Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0016495

Physical Location & Seq

Genomic Coordinates Forward (+)

37580656 .. 37583835

Gene Structure 3180 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g50510.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2118 bp

ATGAGTAGACAAATCACCACGCCGGTTAAGTTCCGCCCTCTACAGAACACAAGCGGCGACGAAGCTACCGCGGCCGCCGTAGTAGAAGAGCACCCGCTCCACATTCTATGGCGCCACCAGATTCTGGACCCGGACTCCAACATTGTATCCGTCTGGCACCACATCTTCCTCGTAGTCTGCATTGTCGCGCTCTTCATCGACCCTCTCTACTTCTACCTCCCCTTCGTCGAAGGCGACGCCTGCCTCTCTACCGACAACCGCCTCTCCGTCGTCGTCACCTTCATCCGCTCCTTCACCGACCTCTTCTACCTCTTCCACATGCTCATCAAGTTCCGCACCGCCTTCATCGCCCCCAGCTCTAGGGTTTTCGGCCGCGGCGATCTTGTCATGGACCCCAGACAGATCGCCGTCAGGTATCTCAAGTCCGACTTCATCGTTGATCTCGCTGCCACTCTTCCTATTCCGCAGATTATCATCTGGCTGGTGATCCCCGCAACCAAAAATTCCAGCGCAGATCATGCCAACAGCACTCTGGCCCTTTTCGTGCTTATCCAATATATTCCTAGACTGTTTCTCATCTTTCCTTTGAATCAGAAAATTGTGAAGACTACTGGTGTTGTGGCCAAGACTGCCTGGGCGGGAGCCGCATACAATTTGCTTCTTTTTTATCTAGCCAGTCATATAGTTGGAGCTGTGTTTTATATTTCTGCCATAGGGCGGCAATTCCAGTGTTGGAAAACCGAGTGTATAGCAGAGAACGAAGAGAATGGTGTGCTTTGCCTCAACAGATTCCTGGATTGCAAGAGCTTGGAGCTACCAGAACGGGAATATTGGGCCAACGTTACCAAAGTAATTAAAAACTGTAATTGGGATGACGAAGAGATCGATTTTAAGATTGGAATCTTTGGGGACGCTTTCAAGAGTAAAGCCGCAATGTCAGGCTTTGTTAGGAAGTACTTGTATTGTTTCTGGTGGGGTTTAAACAAACTATGCTCATACGGACAGACTTTGAAGACGAGCACATATCTCGGCGAGACAATGTTTTCCATTATCTTGTGCCTTTCTGGTTTGATTTTGTTCTCCCTGTTGATTGGCAACATGCAGACTTATCTGCAATCAATGTCAAAAAAGGTTGAAGAATCGAGGATTAAGCAAAGAGATACGGATGAGTGGATGAGGCATCGCCAGTTACCTGAACCCTTGCAAGAACGTGTTCGTCGATTTATGCAATACCAATGGTTTGCCACACGAGGAGTTGATGAAGAATCCATATTGCACTCGTTACCTGTTGACCTCTGCCATGAAATCCAGCGGCATCTATGTCTTTCCCTTGTTCGCCGTGTCCCTTTTTTCTCACAAATGGATGACCAACTTCTTGATGCCATATGTGAGCGTCTCGTCTCATCCTTGACTATTAAAGGCACATACATTGTTCAAGAAGGTGACCCAGTAAATGAGATGCTGTTTATTATTAGAGGGAAACTTGAGAGCTCCACAACCAATGGAGGGAGGACTGGCTTCTTCAACTCCATCACCCTAGGACCAGGTGACTTCTGCGGTGAGGAACTACTGACATGGGCATTGATGCCAAGCTCTAGCCTTAACATGCCTTCTTCGACTCGTACTGTGAGAGCCCTCACTGAAGTTGAAGCTTTTGCGCTTCGAGCTGAGGACCTTAAGTTTGTAGCAAGTCAGTTCAAACGTCTTCACAGCAAGAAACTACAGCATGCCTTTAGGTACTATTCTCACCAATGGAGGACATGGGGTGCTTGCTTCATACAGGCTGCTTGGAGAAGGTTTATAAAGAGGAAGATGGCAAAGGACTTGGCTATGCAGGAGAGCTTATACTATATGCATGCACCTGGCCAAGAGGAAGAGGGTTACTACTACGACGAAGAACAAGCAAATCTTTTAAACCAGGAGGATGGTGAGAGTTCATCGACAGGGGAGAAGTTAACCATCTTCCAGCATCTTGGGGCCACATTTCTGGCTTCCAAATTTGCTGCAAATACAAGAAGAGGGATCATGCAGAAAGCTCAGCTGGTTGATCCTGATTCAACTAGTTTGCAGATGCCTCGGTTGTTTAAGCCAGATGAGCCTGATTTTTCTGTAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005262 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0008150 GO:0008324 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015085 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0016043 GO:0016049 GO:0016324 GO:0019725 GO:0022414 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030154 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032989 GO:0034220 GO:0040007 GO:0042391 GO:0042592 GO:0044425 GO:0044459 GO:0044464 GO:0044706 GO:0045177 GO:0046873 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051704 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055085 GO:0060560 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0071804 GO:0071805 GO:0071840 GO:0071944 GO:0072503 GO:0072507 GO:0072511 GO:0098590 GO:0098655 GO:0098660 GO:0098662 GO:0098771

