Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 38 - 168 | 6.2e-21 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 396 |
| AccII | CGCG | 1 cut(s) | 191 |
| AciI | CCGC | 2 cut(s) | 191, 427 |
| AdeI | CACNNNGTG | 1 cut(s) | 403 |
| AfaI | GTAC | 3 cut(s) | 132, 439, 526 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 51, 95, 215 |
| AflIII | ACRYGT | 1 cut(s) | 521 |
| AgsI | TTSAA | 2 cut(s) | 332, 365 |
| AjnI | CCWGG | 2 cut(s) | 399, 561 |
| Alw26I | GTCTC | 1 cut(s) | 61 |
| AoxI | GGCC | 1 cut(s) | 576 |
| ApeKI | GCWGC | 1 cut(s) | 511 |
| AspS9I | GGNCC | 1 cut(s) | 576 |
| AsuHPI | GGTGA | 1 cut(s) | 121 |
| BaeGI | GKGCMC | 1 cut(s) | 399 |
| BanI | GGYRCC | 1 cut(s) | 396 |
| BbvI | GCAGC | 1 cut(s) | 523 |
| BccI | CCATC | 3 cut(s) | 31, 113, 365 |
| BciT130I | CCWGG | 2 cut(s) | 401, 563 |
| BciVI | GTATCC | 1 cut(s) | 52 |
| BclI | TGATCA | 2 cut(s) | 411, 535 |
| BcoDI | GTCTC | 1 cut(s) | 61 |
| BfaI | CTAG | 2 cut(s) | 231, 580 |
| BfuI | GTATCC | 1 cut(s) | 52 |
| BisI | GCNGC | 2 cut(s) | 428, 512 |
| BlsI | GCNGC | 2 cut(s) | 429, 513 |
| Bme1390I | CCNGG | 2 cut(s) | 401, 563 |
| BmgT120I | GGNCC | 1 cut(s) | 576 |
| BmiI | GGNNCC | 2 cut(s) | 266, 398 |
| BmrFI | CCNGG | 2 cut(s) | 401, 563 |
| BmsI | GCATC | 2 cut(s) | 328, 414 |
| BpmI | CTGGAG | 1 cut(s) | 572 |
| Bpu10I | CCTNAGC | 1 cut(s) | 342 |
| BsaJI | CCNNGG | 1 cut(s) | 461 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 296, 326 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 51, 95, 215 |
| BseBI | CCWGG | 2 cut(s) | 401, 563 |
| BseDI | CCNNGG | 1 cut(s) | 461 |
| BseGI | GGATG | 1 cut(s) | 343 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 51, 95, 215 |
| BseMII | CTCAG | 1 cut(s) | 356 |
| BseSI | GKGCMC | 1 cut(s) | 399 |
| BseXI | GCAGC | 1 cut(s) | 523 |
| BseYI | CCCAGC | 1 cut(s) | 155 |
| Bsh1236I | CGCG | 1 cut(s) | 191 |
| BshFI | GGCC | 1 cut(s) | 578 |
| BshNI | GGYRCC | 1 cut(s) | 396 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 51, 95, 215 |
| BsmAI | GTCTC | 1 cut(s) | 61 |
| BsnI | GGCC | 1 cut(s) | 578 |
| Bsp1286I | GDGCHC | 1 cut(s) | 399 |
| Bsp1407I | TGTACA | 1 cut(s) | 524 |
| Bsp143I | GATC | 2 cut(s) | 411, 535 |
| BspACI | CCGC | 2 cut(s) | 191, 427 |
| BspANI | GGCC | 1 cut(s) | 578 |
| BspCNI | CTCAG | 1 cut(s) | 355 |
| BspFNI | CGCG | 1 cut(s) | 191 |
| BspHI | TCATGA | 1 cut(s) | 16 |
| BspLI | GGNNCC | 2 cut(s) | 266, 398 |
| BspT107I | GGYRCC | 1 cut(s) | 396 |
| BsrGI | TGTACA | 1 cut(s) | 524 |
| BssECI | CCNNGG | 1 cut(s) | 461 |
| BssMI | GATC | 2 cut(s) | 411, 535 |
| BssT1I | CCWWGG | 1 cut(s) | 461 |
| Bst2UI | CCWGG | 2 cut(s) | 401, 563 |
| Bst4CI | ACNGT | 2 cut(s) | 50, 179 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 500 |
