Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0008876

Physical Location & Seq

Genomic Coordinates Forward (+)

10848614 .. 10854621

Gene Structure 6008 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g13170.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2409 bp

ATGGGGAGCGAGACGAAGAATGGAGTGGGGGTAGCGGCGGCGCAGTTTCCGCCGACGACGAGGAAGATTATACAGAGCCTGAAGGAGATTGTTAACTGTCCGGAGCCTGAGATCTACTCGGTTCTTAAAGAGTGCAATATGGACCCGAGCGACGCCGTTCAGCGCCTGCTCTCTTTAGATACTTTTCATGAAGTCAGGAGCAAACGTGAAAGAAGGAAAGAGATAAAGGAGACACAGGACACCAAGTCGCGAGTTCACAATGCAGGTTCAAATCGTGGTGCTAGAGGTATTAGCGAGCGTACTGGTGGATGGTGTGGATCAACTCAAACCAGTTCCAATGAGCTTGGTAAAGCAGTGTATAAGGGACAGAATGGGTTTGTTGCTCCTTCACCTCATACTTCAGCTTCTCACTTTACAGGAGGAACCACAAGCCAGCAACCTTCATCTCAGCATGAATCTTTTAGTACTTCCATAAGGCCAGGTGATGCAGTCTCTGCATCTCTACAACCTTCTGCGGGAAATCAATCTACTTATGGAACCAACTTGGGGAATCTTTCAATGGCCGACATTGTTAAGATGCGTAGACAACCTAGCATGGGCTTACGTATTTCATCTGATACATCTTCACATCAGGATGCATTTTCAACATATTCATGTAATAGCCACGTGGAATCTTCCCAAACAAAGATGTACCAATATATGCACTCTCATAATCCTCGTGTGTCAGAGATGTTACATAAAACTGGCGATAGTGCTGGACAGAATGATTTCCATGATGAATGGCATGTGATTGAGCAGCCAACAGCTGCAAATAGGTCATCAATTTTAAATGCAAATCAATCTAAGTTTTATATCAATGAATCCAACGTGCCAAGGGATTACCAGTCACATAAGGTCCAAGAATCAGAGGGGAATATTAGTAGCGAAAGTGTTAGCTCAGATTGCAATGCTTATGCTTTTGCTTCCAGTAGACAGAAGATGGCGGTTACTTCCTGTGGAAAATCATATTGTGTTGATGACTTGTCTTCCAATTCTAGTTCCTACGAATCTCATAGGTCTGCATATGAGAATGGAGAAGCAGCTACTGTGAGAATGCAACAACTGAATCTAAGAAAGGATGAAGATCGAGATAATTGCGCAGTAGTCCTTCCAAATAATTTGCAAGAATTGGCTGCCGATTGTTCGCATTTGAGTTTTGGCACCTTTAGACCGGCTCAAAGTTCTGCATTATCGAGCAAGCCATCTAATTCCTTGAAAAATGACTTGGGAGGATCTTCTGTAGGAGTAGATGTTTTCTCAGCCGCTCGCTTGGATACAAGAAATTCAGGGTATAAGCACGACGAATTTCGTGGATCCTTATATGATACTAGAAGAGCAGACATAGGTTATGATTTGCCTGTACCTTCACAGCGAGAACCAATAAAACAGGATATCCATGAAGCAACCCATGGATATAAAGACATTACTACCTCATCTCTACATAATTTTAATTCTGAGAAGATTGAAAAAGCAACTTCTGGATTGCCTTTTGCAAAGGCAGATCCCGAATTCAGAAATGTACCTAAAAATGATATGCCATATTCAGATTCTGTACGAAGTGACCTATTGGAGTCATTCCAACAGTTTTTGGTGAAGCCACCTGTGCCTTCAAGATATAGCAGTGCAGTTTCTTCTGTAACCAACCCAACAATTTCCATGTCTGACGCTCTGAGACCAGGCACCGTACCTTTGTCTGAGGCATGTTCTGTACTTCCTCAGCGTCATACATCCCGTTCATACGCTCAACCTACCCTTTCTTACAAACAGTTAGCAAACAGTATGGTCTATAAACCTTCCATGCCACAGGCTCAGAACTACTCGCCCGTGCCACCAAATTTGCAGCAAGAGTATGTAGGTGGTAGTGTATTCCATCAGTCAGGGGCTAGCATGGAATACAACTTCCCACAGTATAGTGGAGCCTCAGTAAGCAGATTGCCTACATCTGCTGCTGCTGCTGTCACTGGTCATGTAAGTTTTGGGGCCTCTAATAACACTCACGGGAGTTTATTGCATAATGCATCTGCCACTCCTGGCAGCATACCCGACTATGATGATGTATTCCTCCCCCAGTATAAAGATGGAAACCATTTAGCCACTCTTTATCAGAGTTCAAGAACATTGCCTTCCGTTCCAGACAGTGCATTTAATAACTTACTTGGGCATAATCAACAGCATGCAGGATATCGACAAGGGCGGGCTGGACAGCTGCCCACCAAGTTGCAGAATTATCGGGGACACCCCGATTTCTATTTTTCCCAAAAGGACGTAACACAAGAACATCAGCGACAACGCCTCGATGATTTAGGCTTAGGAGGATTCCAAGACCTGTCACCTCAGCAGCTGCACCAGATTTGGCAGCGGACCTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1296

