Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 131 |
| AcsI | RAATTY | 2 cut(s) | 288, 303 |
| AfaI | GTAC | 1 cut(s) | 358 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 131 |
| AflII | CTTAAG | 1 cut(s) | 274 |
| AgsI | TTSAA | 2 cut(s) | 185, 440 |
| AluBI | AGCT | 1 cut(s) | 317 |
| AluI | AGCT | 1 cut(s) | 317 |
| AoxI | GGCC | 1 cut(s) | 178 |
| ApeKI | GCWGC | 2 cut(s) | 110, 239 |
| ApoI | RAATTY | 2 cut(s) | 288, 303 |
| AseI | ATTAAT | 1 cut(s) | 27 |
| BbsI | GAAGAC | 1 cut(s) | 435 |
| BbvI | GCAGC | 2 cut(s) | 122, 251 |
| BccI | CCATC | 2 cut(s) | 244, 278 |
| BfrI | CTTAAG | 1 cut(s) | 274 |
| BisI | GCNGC | 2 cut(s) | 111, 240 |
| BlsI | GCNGC | 2 cut(s) | 112, 241 |
| BmsI | GCATC | 2 cut(s) | 220, 256 |
| BpiI | GAAGAC | 1 cut(s) | 435 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 131 |
| Bse1I | ACTGG | 2 cut(s) | 125, 259 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 131 |
| BseNI | ACTGG | 2 cut(s) | 125, 259 |
| BseXI | GCAGC | 2 cut(s) | 122, 251 |
| BshFI | GGCC | 1 cut(s) | 180 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 131 |
| BsnI | GGCC | 1 cut(s) | 180 |
| BspANI | GGCC | 1 cut(s) | 180 |
| BspTI | CTTAAG | 1 cut(s) | 274 |
| BsrI | ACTGG | 2 cut(s) | 125, 259 |
| Bst6I | CTCTTC | 1 cut(s) | 93 |
| BstAFI | CTTAAG | 1 cut(s) | 274 |
| BstDEI | CTNAG | 1 cut(s) | 199 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 239 |
| BstNSI | RCATGY | 2 cut(s) | 139, 390 |
| BstV1I | GCAGC | 2 cut(s) | 122, 251 |
| BstV2I | GAAGAC | 1 cut(s) | 435 |
| BsuRI | GGCC | 1 cut(s) | 180 |
| BtsIMutI | CAGTG | 3 cut(s) | 132, 153, 266 |
| Csp6I | GTAC | 1 cut(s) | 357 |
| CviAII | CATG | 3 cut(s) | 136, 368, 387 |
| CviJI | RGCY | 5 cut(s) | 41, 180, 254, 317, 374 |
| CviKI_1 | RGCY | 5 cut(s) | 41, 180, 254, 317, 374 |
| CviQI | GTAC | 1 cut(s) | 357 |
| DdeI | CTNAG | 1 cut(s) | 199 |
| DraI | TTTAAA | 2 cut(s) | 22, 45 |
| Eam1104I | CTCTTC | 1 cut(s) | 93 |
| EarI | CTCTTC | 1 cut(s) | 93 |
| FaeI | CATG | 3 cut(s) | 139, 371, 390 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 420, 452 |
| FatI | CATG | 3 cut(s) | 135, 367, 386 |
| Fnu4HI | GCNGC | 2 cut(s) | 111, 240 |
| Fsp4HI | GCNGC | 2 cut(s) | 111, 240 |
| GluI | GCNGC | 2 cut(s) | 111, 240 |
| HaeIII | GGCC | 1 cut(s) | 180 |
| Hin1II | CATG | 3 cut(s) | 139, 371, 390 |
| HinfI | GANTC | 2 cut(s) | 69, 224 |
| Hpy166II | GTNNAC | 2 cut(s) | 34, 141 |
| Hpy188I | TCNGA | 3 cut(s) | 74, 173, 229 |
| Hpy8I | GTNNAC | 2 cut(s) | 34, 141 |
| HpyAV | CCTTC | 1 cut(s) | 191 |
| HpyCH4V | TGCA | 6 cut(s) | 110, 167, 208, 233, 269, 386 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 239 |
| HpyF3I | CTNAG | 1 cut(s) | 199 |
| Hsp92II | CATG | 3 cut(s) | 139, 371, 390 |
| LpnPI | CCDG | 3 cut(s) | 138, 272, 293 |
| Lsp1109I | GCAGC | 2 cut(s) | 122, 251 |
| LweI | GCATC | 2 cut(s) | 220, 256 |
| MaeIII | GTNAC | 1 cut(s) | 457 |
| MboII | GAAGA | 2 cut(s) | 110, 440 |
| MluCI | AATT | 6 cut(s) | 14, 24, 158, 288, 303, 319 |
| MlyI | GAGTC | 2 cut(s) | 63, 233 |
| MmeI | TCCRAC | 1 cut(s) | 405 |
| MnlI | CCTC | 3 cut(s) | 15, 59, 363 |
| MseI | TTAA | 5 cut(s) | 21, 27, 44, 275, 484 |
| MspCI | CTTAAG | 1 cut(s) | 274 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 239 |
| NlaIII | CATG | 3 cut(s) | 139, 371, 390 |
| NspI | RCATGY | 2 cut(s) | 139, 390 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 131 |
| PkrI | GCNGC | 2 cut(s) | 112, 241 |
| PleI | GAGTC | 2 cut(s) | 63, 232 |
| PpsI | GAGTC | 2 cut(s) | 63, 232 |
| PshBI | ATTAAT | 1 cut(s) | 27 |
| RsaI | GTAC | 1 cut(s) | 358 |
| RsaNI | GTAC | 1 cut(s) | 357 |
| SaqAI | TTAA | 5 cut(s) | 21, 27, 44, 275, 484 |
| SatI | GCNGC | 2 cut(s) | 111, 240 |
| SchI | GAGTC | 2 cut(s) | 63, 233 |
| SetI | ASST | 4 cut(s) | 312, 319, 355, 414 |
| SfaNI | GCATC | 2 cut(s) | 220, 256 |
| SmlI | CTYRAG | 1 cut(s) | 274 |
| SmoI | CTYRAG | 1 cut(s) | 274 |
| Sse9I | AATT | 6 cut(s) | 14, 24, 158, 288, 303, 319 |
| TaqI | TCGA | 1 cut(s) | 349 |
| TasI | AATT | 6 cut(s) | 14, 24, 158, 288, 303, 319 |
| Tru1I | TTAA | 5 cut(s) | 21, 27, 44, 275, 484 |
| Tru9I | TTAA | 5 cut(s) | 21, 27, 44, 275, 484 |
| TscAI | CASTG | 3 cut(s) | 132, 160, 266 |
| TseI | GCWGC | 2 cut(s) | 110, 239 |
| TspDTI | ATGAA | 3 cut(s) | 312, 315, 317 |
| TspGWI | ACGGA | 1 cut(s) | 447 |
| TspRI | CASTG | 3 cut(s) | 132, 160, 266 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 131 |
| Vha464I | CTTAAG | 1 cut(s) | 274 |
| VspI | ATTAAT | 1 cut(s) | 27 |
| XapI | RAATTY | 2 cut(s) | 288, 303 |
| XceI | RCATGY | 2 cut(s) | 139, 390 |