No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G78995 |
| fragaria_vesca | FvH4_6g36350 FvH4_6g36350 |
| malus_domestica | MD09G1169800.v1.1 |
| prunus_persica | Prupe.3G028000_v2.0.a1 |
| pyrus_communis | pycom09g08730 |
| rosa_chinensis | RchiOBHm_Chr2g0148351 |
| rosa_laevigata | RLG00000020342 |
| rosa_multiflora | Rmu_sc0011136.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00098840 |
| rosa_rugosa | Rorug02G0406000 Rorug02G0406000 |
| rosa_samantha | Rh2AG465100 Rh2BG477700 Rh2CG451500 Rh2DG486600 |
| rosa_wichuraiana | Rw2G037900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 146, 308 |
| AcuI | CTGAAG | 1 cut(s) | 150 |
| AdeI | CACNNNGTG | 1 cut(s) | 368 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 206, 371 |
| AgsI | TTSAA | 3 cut(s) | 287, 382, 409 |
| AjnI | CCWGG | 1 cut(s) | 364 |
| AluBI | AGCT | 4 cut(s) | 97, 128, 164, 278 |
| AluI | AGCT | 4 cut(s) | 97, 128, 164, 278 |
| Alw21I | GWGCWC | 1 cut(s) | 452 |
| AoxI | GGCC | 3 cut(s) | 181, 373, 488 |
| ApeKI | GCWGC | 3 cut(s) | 149, 152, 170 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 88 |
| AspS9I | GGNCC | 2 cut(s) | 374, 488 |
| AsuHPI | GGTGA | 5 cut(s) | 221, 257, 354, 380, 491 |
| BbsI | GAAGAC | 2 cut(s) | 68, 397 |
| Bbv12I | GWGCWC | 1 cut(s) | 452 |
| BbvI | GCAGC | 3 cut(s) | 136, 139, 182 |
| BccI | CCATC | 2 cut(s) | 470, 479 |
| BceAI | ACGGC | 1 cut(s) | 411 |
| BciT130I | CCWGG | 1 cut(s) | 366 |
| BfaI | CTAG | 1 cut(s) | 218 |
| BfmI | CTRYAG | 3 cut(s) | 132, 153, 396 |
| BisI | GCNGC | 4 cut(s) | 147, 150, 153, 171 |
| BlsI | GCNGC | 4 cut(s) | 148, 151, 154, 172 |
| Bme1390I | CCNGG | 1 cut(s) | 366 |
| BmgT120I | GGNCC | 2 cut(s) | 374, 488 |
| BmiI | GGNNCC | 1 cut(s) | 376 |
| BmrFI | CCNGG | 1 cut(s) | 366 |
| BmsI | GCATC | 1 cut(s) | 81 |
| BpiI | GAAGAC | 2 cut(s) | 68, 397 |
| BsaWI | WCCGGW | 1 cut(s) | 242 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 206, 371 |
| BseBI | CCWGG | 1 cut(s) | 366 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 206, 371 |
| BseMII | CTCAG | 2 cut(s) | 107, 465 |
| BseXI | GCAGC | 3 cut(s) | 136, 139, 182 |
| BshFI | GGCC | 3 cut(s) | 183, 375, 490 |
| BsiHKAI | GWGCWC | 1 cut(s) | 452 |
| BsiSI | CCGG | 1 cut(s) | 243 |
| BslFI | GGGAC | 1 cut(s) | 181 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 206, 371 |
| BsmFI | GGGAC | 1 cut(s) | 181 |
| BsmI | GAATGC | 1 cut(s) | 282 |