Protein Analysis

803

Amino Acids

88.07

Weight (kDa)

6.88

Isoelectric Point (pI)

56.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008876)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g38300 FvH4_6g38300 FvH4_6g38300 FvH4_6g38300 FvH4_6g38300
malus_domestica	MD09G1151000.v1.1 MD17G1138600.v1.1
prunus_persica	Prupe.3G173800_v2.0.a1 Prupe.3G173800_v2.0.a1 Prupe.3G173800_v2.0.a1 Prupe.3G173800_v2.0.a1
pyrus_communis	pycom09g07080 pycom17g13170
rosa_chinensis	RchiOBHm_Chr2g0151631
rosa_laevigata	RLG00000020565
rosa_multiflora	Rmu_sc0005287.1_g000004
rosa_roxburghii	Rroxscaffold_2G00096300
rosa_rugosa	Rorug02G0427400
rosa_samantha	Rh2AG488300 Rh2BG500900 Rh2CG474800 Rh2DG512000
rosa_wichuraiana	Rw2G040030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1138
Acc36I	ACCTGC	1 cut(s)	254
AccB1I	GGYRCC	2 cut(s)	1199, 1718
AccBSI	CCGCTC	1 cut(s)	1304
AccI	GTMKAC	2 cut(s)	583, 970
AccII	CGCG	1 cut(s)	250
AccIII	TCCGGA	1 cut(s)	100
AciI	CCGC	8 cut(s)	35, 38, 50, 515, 983, 1302, 2233, 2398
AclWI	GGATC	5 cut(s)	325, 1279, 1347, 1360, 1535
AcoI	YGGCCR	1 cut(s)	561
AcsI	RAATTY	4 cut(s)	1321, 1343, 1547, 1873
AcuI	CTGAAG	2 cut(s)	101, 384
AcvI	CACGTG	1 cut(s)	667
AcyI	GRCGYC	1 cut(s)	153
AfaI	GTAC	8 cut(s)	301, 466, 692, 1401, 1560, 1593, 1725, 1749
AfiI	CCNNNNNNNGG	3 cut(s)	515, 546, 596
AgsI	TTSAA	7 cut(s)	270, 558, 645, 1255, 1505, 1650, 2151
AhdI	GACNNNNNGTC	1 cut(s)	244
AjnI	CCWGG	3 cut(s)	478, 1714, 2068
AjuI	GAANNNNNNNTTGG	2 cut(s)	1247, 1279
AluBI	AGCT	7 cut(s)	343, 404, 806, 936, 1082, 2245, 2380
AluI	AGCT	7 cut(s)	343, 404, 806, 936, 1082, 2245, 2380
Alw26I	GTCTC	4 cut(s)	5, 224, 496, 1705
AlwI	GGATC	5 cut(s)	325, 1279, 1347, 1360, 1535
AlwNI	CAGNNNCTG	6 cut(s)	79, 166, 494, 1085, 1589, 2380
Ama87I	CYCGRG	1 cut(s)	145
Aor13HI	TCCGGA	1 cut(s)	100
AoxI	GGCC	3 cut(s)	476, 561, 2019
ApoI	RAATTY	4 cut(s)	1321, 1343, 1547, 1873
Asp700I	GAANNNNTTC	1 cut(s)	767
AspLEI	GCGC	3 cut(s)	43, 165, 1139
AspS9I	GGNCC	4 cut(s)	142, 895, 2019, 2400
AsuHPI	GGTGA	4 cut(s)	381, 494, 1642, 2361
AsuNHI	GCTAGC	1 cut(s)	1922
AvaI	CYCGRG	1 cut(s)	145
AvaII	GGWCC	3 cut(s)	142, 895, 2400
BamHI	GGATCC	1 cut(s)	1352
