Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 587 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 130 |
| AccI | GTMKAC | 1 cut(s) | 445 |
| AciI | CCGC | 2 cut(s) | 236, 281 |
| AcsI | RAATTY | 1 cut(s) | 311 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 130, 182 |
| AgsI | TTSAA | 4 cut(s) | 43, 350, 458, 557 |
| AluBI | AGCT | 1 cut(s) | 74 |
| AluI | AGCT | 1 cut(s) | 74 |
| Alw21I | GWGCWC | 1 cut(s) | 100 |
| Alw44I | GTGCAC | 1 cut(s) | 96 |
| Ama87I | CYCGRG | 1 cut(s) | 318 |
| AoxI | GGCC | 1 cut(s) | 243 |
| ApaLI | GTGCAC | 1 cut(s) | 96 |
| ApeKI | GCWGC | 2 cut(s) | 134, 164 |
| ApoI | RAATTY | 1 cut(s) | 311 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 561 |
| AspLEI | GCGC | 2 cut(s) | 203, 505 |
| AspS9I | GGNCC | 1 cut(s) | 244 |
| AsuHPI | GGTGA | 1 cut(s) | 440 |
| AsuII | TTCGAA | 1 cut(s) | 15 |
| AvaI | CYCGRG | 1 cut(s) | 318 |
| BaeGI | GKGCMC | 1 cut(s) | 100 |
| BanII | GRGCYC | 1 cut(s) | 124 |
| Bbv12I | GWGCWC | 1 cut(s) | 100 |
| BbvI | GCAGC | 2 cut(s) | 121, 151 |
| BccI | CCATC | 3 cut(s) | 132, 226, 407 |
| BfaI | CTAG | 1 cut(s) | 512 |
| BfmI | CTRYAG | 1 cut(s) | 540 |
| BfoI | RGCGCY | 1 cut(s) | 204 |
| BisI | GCNGC | 3 cut(s) | 135, 165, 237 |
| BlsI | GCNGC | 3 cut(s) | 136, 166, 238 |
| BmeT110I | CYCGRG | 1 cut(s) | 318 |
| BmgT120I | GGNCC | 1 cut(s) | 244 |
| BmsI | GCATC | 4 cut(s) | 151, 313, 416, 427 |
| Bpu14I | TTCGAA | 1 cut(s) | 15 |
| BsaBI | GATNNNNATC | 1 cut(s) | 417 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 130, 182 |
| Bse1I | ACTGG | 2 cut(s) | 6, 258 |
| Bse8I | GATNNNNATC | 1 cut(s) | 417 |
| BseGI | GGATG | 2 cut(s) | 312, 328 |
| BseJI | GATNNNNATC | 1 cut(s) | 417 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 130, 182 |
| BseNI | ACTGG | 2 cut(s) | 6, 258 |
| BseRI | GAGGAG | 1 cut(s) | 454 |
| BseSI | GKGCMC | 1 cut(s) | 100 |
| BseXI | GCAGC | 2 cut(s) | 121, 151 |
| BshFI | GGCC | 1 cut(s) | 245 |
| BsiHKAI | GWGCWC | 1 cut(s) | 100 |
| BsiHKCI | CYCGRG | 1 cut(s) | 318 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 130, 182 |
| BsnI | GGCC | 1 cut(s) | 245 |
| BsoBI | CYCGRG | 1 cut(s) | 318 |
| Bsp119I | TTCGAA | 1 cut(s) | 15 |
| Bsp1286I | GDGCHC | 2 cut(s) | 100, 124 |
| Bsp143I | GATC | 1 cut(s) | 285 |
| BspACI | CCGC | 2 cut(s) | 236, 281 |
| BspANI | GGCC | 1 cut(s) | 245 |
| BspT104I | TTCGAA | 1 cut(s) | 15 |
| BsrI | ACTGG | 2 cut(s) | 6, 258 |
| BssMI | GATC | 1 cut(s) | 285 |
| Bst4CI | ACNGT | 1 cut(s) | 26 |
| Bst6I | CTCTTC | 2 cut(s) | 12, 390 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 521 |
