RLG00000020565

Protein of unknown function (DUF1296)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0008876
Physical Location & Seq
Reverse (-)
66310086 .. 66316661
6576 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020565

Sequence Viewer

Length: 2445 bp
ATGGGCAGCGAGAGCAAGAATGGAGTAGGGACGCAGGTCTTGCCGGGGACGAAGAAGATGGTGCAGAGTCTCAAGGAGGTCGTCAACTGCCCGGAGGCTGAGATCTACGCCGTGCTTAAAGAATGTAACATGGACCCCAACGAAGCCGTACAGCGACTCCTCTCTTTAGTTTTGCATTTCCCAAAAGAAAAAAAAATAAAAAATAAAAACTATTCTCTGCCTTGCAGCTTGTTTTCTTGCATAAAGGAGACACAAGAGTCCAGGCCGCGAGTTCACAATGGTGGTTCAAATCGTGGAGTTAGAGTTACTAGTGAACATATTGCTGGATCAACTCAAACGAGTTACAATGAGCTTGGTAAAGCTGCATACAAGGGACAAAATGGGTTTGCTGCTCCTTCACCTCATTCTTCCATTATAGGAAGAACTACAAACCAGCAACCTTCATCTCACAGTGATTCTTTTAGTACTTCAATAGGGTCAGGTGATGCCATCTCTGCATCTGTGCAACCTTCTCCTGGAAATCAATCTGCTTGGTCAACCACGAGCTCAGGACATTTTTCAATGGCTGACATTGTTAAAATGGGTAGGAACCCCAGCAAGGGCTCACATATATCATCTGAGACATCATCTTTGCATCAGGATGCATTTGAAACAAATTCGTTTAATTACAACGTGGGATCTTCTGGCGATACTGCTGGACAGAATGCTTTCCGTGATGAATGGCCCGTGATTGAGCAGCCAATGGCTGCTAGTGTTTCATCAGCTTTGAATGCAAATGTGGAAGCGCATACTAACAGGTCTAACTCATATAATAATGAATCCAACATGCCAAGAGATTACCAGTCAGATAAGGTTCAAGTTTCAGAGGTGGATTTTAGTAGTGAAAATCATAGTTCTGACCACAATGCGTCCAGTAGACCGAAAATTGTTGATGCTTCTGGTGGACGATCTTATCGTGCTGACAATTTGTCTTCTAATTCAAGTTCTTACGGCTCTCATATGCGCACCAATGAGAATGAGGAAGGAAAAGCATATCCAAATCATTTTATGTCTGATGATGTTGTGGCTGTATCATCAGCTACTATGAACATGCAGCAACTGAGTTTAGGAAAGAAGGAGCCTGAGGATCAGTGTACAGTAGTCCTTCCAAATAATTTGCAAGAATTGGCTGCTGATTGTTCACATTTGAGTTTTGGCACCTACAAATCAGGCCATAATTCTGCTTCAAGGTCTCATTCTGCTTCAAAGTCTCAATCCTTCCAAAATGACTTGGGAGGAGCCTATGCAGGAATGGATGCTTCATTTTCTGGGCACTTGGATACCAGAAATTCAGGGTACAATCATGACAAGCTTCTTGGACCCTTATACGACAATGGGAAAGCAACCATAGATGCTAAATATTATGATTTTCCCGTACATTCACAGCCGGAGCTAGTAAAACACGATATCCTTGAAGCTCTAGGGCATAAAGACATCACATCTCTCCCTGATTTTAGTTCTGACAACATTCTAAGAGCAAGTTCTGGATTGTCTTTTGCAAGGGAGGAACCAAAATTCAGAAATATTCCACCTCTTCAAAGTGATATGGCATATCCAGATTCTATGCAAAGTGATCTTTTGGAGTCAACTTTTCAGTCTTTAAGAGGTTCTGATCTTCCATTCTCACAGTTGTTGGGGACACCATCAATGTCTTCAAGATACAGCAGTGCAGTTTCATCTGGAAACAGTCCAAACATTTCCATGGCTGAGGCTCTGAGACCTGGTGCCTTGCCTTTACCTGAGGCATCCTCTGTGCTTCCTCAGCACCTTACAGCTCGGTCATACTCCCAACCTACTTACGAACAAATAGCAAATATTATTGGCTACCCCTCTCCACCCCAGAGCTTCTCGCGTACACCATCAGCATTGCAGCAAGCATATGCAGGTGGTACTGGGCTCCATCAATCTGTGGCAGGCATGGAGTACAGCTTCTCTCAGCACAGAAATGGTGCCTCAATAAGCAGAGTGCCACCATCTGCTGTTGCTGCTGGTGGCCATGGGAGTTTTGGGACCTCTACCAATGTTCATGGTAATTTTTTGCATAACTCATCTGTCGCACCCATCAGCACTAGGGACTATGATGATGTTTTTCGTTCTCAGTACAAGGATGGAAACCATTTATCCCCTCTTCACCAGAGTTCGAGAACATTGTCTTCTGTTCAAGACAGTGCATATAACAACTTACTTGGGCAGAATCAACAGTATGCAGGATATCAACAAGAACAGGCTGGACAGGTTCCTTCACAGTTGCAGCATTATGGATCCATGGGATACCCTGATTTCTATAATTCTCAAATGGGCATAACACAAGAACGTCAACGTCAAAGCCTCAATGAATCATCCTTTGCTGGTATTCCGGACTTGTCGCCTCAGCAGTTGCACCAAATTTGGCAGCGGACTTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1296

Protein Analysis

815

Amino Acids

88.16

Weight (kDa)

6.07

Isoelectric Point (pI)

56.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GIP1_N PF06972 17 - 56 3.2e-18 GBF-interacting protein 1 N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1913
AasI GACNNNNNNGTC 1 cut(s) 256
Acc16I TGCGCA 1 cut(s) 1004
Acc36I ACCTGC 2 cut(s) 25, 1913
AccB1I GGYRCC 3 cut(s) 1196, 1763, 1988
AccI GTMKAC 1 cut(s) 916
AccII CGCG 2 cut(s) 268, 1891
AccIII TCCGGA 1 cut(s) 2395
AciI CCGC 2 cut(s) 266, 2434
AclWI GGATC 5 cut(s) 334, 685, 1134, 2295, 2308
AcoI YGGCCR 1 cut(s) 2032
AcsI RAATTY 4 cut(s) 655, 1327, 1553, 2424
AfaI GTAC 9 cut(s) 150, 466, 1135, 1337, 1416, 1894, 1930, 1964, 2141
AfiI CCNNNNNNNGG 3 cut(s) 515, 598, 599
AhdI GACNNNNNGTC 1 cut(s) 967
AhlI ACTAGT 1 cut(s) 308
AjnI CCWGG 3 cut(s) 260, 514, 1759
AleI CACNNNNGTG 1 cut(s) 279
Alw21I GWGCWC 1 cut(s) 548
Alw26I GTCTC 6 cut(s) 74, 242, 614, 1236, 1254, 1750
AlwI GGATC 5 cut(s) 334, 685, 1134, 2295, 2308
AlwNI CAGNNNCTG 1 cut(s) 1099
Aor13HI TCCGGA 1 cut(s) 2395
AoxI GGCC 4 cut(s) 263, 722, 1210, 2032
ApoI RAATTY 4 cut(s) 655, 1327, 1553, 2424
ArsI GACNNNNNNTTYG 2 cut(s) 613, 645
Asp700I GAANNNNTTC 1 cut(s) 707
AspLEI GCGC 2 cut(s) 787, 1005
AspS9I GGNCC 4 cut(s) 133, 723, 1358, 2049
AsuC2I CCSGG 2 cut(s) 45, 92
AsuHPI GGTGA 3 cut(s) 390, 494, 2162
AvaII GGWCC 3 cut(s) 133, 1358, 2049
AxyI CCTNAGG 2 cut(s) 1122, 1779
BaeGI GKGCMC 1 cut(s) 1314
BaeI ACNNNNGTAYC 2 cut(s) 1690, 1723
BalI TGGCCA 1 cut(s) 2034
BamHI GGATCC 1 cut(s) 2300
BanI GGYRCC 3 cut(s) 1196, 1763, 1988
BanII GRGCYC 3 cut(s) 548, 605, 1938
BauI CACGAG 1 cut(s) 541
BbsI GAAGAC 3 cut(s) 963, 1683, 2184
