FvH4_6g38300

Protein of unknown function (DUF1296)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0008876
Physical Location & Seq
Reverse (-)
30289731 .. 30296751
7021 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g38300.t1

Sequence Viewer

Length: 2412 bp
ATGGGAAGCGAGAGCAAGAACGTAGGAGTAGGAGCGCAGTTCCTGCCGGGGACGAAGAAGATGATACAGAGCCTCAAGGAAGTGGTGAACTGCCCCGAGGCTGAGATCTACGCCGTGCTTAAGGAATGTAACATGGACCCCAACGACGCCGTACAGCGCCTCCTCTCTTTAGATACATTTCACGAAGTGAAGAGCAAACGTGAAAGAAGGAAAGAGATGAAGGACACACAAGAGTCTAGGCCGCGAGTTTACAATGGTGGCTCAAATCGTGGAGTTAGAGTTACTACCGAACACATTGCTGGATCGTGTGGATCAACTCAAACGAGTTTCAATGAGCTTGGTAAAGCTGCATACAAAGGACAAAATGGGTTTGCTGCTCCTTCACCTCATTCTTCAAGTGTAGGAAGAACTACAAACCAGCAACCTTCATCTTACAGTGATTCTTTTAGTACTTCAACAGGGTCGGGTGATGCCATCTCTGCATCCGTGCAACCTTCTCCTGGAAATCAGTCTGCTTGGTCGACCACAAGCTCCGGACATTTTTCAATGGCTGACATCGTCAAAATGGGTAGGAACCCCAGCAAGGGCTCACATATATCATCTGAGATGTCATCTTTGCATCAGGATGCTTTTGAAACAAATTCGTTTAATCACAATGTGGGATCTTCCCAAAATTCTGGCGATGCTGCTGGACAGAATGCTTTCCGTGATGAGTGGCCTGTGATTGAGCAGCCAGTGGCTGCTAGTGGGTCATCAGCTTTAAATGCAAACGTGGAGGCGCATAATAATAGGTCTAACTCGTATTATAATGAATCCAGTATGCTAAGGGATTACCAGCCAGATAAGGTCGAAGTTTCAGAGGTGGGTTTCAGTAGTGAAAACCATAGTTCTGACCATAATGCGTCTGGTAGAGTGAAGATTGTTGATGCTTCTGGTGGGCGATCTCATCGTGTTGACAATTTGTCTTCTAATTCAAGTTCTTATGGCTCTCATAGACGTACAAATGAGAATGAGGAAGGAAAAGCATATTCAAATCAGTCTGTATCTGATGATCTGGCTGTATCATCAGCTACTATAAACATGCAGCAACTGAGTCTAAAAAACGATGAGCCCGAGGATCAGTGTACAGTAGTCCTTCCAAATAATTTGCAAGAATTGGCTGCTGATTGCTCACATTTGAGTTTTGGCACTTACAAATCAGGCAATAATTCTGCTTCAAGGCCGCAATCCTTCCAAAATGACTTGGGAGGAGCCTATGCAGGAATAGATGCTTCATTTTCCGGGCACTTGGATACCAGAAATTCAGGGTACAATCATGATGAGCTTCGTGGATCCTTATACGACAATGGGAGAGCAAACATAGATGCTAAATATTATGATTTTTCTCTAAATTCACAGCCTGAGCTAGCAAAACACGATATCCTTGAAGCTCTAGGGCATAAAGACTTCACAGCTCTACCTGATTTTAGTTCTGACAACATCCTAAGAGCAGGTTCTGGATTGTCTTTTGCAAGGGAAGAACCAAAATTCAGAAATATTCCACCTCTTCAAAGTGATATGGCATATTCAGATTCTCTGCCAAGCGATTTTTTGGAGTCAACAATTCAGTCTTTAAGAGGTTCTGATCTTCCATTCTCACAGTTGTTGGGGACACCATCAATGCCTTCAAGATACAGCAGTGCAGCTTCATCTGTAAACACTCCAACCATTTCCATGTCTGAGGCTCTGAGACCGGGTGCCTTGCCTTTACCTGAGGCATCCTCTGTGCTTCCTCAGCACCTTACCGCTCGGTCATACTCTCAACCTACTTACGAACAAATAGCAAATATTATTGGCTACCCCTCCCCACCTCAGAGCTTCTCACGTACACCGTCAGCATTGCAGCAAGCATATGCAGGTGGTACTGGCCTCCATCAATCTGTGGCAGGCATGGAGTACAGCTTCCCACAGCACAGGAATGGTGCCTCAATAAGCAGAGTGCCGCCATCTGCTGCTGCTGGTGGCCATGGGAGTTTTGGGACCTCTACAAATGTCCATGGCAATTATTTGCATAACTCATCTGTTGCGCCGGTCAGGGACTATGATGATGTGTTTCGTTCTCAATACAAGGATGGAAACCACTTAACCCCTCTTCACCAGAGTCCGAGAACATTATCTTCCGTTCAAGACAGTGCATATAACAACTTGCTTGGGCAGAATCAACAGTATGCAGGATATCGACAAGAACAGGCTGGACAGGTTCCTTCACAATTGCAGCATTATGGATCCATGGGATACCCTGATTACTATAATTCTCAAATGGGCATAACACAAGAACGTCAACGTCAAAGCCTCAATGAATCACCCTTTGCTCCAGGTATTCCAGACTTGTCGCCTCAGCAGTTGCAACAAATTTGGCAGCGGACGTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1296

Protein Analysis

804

Amino Acids

86.96

Weight (kDa)

5.75

Isoelectric Point (pI)

59.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GIP1_N PF06972 18 - 72 5.4e-30 GBF-interacting protein 1 N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 807
AarI CACCTGC 1 cut(s) 1886
Acc36I ACCTGC 2 cut(s) 1481, 1886
AccB1I GGYRCC 2 cut(s) 1736, 1961
AccBSI CCGCTC 1 cut(s) 1787
AccI GTMKAC 1 cut(s) 521
AccII CGCG 1 cut(s) 244
AccIII TCCGGA 1 cut(s) 533
AciI CCGC 5 cut(s) 242, 1223, 1785, 1982, 2401
AclWI GGATC 8 cut(s) 310, 319, 670, 1125, 1326, 1339, 2259, 2272
AcoI YGGCCR 1 cut(s) 2002
AcsI RAATTY 6 cut(s) 640, 673, 1300, 1390, 1526, 2391
AcyI GRCGYC 1 cut(s) 147
AdeI CACNNNGTG 2 cut(s) 187, 658
AfaI GTAC 9 cut(s) 153, 451, 1000, 1126, 1310, 1867, 1903, 1937, 2408
AfiI CCNNNNNNNGG 3 cut(s) 500, 583, 584
AflII CTTAAG 1 cut(s) 119
AhdI GACNNNNNGTC 1 cut(s) 961
AjnI CCWGG 2 cut(s) 499, 2353
Alw26I GTCTC 1 cut(s) 1723
AlwI GGATC 8 cut(s) 310, 319, 670, 1125, 1326, 1339, 2259, 2272
AlwNI CAGNNNCTG 4 cut(s) 43, 740, 1090, 1496
Ama87I CYCGRG 2 cut(s) 95, 1112
Aor13HI TCCGGA 1 cut(s) 533
AoxI GGCC 5 cut(s) 239, 716, 1220, 1906, 2002
ApoI RAATTY 6 cut(s) 640, 673, 1300, 1390, 1526, 2391
Asp700I GAANNNNTTC 1 cut(s) 701
AspLEI GCGC 4 cut(s) 37, 159, 781, 2068
AspS9I GGNCC 2 cut(s) 136, 2019
AsuC2I CCSGG 3 cut(s) 48, 1282, 1734
AsuHPI GGTGA 5 cut(s) 97, 375, 479, 2126, 2334
AsuNHI GCTAGC 1 cut(s) 1405
AvaI CYCGRG 2 cut(s) 95, 1112
AvaII GGWCC 2 cut(s) 136, 2019
AxyI CCTNAGG 1 cut(s) 1752
BaeGI GKGCMC 1 cut(s) 1287
BaeI ACNNNNGTAYC 2 cut(s) 1663, 1696
BalI TGGCCA 1 cut(s) 2004
BamHI GGATCC 2 cut(s) 1331, 2264
BanI GGYRCC 2 cut(s) 1736, 1961
BanII GRGCYC 2 cut(s) 590, 1113
BbsI GAAGAC 1 cut(s) 957
