Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0008876

Physical Location & Seq

Genomic Coordinates Reverse (-)

19110892 .. 19117627

Gene Structure 6736 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G173800.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2595 bp

ATGGGGAGTGAGACCAAGAATGGTGCGGCGGCCCCGCTTTCGCCGGGGATGAAGAAGATGGTGCAGAGCCTCAAGGAGATTGTAAACTGCCCTGAGCCTGAGATCTACTCGGTGCTTAAAGACTGCAATATGGACCCGAACGAGGCCGTTCAGCGCCTCCTCTCTTTAGAAACATTAGGAGGAGATAGGAAAGTTCAAAGCTTTGAATGTCGTGGGCCTTGTGGCACAGCCGTTATAGATACTTTTCACGAAGTGAAGAGCAAACGTGAAAGAAGGAAAGAGATGAAGGAGACACAAGATTCCAAGTTGCGAGTTCACAGCAGTGGTTCAAATCGTGGAGTTAGAGGTAGTAGTGAGCGTAATGGTGGATGGTGTGGTTCAACTCAAACTAGTTCCAATGAGCTCGGTCAAGCTGCATGCAAGGGACAGAATGGGTTTGTTGCTCCTTCAGCTTCCCATTTTACGGGAGGAACTATGAGCCAGCAACCTTCATCTCACAGTGATTCTCTAAGTACTTCAATAGGGTCAGGCGATGGTGCAACCTCTGCATCCGTGCAACCTTCTCCAGGAAATCAATCTACTTCTTTTGGTACCAGCTCAGGACATCTTTCAATGGCTGAAATTGTTAAGATGGGTAGGCCACCCAGCAAAGGCTCACATATTTCATCTGATACATCTTCCCATCAGGATGCATTTGCAACAAATTTATGTAATTGCCGTGTGGAATCTTCCCAAACTTCTGCATTTATGGAACCAGAGATGCACCGGCACCGATGTATGCACTCTCAGAATCCTTCTCGTGTATCAGAGATGATCCATAAACCTGGTGATACTTCTGGACAGAATGCCTTCCATGATGAATGGCCCGTGATTGAGCAGCCAACAGCTGCAAGTAGGCCATCAGTTTCAAGTGCAAATGTTGAGATACATGCTAATGAATCTAATCTCTATATCAATGACTCCAACATGCCAAGGGACTGCCAGTCTCATAAAGTCCAAGTATCAGAGGGGAATTATAGTAGTCAAAATCTTAGTTCAGACCACAATGCTTATGCTTTTGCTTCCAGCAGACAGAAGATGGTGGATGCTTCTGGTGGAAGATCTTATTGTGTTGATGATTTGTCTTCTAATTCTAGTTCCTATGATTCTCATAGGTCTGCATATGAGAATGGGGAAGGAACTGGCTTTGGTTCAAATGTGTCATATCCAAATCATTCTGTCTCCAATGATGTTGCTGTGGCTGCATCATCAGCTACTATGAACATGCAACAACTAAATTTAGGAAAGGAGGAGCCTACAGAAAATTGTGCAGTAGTCCTTCCAAATAATTTGCAAGAGTTGGCAGCTGATTGCTCACATTTGAGTTTTGGCACCTTCAGATCGGGCCCTAGTTCTGCATTTTCCAGGTCGCCATCTAATTCCTTGAAAAATGACTTGGGAGGATTCTCAGCAGGAATAAATGTTTCATCAGGCGGGCACTTGGATACAAGGCATGAGTCTTTCAATTCAGGGTACAATCATGACGAACTTCTTGGATCCTTATATGATACAGGAAGGGCAACCAGAGATGCTAAACATTCTGACTTGCCTCAGCCAGAGCTGATAAAACATGATATCCTTGAACCTACCCCTGGACATAAAGACATCTCCGCCTCATCTCTACGTGATTTTGATTCTGAGAACATCCAAAGAGCAAGTTCTGGATCGTCTTTTGCTAGAGCAGATCCCAAATTCAGAAATATTCCTCCTCATCAAAACGATATGGCATATTCGGATTCTATGCGAAGTGATCTTTTGGAGTCATACTCGCAGTTGTTGGTGACACCATCAGTGCCTTCAAGACACAGCAGTGCAATTTCATCCGTAAACAATCCAACCATTTCCGTGTCAGAGGCTCTGAGACCAGGCTCCATACCTTTGTCTGAGGCATCTTCTGTACTTCCTCAGCACCTAACATCCCGTTCATACTCGCAACCTGCCCTTTCTTATGAACAGTTAGCGAACATAATGGGCTACCCTTCCATGACTCAGAGCTACTCCCCTGCACCATCAACTTTGCAGCAAGCATATCTAGGTGGTAGTGCATTCCAGCAGTCCGTGGCTGGCATGGATTACAACTTTCCGCAGTACAGAAGTGGAGCCTCAGTAAGCAGATTGCCACCATCTGCTGCTGCTGTTGGTGGTCATGGAAATTTTGGGGCCTCTAATAACGTTCATGGGAGTTTCTTGCAAAATGCATCTGCTGCTCCCATCAGCATGAGTGACTATGATGATGCTTTGCGCGCTCGGTACAAGGATGGAAGCCATTTAACCCCTCTTCATCAGAGTTCAAGAACATTGTCTTCCATTCCAGACAGTGTATATAACACCTTACTTCGTCAGAATCAACAGAATGCAGGATATCAACAAGGGCAGGCTGGACAGATGCCCTCACAGTTGCAGCATTATGGATCCCCGGGATACCCCGATTTCTATCCGTCCCAAATGGGCATAACACAAGAACATCACCGGCAAAGTGTCAATGATTTAAGCTTAGCCGGGATTCAAGACCTTTCACCTCAGCAGTTGCACCAGATTTGGCAGCGGACCTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1296

Protein Analysis

865

Amino Acids

92.9

Weight (kDa)

6.07

Isoelectric Point (pI)

60.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008876)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g38300 FvH4_6g38300 FvH4_6g38300 FvH4_6g38300 FvH4_6g38300
malus_domestica	MD09G1151000.v1.1 MD17G1138600.v1.1
prunus_persica	Prupe.3G173800_v2.0.a1 Prupe.3G173800_v2.0.a1 Prupe.3G173800_v2.0.a1 Prupe.3G173800_v2.0.a1
pyrus_communis	pycom09g07080 pycom17g13170
rosa_chinensis	RchiOBHm_Chr2g0151631
rosa_laevigata	RLG00000020565
rosa_multiflora	Rmu_sc0005287.1_g000004
rosa_roxburghii	Rroxscaffold_2G00096300
rosa_rugosa	Rorug02G0427400
rosa_samantha	Rh2AG488300 Rh2BG500900 Rh2CG474800 Rh2DG512000
rosa_wichuraiana	Rw2G040030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1984
Acc65I	GGTACC	1 cut(s)	590
AccB1I	GGYRCC	3 cut(s)	590, 768, 1370
AccII	CGCG	1 cut(s)	2283
AciI	CCGC	7 cut(s)	26, 29, 35, 1473, 1650, 2123, 2584
AclI	AACGTT	1 cut(s)	2211
AclWI	GGATC	7 cut(s)	808, 1530, 1543, 1711, 1718, 2445, 2458
AcsI	RAATTY	4 cut(s)	703, 1276, 1730, 2191
AcuI	CTGAAG	2 cut(s)	432, 1360