Bbv12I GWGCWC 1 cut(s) 548
BbvCI CCTCAGC 3 cut(s) 1746, 1800, 2409
BccI CCATC 8 cut(s) 52, 497, 1690, 1906, 1947, 2020, 2108, 2141
BceAI ACGGC 3 cut(s) 95, 131, 1006
BciT130I CCWGG 3 cut(s) 262, 516, 1761
BciVI GTATCC 2 cut(s) 1312, 2303
BcnI CCSGG 2 cut(s) 45, 92
BcoDI GTCTC 6 cut(s) 74, 242, 614, 1236, 1254, 1750
BcuI ACTAGT 1 cut(s) 308
BfaI CTAG 5 cut(s) 309, 750, 1433, 1460, 2109
BfuAI ACCTGC 2 cut(s) 25, 1913
BfuI GTATCC 2 cut(s) 1312, 2303
BglII AGATCT 1 cut(s) 102
BmcAI AGTACT 1 cut(s) 466
Bme1390I CCNGG 5 cut(s) 45, 92, 262, 516, 1761
Bme18I GGWCC 3 cut(s) 133, 1358, 2049
BmeRI GACNNNNNGTC 1 cut(s) 967
BmgT120I GGNCC 4 cut(s) 133, 723, 1358, 2049
BmrFI CCNGG 5 cut(s) 45, 92, 262, 516, 1761
BmrI ACTGGG 1 cut(s) 1941
BmsI GCATC 8 cut(s) 475, 506, 631, 643, 922, 1285, 1381, 1793
BmuI ACTGGG 1 cut(s) 1941
BoxI GACNNNNGTC 1 cut(s) 35
BpiI GAAGAC 3 cut(s) 963, 1683, 2184
BplI GAGNNNNNCTC 2 cut(s) 1772, 1804
Bpu10I CCTNAGC 4 cut(s) 547, 1746, 1800, 2409
BpuEI CTTGAG 1 cut(s) 56
BpuMI CCSGG 2 cut(s) 45, 92
BsaI GGTCTC 2 cut(s) 1236, 1750
BsaJI CCNNGG 4 cut(s) 44, 1740, 2035, 2304
BsaWI WCCGGW 1 cut(s) 2395
BsaXI ACNNNNNCTCC 4 cut(s) 141, 171, 288, 318
Bsc4I CCNNNNNNNGG 3 cut(s) 515, 598, 599
Bse1I ACTGG 3 cut(s) 841, 912, 1936
Bse21I CCTNAGG 2 cut(s) 1122, 1779
Bse3DI GCAATG 1 cut(s) 1904
BseAI TCCGGA 1 cut(s) 2395
BseBI CCWGG 3 cut(s) 262, 516, 1761
BseDI CCNNGG 4 cut(s) 44, 1740, 2035, 2304
BseGI GGATG 5 cut(s) 646, 1300, 1784, 2152, 2378
BseLI CCNNNNNNNGG 3 cut(s) 515, 598, 599
BseMI GCAATG 1 cut(s) 1904
BseNI ACTGG 3 cut(s) 841, 912, 1936
BseRI GAGGAG 2 cut(s) 149, 1290
BseSI GKGCMC 1 cut(s) 1314
BseYI CCCAGC 1 cut(s) 593
BsgI GTGCAG 2 cut(s) 83, 1728
Bsh1236I CGCG 2 cut(s) 268, 1891
BshFI GGCC 4 cut(s) 265, 724, 1212, 2034
BshNI GGYRCC 3 cut(s) 1196, 1763, 1988
BsiHKAI GWGCWC 1 cut(s) 548
BsiSI CCGG 4 cut(s) 44, 92, 1427, 2396
BslFI GGGAC 6 cut(s) 43, 61, 387, 1690, 2062, 2126
BslI CCNNNNNNNGG 3 cut(s) 515, 598, 599
BsmAI GTCTC 6 cut(s) 74, 242, 614, 1236, 1254, 1750
BsmFI GGGAC 6 cut(s) 43, 61, 387, 1690, 2062, 2126
BsmI GAATGC 2 cut(s) 709, 775
BsnI GGCC 4 cut(s) 265, 724, 1212, 2034
Bso31I GGTCTC 2 cut(s) 1236, 1750
Bsp1286I GDGCHC 4 cut(s) 548, 605, 1314, 1938