BbvCI CCTCAGC 2 cut(s) 1773, 2376
BccI CCATC 5 cut(s) 482, 1663, 1920, 1993, 2105
BceAI ACGGC 2 cut(s) 98, 134
BcgI CGANNNNNNTGC 2 cut(s) 278, 312
BciT130I CCWGG 2 cut(s) 501, 2355
BciVI GTATCC 2 cut(s) 1285, 2267
BcnI CCSGG 3 cut(s) 48, 1282, 1734
BcoDI GTCTC 1 cut(s) 1723
BfaI CTAG 4 cut(s) 237, 744, 1406, 1433
BfoI RGCGCY 1 cut(s) 160
BfrI CTTAAG 1 cut(s) 119
BfuAI ACCTGC 2 cut(s) 1481, 1886
BfuI GTATCC 2 cut(s) 1285, 2267
BglII AGATCT 1 cut(s) 105
BmcAI AGTACT 1 cut(s) 451
Bme1390I CCNGG 5 cut(s) 48, 501, 1282, 1734, 2355
Bme18I GGWCC 2 cut(s) 136, 2019
BmeRI GACNNNNNGTC 1 cut(s) 961
BmeT110I CYCGRG 2 cut(s) 95, 1112
BmgT120I GGNCC 2 cut(s) 136, 2019
BmiI GGNNCC 9 cut(s) 138, 575, 1252, 1333, 1738, 1963, 2020, 2241, 2266
BmrFI CCNGG 5 cut(s) 48, 501, 1282, 1734, 2355
BmsI GCATC 9 cut(s) 460, 491, 616, 628, 673, 916, 1258, 1354, 1766
BmtI GCTAGC 1 cut(s) 1409
BpiI GAAGAC 1 cut(s) 957
BplI GAGNNNNNCTC 2 cut(s) 1745, 1777
BpmI CTGGAG 1 cut(s) 2337
Bpu10I CCTNAGC 4 cut(s) 824, 1401, 1773, 2376
BpuEI CTTGAG 1 cut(s) 59
BpuMI CCSGG 3 cut(s) 48, 1282, 1734
BsaAI YACGTR 1 cut(s) 1865
BsaHI GRCGYC 1 cut(s) 147
BsaI GGTCTC 1 cut(s) 1723
BsaJI CCNNGG 6 cut(s) 47, 96, 1113, 2005, 2035, 2268
BsaWI WCCGGW 1 cut(s) 533
BsaXI ACNNNNNCTCC 4 cut(s) 144, 174, 264, 294
Bsc4I CCNNNNNNNGG 3 cut(s) 500, 583, 584
Bse118I RCCGGY 1 cut(s) 2068
Bse1I ACTGG 3 cut(s) 734, 816, 1909
Bse21I CCTNAGG 1 cut(s) 1752
Bse3DI GCAATG 2 cut(s) 294, 1877
BseAI TCCGGA 1 cut(s) 533
BseBI CCWGG 2 cut(s) 501, 2355
BseDI CCNNGG 6 cut(s) 47, 96, 1113, 2005, 2035, 2268
BseGI GGATG 5 cut(s) 482, 631, 1479, 1757, 2116
BseLI CCNNNNNNNGG 3 cut(s) 500, 583, 584
BseMI GCAATG 2 cut(s) 294, 1877
BseNI ACTGG 3 cut(s) 734, 816, 1909
BseRI GAGGAG 2 cut(s) 152, 1263
BseSI GKGCMC 1 cut(s) 1287
BseYI CCCAGC 1 cut(s) 578
BsgI GTGCAG 1 cut(s) 1701
Bsh1236I CGCG 1 cut(s) 244
BshFI GGCC 5 cut(s) 241, 718, 1222, 1908, 2004
BshNI GGYRCC 2 cut(s) 1736, 1961
BsiHKCI CYCGRG 2 cut(s) 95, 1112
BsiSI CCGG 5 cut(s) 47, 534, 1281, 1733, 2069
BslFI GGGAC 4 cut(s) 64, 1663, 2032, 2090
BslI CCNNNNNNNGG 3 cut(s) 500, 583, 584
BsmAI GTCTC 1 cut(s) 1723
BsmFI GGGAC 4 cut(s) 64, 1663, 2032, 2090
BsmI GAATGC 1 cut(s) 703
BsnI GGCC 5 cut(s) 241, 718, 1222, 1908, 2004