| BstAUI | TGTACA | 1 cut(s) | 524 |
| BstDEI | CTNAG | 1 cut(s) | 342 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 93 |
| BstF5I | GGATG | 1 cut(s) | 343 |
| BstFNI | CGCG | 1 cut(s) | 191 |
| BstKTI | GATC | 2 cut(s) | 414, 538 |
| BstMAI | GTCTC | 1 cut(s) | 61 |
| BstMBI | GATC | 2 cut(s) | 411, 535 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 500 |
| BstNI | CCWGG | 2 cut(s) | 401, 563 |
| BstNSI | RCATGY | 2 cut(s) | 239, 525 |
| BstSCI | CCNGG | 2 cut(s) | 399, 561 |
| BstSLI | GKGCMC | 1 cut(s) | 399 |
| BstUI | CGCG | 1 cut(s) | 191 |
| BstV1I | GCAGC | 1 cut(s) | 523 |
| BsuI | GTATCC | 1 cut(s) | 52 |
| BsuRI | GGCC | 1 cut(s) | 578 |
| BtsCI | GGATG | 1 cut(s) | 343 |
| BtsI | GCAGTG | 2 cut(s) | 39, 545 |
| BtsIMutI | CAGTG | 3 cut(s) | 39, 184, 545 |
| CciI | TCATGA | 1 cut(s) | 16 |
| Cfr13I | GGNCC | 1 cut(s) | 576 |
| CsiI | ACCWGGT | 1 cut(s) | 399 |
| Csp6I | GTAC | 3 cut(s) | 131, 438, 525 |
| CviAII | CATG | 7 cut(s) | 17, 236, 258, 282, 485, 522, 528 |
| CviJI | RGCY | 4 cut(s) | 99, 453, 566, 578 |
| CviKI_1 | RGCY | 4 cut(s) | 99, 453, 566, 578 |
| CviQI | GTAC | 3 cut(s) | 131, 438, 525 |
| DdeI | CTNAG | 1 cut(s) | 342 |
| DpnI | GATC | 2 cut(s) | 413, 537 |
| DpnII | GATC | 2 cut(s) | 411, 535 |
| DraIII | CACNNNGTG | 1 cut(s) | 403 |
| Eco130I | CCWWGG | 1 cut(s) | 461 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 93 |
| EcoRII | CCWGG | 2 cut(s) | 399, 561 |
| EcoT14I | CCWWGG | 1 cut(s) | 461 |
| ErhI | CCWWGG | 1 cut(s) | 461 |
| FaeI | CATG | 7 cut(s) | 20, 239, 261, 285, 488, 525, 531 |
| FatI | CATG | 7 cut(s) | 16, 235, 257, 281, 484, 521, 527 |
| FbaI | TGATCA | 2 cut(s) | 411, 535 |
| Fnu4HI | GCNGC | 2 cut(s) | 428, 512 |
| FokI | GGATG | 1 cut(s) | 350 |
| Fsp4HI | GCNGC | 2 cut(s) | 428, 512 |
| FspBI | CTAG | 2 cut(s) | 231, 580 |
| GluI | GCNGC | 2 cut(s) | 428, 512 |
| GsaI | CCCAGC | 1 cut(s) | 159 |
| GsuI | CTGGAG | 1 cut(s) | 572 |
| HaeIII | GGCC | 1 cut(s) | 578 |
| Hin1II | CATG | 7 cut(s) | 20, 239, 261, 285, 488, 525, 531 |
| HinfI | GANTC | 1 cut(s) | 332 |
| HphI | GGTGA | 1 cut(s) | 121 |
| Hpy188I | TCNGA | 3 cut(s) | 269, 337, 535 |
| Hpy188III | TCNNGA | 1 cut(s) | 17 |
| HpyAV | CCTTC | 1 cut(s) | 99 |
| HpyCH4III | ACNGT | 2 cut(s) | 50, 179 |
| HpyCH4V | TGCA | 3 cut(s) | 239, 386, 494 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 500 |
| HpyF3I | CTNAG | 1 cut(s) | 342 |
| Hsp92II | CATG | 7 cut(s) | 20, 239, 261, 285, 488, 525, 531 |
| Ksp22I | TGATCA | 2 cut(s) | 411, 535 |
| Kzo9I | GATC | 2 cut(s) | 411, 535 |
| LmnI | GCTCC | 2 cut(s) | 56, 304 |
| LpnPI | CCDG | 8 cut(s) | 64, 141, 329, 386, 413, 536, 548, 575 |
| Lsp1109I | GCAGC | 1 cut(s) | 523 |