Bsp13I TCCGGA 1 cut(s) 2395
Bsp1407I TGTACA 1 cut(s) 1133
Bsp143I GATC 8 cut(s) 102, 326, 677, 947, 1126, 1612, 1651, 2300
Bsp19I CCATGG 3 cut(s) 1740, 2035, 2304
BspACI CCGC 2 cut(s) 266, 2434
BspANI GGCC 4 cut(s) 265, 724, 1212, 2034
BspEI TCCGGA 1 cut(s) 2395
BspFNI CGCG 2 cut(s) 268, 1891
BspHI TCATGA 1 cut(s) 1342
BspMI ACCTGC 2 cut(s) 25, 1913
BspPI GGATC 5 cut(s) 334, 685, 1134, 2295, 2308
BspT107I GGYRCC 3 cut(s) 1196, 1763, 1988
BspTNI GGTCTC 2 cut(s) 1236, 1750
BsrDI GCAATG 1 cut(s) 1904
BsrGI TGTACA 1 cut(s) 1133
BsrI ACTGG 3 cut(s) 841, 912, 1936
BssECI CCNNGG 4 cut(s) 44, 1740, 2035, 2304
BssMI GATC 8 cut(s) 102, 326, 677, 947, 1126, 1612, 1651, 2300
BssSI CACGAG 1 cut(s) 541
BssT1I CCWWGG 3 cut(s) 1740, 2035, 2304
Bst2BI CACGAG 1 cut(s) 541
Bst2UI CCWGG 3 cut(s) 262, 516, 1761
Bst4CI ACNGT 7 cut(s) 452, 1138, 1668, 1727, 2207, 2241, 2286
Bst6I CTCTTC 2 cut(s) 1578, 2172
BstAPI GCANNNNNTGC 1 cut(s) 40
BstAUI TGTACA 1 cut(s) 1133
BstC8I GCNNGC 2 cut(s) 1914, 1954
BstDSI CCRYGG 3 cut(s) 1740, 2035, 2304
BstF5I GGATG 5 cut(s) 646, 1300, 1784, 2152, 2378
BstFNI CGCG 2 cut(s) 268, 1891
BstHHI GCGC 2 cut(s) 787, 1005
BstKTI GATC 8 cut(s) 105, 329, 680, 950, 1129, 1615, 1654, 2303
BstMAI GTCTC 6 cut(s) 74, 242, 614, 1236, 1254, 1750
BstMBI GATC 8 cut(s) 102, 326, 677, 947, 1126, 1612, 1651, 2300
BstMWI GCNNNNNNNGC 6 cut(s) 12, 40, 494, 770, 1801, 2024
BstNI CCWGG 3 cut(s) 262, 516, 1761
BstNSI RCATGY 2 cut(s) 829, 1093
BstPAI GACNNNNGTC 1 cut(s) 35
BstSCI CCNGG 5 cut(s) 43, 90, 260, 514, 1759
BstSLI GKGCMC 1 cut(s) 1314
BstUI CGCG 2 cut(s) 268, 1891
BstV2I GAAGAC 3 cut(s) 963, 1683, 2184
BstX2I RGATCY 3 cut(s) 102, 677, 2300
BstYI RGATCY 3 cut(s) 102, 677, 2300
Bsu36I CCTNAGG 2 cut(s) 1122, 1779
BsuI GTATCC 2 cut(s) 1312, 2303
BsuRI GGCC 4 cut(s) 265, 724, 1212, 2034
BtgI CCRYGG 3 cut(s) 1740, 2035, 2304
BtsCI GGATG 5 cut(s) 646, 1300, 1784, 2152, 2378
BtsI GCAGTG 1 cut(s) 1711
BtsIMutI CAGTG 4 cut(s) 457, 1136, 1711, 2212
BveI ACCTGC 2 cut(s) 25, 1913
Cac8I GCNNGC 2 cut(s) 1914, 1954
CaiI CAGNNNCTG 1 cut(s) 1099
CciI TCATGA 1 cut(s) 1342
CfoI GCGC 2 cut(s) 787, 1005
Cfr13I GGNCC 4 cut(s) 133, 723, 1358, 2049
CseI GACGC 2 cut(s) 40, 897
