 299, 357, 402, 447 |
| FaqI | GGGAC | 1 cut(s) | 79 |
| FatI | CATG | 4 cut(s) | 181, 246, 297, 445 |
| Fnu4HI | GCNGC | 4 cut(s) | 231, 345, 360, 363 |
| FokI | GGATG | 1 cut(s) | 478 |
| Fsp4HI | GCNGC | 4 cut(s) | 231, 345, 360, 363 |
| GluI | GCNGC | 4 cut(s) | 231, 345, 360, 363 |
| Hin1II | CATG | 4 cut(s) | 185, 250, 301, 449 |
| HinfI | GANTC | 3 cut(s) | 318, 385, 422 |
| HphI | GGTGA | 1 cut(s) | 170 |
| Hpy188I | TCNGA | 4 cut(s) | 225, 323, 411, 427 |
| Hpy188III | TCNNGA | 2 cut(s) | 298, 495 |
| HpyAV | CCTTC | 1 cut(s) | 158 |
| HpyCH4III | ACNGT | 2 cut(s) | 70, 140 |
| HpyCH4V | TGCA | 3 cut(s) | 179, 246, 376 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 227 |
| HpyF3I | CTNAG | 1 cut(s) | 234 |
| Hsp92II | CATG | 4 cut(s) | 185, 250, 301, 449 |
| Kzo9I | GATC | 3 cut(s) | 90, 292, 351 |
| LmnI | GCTCC | 1 cut(s) | 226 |
| LpnPI | CCDG | 6 cut(s) | 73, 176, 203, 362, 378, 480 |
| Lsp1109I | GCAGC | 2 cut(s) | 346, 349 |
| LweI | GCATC | 2 cut(s) | 418, 475 |
| MabI | ACCWGGT | 1 cut(s) | 189 |
| MaeIII | GTNAC | 1 cut(s) | 273 |
| MalI | GATC | 3 cut(s) | 92, 294, 353 |
| MboI | GATC | 3 cut(s) | 90, 292, 351 |
| MboII | GAAGA | 1 cut(s) | 28 |
| MflI | RGATCY | 3 cut(s) | 90, 292, 351 |
| MluCI | AATT | 4 cut(s) | 111, 211, 251, 499 |
| MmeI | TCCRAC | 2 cut(s) | 114, 248 |
| MnlI | CCTC | 5 cut(s) | 50, 53, 234, 317, 453 |
| MseI | TTAA | 2 cut(s) | 11, 502 |
| MspR9I | CCNGG | 1 cut(s) | 191 |
| MvaI | CCWGG | 1 cut(s) | 191 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 227 |
| NdeII | GATC | 3 cut(s) | 90, 292, 351 |
| NlaIII | CATG | 4 cut(s) | 185, 250, 301, 449 |
| PagI | TCATGA | 1 cut(s) | 297 |
| PaqCI | CACCTGC | 1 cut(s) | 367 |
| PfeI | GAWTC | 3 cut(s) | 318, 385, 422 |
| PkrI | GCNGC | 4 cut(s) | 232, 346, 361, 364 |
| Psp6I | CCWGG | 1 cut(s) | 189 |
| PspGI | CCWGG | 1 cut(s) | 189 |
| PsuI | RGATCY | 3 cut(s) | 90, 292, 351 |
| SaqAI | TTAA | 2 cut(s) | 11, 502 |
| SatI | GCNGC | 4 cut(s) | 231, 345, 360, 363 |
| Sau3AI | GATC | 3 cut(s) | 90, 292, 351 |
| ScrFI | CCNGG | 1 cut(s) | 191 |
| SetI | ASST | 8 cut(s) | 26, 169, 195, 223, 245, 307, 381, 464 |
| SexAI | ACCWGGT | 1 cut(s) | 189 |
| SfaNI | GCATC | 2 cut(s) | 418, 475 |
| Sse9I | AATT | 4 cut(s) | 111, 211, 251, 499 |
| SsiI | CCGC | 3 cut(s) | 231, 344, 347 |
| StyD4I | CCNGG | 1 cut(s) | 189 |
| TaaI | ACNGT | 2 cut(s) | 70, 140 |
| TasI | AATT | 4 cut(s) | 111, 211, 251, 499 |
| TauI | GCSGC | 2 cut(s) | 233, 347 |
| TfiI | GAWTC | 3 cut(s) | 318, 385, 422 |
| Tru1I | TTAA | 2 cut(s) | 11, 502 |
| Tru9I | TTAA | 2 cut(s) | 11, 502 |
| TscAI | CASTG | 1 cut(s) | 67 |
| TseI | GCWGC | 2 cut(s) | 359, 362 |
| TspDTI | ATGAA | 5 cut(s) | 71, 177, 297, 389, 434 |
| TspGWI | ACGGA | 1 cut(s) | 20 |
| TspRI | CASTG | 1 cut(s) | 67 |
| XapI | RAATTY | 2 cut(s) | 211, 251 |