BanI	GGYRCC	2 cut(s)	1199, 1718
BauI	CACGAG	1 cut(s)	717
BbrPI	CACGTG	1 cut(s)	667
BbsI	GAAGAC	1 cut(s)	1017
BbvCI	CCTCAGC	2 cut(s)	1755, 2373
BccI	CCATC	5 cut(s)	303, 973, 1249, 1917, 2111
BceAI	ACGGC	1 cut(s)	140
BcgI	CGANNNNNNTGC	4 cut(s)	1116, 1150, 2249, 2283
BciT130I	CCWGG	3 cut(s)	480, 1716, 2070
BciVI	GTATCC	1 cut(s)	1306
BcoDI	GTCTC	4 cut(s)	5, 224, 496, 1705
BfaI	CTAG	5 cut(s)	282, 591, 1035, 1368, 1923
BfmI	CTRYAG	1 cut(s)	1278
BfoI	RGCGCY	1 cut(s)	166
BfuAI	ACCTGC	1 cut(s)	254
BfuI	GTATCC	1 cut(s)	1306
BglII	AGATCT	1 cut(s)	111
BmcAI	AGTACT	1 cut(s)	466
Bme1390I	CCNGG	3 cut(s)	480, 1716, 2070
Bme18I	GGWCC	3 cut(s)	142, 895, 2400
BmeRI	GACNNNNNGTC	1 cut(s)	244
BmeT110I	CYCGRG	1 cut(s)	145
BmgT120I	GGNCC	4 cut(s)	142, 895, 2019, 2400
BmiI	GGNNCC	9 cut(s)	105, 144, 424, 538, 1201, 1354, 1720, 1957, 2020
BmrFI	CCNGG	3 cut(s)	480, 1716, 2070
BmrI	ACTGGG	1 cut(s)	2101
BmsI	GCATC	5 cut(s)	475, 506, 567, 625, 2066
BmtI	GCTAGC	1 cut(s)	1926
BmuI	ACTGGG	1 cut(s)	2101
BpiI	GAAGAC	1 cut(s)	1017
BplI	GAGNNNNNCTC	2 cut(s)	101, 133
Bpu10I	CCTNAGC	3 cut(s)	1755, 2347, 2373
BsaAI	YACGTR	2 cut(s)	605, 667
BsaBI	GATNNNNATC	1 cut(s)	1122
BsaHI	GRCGYC	1 cut(s)	153
BsaI	GGTCTC	1 cut(s)	1705
BsaJI	CCNNGG	2 cut(s)	872, 1447
BsaWI	WCCGGW	1 cut(s)	100
BsaXI	ACNNNNNCTCC	8 cut(s)	15, 45, 190, 220, 1275, 1305, 1947, 1977
Bsc4I	CCNNNNNNNGG	3 cut(s)	515, 546, 596
Bse118I	RCCGGY	1 cut(s)	1210
Bse1I	ACTGG	7 cut(s)	307, 330, 748, 883, 966, 2005, 2107
Bse3DI	GCAATG	2 cut(s)	952, 2156
Bse8I	GATNNNNATC	1 cut(s)	1122
BseAI	TCCGGA	1 cut(s)	100
BseBI	CCWGG	3 cut(s)	480, 1716, 2070
BseDI	CCNNGG	2 cut(s)	872, 1447
BseGI	GGATG	4 cut(s)	314, 640, 1123, 1766
BseJI	GATNNNNATC	1 cut(s)	1122
BseLI	CCNNNNNNNGG	3 cut(s)	515, 546, 596
BseMI	GCAATG	2 cut(s)	952, 2156
BseNI	ACTGG	7 cut(s)	307, 330, 748, 883, 966, 2005, 2107
BsgI	GTGCAG	2 cut(s)	1683, 2366
Bsh1236I	CGCG	1 cut(s)	250
BshFI	GGCC	3 cut(s)	478, 563, 2021
BshNI	GGYRCC	2 cut(s)	1199, 1718
BsiHKCI	CYCGRG	1 cut(s)	145
BsiSI	CCGG	2 cut(s)	101, 1211
BslFI	GGGAC	2 cut(s)	378, 2286
BslI	CCNNNNNNNGG	3 cut(s)	515, 546, 596
BsmAI	GTCTC	4 cut(s)	5, 224, 496, 1705
BsmBI	CGTCTC	1 cut(s)	5