| BsnI | GGCC | 3 cut(s) | 183, 375, 490 |
| Bsp1286I | GDGCHC | 1 cut(s) | 452 |
| BspACI | CCGC | 2 cut(s) | 146, 308 |
| BspANI | GGCC | 3 cut(s) | 183, 375, 490 |
| BspCNI | CTCAG | 2 cut(s) | 106, 464 |
| BspLI | GGNNCC | 1 cut(s) | 376 |
| BspMAI | CTGCAG | 2 cut(s) | 136, 157 |
| Bst2UI | CCWGG | 1 cut(s) | 366 |
| Bst4CI | ACNGT | 2 cut(s) | 178, 437 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 117 |
| BstC8I | GCNNGC | 2 cut(s) | 109, 280 |
| BstDEI | CTNAG | 2 cut(s) | 93, 451 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 204 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 117, 152, 161, 170, 423 |
| BstNI | CCWGG | 1 cut(s) | 366 |
| BstSCI | CCNGG | 1 cut(s) | 364 |
| BstSFI | CTRYAG | 3 cut(s) | 132, 153, 396 |
| BstV1I | GCAGC | 3 cut(s) | 136, 139, 182 |
| BstV2I | GAAGAC | 2 cut(s) | 68, 397 |
| BsuRI | GGCC | 3 cut(s) | 183, 375, 490 |
| BtsI | GCAGTG | 1 cut(s) | 162 |
| BtsIMutI | CAGTG | 1 cut(s) | 162 |
| Cac8I | GCNNGC | 2 cut(s) | 109, 280 |
| Cfr13I | GGNCC | 2 cut(s) | 374, 488 |
| CseI | GACGC | 2 cut(s) | 244, 319 |
| CsiI | ACCWGGT | 1 cut(s) | 364 |
| DdeI | CTNAG | 2 cut(s) | 93, 451 |
| DraIII | CACNNNGTG | 1 cut(s) | 368 |
| Eco147I | AGGCCT | 1 cut(s) | 183 |
| Eco57I | CTGAAG | 1 cut(s) | 150 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 204 |
| EcoO109I | RGGNCCY | 1 cut(s) | 374 |
| EcoRII | CCWGG | 1 cut(s) | 364 |
| EcoT22I | ATGCAT | 1 cut(s) | 122 |
| FaiI | YATR | 6 cut(s) | 12, 39, 227, 398, 458, 460 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 401, 433 |
| FaqI | GGGAC | 1 cut(s) | 181 |
| Fnu4HI | GCNGC | 4 cut(s) | 147, 150, 153, 171 |
| Fsp4HI | GCNGC | 4 cut(s) | 147, 150, 153, 171 |
| FspBI | CTAG | 1 cut(s) | 218 |
| GluI | GCNGC | 4 cut(s) | 147, 150, 153, 171 |
| HaeIII | GGCC | 3 cut(s) | 183, 375, 490 |
| HapII | CCGG | 1 cut(s) | 243 |
| HgaI | GACGC | 2 cut(s) | 244, 319 |
| HinfI | GANTC | 3 cut(s) | 194, 311, 469 |
| HpaII | CCGG | 1 cut(s) | 243 |
| HphI | GGTGA | 5 cut(s) | 221, 257, 354, 380, 491 |
| Hpy188I | TCNGA | 5 cut(s) | 83, 389, 422, 454, 468 |
| Hpy188III | TCNNGA | 2 cut(s) | 300, 473 |
| HpyAV | CCTTC | 3 cut(s) | 350, 365, 388 |
| HpyCH4III | ACNGT | 2 cut(s) | 178, 437 |
| HpyCH4V | TGCA | 7 cut(s) | 120, 134, 155, 188, 252, 318, 462 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 117, 152, 161, 170, 423 |
| HpyF3I | CTNAG | 2 cut(s) | 93, 451 |
| LpnPI | CCDG | 6 cut(s) | 120, 213, 256, 331, 351, 378 |