CsiI ACCWGGT 1 cut(s) 1759
Csp6I GTAC 9 cut(s) 149, 465, 1134, 1336, 1415, 1893, 1929, 1963, 2140
CviAII CATG 9 cut(s) 130, 826, 1090, 1343, 1741, 1957, 2036, 2066, 2305
CviQI GTAC 9 cut(s) 149, 465, 1134, 1336, 1415, 1893, 1929, 1963, 2140
DpnI GATC 8 cut(s) 104, 328, 679, 949, 1128, 1614, 1653, 2302
DpnII GATC 8 cut(s) 102, 326, 677, 947, 1126, 1612, 1651, 2300
DrdI GACNNNNNNGTC 1 cut(s) 256
DriI GACNNNNNGTC 1 cut(s) 967
DseDI GACNNNNNNGTC 1 cut(s) 256
EaeI YGGCCR 1 cut(s) 2032
Eam1104I CTCTTC 2 cut(s) 1578, 2172
Eam1105I GACNNNNNGTC 1 cut(s) 967
EarI CTCTTC 2 cut(s) 1578, 2172
Ecl136II GAGCTC 1 cut(s) 546
Eco130I CCWWGG 3 cut(s) 1740, 2035, 2304
Eco24I GRGCYC 3 cut(s) 548, 605, 1938
Eco31I GGTCTC 2 cut(s) 1236, 1750
Eco32I GATATC 2 cut(s) 1447, 2252
Eco47I GGWCC 3 cut(s) 133, 1358, 2049
Eco53kI GAGCTC 1 cut(s) 546
Eco81I CCTNAGG 2 cut(s) 1122, 1779
EcoICRI GAGCTC 1 cut(s) 546
EcoO109I RGGNCCY 1 cut(s) 2049
EcoRII CCWGG 3 cut(s) 260, 514, 1759
EcoRV GATATC 2 cut(s) 1447, 2252
EcoT14I CCWWGG 3 cut(s) 1740, 2035, 2304
EcoT22I ATGCAT 1 cut(s) 646
EcoT38I GRGCYC 3 cut(s) 548, 605, 1938
ErhI CCWWGG 3 cut(s) 1740, 2035, 2304
FaeI CATG 9 cut(s) 133, 829, 1093, 1346, 1744, 1960, 2039, 2069, 2308
FaqI GGGAC 6 cut(s) 43, 61, 387, 1690, 2062, 2126
FatI CATG 9 cut(s) 129, 825, 1089, 1342, 1740, 1956, 2035, 2065, 2304
FauNDI CATATG 2 cut(s) 999, 1918
FblI GTMKAC 1 cut(s) 916
FokI GGATG 5 cut(s) 653, 1307, 1771, 2159, 2365
FriOI GRGCYC 3 cut(s) 548, 605, 1938
FspAI RTGCGCAY 1 cut(s) 1004
FspBI CTAG 5 cut(s) 309, 750, 1433, 1460, 2109
FspI TGCGCA 1 cut(s) 1004
GlaI GCGC 2 cut(s) 786, 1004
GsaI CCCAGC 1 cut(s) 597
HaeIII GGCC 4 cut(s) 265, 724, 1212, 2034
HapII CCGG 4 cut(s) 44, 92, 1427, 2396
HgaI GACGC 2 cut(s) 40, 897
HhaI GCGC 2 cut(s) 787, 1005
Hin1II CATG 9 cut(s) 133, 829, 1093, 1346, 1744, 1960, 2039, 2069, 2308
Hin6I GCGC 2 cut(s) 785, 1003
HinP1I GCGC 2 cut(s) 785, 1003
HincII GTYRAC 4 cut(s) 85, 537, 1626, 2357
HindII GTYRAC 4 cut(s) 85, 537, 1626, 2357
HindIII AAGCTT 1 cut(s) 1349
HinfI GANTC 9 cut(s) 67, 156, 257, 455, 818, 1598, 1622, 2233, 2375
HpaII CCGG 4 cut(s) 44, 92, 1427, 2396
HphI GGTGA 3 cut(s) 390, 494, 2162
Hpy188I TCNGA 9 cut(s) 619, 847, 865, 898, 1054, 1501, 1559, 1651, 1755