Bso31I GGTCTC 1 cut(s) 1723
BsoBI CYCGRG 2 cut(s) 95, 1112
Bsp1286I GDGCHC 3 cut(s) 590, 1113, 1287
Bsp13I TCCGGA 1 cut(s) 533
Bsp1407I TGTACA 1 cut(s) 1124
Bsp19I CCATGG 3 cut(s) 2005, 2035, 2268
BspACI CCGC 5 cut(s) 242, 1223, 1785, 1982, 2401
BspANI GGCC 5 cut(s) 241, 718, 1222, 1908, 2004
BspEI TCCGGA 1 cut(s) 533
BspFNI CGCG 1 cut(s) 244
BspHI TCATGA 1 cut(s) 1315
BspLI GGNNCC 9 cut(s) 138, 575, 1252, 1333, 1738, 1963, 2020, 2241, 2266
BspMI ACCTGC 2 cut(s) 1481, 1886
BspOI GCTAGC 1 cut(s) 1409
BspPI GGATC 8 cut(s) 310, 319, 670, 1125, 1326, 1339, 2259, 2272
BspQI GCTCTTC 1 cut(s) 185
BspT107I GGYRCC 2 cut(s) 1736, 1961
BspTI CTTAAG 1 cut(s) 119
BspTNI GGTCTC 1 cut(s) 1723
BsrBI CCGCTC 1 cut(s) 1787
BsrDI GCAATG 2 cut(s) 294, 1877
BsrFI RCCGGY 1 cut(s) 2068
BsrGI TGTACA 1 cut(s) 1124
BsrI ACTGG 3 cut(s) 734, 816, 1909
BssAI RCCGGY 1 cut(s) 2068
BssECI CCNNGG 6 cut(s) 47, 96, 1113, 2005, 2035, 2268
BssNI GRCGYC 1 cut(s) 147
BssT1I CCWWGG 3 cut(s) 2005, 2035, 2268
Bst2UI CCWGG 2 cut(s) 501, 2355
Bst4CI ACNGT 6 cut(s) 437, 1129, 1641, 1872, 2171, 2205
Bst6I CTCTTC 3 cut(s) 185, 1551, 2136
BstACI GRCGYC 1 cut(s) 147
BstAFI CTTAAG 1 cut(s) 119
BstAPI GCANNNNNTGC 1 cut(s) 43
BstAUI TGTACA 1 cut(s) 1124
BstBAI YACGTR 1 cut(s) 1865
BstC8I GCNNGC 3 cut(s) 1407, 1887, 1927
BstDSI CCRYGG 3 cut(s) 2005, 2035, 2268
BstF5I GGATG 5 cut(s) 482, 631, 1479, 1757, 2116
BstFNI CGCG 1 cut(s) 244
BstH2I RGCGCY 1 cut(s) 160
BstHHI GCGC 4 cut(s) 37, 159, 781, 2068
BstMAI GTCTC 1 cut(s) 1723
BstMWI GCNNNNNNNGC 4 cut(s) 43, 479, 764, 1774
BstNI CCWGG 2 cut(s) 501, 2355
BstNSI RCATGY 1 cut(s) 1084
BstSCI CCNGG 5 cut(s) 46, 499, 1280, 1732, 2353
BstSLI GKGCMC 1 cut(s) 1287
BstUI CGCG 1 cut(s) 244
BstV2I GAAGAC 1 cut(s) 957
BstX2I RGATCY 4 cut(s) 105, 662, 1331, 2264
BstXI CCANNNNNNTGG 1 cut(s) 677
BstYI RGATCY 4 cut(s) 105, 662, 1331, 2264
Bsu36I CCTNAGG 1 cut(s) 1752
BsuI GTATCC 2 cut(s) 1285, 2267
BsuRI GGCC 5 cut(s) 241, 718, 1222, 1908, 2004
BtgI CCRYGG 3 cut(s) 2005, 2035, 2268
BtgZI GCGATG 1 cut(s) 696
BtsCI GGATG 5 cut(s) 482, 631, 1479, 1757, 2116
BtsI GCAGTG 1 cut(s) 1684
BtsIMutI CAGTG 5 cut(s) 442, 741, 1127, 1684, 2176
BveI ACCTGC 2 cut(s) 1481, 1886
Cac8I GCNNGC 3 cut(s) 1407, 1887, 1927
CaiI CAGNNNCTG 4 cut(s) 43, 740, 1090, 1496