AdeI	CACNNNGTG	1 cut(s)	253
AfaI	GTAC	6 cut(s)	514, 592, 1514, 1938, 2129, 2291
AfiI	CCNNNNNNNGG	5 cut(s)	142, 463, 566, 650, 1631
AhdI	GACNNNNNGTC	1 cut(s)	982
AhlI	ACTAGT	1 cut(s)	389
AjnI	CCWGG	5 cut(s)	565, 823, 1403, 1630, 1903
AjuI	GAANNNNNNNTTGG	2 cut(s)	1418, 1450
AleI	CACNNNNGTG	2 cut(s)	321, 1848
Alw21I	GWGCWC	1 cut(s)	405
Alw26I	GTCTC	5 cut(s)	5, 284, 990, 1225, 1894
AlwI	GGATC	7 cut(s)	808, 1530, 1543, 1711, 1718, 2445, 2458
Ama87I	CYCGRG	1 cut(s)	2455
AoxI	GGCC	8 cut(s)	30, 144, 215, 638, 863, 896, 1384, 2199
ApaI	GGGCCC	1 cut(s)	1388
ApoI	RAATTY	4 cut(s)	703, 1276, 1730, 2191
Asp700I	GAANNNNTTC	1 cut(s)	848
Asp718I	GGTACC	1 cut(s)	590
AspLEI	GCGC	3 cut(s)	156, 2283, 2285
AspS9I	GGNCC	8 cut(s)	31, 133, 215, 864, 1384, 1385, 2199, 2586
AsuC2I	CCSGG	4 cut(s)	45, 2456, 2457, 2539
AsuHPI	GGTGA	4 cut(s)	839, 1831, 2498, 2547
AvaI	CYCGRG	1 cut(s)	2455
AvaII	GGWCC	2 cut(s)	133, 2586
BaeGI	GKGCMC	2 cut(s)	1388, 1479
BamHI	GGATCC	2 cut(s)	1535, 2450
BanI	GGYRCC	3 cut(s)	590, 768, 1370
BanII	GRGCYC	2 cut(s)	405, 1388
BauI	CACGAG	1 cut(s)	798
BbsI	GAAGAC	2 cut(s)	1116, 2334
Bbv12I	GWGCWC	1 cut(s)	405
BbvCI	CCTCAGC	3 cut(s)	1590, 1944, 2559
BceAI	ACGGC	3 cut(s)	131, 215, 702
BciT130I	CCWGG	5 cut(s)	567, 825, 1405, 1632, 1905
BciVI	GTATCC	2 cut(s)	1477, 2453
BcnI	CCSGG	4 cut(s)	45, 2456, 2457, 2539
BcoDI	GTCTC	5 cut(s)	5, 284, 990, 1225, 1894
BcuI	ACTAGT	1 cut(s)	389
BfaI	CTAG	5 cut(s)	390, 1134, 1389, 1716, 2072
BfmI	CTRYAG	1 cut(s)	1296
BfoI	RGCGCY	1 cut(s)	157
BfuAI	ACCTGC	1 cut(s)	1984
BfuI	GTATCC	2 cut(s)	1477, 2453
BglII	AGATCT	2 cut(s)	102, 1100
BlpI	GCTNAGC	1 cut(s)	2533
BmcAI	AGTACT	1 cut(s)	514
Bme1390I	CCNGG	9 cut(s)	45, 567, 825, 1405, 1632, 1905, 2456, 2457, 2539
Bme18I	GGWCC	2 cut(s)	133, 2586
BmeRI	GACNNNNNGTC	1 cut(s)	982
BmeT110I	CYCGRG	1 cut(s)	2455
BmgT120I	GGNCC	8 cut(s)	31, 133, 215, 864, 1384, 1385, 2199, 2586
BmrFI	CCNGG	9 cut(s)	45, 567, 825, 1405, 1632, 1905, 2456, 2457, 2539
BpiI	GAAGAC	2 cut(s)	1116, 2334
BplI	GAGNNNNNCTC	4 cut(s)	92, 124, 1790, 1822