HpyAV CCTTC 8 cut(s) 405, 450, 519, 1016, 1108, 1154, 1267, 2289
HpyCH4III ACNGT 7 cut(s) 452, 1138, 1668, 1727, 2207, 2241, 2286
HpyCH4IV ACGT 3 cut(s) 672, 2353, 2359
HpyF10VI GCNNNNNNNGC 6 cut(s) 12, 40, 494, 770, 1801, 2024
HpySE526I ACGT 3 cut(s) 672, 2353, 2359
Hsp92II CATG 9 cut(s) 133, 829, 1093, 1346, 1744, 1960, 2039, 2069, 2308
HspAI GCGC 2 cut(s) 785, 1003
Kpn2I TCCGGA 1 cut(s) 2395
Kzo9I GATC 8 cut(s) 102, 326, 677, 947, 1126, 1612, 1651, 2300
LmnI GCTCC 5 cut(s) 397, 1117, 1277, 1429, 1941
LweI GCATC 8 cut(s) 475, 506, 631, 643, 922, 1285, 1381, 1793
MabI ACCWGGT 1 cut(s) 1759
MaeI CTAG 5 cut(s) 309, 750, 1433, 1460, 2109
MaeII ACGT 3 cut(s) 672, 2353, 2359
MaeIII GTNAC 3 cut(s) 125, 304, 341
MalI GATC 8 cut(s) 104, 328, 679, 949, 1128, 1614, 1653, 2302
MboI GATC 8 cut(s) 102, 326, 677, 947, 1126, 1612, 1651, 2300
MflI RGATCY 3 cut(s) 102, 677, 2300
MhlI GDGCHC 4 cut(s) 548, 605, 1314, 1938
MlsI TGGCCA 1 cut(s) 2034
MluNI TGGCCA 1 cut(s) 2034
MlyI GAGTC 4 cut(s) 76, 150, 266, 1631
MmeI TCCRAC 1 cut(s) 846
Mox20I TGGCCA 1 cut(s) 2034
Mph1103I ATGCAT 1 cut(s) 646
MroI TCCGGA 1 cut(s) 2395
MroXI GAANNNNTTC 1 cut(s) 707
MscI TGGCCA 1 cut(s) 2034
MseI TTAA 4 cut(s) 117, 576, 663, 1640
MslI CAYNNNNRTG 4 cut(s) 279, 639, 1739, 1983
Msp20I TGGCCA 1 cut(s) 2034
MspA1I CMGCKG 1 cut(s) 2434
MspI CCGG 4 cut(s) 44, 92, 1427, 2396
MspR9I CCNGG 5 cut(s) 45, 92, 262, 516, 1761
Mva1269I GAATGC 2 cut(s) 709, 775
MvaI CCWGG 3 cut(s) 262, 516, 1761
MvnI CGCG 2 cut(s) 268, 1891
MwoI GCNNNNNNNGC 6 cut(s) 12, 40, 494, 770, 1801, 2024
NciI CCSGG 2 cut(s) 45, 92
NcoI CCATGG 3 cut(s) 1740, 2035, 2304
NdeI CATATG 2 cut(s) 999, 1918
NdeII GATC 8 cut(s) 102, 326, 677, 947, 1126, 1612, 1651, 2300
NlaIII CATG 9 cut(s) 133, 829, 1093, 1346, 1744, 1960, 2039, 2069, 2308
NsbI TGCGCA 1 cut(s) 1004
NsiI ATGCAT 1 cut(s) 646
NspI RCATGY 2 cut(s) 829, 1093
OliI CACNNNNGTG 1 cut(s) 279
PagI TCATGA 1 cut(s) 1342
PaqCI CACCTGC 1 cut(s) 1913
PcsI WCGNNNNNNNCGW 1 cut(s) 952
PctI GAATGC 2 cut(s) 709, 775
PdmI GAANNNNTTC 1 cut(s) 707
PfeI GAWTC 5 cut(s) 455, 818, 1598, 2233, 2375
PfoI TCCNGGA 1 cut(s) 514
PleI GAGTC 4 cut(s) 75, 150, 265, 1630
PpsI GAGTC 4 cut(s) 75, 150, 265, 1630