BsmFI	GGGAC	2 cut(s)	378, 2286
BsmI	GAATGC	1 cut(s)	1098
BsnI	GGCC	3 cut(s)	478, 563, 2021
Bso31I	GGTCTC	1 cut(s)	1705
BsoBI	CYCGRG	1 cut(s)	145
Bsp13I	TCCGGA	1 cut(s)	100
Bsp143I	GATC	6 cut(s)	111, 317, 1123, 1271, 1352, 1540
Bsp19I	CCATGG	1 cut(s)	1447
Bsp68I	TCGCGA	1 cut(s)	250
BspACI	CCGC	8 cut(s)	35, 38, 50, 515, 983, 1302, 2233, 2398
BspANI	GGCC	3 cut(s)	478, 563, 2021
BspEI	TCCGGA	1 cut(s)	100
BspFNI	CGCG	1 cut(s)	250
BspHI	TCATGA	1 cut(s)	187
BspLI	GGNNCC	9 cut(s)	105, 144, 424, 538, 1201, 1354, 1720, 1957, 2020
BspMI	ACCTGC	1 cut(s)	254
BspOI	GCTAGC	1 cut(s)	1926
BspPI	GGATC	5 cut(s)	325, 1279, 1347, 1360, 1535
BspQI	GCTCTTC	1 cut(s)	1366
BspT107I	GGYRCC	2 cut(s)	1199, 1718
BspTNI	GGTCTC	1 cut(s)	1705
BsrBI	CCGCTC	1 cut(s)	1304
BsrDI	GCAATG	2 cut(s)	952, 2156
BsrFI	RCCGGY	1 cut(s)	1210
BsrI	ACTGG	7 cut(s)	307, 330, 748, 883, 966, 2005, 2107
BssAI	RCCGGY	1 cut(s)	1210
BssECI	CCNNGG	2 cut(s)	872, 1447
BssMI	GATC	6 cut(s)	111, 317, 1123, 1271, 1352, 1540
BssNI	GRCGYC	1 cut(s)	153
BssSI	CACGAG	1 cut(s)	717
BssT1I	CCWWGG	2 cut(s)	872, 1447
Bst2BI	CACGAG	1 cut(s)	717
Bst2UI	CCWGG	3 cut(s)	480, 1716, 2070
Bst4CI	ACNGT	8 cut(s)	98, 1087, 1623, 1723, 1806, 1817, 1947, 2177
Bst6I	CTCTTC	1 cut(s)	1366
BstACI	GRCGYC	1 cut(s)	153
BstAPI	GCANNNNNTGC	1 cut(s)	494
BstBAI	YACGTR	2 cut(s)	605, 667
BstC8I	GCNNGC	8 cut(s)	167, 296, 434, 1238, 1306, 1924, 2214, 2235
BstDSI	CCRYGG	1 cut(s)	1447
BstF5I	GGATG	4 cut(s)	314, 640, 1123, 1766
BstFNI	CGCG	1 cut(s)	250
BstH2I	RGCGCY	1 cut(s)	166
BstHHI	GCGC	3 cut(s)	43, 165, 1139
BstKTI	GATC	6 cut(s)	114, 320, 1126, 1274, 1355, 1543
BstMAI	GTCTC	4 cut(s)	5, 224, 496, 1705
BstMBI	GATC	6 cut(s)	111, 317, 1123, 1271, 1352, 1540
BstMWI	GCNNNNNNNGC	5 cut(s)	49, 494, 942, 1642, 1991
BstNI	CCWGG	3 cut(s)	480, 1716, 2070
BstNSI	RCATGY	3 cut(s)	788, 1743, 2216
BstSCI	CCNGG	3 cut(s)	478, 1714, 2068
BstSFI	CTRYAG	1 cut(s)	1278
BstSNI	TACGTA	1 cut(s)	605
BstUI	CGCG	1 cut(s)	250
BstV2I	GAAGAC	1 cut(s)	1017
BstX2I	RGATCY	4 cut(s)	111, 1271, 1352, 1540
BstYI	RGATCY	4 cut(s)	111, 1271, 1352, 1540
BsuI	GTATCC	1 cut(s)	1306
BsuRI	GGCC	3 cut(s)	478, 563, 2021
BtgI	CCRYGG	1 cut(s)	1447