BpmI	CTGGAG	1 cut(s)	549
Bpu10I	CCTNAGC	5 cut(s)	93, 598, 1590, 1944, 2559
Bpu1102I	GCTNAGC	1 cut(s)	2533
BpuEI	CTTGAG	1 cut(s)	56
BpuMI	CCSGG	4 cut(s)	45, 2456, 2457, 2539
BsaAI	YACGTR	1 cut(s)	1664
BsaBI	GATNNNNATC	1 cut(s)	2472
BsaI	GGTCTC	2 cut(s)	5, 1894
BsaJI	CCNNGG	6 cut(s)	44, 971, 1630, 2097, 2454, 2455
BsaXI	ACNNNNNCTCC	2 cut(s)	2130, 2160
Bsc4I	CCNNNNNNNGG	5 cut(s)	142, 463, 566, 650, 1631
Bse118I	RCCGGY	2 cut(s)	765, 2508
Bse1I	ACTGG	2 cut(s)	982, 1186
Bse8I	GATNNNNATC	1 cut(s)	2472
BseBI	CCWGG	5 cut(s)	567, 825, 1405, 1632, 1905
BseDI	CCNNGG	6 cut(s)	44, 971, 1630, 2097, 2454, 2455
BseGI	GGATG	9 cut(s)	54, 374, 548, 694, 1090, 1683, 1859, 1955, 2302
BseJI	GATNNNNATC	1 cut(s)	2472
BseLI	CCNNNNNNNGG	5 cut(s)	142, 463, 566, 650, 1631
BseNI	ACTGG	2 cut(s)	982, 1186
BsePI	GCGCGC	1 cut(s)	2281
BseRI	GAGGAG	4 cut(s)	149, 195, 1304, 1737
BseSI	GKGCMC	2 cut(s)	1388, 1479
BseYI	CCCAGC	1 cut(s)	644
BsgI	GTGCAG	3 cut(s)	83, 1329, 2028
Bsh1236I	CGCG	1 cut(s)	2283
BshFI	GGCC	8 cut(s)	32, 146, 217, 640, 865, 898, 1386, 2201
BshNI	GGYRCC	3 cut(s)	590, 768, 1370
BsiHKAI	GWGCWC	1 cut(s)	405
BsiHKCI	CYCGRG	1 cut(s)	2455
BsiSI	CCGG	5 cut(s)	44, 766, 2456, 2509, 2538
BslFI	GGGAC	3 cut(s)	438, 989, 2464
BslI	CCNNNNNNNGG	5 cut(s)	142, 463, 566, 650, 1631
BsmAI	GTCTC	5 cut(s)	5, 284, 990, 1225, 1894
BsmFI	GGGAC	3 cut(s)	438, 989, 2464
BsmI	GAATGC	3 cut(s)	850, 2084, 2398
BsnI	GGCC	8 cut(s)	32, 146, 217, 640, 865, 898, 1386, 2201
Bso31I	GGTCTC	2 cut(s)	5, 1894
BsoBI	CYCGRG	1 cut(s)	2455
Bsp120I	GGGCCC	1 cut(s)	1384
Bsp1286I	GDGCHC	3 cut(s)	405, 1388, 1479
Bsp143I	GATC	9 cut(s)	102, 813, 1100, 1379, 1535, 1703, 1723, 1789, 2450
Bsp1720I	GCTNAGC	1 cut(s)	2533
BspACI	CCGC	7 cut(s)	26, 29, 35, 1473, 1650, 2123, 2584
BspANI	GGCC	8 cut(s)	32, 146, 217, 640, 865, 898, 1386, 2201
BspFNI	CGCG	1 cut(s)	2283
BspHI	TCATGA	1 cut(s)	1519
BspMI	ACCTGC	1 cut(s)	1984
BspPI	GGATC	7 cut(s)	808, 1530, 1543, 1711, 1718, 2445, 2458
BspQI	GCTCTTC	1 cut(s)	251
BspT107I	GGYRCC	3 cut(s)	590, 768, 1370
BspTNI	GGTCTC	2 cut(s)	5, 1894