PpuMI RGGWCCY 1 cut(s) 2049
PshAI GACNNNNGTC 1 cut(s) 35
Psp124BI GAGCTC 1 cut(s) 548
Psp5II RGGWCCY 1 cut(s) 2049
Psp6I CCWGG 3 cut(s) 260, 514, 1759
PspFI CCCAGC 1 cut(s) 593
PspGI CCWGG 3 cut(s) 260, 514, 1759
PspPI GGNCC 4 cut(s) 133, 723, 1358, 2049
PspPPI RGGWCCY 1 cut(s) 2049
PstNI CAGNNNCTG 1 cut(s) 1099
PsuI RGATCY 3 cut(s) 102, 677, 2300
RsaI GTAC 9 cut(s) 150, 466, 1135, 1337, 1416, 1894, 1930, 1964, 2141
RsaNI GTAC 9 cut(s) 149, 465, 1134, 1336, 1415, 1893, 1929, 1963, 2140
RseI CAYNNNNRTG 4 cut(s) 279, 639, 1739, 1983
SacI GAGCTC 1 cut(s) 548
SaqAI TTAA 4 cut(s) 117, 576, 663, 1640
Sau3AI GATC 8 cut(s) 102, 326, 677, 947, 1126, 1612, 1651, 2300
Sau96I GGNCC 4 cut(s) 133, 723, 1358, 2049
ScaI AGTACT 1 cut(s) 466
SchI GAGTC 4 cut(s) 76, 150, 266, 1631
ScrFI CCNGG 5 cut(s) 45, 92, 262, 516, 1761
SduI GDGCHC 4 cut(s) 548, 605, 1314, 1938
SexAI ACCWGGT 1 cut(s) 1759
SfaNI GCATC 8 cut(s) 475, 506, 631, 643, 922, 1285, 1381, 1793
SinI GGWCC 3 cut(s) 133, 1358, 2049
SmiMI CAYNNNNRTG 4 cut(s) 279, 639, 1739, 1983
SmlI CTYRAG 1 cut(s) 71
SmoI CTYRAG 1 cut(s) 71
SpeI ACTAGT 1 cut(s) 308
SsiI CCGC 2 cut(s) 266, 2434
SspI AATATT 3 cut(s) 1400, 1564, 1855
SspMI CTAG 5 cut(s) 309, 750, 1433, 1460, 2109
SstI GAGCTC 1 cut(s) 548
StyD4I CCNGG 5 cut(s) 43, 90, 260, 514, 1759
StyI CCWWGG 3 cut(s) 1740, 2035, 2304
TaaI ACNGT 7 cut(s) 452, 1138, 1668, 1727, 2207, 2241, 2286
TaiI ACGT 3 cut(s) 675, 2356, 2362
TaqI TCGA 1 cut(s) 2180
TaqII GACCGA 2 cut(s) 934, 1806
TatI WGTACW 4 cut(s) 464, 1133, 1962, 2139
TauI GCSGC 1 cut(s) 268
TfiI GAWTC 5 cut(s) 455, 818, 1598, 2233, 2375
Tru1I TTAA 4 cut(s) 117, 576, 663, 1640
Tru9I TTAA 4 cut(s) 117, 576, 663, 1640
TscAI CASTG 4 cut(s) 457, 1136, 1711, 2212
TspDTI ATGAA 9 cut(s) 432, 732, 747, 831, 1100, 1290, 1704, 2054, 2388
TspGWI ACGGA 1 cut(s) 701
TspRI CASTG 4 cut(s) 457, 1136, 1711, 2212
VpaK11BI GGWCC 3 cut(s) 133, 1358, 2049
XapI RAATTY 4 cut(s) 655, 1327, 1553, 2424
XceI RCATGY 2 cut(s) 829, 1093
XcmI CCANNNNNNNNNTGG 1 cut(s) 2042
XmiI GTMKAC 1 cut(s) 916
XmnI GAANNNNTTC 1 cut(s) 707
XspI CTAG 5 cut(s) 309, 750, 1433, 1460, 2109
ZrmI AGTACT 1 cut(s) 466
Zsp2I ATGCAT 1 cut(s) 646
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.