BtsCI	GGATG	4 cut(s)	314, 640, 1123, 1766
BtsI	GCAGTG	2 cut(s)	360, 1666
BtsIMutI	CAGTG	4 cut(s)	360, 1666, 1998, 2182
BtuMI	TCGCGA	1 cut(s)	250
BveI	ACCTGC	1 cut(s)	254
Cac8I	GCNNGC	8 cut(s)	167, 296, 434, 1238, 1306, 1924, 2214, 2235
CaiI	CAGNNNCTG	6 cut(s)	79, 166, 494, 1085, 1589, 2380
CciI	TCATGA	1 cut(s)	187
CfoI	GCGC	3 cut(s)	43, 165, 1139
Cfr10I	RCCGGY	1 cut(s)	1210
Cfr13I	GGNCC	4 cut(s)	142, 895, 2019, 2400
CseI	GACGC	3 cut(s)	161, 1712, 1748
Csp6I	GTAC	8 cut(s)	300, 465, 691, 1400, 1559, 1592, 1724, 1748
CspCI	CAANNNNNGTGG	2 cut(s)	1857, 1892
CviQI	GTAC	8 cut(s)	300, 465, 691, 1400, 1559, 1592, 1724, 1748
DpnI	GATC	6 cut(s)	113, 319, 1125, 1273, 1354, 1542
DpnII	GATC	6 cut(s)	111, 317, 1123, 1271, 1352, 1540
DraI	TTTAAA	1 cut(s)	828
DriI	GACNNNNNGTC	1 cut(s)	244
EaeI	YGGCCR	1 cut(s)	561
Eam1104I	CTCTTC	1 cut(s)	1366
Eam1105I	GACNNNNNGTC	1 cut(s)	244
EarI	CTCTTC	1 cut(s)	1366
EciI	GGCGGA	1 cut(s)	39
Eco105I	TACGTA	1 cut(s)	605
Eco130I	CCWWGG	2 cut(s)	872, 1447
Eco31I	GGTCTC	1 cut(s)	1705
Eco32I	GATATC	2 cut(s)	1432, 2222
Eco47I	GGWCC	3 cut(s)	142, 895, 2400
Eco57I	CTGAAG	2 cut(s)	101, 384
Eco72I	CACGTG	1 cut(s)	667
Eco88I	CYCGRG	1 cut(s)	145
EcoO109I	RGGNCCY	1 cut(s)	2019
EcoRI	GAATTC	1 cut(s)	1547
EcoRII	CCWGG	3 cut(s)	478, 1714, 2068
EcoRV	GATATC	2 cut(s)	1432, 2222
EcoT14I	CCWWGG	2 cut(s)	872, 1447
EcoT22I	ATGCAT	2 cut(s)	640, 2059
ErhI	CCWWGG	2 cut(s)	872, 1447
Esp3I	CGTCTC	1 cut(s)	5
FaqI	GGGAC	2 cut(s)	378, 2286
FauI	CCCGC	2 cut(s)	508, 2226
FauNDI	CATATG	1 cut(s)	1063
FblI	GTMKAC	2 cut(s)	583, 970
FokI	GGATG	4 cut(s)	321, 647, 1130, 1753
FspBI	CTAG	5 cut(s)	282, 591, 1035, 1368, 1923
FspI	TGCGCA	1 cut(s)	1138
GlaI	GCGC	3 cut(s)	42, 164, 1138
HaeII	RGCGCY	1 cut(s)	166
HaeIII	GGCC	3 cut(s)	478, 563, 2021
HapII	CCGG	2 cut(s)	101, 1211
HgaI	GACGC	3 cut(s)	161, 1712, 1748
HhaI	GCGC	3 cut(s)	43, 165, 1139
Hin1I	GRCGYC	1 cut(s)	153
Hin6I	GCGC	3 cut(s)	41, 163, 1137
HinP1I	GCGC	3 cut(s)	41, 163, 1137
HincII	GTYRAC	1 cut(s)	94
HindII	GTYRAC	1 cut(s)	94
HpaI	GTTAAC	1 cut(s)	94
HpaII	CCGG	2 cut(s)	101, 1211
HphI	GGTGA	4 cut(s)	381, 494, 1642, 2361
Hpy166II	GTNNAC	4 cut(s)	94, 256, 584, 971