BsrFI	RCCGGY	2 cut(s)	765, 2508
BsrI	ACTGG	2 cut(s)	982, 1186
BssAI	RCCGGY	2 cut(s)	765, 2508
BssECI	CCNNGG	6 cut(s)	44, 971, 1630, 2097, 2454, 2455
BssHII	GCGCGC	1 cut(s)	2281
BssMI	GATC	9 cut(s)	102, 813, 1100, 1379, 1535, 1703, 1723, 1789, 2450
BssSI	CACGAG	1 cut(s)	798
BssT1I	CCWWGG	1 cut(s)	971
Bst2BI	CACGAG	1 cut(s)	798
Bst2UI	CCWGG	5 cut(s)	567, 825, 1405, 1632, 1905
Bst4CI	ACNGT	4 cut(s)	500, 1995, 2357, 2436
Bst6I	CTCTTC	2 cut(s)	251, 2322
BstAPI	GCANNNNNTGC	2 cut(s)	545, 2243
BstBAI	YACGTR	1 cut(s)	1664
BstC8I	GCNNGC	7 cut(s)	418, 482, 1475, 2064, 2104, 2283, 2415
BstDSI	CCRYGG	1 cut(s)	2097
BstENI	CCTNNNNNAGG	1 cut(s)	564
BstF5I	GGATG	9 cut(s)	54, 374, 548, 694, 1090, 1683, 1859, 1955, 2302
BstFNI	CGCG	1 cut(s)	2283
BstH2I	RGCGCY	1 cut(s)	157
BstHHI	GCGC	3 cut(s)	156, 2283, 2285
BstKTI	GATC	9 cut(s)	105, 816, 1103, 1382, 1538, 1706, 1726, 1792, 2453
BstMAI	GTCTC	5 cut(s)	5, 284, 990, 1225, 1894
BstMBI	GATC	9 cut(s)	102, 813, 1100, 1379, 1535, 1703, 1723, 1789, 2450
BstMWI	GCNNNNNNNGC	6 cut(s)	449, 545, 1241, 1250, 2243, 2282
BstNI	CCWGG	5 cut(s)	567, 825, 1405, 1632, 1905
BstNSI	RCATGY	4 cut(s)	420, 932, 970, 1267
BstSCI	CCNGG	9 cut(s)	43, 565, 823, 1403, 1630, 1903, 2454, 2455, 2537
BstSFI	CTRYAG	1 cut(s)	1296
BstSLI	GKGCMC	2 cut(s)	1388, 1479
BstUI	CGCG	1 cut(s)	2283
BstV2I	GAAGAC	2 cut(s)	1116, 2334
BstX2I	RGATCY	5 cut(s)	102, 1100, 1535, 1723, 2450
BstXI	CCANNNNNNTGG	1 cut(s)	824
BstYI	RGATCY	5 cut(s)	102, 1100, 1535, 1723, 2450
BsuI	GTATCC	2 cut(s)	1477, 2453
BsuRI	GGCC	8 cut(s)	32, 146, 217, 640, 865, 898, 1386, 2201
BtgI	CCRYGG	1 cut(s)	2097
BtgZI	GCGATG	1 cut(s)	546
BtsCI	GGATG	9 cut(s)	54, 374, 548, 694, 1090, 1683, 1859, 1955, 2302
BtsI	GCAGTG	2 cut(s)	328, 1855
BtsIMutI	CAGTG	5 cut(s)	328, 505, 1836, 1855, 2362
BveI	ACCTGC	1 cut(s)	1984
Cac8I	GCNNGC	7 cut(s)	418, 482, 1475, 2064, 2104, 2283, 2415
CciI	TCATGA	1 cut(s)	1519
CfoI	GCGC	3 cut(s)	156, 2283, 2285
Cfr10I	RCCGGY	2 cut(s)	765, 2508
Cfr13I	GGNCC	8 cut(s)	31, 133, 215, 864, 1384, 1385, 2199, 2586