| BstBI | TTCGAA | 1 cut(s) | 15 |
| BstC8I | GCNNGC | 1 cut(s) | 522 |
| BstF5I | GGATG | 2 cut(s) | 312, 328 |
| BstH2I | RGCGCY | 1 cut(s) | 204 |
| BstHHI | GCGC | 2 cut(s) | 203, 505 |
| BstKTI | GATC | 1 cut(s) | 288 |
| BstMBI | GATC | 1 cut(s) | 285 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 242, 323, 521 |
| BstNSI | RCATGY | 2 cut(s) | 281, 524 |
| BstSFI | CTRYAG | 1 cut(s) | 540 |
| BstSLI | GKGCMC | 1 cut(s) | 100 |
| BstV1I | GCAGC | 2 cut(s) | 121, 151 |
| BsuRI | GGCC | 1 cut(s) | 245 |
| BtsCI | GGATG | 2 cut(s) | 312, 328 |
| BtsIMutI | CAGTG | 1 cut(s) | 265 |
| Cac8I | GCNNGC | 1 cut(s) | 522 |
| CfoI | GCGC | 2 cut(s) | 203, 505 |
| Cfr13I | GGNCC | 1 cut(s) | 244 |
| CviAII | CATG | 5 cut(s) | 54, 278, 289, 521, 598 |
| CviJI | RGCY | 5 cut(s) | 74, 122, 134, 239, 245 |
| CviKI_1 | RGCY | 5 cut(s) | 74, 122, 134, 239, 245 |
| DpnI | GATC | 1 cut(s) | 287 |
| DpnII | GATC | 1 cut(s) | 285 |
| Eam1104I | CTCTTC | 2 cut(s) | 12, 390 |
| EarI | CTCTTC | 2 cut(s) | 12, 390 |
| Eco24I | GRGCYC | 1 cut(s) | 124 |
| Eco88I | CYCGRG | 1 cut(s) | 318 |
| EcoT38I | GRGCYC | 1 cut(s) | 124 |
| FaeI | CATG | 5 cut(s) | 57, 281, 292, 524, 601 |
| FatI | CATG | 5 cut(s) | 53, 277, 288, 520, 597 |
| FblI | GTMKAC | 1 cut(s) | 445 |
| Fnu4HI | GCNGC | 3 cut(s) | 135, 165, 237 |
| FokI | GGATG | 2 cut(s) | 319, 335 |
| FriOI | GRGCYC | 1 cut(s) | 124 |
| Fsp4HI | GCNGC | 3 cut(s) | 135, 165, 237 |
| FspBI | CTAG | 1 cut(s) | 512 |
| GlaI | GCGC | 2 cut(s) | 202, 504 |
| GluI | GCNGC | 3 cut(s) | 135, 165, 237 |
| HaeII | RGCGCY | 1 cut(s) | 204 |
| HaeIII | GGCC | 1 cut(s) | 245 |
| HhaI | GCGC | 2 cut(s) | 203, 505 |
| Hin1II | CATG | 5 cut(s) | 57, 281, 292, 524, 601 |
| Hin6I | GCGC | 2 cut(s) | 201, 503 |
| HinP1I | GCGC | 2 cut(s) | 201, 503 |
| HincII | GTYRAC | 1 cut(s) | 493 |
| HindII | GTYRAC | 1 cut(s) | 493 |
| HinfI | GANTC | 6 cut(s) | 12, 350, 356, 398, 442, 578 |
| HpaI | GTTAAC | 1 cut(s) | 493 |
| HphI | GGTGA | 1 cut(s) | 440 |
| Hpy166II | GTNNAC | 3 cut(s) | 98, 446, 493 |
| Hpy188I | TCNGA | 2 cut(s) | 355, 412 |
| Hpy188III | TCNNGA | 3 cut(s) | 176, 304, 320 |
| Hpy8I | GTNNAC | 3 cut(s) | 98, 446, 493 |
| HpyAV | CCTTC | 2 cut(s) | 257, 577 |
| HpyCH4III | ACNGT | 1 cut(s) | 26 |
| HpyCH4V | TGCA | 1 cut(s) | 98 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 242, 323, 521 |
| Hsp92II | CATG | 5 cut(s) | 57, 281, 292, 524, 601 |
| HspAI | GCGC | 2 cut(s) | 201, 503 |
| KspAI | GTTAAC | 1 cut(s) | 493 |
| Kzo9I | GATC | 1 cut(s) | 285 |
| LpnPI | CCDG | 6 cut(s) | 19, 123, 168, 271, 312, 556 |
| Lsp1109I | GCAGC | 2 cut(s) | 121, 151 |