Hpy8I	GTNNAC	4 cut(s)	94, 256, 584, 971
Hpy99I	CGWCG	4 cut(s)	58, 61, 155, 1343
HpyCH4III	ACNGT	8 cut(s)	98, 1087, 1623, 1723, 1806, 1817, 1947, 2177
HpyCH4IV	ACGT	5 cut(s)	205, 604, 666, 867, 2304
HpyF10VI	GCNNNNNNNGC	5 cut(s)	49, 494, 942, 1642, 1991
HpySE526I	ACGT	5 cut(s)	205, 604, 666, 867, 2304
Hsp92I	GRCGYC	1 cut(s)	153
HspAI	GCGC	3 cut(s)	41, 163, 1137
Kpn2I	TCCGGA	1 cut(s)	100
KspAI	GTTAAC	1 cut(s)	94
Kzo9I	GATC	6 cut(s)	111, 317, 1123, 1271, 1352, 1540
LguI	GCTCTTC	1 cut(s)	1366
LmnI	GCTCC	5 cut(s)	6, 103, 198, 388, 1955
LweI	GCATC	5 cut(s)	475, 506, 567, 625, 2066
MaeI	CTAG	5 cut(s)	282, 591, 1035, 1368, 1923
MaeII	ACGT	5 cut(s)	205, 604, 666, 867, 2304
MaeIII	GTNAC	8 cut(s)	732, 885, 985, 1598, 1675, 1996, 2305, 2367
MalI	GATC	6 cut(s)	113, 319, 1125, 1273, 1354, 1542
MbiI	CCGCTC	1 cut(s)	1304
MboI	GATC	6 cut(s)	111, 317, 1123, 1271, 1352, 1540
MflI	RGATCY	4 cut(s)	111, 1271, 1352, 1540
MlyI	GAGTC	1 cut(s)	1619
MmeI	TCCRAC	2 cut(s)	888, 1642
Mph1103I	ATGCAT	2 cut(s)	640, 2059
MroI	TCCGGA	1 cut(s)	100
MroXI	GAANNNNTTC	1 cut(s)	767
MseI	TTAA	6 cut(s)	93, 126, 573, 827, 1488, 2184
MslI	CAYNNNNRTG	2 cut(s)	633, 652
MspA1I	CMGCKG	4 cut(s)	806, 2245, 2380, 2398
MspI	CCGG	2 cut(s)	101, 1211
MspR9I	CCNGG	3 cut(s)	480, 1716, 2070
Mva1269I	GAATGC	1 cut(s)	1098
MvaI	CCWGG	3 cut(s)	480, 1716, 2070
MvnI	CGCG	1 cut(s)	250
MwoI	GCNNNNNNNGC	5 cut(s)	49, 494, 942, 1642, 1991
NcoI	CCATGG	1 cut(s)	1447
NdeI	CATATG	1 cut(s)	1063
NdeII	GATC	6 cut(s)	111, 317, 1123, 1271, 1352, 1540
NheI	GCTAGC	1 cut(s)	1922
NlaIV	GGNNCC	9 cut(s)	105, 144, 424, 538, 1201, 1354, 1720, 1957, 2020
NmuCI	GTSAC	4 cut(s)	885, 1598, 1996, 2367
NruI	TCGCGA	1 cut(s)	250
NsbI	TGCGCA	1 cut(s)	1138
NsiI	ATGCAT	2 cut(s)	640, 2059
NspI	RCATGY	3 cut(s)	788, 1743, 2216
PaeI	GCATGC	1 cut(s)	2216
PagI	TCATGA	1 cut(s)	187
PciSI	GCTCTTC	1 cut(s)	1366
PctI	GAATGC	1 cut(s)	1098
PdmI	GAANNNNTTC	1 cut(s)	767
PfeI	GAWTC	9 cut(s)	455, 550, 671, 860, 902, 1046, 1105, 1586, 2355
PleI	GAGTC	1 cut(s)	1618
PmaCI	CACGTG	1 cut(s)	667
PmlI	CACGTG	1 cut(s)	667
PpsI	GAGTC	1 cut(s)	1618
Ppu21I	YACGTR	2 cut(s)	605, 667
Psp6I	CCWGG	3 cut(s)	478, 1714, 2068