Cfr9I	CCCGGG	1 cut(s)	2455
CsiI	ACCWGGT	1 cut(s)	823
Csp6I	GTAC	6 cut(s)	513, 591, 1513, 1937, 2128, 2290
CviQI	GTAC	6 cut(s)	513, 591, 1513, 1937, 2128, 2290
DpnI	GATC	9 cut(s)	104, 815, 1102, 1381, 1537, 1705, 1725, 1791, 2452
DpnII	GATC	9 cut(s)	102, 813, 1100, 1379, 1535, 1703, 1723, 1789, 2450
DraIII	CACNNNGTG	1 cut(s)	253
DriI	GACNNNNNGTC	1 cut(s)	982
Eam1104I	CTCTTC	2 cut(s)	251, 2322
Eam1105I	GACNNNNNGTC	1 cut(s)	982
EarI	CTCTTC	2 cut(s)	251, 2322
EciI	GGCGGA	1 cut(s)	1639
Ecl136II	GAGCTC	1 cut(s)	403
Eco130I	CCWWGG	1 cut(s)	971
Eco24I	GRGCYC	2 cut(s)	405, 1388
Eco31I	GGTCTC	2 cut(s)	5, 1894
Eco32I	GATATC	2 cut(s)	1615, 2402
Eco47I	GGWCC	2 cut(s)	133, 2586
Eco53kI	GAGCTC	1 cut(s)	403
Eco57I	CTGAAG	2 cut(s)	432, 1360
Eco88I	CYCGRG	1 cut(s)	2455
EcoICRI	GAGCTC	1 cut(s)	403
EcoNI	CCTNNNNNAGG	1 cut(s)	564
EcoO109I	RGGNCCY	2 cut(s)	1385, 2199
EcoRII	CCWGG	5 cut(s)	565, 823, 1403, 1630, 1903
EcoRV	GATATC	2 cut(s)	1615, 2402
EcoT14I	CCWWGG	1 cut(s)	971
EcoT22I	ATGCAT	2 cut(s)	694, 2239
EcoT38I	GRGCYC	2 cut(s)	405, 1388
ErhI	CCWWGG	1 cut(s)	971
FaqI	GGGAC	3 cut(s)	438, 989, 2464
FauI	CCCGC	2 cut(s)	42, 1466
FauNDI	CATATG	1 cut(s)	1162
FokI	GGATG	9 cut(s)	61, 381, 535, 701, 1097, 1670, 1846, 1942, 2309
FriOI	GRGCYC	2 cut(s)	405, 1388
FspBI	CTAG	5 cut(s)	390, 1134, 1389, 1716, 2072
GlaI	GCGC	3 cut(s)	155, 2282, 2284
GsaI	CCCAGC	1 cut(s)	648
GsuI	CTGGAG	1 cut(s)	549
HaeII	RGCGCY	1 cut(s)	157
HaeIII	GGCC	8 cut(s)	32, 146, 217, 640, 865, 898, 1386, 2201
HapII	CCGG	5 cut(s)	44, 766, 2456, 2509, 2538
HhaI	GCGC	3 cut(s)	156, 2283, 2285
Hin6I	GCGC	3 cut(s)	154, 2281, 2283
HinP1I	GCGC	3 cut(s)	154, 2281, 2283
HindIII	AAGCTT	2 cut(s)	199, 2530
HpaII	CCGG	5 cut(s)	44, 766, 2456, 2509, 2538
HphI	GGTGA	4 cut(s)	839, 1831, 2498, 2547
Hpy166II	GTNNAC	3 cut(s)	85, 316, 1867
Hpy8I	GTNNAC	3 cut(s)	85, 316, 1867
HpyCH4III	ACNGT	4 cut(s)	500, 1995, 2357, 2436
HpyCH4IV	ACGT	3 cut(s)	265, 1663, 2211
HpyF10VI	GCNNNNNNNGC	6 cut(s)	449, 545, 1241, 1250, 2243, 2282
HpySE526I	ACGT	3 cut(s)	265, 1663, 2211
