ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 170, 603 |
| AclWI | GGATC | 1 cut(s) | 334 |
| AcsI | RAATTY | 1 cut(s) | 402 |
| AfaI | GTAC | 2 cut(s) | 10, 334 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 224, 378, 503, 591 |
| AgsI | TTSAA | 4 cut(s) | 85, 117, 200, 401 |
| AhlI | ACTAGT | 1 cut(s) | 656 |
| AjnI | CCWGG | 1 cut(s) | 584 |
| AluBI | AGCT | 6 cut(s) | 38, 224, 410, 437, 580, 755 |
| AluI | AGCT | 6 cut(s) | 38, 224, 410, 437, 580, 755 |
| Alw26I | GTCTC | 1 cut(s) | 469 |
| AlwI | GGATC | 1 cut(s) | 334 |
| ApeKI | GCWGC | 2 cut(s) | 755, 773 |
| ApoI | RAATTY | 1 cut(s) | 402 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 204 |
| AspLEI | GCGC | 1 cut(s) | 144 |
| AsuHPI | GGTGA | 2 cut(s) | 65, 359 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 234, 267 |
| BbsI | GAAGAC | 2 cut(s) | 389, 536 |
| BbvI | GCAGC | 1 cut(s) | 742 |
| BccI | CCATC | 3 cut(s) | 9, 76, 661 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 527, 561 |
| BciT130I | CCWGG | 1 cut(s) | 586 |
| BcoDI | GTCTC | 1 cut(s) | 469 |
| BcuI | ACTAGT | 1 cut(s) | 656 |
| BfaI | CTAG | 5 cut(s) | 12, 221, 657, 768, 781 |
| BisI | GCNGC | 2 cut(s) | 756, 774 |
| BlsI | GCNGC | 2 cut(s) | 757, 775 |
| Bme1390I | CCNGG | 1 cut(s) | 586 |
| BmiI | GGNNCC | 2 cut(s) | 618, 750 |
| BmrFI | CCNGG | 1 cut(s) | 586 |
| BmrI | ACTGGG | 1 cut(s) | 615 |
| BmsI | GCATC | 2 cut(s) | 148, 717 |
| BmuI | ACTGGG | 1 cut(s) | 615 |
| BpiI | GAAGAC | 2 cut(s) | 389, 536 |
| BsaJI | CCNNGG | 1 cut(s) | 74 |
| BsaWI | WCCGGW | 1 cut(s) | 121 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 10, 24, 40, 54 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 224, 378, 503, 591 |
| Bse1I | ACTGG | 2 cut(s) | 340, 621 |
| BseBI | CCWGG | 1 cut(s) | 586 |
| BseDI | CCNNGG | 1 cut(s) | 74 |
| BseGI | GGATG | 3 cut(s) | 163, 199, 672 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 224, 378, 503, 591 |
| BseNI | ACTGG | 2 cut(s) | 340, 621 |
| BseXI | GCAGC | 1 cut(s) | 742 |
| BsiSI | CCGG | 1 cut(s) | 122 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 224, 378, 503, 591 |
| BsmAI | GTCTC | 1 cut(s) | 469 |
| BsmBI | CGTCTC | 1 cut(s) | 469 |
| BsmI | GAATGC | 1 cut(s) | 361 |
| Bsp143I | GATC | 1 cut(s) | 326 |
| Bsp19I | CCATGG | 1 cut(s) | 74 |
| BspLI | GGNNCC | 2 cut(s) | 618, 750 |
| BspPI | GGATC | 1 cut(s) | 334 |
| BsrI | ACTGG | 2 cut(s) | 340, 621 |
| BssECI | CCNNGG | 1 cut(s) | 74 |
| BssMI | GATC | 1 cut(s) | 326 |
| BssT1I | CCWWGG | 1 cut(s) | 74 |
| Bst2UI | CCWGG | 1 cut(s) | 586 |
| Bst4CI | ACNGT | 2 cut(s) | 263, 283 |
| BstC8I | GCNNGC | 1 cut(s) | 439 |
| BstDSI | CCRYGG | 1 cut(s) | 74 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 589 |