| Lsp1109I | GCAGC | 3 cut(s) | 136, 139, 182 |
| LweI | GCATC | 1 cut(s) | 81 |
| MabI | ACCWGGT | 1 cut(s) | 364 |
| MaeI | CTAG | 1 cut(s) | 218 |
| MaeIII | GTNAC | 2 cut(s) | 331, 479 |
| MboII | GAAGA | 4 cut(s) | 23, 26, 73, 402 |
| MhlI | GDGCHC | 1 cut(s) | 452 |
| MluCI | AATT | 2 cut(s) | 6, 27 |
| MlyI | GAGTC | 2 cut(s) | 203, 320 |
| MnlI | CCTC | 1 cut(s) | 344 |
| Mph1103I | ATGCAT | 1 cut(s) | 122 |
| MroXI | GAANNNNTTC | 1 cut(s) | 88 |
| MspI | CCGG | 1 cut(s) | 243 |
| MspR9I | CCNGG | 1 cut(s) | 366 |
| Mva1269I | GAATGC | 1 cut(s) | 282 |
| MvaI | CCWGG | 1 cut(s) | 366 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 117, 152, 161, 170, 423 |
| NlaIV | GGNNCC | 1 cut(s) | 376 |
| NmuCI | GTSAC | 2 cut(s) | 331, 479 |
| NsiI | ATGCAT | 1 cut(s) | 122 |
| PceI | AGGCCT | 1 cut(s) | 183 |
| PctI | GAATGC | 1 cut(s) | 282 |
| PdmI | GAANNNNTTC | 1 cut(s) | 88 |
| PfeI | GAWTC | 1 cut(s) | 469 |
| PkrI | GCNGC | 4 cut(s) | 148, 151, 154, 172 |
| PleI | GAGTC | 2 cut(s) | 202, 319 |
| PpsI | GAGTC | 2 cut(s) | 202, 319 |
| Psp6I | CCWGG | 1 cut(s) | 364 |
| PspGI | CCWGG | 1 cut(s) | 364 |
| PspN4I | GGNNCC | 1 cut(s) | 376 |
| PspPI | GGNCC | 2 cut(s) | 374, 488 |
| PstI | CTGCAG | 2 cut(s) | 136, 157 |
| SatI | GCNGC | 4 cut(s) | 147, 150, 153, 171 |
| Sau96I | GGNCC | 2 cut(s) | 374, 488 |
| SchI | GAGTC | 2 cut(s) | 203, 320 |
| ScrFI | CCNGG | 1 cut(s) | 366 |
| SduI | GDGCHC | 1 cut(s) | 452 |
| SetI | ASST | 7 cut(s) | 99, 130, 166, 211, 280, 370, 397 |
| SexAI | ACCWGGT | 1 cut(s) | 364 |
| SfaNI | GCATC | 1 cut(s) | 81 |
| SfcI | CTRYAG | 3 cut(s) | 132, 153, 396 |
| Sse9I | AATT | 2 cut(s) | 6, 27 |
| SseBI | AGGCCT | 1 cut(s) | 183 |
| SsiI | CCGC | 2 cut(s) | 146, 308 |
| SspMI | CTAG | 1 cut(s) | 218 |
| StuI | AGGCCT | 1 cut(s) | 183 |
| StyD4I | CCNGG | 1 cut(s) | 364 |
| TaaI | ACNGT | 2 cut(s) | 178, 437 |
| TaqI | TCGA | 2 cut(s) | 192, 472 |
| TasI | AATT | 2 cut(s) | 6, 27 |
| TauI | GCSGC | 1 cut(s) | 149 |
| TfiI | GAWTC | 1 cut(s) | 469 |
| TscAI | CASTG | 1 cut(s) | 162 |
| TseFI | GTSAC | 2 cut(s) | 331, 479 |
| TseI | GCWGC | 3 cut(s) | 149, 152, 170 |
| Tsp45I | GTSAC | 2 cut(s) | 331, 479 |
| TspDTI | ATGAA | 1 cut(s) | 26 |
| TspRI | CASTG | 1 cut(s) | 162 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 204 |
| XmnI | GAANNNNTTC | 1 cut(s) | 88 |
| XspI | CTAG | 1 cut(s) | 218 |
| Zsp2I | ATGCAT | 1 cut(s) | 122 |