HspAI	GCGC	3 cut(s)	154, 2281, 2283
KpnI	GGTACC	1 cut(s)	594
Kzo9I	GATC	9 cut(s)	102, 813, 1100, 1379, 1535, 1703, 1723, 1789, 2450
LguI	GCTCTTC	1 cut(s)	251
LmnI	GCTCC	5 cut(s)	448, 1291, 1913, 2138, 2251
MabI	ACCWGGT	1 cut(s)	823
MaeI	CTAG	5 cut(s)	390, 1134, 1389, 1716, 2072
MaeII	ACGT	3 cut(s)	265, 1663, 2211
MaeIII	GTNAC	2 cut(s)	1819, 2261
MalI	GATC	9 cut(s)	104, 815, 1102, 1381, 1537, 1705, 1725, 1791, 2452
MboI	GATC	9 cut(s)	102, 813, 1100, 1379, 1535, 1703, 1723, 1789, 2450
MflI	RGATCY	5 cut(s)	102, 1100, 1535, 1723, 2450
MhlI	GDGCHC	3 cut(s)	405, 1388, 1479
MlyI	GAGTC	4 cut(s)	953, 1505, 1808, 2020
MmeI	TCCRAC	2 cut(s)	987, 1898
Mph1103I	ATGCAT	2 cut(s)	694, 2239
MroXI	GAANNNNTTC	1 cut(s)	848
MseI	TTAA	4 cut(s)	117, 627, 2309, 2528
MslI	CAYNNNNRTG	6 cut(s)	321, 687, 933, 1848, 1883, 2255
MspA1I	CMGCKG	3 cut(s)	887, 1346, 2584
MspI	CCGG	5 cut(s)	44, 766, 2456, 2509, 2538
MspR9I	CCNGG	9 cut(s)	45, 567, 825, 1405, 1632, 1905, 2456, 2457, 2539
Mva1269I	GAATGC	3 cut(s)	850, 2084, 2398
MvaI	CCWGG	5 cut(s)	567, 825, 1405, 1632, 1905
MvnI	CGCG	1 cut(s)	2283
MwoI	GCNNNNNNNGC	6 cut(s)	449, 545, 1241, 1250, 2243, 2282
NciI	CCSGG	4 cut(s)	45, 2456, 2457, 2539
NdeI	CATATG	1 cut(s)	1162
NdeII	GATC	9 cut(s)	102, 813, 1100, 1379, 1535, 1703, 1723, 1789, 2450
NmuCI	GTSAC	2 cut(s)	1819, 2261
NsiI	ATGCAT	2 cut(s)	694, 2239
NspI	RCATGY	4 cut(s)	420, 932, 970, 1267
OliI	CACNNNNGTG	2 cut(s)	321, 1848
PaeI	GCATGC	1 cut(s)	420
PagI	TCATGA	1 cut(s)	1519
PauI	GCGCGC	1 cut(s)	2281
PciSI	GCTCTTC	1 cut(s)	251
PctI	GAATGC	3 cut(s)	850, 2084, 2398
PdmI	GAANNNNTTC	1 cut(s)	848
PfoI	TCCNGGA	1 cut(s)	565
PleI	GAGTC	4 cut(s)	953, 1504, 1807, 2020
PpsI	GAGTC	4 cut(s)	953, 1504, 1807, 2020
Ppu21I	YACGTR	1 cut(s)	1664
Psp124BI	GAGCTC	1 cut(s)	405
Psp1406I	AACGTT	1 cut(s)	2211
Psp6I	CCWGG	5 cut(s)	565, 823, 1403, 1630, 1903
PspFI	CCCAGC	1 cut(s)	644
PspGI	CCWGG	5 cut(s)	565, 823, 1403, 1630, 1903
PspOMI	GGGCCC	1 cut(s)	1384
PspPI	GGNCC	8 cut(s)	31, 133, 215, 864, 1384, 1385, 2199, 2586