CciI TCATGA 1 cut(s) 1315
CfoI GCGC 4 cut(s) 37, 159, 781, 2068
Cfr10I RCCGGY 1 cut(s) 2068
Cfr13I GGNCC 2 cut(s) 136, 2019
CseI GACGC 2 cut(s) 155, 891
Csp6I GTAC 9 cut(s) 152, 450, 999, 1125, 1309, 1866, 1902, 1936, 2407
CviAII CATG 8 cut(s) 133, 1081, 1316, 1714, 1930, 2006, 2036, 2269
CviQI GTAC 9 cut(s) 152, 450, 999, 1125, 1309, 1866, 1902, 1936, 2407
DraI TTTAAA 1 cut(s) 762
DraIII CACNNNGTG 2 cut(s) 187, 658
DriI GACNNNNNGTC 1 cut(s) 961
EaeI YGGCCR 1 cut(s) 2002
Eam1104I CTCTTC 3 cut(s) 185, 1551, 2136
Eam1105I GACNNNNNGTC 1 cut(s) 961
EarI CTCTTC 3 cut(s) 185, 1551, 2136
Eco130I CCWWGG 3 cut(s) 2005, 2035, 2268
Eco24I GRGCYC 2 cut(s) 590, 1113
Eco31I GGTCTC 1 cut(s) 1723
Eco32I GATATC 2 cut(s) 1420, 2216
Eco47I GGWCC 2 cut(s) 136, 2019
Eco81I CCTNAGG 1 cut(s) 1752
Eco88I CYCGRG 2 cut(s) 95, 1112
EcoO109I RGGNCCY 1 cut(s) 2019
EcoRII CCWGG 2 cut(s) 499, 2353
EcoRV GATATC 2 cut(s) 1420, 2216
EcoT14I CCWWGG 3 cut(s) 2005, 2035, 2268
EcoT38I GRGCYC 2 cut(s) 590, 1113
ErhI CCWWGG 3 cut(s) 2005, 2035, 2268
FaeI CATG 8 cut(s) 136, 1084, 1319, 1717, 1933, 2009, 2039, 2272
FaqI GGGAC 4 cut(s) 64, 1663, 2032, 2090
FatI CATG 8 cut(s) 132, 1080, 1315, 1713, 1929, 2005, 2035, 2268
FauNDI CATATG 1 cut(s) 1891
FblI GTMKAC 1 cut(s) 521
FokI GGATG 5 cut(s) 469, 638, 1466, 1744, 2123
FriOI GRGCYC 2 cut(s) 590, 1113
FspBI CTAG 4 cut(s) 237, 744, 1406, 1433
GlaI GCGC 4 cut(s) 36, 158, 780, 2067
GsaI CCCAGC 1 cut(s) 582
GsuI CTGGAG 1 cut(s) 2337
HaeII RGCGCY 1 cut(s) 160
HaeIII GGCC 5 cut(s) 241, 718, 1222, 1908, 2004
HapII CCGG 5 cut(s) 47, 534, 1281, 1733, 2069
HgaI GACGC 2 cut(s) 155, 891
HhaI GCGC 4 cut(s) 37, 159, 781, 2068
Hin1I GRCGYC 1 cut(s) 147
Hin1II CATG 8 cut(s) 136, 1084, 1319, 1717, 1933, 2009, 2039, 2272
Hin6I GCGC 4 cut(s) 35, 157, 779, 2066
HinP1I GCGC 4 cut(s) 35, 157, 779, 2066
HincII GTYRAC 4 cut(s) 522, 955, 1599, 2321
HindII GTYRAC 4 cut(s) 522, 955, 1599, 2321
HinfI GANTC 9 cut(s) 233, 440, 812, 1093, 1571, 1595, 2140, 2197, 2339
HpaII CCGG 5 cut(s) 47, 534, 1281, 1733, 2069
HphI GGTGA 5 cut(s) 97, 375, 479, 2126, 2334
Hpy166II GTNNAC 9 cut(s) 88, 250, 522, 955, 1125, 1599, 1696, 1868, 2321
Hpy188III TCNNGA 8 cut(s) 182, 534, 623, 1316, 1497, 1668, 2165, 2363