| BstF5I | GGATG | 3 cut(s) | 163, 199, 672 |
| BstHHI | GCGC | 1 cut(s) | 144 |
| BstKTI | GATC | 1 cut(s) | 329 |
| BstMAI | GTCTC | 1 cut(s) | 469 |
| BstMBI | GATC | 1 cut(s) | 326 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 764, 773 |
| BstNI | CCWGG | 1 cut(s) | 586 |
| BstNSI | RCATGY | 1 cut(s) | 647 |
| BstSCI | CCNGG | 1 cut(s) | 584 |
| BstV1I | GCAGC | 1 cut(s) | 742 |
| BstV2I | GAAGAC | 2 cut(s) | 389, 536 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 75 |
| BtgI | CCRYGG | 1 cut(s) | 74 |
| BtgZI | GCGATG | 1 cut(s) | 54 |
| BtsCI | GGATG | 3 cut(s) | 163, 199, 672 |
| BtsI | GCAGTG | 1 cut(s) | 693 |
| BtsIMutI | CAGTG | 2 cut(s) | 493, 693 |
| Cac8I | GCNNGC | 1 cut(s) | 439 |
| CfoI | GCGC | 1 cut(s) | 144 |
| CsiI | ACCWGGT | 1 cut(s) | 584 |
| Csp6I | GTAC | 2 cut(s) | 9, 333 |
| CviAII | CATG | 4 cut(s) | 75, 99, 644, 731 |
| CviJI | RGCY | 9 cut(s) | 38, 224, 410, 437, 558, 580, 703, 755, 767 |
| CviKI_1 | RGCY | 9 cut(s) | 38, 224, 410, 437, 558, 580, 703, 755, 767 |
| CviQI | GTAC | 2 cut(s) | 9, 333 |
| DpnI | GATC | 1 cut(s) | 328 |
| DpnII | GATC | 1 cut(s) | 326 |
| Eco130I | CCWWGG | 1 cut(s) | 74 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 589 |
| EcoRII | CCWGG | 1 cut(s) | 584 |
| EcoT14I | CCWWGG | 1 cut(s) | 74 |
| EcoT22I | ATGCAT | 2 cut(s) | 645, 732 |
| ErhI | CCWWGG | 1 cut(s) | 74 |
| Esp3I | CGTCTC | 1 cut(s) | 469 |
| FaeI | CATG | 4 cut(s) | 78, 102, 647, 734 |
| FatI | CATG | 4 cut(s) | 74, 98, 643, 730 |
| Fnu4HI | GCNGC | 2 cut(s) | 756, 774 |
| FokI | GGATG | 3 cut(s) | 170, 206, 679 |
| Fsp4HI | GCNGC | 2 cut(s) | 756, 774 |
| FspBI | CTAG | 5 cut(s) | 12, 221, 657, 768, 781 |
| GlaI | GCGC | 1 cut(s) | 143 |
| GluI | GCNGC | 2 cut(s) | 756, 774 |
| HapII | CCGG | 1 cut(s) | 122 |
| HhaI | GCGC | 1 cut(s) | 144 |
| Hin1II | CATG | 4 cut(s) | 78, 102, 647, 734 |
| Hin6I | GCGC | 1 cut(s) | 142 |
| HinP1I | GCGC | 1 cut(s) | 142 |
| HincII | GTYRAC | 1 cut(s) | 693 |
| HindII | GTYRAC | 1 cut(s) | 693 |
| HindIII | AAGCTT | 2 cut(s) | 435, 578 |
| HinfI | GANTC | 2 cut(s) | 394, 527 |
| HpaI | GTTAAC | 1 cut(s) | 693 |
| HpaII | CCGG | 1 cut(s) | 122 |
| HphI | GGTGA | 2 cut(s) | 65, 359 |
| Hpy166II | GTNNAC | 2 cut(s) | 493, 693 |
| Hpy8I | GTNNAC | 2 cut(s) | 493, 693 |
| HpyCH4III | ACNGT | 2 cut(s) | 263, 283 |
| HpyCH4V | TGCA | 6 cut(s) | 161, 538, 563, 643, 686, 730 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 764, 773 |
| Hsp92II | CATG | 4 cut(s) | 78, 102, 647, 734 |
| HspAI | GCGC | 1 cut(s) | 142 |
| KspAI | GTTAAC | 1 cut(s) | 693 |
| Kzo9I | GATC | 1 cut(s) | 326 |
| Lsp1109I | GCAGC | 1 cut(s) | 742 |
| LweI | GCATC | 2 cut(s) | 148, 717 |