PsuI	RGATCY	5 cut(s)	102, 1100, 1535, 1723, 2450
PteI	GCGCGC	1 cut(s)	2281
PvuII	CAGCTG	2 cut(s)	887, 1346
RsaI	GTAC	6 cut(s)	514, 592, 1514, 1938, 2129, 2291
RsaNI	GTAC	6 cut(s)	513, 591, 1513, 1937, 2128, 2290
RseI	CAYNNNNRTG	6 cut(s)	321, 687, 933, 1848, 1883, 2255
SacI	GAGCTC	1 cut(s)	405
SapI	GCTCTTC	1 cut(s)	251
SaqAI	TTAA	4 cut(s)	117, 627, 2309, 2528
Sau3AI	GATC	9 cut(s)	102, 813, 1100, 1379, 1535, 1703, 1723, 1789, 2450
Sau96I	GGNCC	8 cut(s)	31, 133, 215, 864, 1384, 1385, 2199, 2586
ScaI	AGTACT	1 cut(s)	514
SchI	GAGTC	4 cut(s)	953, 1505, 1808, 2020
ScrFI	CCNGG	9 cut(s)	45, 567, 825, 1405, 1632, 1905, 2456, 2457, 2539
SduI	GDGCHC	3 cut(s)	405, 1388, 1479
SexAI	ACCWGGT	1 cut(s)	823
SfcI	CTRYAG	1 cut(s)	1296
SinI	GGWCC	2 cut(s)	133, 2586
SmaI	CCCGGG	1 cut(s)	2457
SmiMI	CAYNNNNRTG	6 cut(s)	321, 687, 933, 1848, 1883, 2255
SmlI	CTYRAG	1 cut(s)	71
SmoI	CTYRAG	1 cut(s)	71
SpeI	ACTAGT	1 cut(s)	389
SphI	GCATGC	1 cut(s)	420
SsiI	CCGC	7 cut(s)	26, 29, 35, 1473, 1650, 2123, 2584
SspI	AATATT	1 cut(s)	1741
SspMI	CTAG	5 cut(s)	390, 1134, 1389, 1716, 2072
SstI	GAGCTC	1 cut(s)	405
StyD4I	CCNGG	9 cut(s)	43, 565, 823, 1403, 1630, 1903, 2454, 2455, 2537
StyI	CCWWGG	1 cut(s)	971
TaaI	ACNGT	4 cut(s)	500, 1995, 2357, 2436
TaiI	ACGT	3 cut(s)	268, 1666, 2214
TaqII	GACCGA	1 cut(s)	395
TatI	WGTACW	3 cut(s)	512, 1936, 2127
TauI	GCSGC	2 cut(s)	29, 32
Tru1I	TTAA	4 cut(s)	117, 627, 2309, 2528
Tru9I	TTAA	4 cut(s)	117, 627, 2309, 2528
TscAI	CASTG	5 cut(s)	328, 505, 1836, 1855, 2362
TseFI	GTSAC	2 cut(s)	1819, 2261
Tsp45I	GTSAC	2 cut(s)	1819, 2261
TspGWI	ACGGA	5 cut(s)	541, 1852, 1873, 2086, 2466
TspMI	CCCGGG	1 cut(s)	2455
TspRI	CASTG	5 cut(s)	328, 505, 1836, 1855, 2362
VpaK11BI	GGWCC	2 cut(s)	133, 2586
XagI	CCTNNNNNAGG	1 cut(s)	564
XapI	RAATTY	4 cut(s)	703, 1276, 1730, 2191
XceI	RCATGY	4 cut(s)	420, 932, 970, 1267
XmaI	CCCGGG	1 cut(s)	2455
XmnI	GAANNNNTTC	1 cut(s)	848
XspI	CTAG	5 cut(s)	390, 1134, 1389, 1716, 2072
ZrmI	AGTACT	1 cut(s)	514
Zsp2I	ATGCAT	2 cut(s)	694, 2239

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.