Hpy8I GTNNAC 9 cut(s) 88, 250, 522, 955, 1125, 1599, 1696, 1868, 2321
Hpy99I CGWCG 1 cut(s) 149
HpyCH4III ACNGT 6 cut(s) 437, 1129, 1641, 1872, 2171, 2205
HpyCH4IV ACGT 8 cut(s) 21, 199, 771, 997, 1864, 2317, 2323, 2405
HpyF10VI GCNNNNNNNGC 4 cut(s) 43, 479, 764, 1774
HpySE526I ACGT 8 cut(s) 21, 199, 771, 997, 1864, 2317, 2323, 2405
Hsp92I GRCGYC 1 cut(s) 147
Hsp92II CATG 8 cut(s) 136, 1084, 1319, 1717, 1933, 2009, 2039, 2272
HspAI GCGC 4 cut(s) 35, 157, 779, 2066
Kpn2I TCCGGA 1 cut(s) 533
LguI GCTCTTC 1 cut(s) 185
LmnI GCTCC 5 cut(s) 32, 382, 536, 1250, 2356
LweI GCATC 9 cut(s) 460, 491, 616, 628, 673, 916, 1258, 1354, 1766
MaeI CTAG 4 cut(s) 237, 744, 1406, 1433
MaeII ACGT 8 cut(s) 21, 199, 771, 997, 1864, 2317, 2323, 2405
MaeIII GTNAC 2 cut(s) 128, 280
MbiI CCGCTC 1 cut(s) 1787
MfeI CAATTG 1 cut(s) 2249
MflI RGATCY 4 cut(s) 105, 662, 1331, 2264
MhlI GDGCHC 3 cut(s) 590, 1113, 1287
MlsI TGGCCA 1 cut(s) 2004
MluNI TGGCCA 1 cut(s) 2004
MlyI GAGTC 4 cut(s) 242, 1102, 1604, 2149
MmeI TCCRAC 1 cut(s) 1727
Mox20I TGGCCA 1 cut(s) 2004
MroI TCCGGA 1 cut(s) 533
MroXI GAANNNNTTC 1 cut(s) 701
MscI TGGCCA 1 cut(s) 2004
MseI TTAA 5 cut(s) 120, 648, 761, 1613, 2123
MslI CAYNNNNRTG 3 cut(s) 624, 1712, 1956
Msp20I TGGCCA 1 cut(s) 2004
MspA1I CMGCKG 1 cut(s) 2401
MspCI CTTAAG 1 cut(s) 119
MspI CCGG 5 cut(s) 47, 534, 1281, 1733, 2069
MspR9I CCNGG 5 cut(s) 48, 501, 1282, 1734, 2355
MunI CAATTG 1 cut(s) 2249
Mva1269I GAATGC 1 cut(s) 703
MvaI CCWGG 2 cut(s) 501, 2355
MvnI CGCG 1 cut(s) 244
MwoI GCNNNNNNNGC 4 cut(s) 43, 479, 764, 1774
NciI CCSGG 3 cut(s) 48, 1282, 1734
NcoI CCATGG 3 cut(s) 2005, 2035, 2268
NdeI CATATG 1 cut(s) 1891
NheI GCTAGC 1 cut(s) 1405
NlaIII CATG 8 cut(s) 136, 1084, 1319, 1717, 1933, 2009, 2039, 2272
NlaIV GGNNCC 9 cut(s) 138, 575, 1252, 1333, 1738, 1963, 2020, 2241, 2266
NspI RCATGY 1 cut(s) 1084
PagI TCATGA 1 cut(s) 1315
PaqCI CACCTGC 1 cut(s) 1886
PciSI GCTCTTC 1 cut(s) 185
PcsI WCGNNNNNNNCGW 1 cut(s) 1110
PctI GAATGC 1 cut(s) 703
PdmI GAANNNNTTC 1 cut(s) 701
PfeI GAWTC 5 cut(s) 440, 812, 1571, 2197, 2339
PflFI GACNNNGTC 1 cut(s) 557
PfoI TCCNGGA 1 cut(s) 499
PleI GAGTC 4 cut(s) 241, 1101, 1603, 2148
PpsI GAGTC 4 cut(s) 241, 1101, 1603, 2148
Ppu21I YACGTR 1 cut(s) 1865
PpuMI RGGWCCY 1 cut(s) 2019