| LweI | GCATC | 2 cut(s) | 328, 414 |
| MabI | ACCWGGT | 1 cut(s) | 399 |
| MaeI | CTAG | 2 cut(s) | 231, 580 |
| MaeIII | GTNAC | 4 cut(s) | 220, 288, 515, 557 |
| MalI | GATC | 2 cut(s) | 413, 537 |
| MboI | GATC | 2 cut(s) | 411, 535 |
| MfeI | CAATTG | 2 cut(s) | 293, 387 |
| MhlI | GDGCHC | 1 cut(s) | 399 |
| MluCI | AATT | 3 cut(s) | 293, 360, 387 |
| MmeI | TCCRAC | 3 cut(s) | 69, 282, 292 |
| MnlI | CCTC | 2 cut(s) | 96, 219 |
| MseI | TTAA | 1 cut(s) | 105 |
| MslI | CAYNNNNRTG | 1 cut(s) | 526 |
| MspR9I | CCNGG | 2 cut(s) | 401, 563 |
| MunI | CAATTG | 2 cut(s) | 293, 387 |
| MvaI | CCWGG | 2 cut(s) | 401, 563 |
| MvnI | CGCG | 1 cut(s) | 191 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 500 |
| NdeII | GATC | 2 cut(s) | 411, 535 |
| NlaIII | CATG | 7 cut(s) | 20, 239, 261, 285, 488, 525, 531 |
| NlaIV | GGNNCC | 2 cut(s) | 266, 398 |
| NmuCI | GTSAC | 1 cut(s) | 220 |
| NspI | RCATGY | 2 cut(s) | 239, 525 |
| PagI | TCATGA | 1 cut(s) | 16 |
| PciI | ACATGT | 1 cut(s) | 521 |
| PfeI | GAWTC | 1 cut(s) | 332 |
| PkrI | GCNGC | 2 cut(s) | 429, 513 |
| PscI | ACATGT | 1 cut(s) | 521 |
| Psp6I | CCWGG | 2 cut(s) | 399, 561 |
| PspFI | CCCAGC | 1 cut(s) | 155 |
| PspGI | CCWGG | 2 cut(s) | 399, 561 |
| PspN4I | GGNNCC | 2 cut(s) | 266, 398 |
| PspPI | GGNCC | 1 cut(s) | 576 |
| RsaI | GTAC | 3 cut(s) | 132, 439, 526 |
| RsaNI | GTAC | 3 cut(s) | 131, 438, 525 |
| RseI | CAYNNNNRTG | 1 cut(s) | 526 |
| SaqAI | TTAA | 1 cut(s) | 105 |
| SatI | GCNGC | 2 cut(s) | 428, 512 |
| Sau3AI | GATC | 2 cut(s) | 411, 535 |
| Sau96I | GGNCC | 1 cut(s) | 576 |
| ScrFI | CCNGG | 2 cut(s) | 401, 563 |
| SduI | GDGCHC | 1 cut(s) | 399 |
| SetI | ASST | 4 cut(s) | 88, 111, 384, 402 |
| SexAI | ACCWGGT | 1 cut(s) | 399 |
| SfaNI | GCATC | 2 cut(s) | 328, 414 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 526 |
| Sse9I | AATT | 3 cut(s) | 293, 360, 387 |
| SsiI | CCGC | 2 cut(s) | 191, 427 |
| SspMI | CTAG | 2 cut(s) | 231, 580 |
| StyD4I | CCNGG | 2 cut(s) | 399, 561 |
| StyI | CCWWGG | 1 cut(s) | 461 |
| TaaI | ACNGT | 2 cut(s) | 50, 179 |
| TasI | AATT | 3 cut(s) | 293, 360, 387 |
| TatI | WGTACW | 2 cut(s) | 437, 524 |
| TauI | GCSGC | 1 cut(s) | 430 |
| TfiI | GAWTC | 1 cut(s) | 332 |
| Tru1I | TTAA | 1 cut(s) | 105 |
| Tru9I | TTAA | 1 cut(s) | 105 |
| TscAI | CASTG | 3 cut(s) | 39, 184, 552 |
| TseFI | GTSAC | 1 cut(s) | 220 |
| TseI | GCWGC | 1 cut(s) | 511 |
| Tsp45I | GTSAC | 1 cut(s) | 220 |
| TspDTI | ATGAA | 1 cut(s) | 501 |
| TspRI | CASTG | 3 cut(s) | 39, 184, 552 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 93 |
| XceI | RCATGY | 2 cut(s) | 239, 525 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 142 |
| XspI | CTAG | 2 cut(s) | 231, 580 |