| MabI | ACCWGGT | 1 cut(s) | 584 |
| MaeI | CTAG | 5 cut(s) | 12, 221, 657, 768, 781 |
| MaeIII | GTNAC | 1 cut(s) | 91 |
| MalI | GATC | 1 cut(s) | 328 |
| MboI | GATC | 1 cut(s) | 326 |
| MboII | GAAGA | 2 cut(s) | 389, 536 |
| MluCI | AATT | 3 cut(s) | 178, 402, 569 |
| MlyI | GAGTC | 1 cut(s) | 403 |
| MmeI | TCCRAC | 1 cut(s) | 654 |
| MnlI | CCTC | 5 cut(s) | 12, 228, 517, 585, 702 |
| Mph1103I | ATGCAT | 2 cut(s) | 645, 732 |
| MroXI | GAANNNNTTC | 1 cut(s) | 204 |
| MseI | TTAA | 3 cut(s) | 177, 285, 692 |
| MslI | CAYNNNNRTG | 2 cut(s) | 73, 486 |
| MspA1I | CMGCKG | 1 cut(s) | 755 |
| MspI | CCGG | 1 cut(s) | 122 |
| MspR9I | CCNGG | 1 cut(s) | 586 |
| Mva1269I | GAATGC | 1 cut(s) | 361 |
| MvaI | CCWGG | 1 cut(s) | 586 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 764, 773 |
| NcoI | CCATGG | 1 cut(s) | 74 |
| NdeII | GATC | 1 cut(s) | 326 |
| NlaIII | CATG | 4 cut(s) | 78, 102, 647, 734 |
| NlaIV | GGNNCC | 2 cut(s) | 618, 750 |
| NsiI | ATGCAT | 2 cut(s) | 645, 732 |
| NspI | RCATGY | 1 cut(s) | 647 |
| PctI | GAATGC | 1 cut(s) | 361 |
| PdmI | GAANNNNTTC | 1 cut(s) | 204 |
| PfeI | GAWTC | 1 cut(s) | 527 |
| PkrI | GCNGC | 2 cut(s) | 757, 775 |
| PleI | GAGTC | 1 cut(s) | 402 |
| PpsI | GAGTC | 1 cut(s) | 402 |
| PsiI | TTATAA | 2 cut(s) | 170, 603 |
| Psp6I | CCWGG | 1 cut(s) | 584 |
| PspGI | CCWGG | 1 cut(s) | 584 |
| PspN4I | GGNNCC | 2 cut(s) | 618, 750 |
| PvuII | CAGCTG | 1 cut(s) | 755 |
| RsaI | GTAC | 2 cut(s) | 10, 334 |
| RsaNI | GTAC | 2 cut(s) | 9, 333 |
| RseI | CAYNNNNRTG | 2 cut(s) | 73, 486 |
| SaqAI | TTAA | 3 cut(s) | 177, 285, 692 |
| SatI | GCNGC | 2 cut(s) | 756, 774 |
| Sau3AI | GATC | 1 cut(s) | 326 |
| SchI | GAGTC | 1 cut(s) | 403 |
| ScrFI | CCNGG | 1 cut(s) | 586 |
| SexAI | ACCWGGT | 1 cut(s) | 584 |
| SfaNI | GCATC | 2 cut(s) | 148, 717 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 73, 486 |
| SpeI | ACTAGT | 1 cut(s) | 656 |
| Sse9I | AATT | 3 cut(s) | 178, 402, 569 |
| SspI | AATATT | 1 cut(s) | 205 |
| SspMI | CTAG | 5 cut(s) | 12, 221, 657, 768, 781 |
| StyD4I | CCNGG | 1 cut(s) | 584 |
| StyI | CCWWGG | 1 cut(s) | 74 |
| TaaI | ACNGT | 2 cut(s) | 263, 283 |
| TasI | AATT | 3 cut(s) | 178, 402, 569 |
| TfiI | GAWTC | 1 cut(s) | 527 |
| Tru1I | TTAA | 3 cut(s) | 177, 285, 692 |
| Tru9I | TTAA | 3 cut(s) | 177, 285, 692 |
| TscAI | CASTG | 2 cut(s) | 493, 693 |
| TseI | GCWGC | 2 cut(s) | 755, 773 |
| TspRI | CASTG | 2 cut(s) | 493, 693 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 589 |
| XapI | RAATTY | 1 cut(s) | 402 |
| XceI | RCATGY | 1 cut(s) | 647 |
| XmnI | GAANNNNTTC | 1 cut(s) | 204 |
| XspI | CTAG | 5 cut(s) | 12, 221, 657, 768, 781 |
| Zsp2I | ATGCAT | 2 cut(s) | 645, 732 |