| LweI | GCATC | 4 cut(s) | 151, 313, 416, 427 |
| MaeI | CTAG | 1 cut(s) | 512 |
| MaeIII | GTNAC | 3 cut(s) | 28, 35, 544 |
| MalI | GATC | 1 cut(s) | 287 |
| MboI | GATC | 1 cut(s) | 285 |
| MboII | GAAGA | 5 cut(s) | 29, 327, 407, 470, 569 |
| MhlI | GDGCHC | 2 cut(s) | 100, 124 |
| MluCI | AATT | 5 cut(s) | 195, 311, 345, 529, 582 |
| MlyI | GAGTC | 2 cut(s) | 407, 451 |
| MmeI | TCCRAC | 1 cut(s) | 555 |
| MnlI | CCTC | 6 cut(s) | 76, 261, 277, 385, 432, 479 |
| MroXI | GAANNNNTTC | 1 cut(s) | 561 |
| MseI | TTAA | 6 cut(s) | 114, 344, 435, 492, 528, 613 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 242, 323, 521 |
| NdeII | GATC | 1 cut(s) | 285 |
| NlaIII | CATG | 5 cut(s) | 57, 281, 292, 524, 601 |
| NmuCI | GTSAC | 2 cut(s) | 28, 35 |
| NspI | RCATGY | 2 cut(s) | 281, 524 |
| NspV | TTCGAA | 1 cut(s) | 15 |
| PaeI | GCATGC | 1 cut(s) | 524 |
| PdmI | GAANNNNTTC | 1 cut(s) | 561 |
| PfeI | GAWTC | 4 cut(s) | 12, 350, 356, 578 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 130 |
| PkrI | GCNGC | 3 cut(s) | 136, 166, 238 |
| PleI | GAGTC | 2 cut(s) | 406, 450 |
| PpsI | GAGTC | 2 cut(s) | 406, 450 |
| PsiI | TTATAA | 1 cut(s) | 587 |
| PspPI | GGNCC | 1 cut(s) | 244 |
| SaqAI | TTAA | 6 cut(s) | 114, 344, 435, 492, 528, 613 |
| SatI | GCNGC | 3 cut(s) | 135, 165, 237 |
| Sau3AI | GATC | 1 cut(s) | 285 |
| Sau96I | GGNCC | 1 cut(s) | 244 |
| SchI | GAGTC | 2 cut(s) | 407, 451 |
| SduI | GDGCHC | 2 cut(s) | 100, 124 |
| SetI | ASST | 3 cut(s) | 76, 187, 269 |
| SfaNI | GCATC | 4 cut(s) | 151, 313, 416, 427 |
| SfcI | CTRYAG | 1 cut(s) | 540 |
| SfuI | TTCGAA | 1 cut(s) | 15 |
| SphI | GCATGC | 1 cut(s) | 524 |
| Sse9I | AATT | 5 cut(s) | 195, 311, 345, 529, 582 |
| SsiI | CCGC | 2 cut(s) | 236, 281 |
| SspMI | CTAG | 1 cut(s) | 512 |
| TaaI | ACNGT | 1 cut(s) | 26 |
| TaqI | TCGA | 2 cut(s) | 10, 15 |
| TasI | AATT | 5 cut(s) | 195, 311, 345, 529, 582 |
| TauI | GCSGC | 1 cut(s) | 239 |
| TfiI | GAWTC | 4 cut(s) | 12, 350, 356, 578 |
| Tru1I | TTAA | 6 cut(s) | 114, 344, 435, 492, 528, 613 |
| Tru9I | TTAA | 6 cut(s) | 114, 344, 435, 492, 528, 613 |
| TscAI | CASTG | 1 cut(s) | 265 |
| TseFI | GTSAC | 2 cut(s) | 28, 35 |
| TseI | GCWGC | 2 cut(s) | 134, 164 |
| Tsp45I | GTSAC | 2 cut(s) | 28, 35 |
| TspDTI | ATGAA | 1 cut(s) | 323 |
| TspRI | CASTG | 1 cut(s) | 265 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 130 |
| VneI | GTGCAC | 1 cut(s) | 96 |
| XapI | RAATTY | 1 cut(s) | 311 |
| XceI | RCATGY | 2 cut(s) | 281, 524 |
| XmiI | GTMKAC | 1 cut(s) | 445 |
| XmnI | GAANNNNTTC | 1 cut(s) | 561 |
| XspI | CTAG | 1 cut(s) | 512 |