PsiI TTATAA 1 cut(s) 807
Psp5II RGGWCCY 1 cut(s) 2019
Psp6I CCWGG 2 cut(s) 499, 2353
PspFI CCCAGC 1 cut(s) 578
PspGI CCWGG 2 cut(s) 499, 2353
PspN4I GGNNCC 9 cut(s) 138, 575, 1252, 1333, 1738, 1963, 2020, 2241, 2266
PspPI GGNCC 2 cut(s) 136, 2019
PspPPI RGGWCCY 1 cut(s) 2019
PstNI CAGNNNCTG 4 cut(s) 43, 740, 1090, 1496
PsuI RGATCY 4 cut(s) 105, 662, 1331, 2264
PsyI GACNNNGTC 1 cut(s) 557
RsaI GTAC 9 cut(s) 153, 451, 1000, 1126, 1310, 1867, 1903, 1937, 2408
RsaNI GTAC 9 cut(s) 152, 450, 999, 1125, 1309, 1866, 1902, 1936, 2407
RseI CAYNNNNRTG 3 cut(s) 624, 1712, 1956
SalI GTCGAC 1 cut(s) 520
SapI GCTCTTC 1 cut(s) 185
SaqAI TTAA 5 cut(s) 120, 648, 761, 1613, 2123
Sau96I GGNCC 2 cut(s) 136, 2019
ScaI AGTACT 1 cut(s) 451
SchI GAGTC 4 cut(s) 242, 1102, 1604, 2149
ScrFI CCNGG 5 cut(s) 48, 501, 1282, 1734, 2355
SduI GDGCHC 3 cut(s) 590, 1113, 1287
SfaNI GCATC 9 cut(s) 460, 491, 616, 628, 673, 916, 1258, 1354, 1766
SinI GGWCC 2 cut(s) 136, 2019
SmiMI CAYNNNNRTG 3 cut(s) 624, 1712, 1956
SmlI CTYRAG 2 cut(s) 74, 119
SmoI CTYRAG 2 cut(s) 74, 119
SsiI CCGC 5 cut(s) 242, 1223, 1785, 1982, 2401
SspI AATATT 3 cut(s) 1373, 1537, 1828
SspMI CTAG 4 cut(s) 237, 744, 1406, 1433
StyD4I CCNGG 5 cut(s) 46, 499, 1280, 1732, 2353
StyI CCWWGG 3 cut(s) 2005, 2035, 2268
TaaI ACNGT 6 cut(s) 437, 1129, 1641, 1872, 2171, 2205
TaiI ACGT 8 cut(s) 24, 202, 774, 1000, 1867, 2320, 2326, 2408
TaqI TCGA 3 cut(s) 521, 849, 2218
TaqII GACCGA 1 cut(s) 1779
TatI WGTACW 3 cut(s) 449, 1124, 1935
TauI GCSGC 3 cut(s) 244, 1225, 1984
TfiI GAWTC 5 cut(s) 440, 812, 1571, 2197, 2339
Tru1I TTAA 5 cut(s) 120, 648, 761, 1613, 2123
Tru9I TTAA 5 cut(s) 120, 648, 761, 1613, 2123
TscAI CASTG 5 cut(s) 442, 741, 1127, 1684, 2176
TspDTI ATGAA 6 cut(s) 233, 417, 825, 1263, 1677, 2352
TspGWI ACGGA 3 cut(s) 475, 695, 2149
TspRI CASTG 5 cut(s) 442, 741, 1127, 1684, 2176
Tth111I GACNNNGTC 1 cut(s) 557
Vha464I CTTAAG 1 cut(s) 119
VpaK11BI GGWCC 2 cut(s) 136, 2019
XapI RAATTY 6 cut(s) 640, 673, 1300, 1390, 1526, 2391
XceI RCATGY 1 cut(s) 1084
XcmI CCANNNNNNNNNTGG 2 cut(s) 902, 2012
XmiI GTMKAC 1 cut(s) 521
XmnI GAANNNNTTC 1 cut(s) 701
XspI CTAG 4 cut(s) 237, 744, 1406, 1433
ZrmI AGTACT 1 cut(s) 451
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.