PspCI	CACGTG	1 cut(s)	667
PspGI	CCWGG	3 cut(s)	478, 1714, 2068
PspN4I	GGNNCC	9 cut(s)	105, 144, 424, 538, 1201, 1354, 1720, 1957, 2020
PspPI	GGNCC	4 cut(s)	142, 895, 2019, 2400
PstNI	CAGNNNCTG	6 cut(s)	79, 166, 494, 1085, 1589, 2380
PsuI	RGATCY	4 cut(s)	111, 1271, 1352, 1540
PvuII	CAGCTG	3 cut(s)	806, 2245, 2380
RruI	TCGCGA	1 cut(s)	250
RsaI	GTAC	8 cut(s)	301, 466, 692, 1401, 1560, 1593, 1725, 1749
RsaNI	GTAC	8 cut(s)	300, 465, 691, 1400, 1559, 1592, 1724, 1748
RseI	CAYNNNNRTG	2 cut(s)	633, 652
SapI	GCTCTTC	1 cut(s)	1366
SaqAI	TTAA	6 cut(s)	93, 126, 573, 827, 1488, 2184
Sau3AI	GATC	6 cut(s)	111, 317, 1123, 1271, 1352, 1540
Sau96I	GGNCC	4 cut(s)	142, 895, 2019, 2400
ScaI	AGTACT	1 cut(s)	466
SchI	GAGTC	1 cut(s)	1619
ScrFI	CCNGG	3 cut(s)	480, 1716, 2070
SfaNI	GCATC	5 cut(s)	475, 506, 567, 625, 2066
SfcI	CTRYAG	1 cut(s)	1278
SinI	GGWCC	3 cut(s)	142, 895, 2400
SmiMI	CAYNNNNRTG	2 cut(s)	633, 652
SnaBI	TACGTA	1 cut(s)	605
SphI	GCATGC	1 cut(s)	2216
SsiI	CCGC	8 cut(s)	35, 38, 50, 515, 983, 1302, 2233, 2398
SspI	AATATT	1 cut(s)	916
SspMI	CTAG	5 cut(s)	282, 591, 1035, 1368, 1923
StyD4I	CCNGG	3 cut(s)	478, 1714, 2068
StyI	CCWWGG	2 cut(s)	872, 1447
TaaI	ACNGT	8 cut(s)	98, 1087, 1623, 1723, 1806, 1817, 1947, 2177
TaiI	ACGT	5 cut(s)	208, 607, 669, 870, 2307
TaqI	TCGA	4 cut(s)	1126, 1232, 2224, 2334
TatI	WGTACW	2 cut(s)	464, 1747
TauI	GCSGC	3 cut(s)	38, 41, 1304
TfiI	GAWTC	9 cut(s)	455, 550, 671, 860, 902, 1046, 1105, 1586, 2355
Tru1I	TTAA	6 cut(s)	93, 126, 573, 827, 1488, 2184
Tru9I	TTAA	6 cut(s)	93, 126, 573, 827, 1488, 2184
TscAI	CASTG	4 cut(s)	360, 1666, 2005, 2182
TseFI	GTSAC	4 cut(s)	885, 1598, 1996, 2367
Tsp45I	GTSAC	4 cut(s)	885, 1598, 1996, 2367
TspGWI	ACGGA	1 cut(s)	2155
TspRI	CASTG	4 cut(s)	360, 1666, 2005, 2182
VpaK11BI	GGWCC	3 cut(s)	142, 895, 2400
XapI	RAATTY	4 cut(s)	1321, 1343, 1547, 1873
XceI	RCATGY	3 cut(s)	788, 1743, 2216
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2114
XmiI	GTMKAC	2 cut(s)	583, 970
XmnI	GAANNNNTTC	1 cut(s)	767
XspI	CTAG	5 cut(s)	282, 591, 1035, 1368, 1923
ZrmI	AGTACT	1 cut(s)	466
Zsp2I	ATGCAT	2 cut(s)	640, 2059

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.