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

706

Amino Acids

80.91

Weight (kDa)

6.79

Isoelectric Point (pI)

44.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	50 - 377	1.5e-18	Ion transport protein
cNMP_binding	PF00027	473 - 562	2.6e-10	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0016495)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14870
fragaria_vesca	FvH4_6g50510
malus_domestica	MD09G1035800.v1.1 MD17G1037400.v1.1
prunus_persica	Prupe.3G282200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0170931
rosa_laevigata	RLG00000021993
rosa_multiflora	Rmu_sc0025148.1_g000002
rosa_roxburghii	Rroxscaffold_2G00080970
rosa_rugosa	Rorug02G0552400
rosa_samantha	Rh2BG636000 Rh2CG604500 Rh2DG647600
rosa_wichuraiana	Rw2G051780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1802
AccB1I	GGYRCC	2 cut(s)	111, 156
AccB7I	CCANNNNNTGG	1 cut(s)	124
AccBSI	CCGCTC	2 cut(s)	97, 288
AccI	GTMKAC	1 cut(s)	7
AccII	CGCG	3 cut(s)	71, 188, 375
AclI	AACGTT	1 cut(s)	840
AclWI	GGATC	3 cut(s)	481, 2030, 2042
AcoI	YGGCCR	4 cut(s)	72, 370, 621, 1864
AcsI	RAATTY	2 cut(s)	502, 1997
AcuI	CTGAAG	1 cut(s)	1662
AcyI	GRCGYC	2 cut(s)	112, 237
AfaI	GTAC	3 cut(s)	956, 1624, 1739
AfiI	CCNNNNNNNGG	4 cut(s)	124, 360, 717, 1506
AflII	CTTAAG	1 cut(s)	1676
AflIII	ACRYGT	1 cut(s)	1210
AgsI	TTSAA	9 cut(s)	589, 919, 1012, 1136, 1436, 1525, 1649, 1699, 2058
AhlI	ACTAGT	1 cut(s)	2060
AjnI	CCWGG	5 cut(s)	632, 792, 1543, 1861, 1917
Alw21I	GWGCWC	3 cut(s)	93, 1022, 1493
Alw26I	GTCTC	3 cut(s)	1028, 1400, 1405
AlwI	GGATC	3 cut(s)	481, 2030, 2042
AlwNI	CAGNNNCTG	1 cut(s)	124
AoxI	GGCC	7 cut(s)	72, 370, 534, 621, 834, 1864, 1977
ApeKI	GCWGC	3 cut(s)	446, 1784, 2003
ApoI	RAATTY	2 cut(s)	502, 1997
ArsI	GACNNNNNNTTYG	2 cut(s)	1664, 1696
Asp700I	GAANNNNTTC	1 cut(s)	1212
AspA2I	CCTAGG	1 cut(s)	1537
AspLEI	GCGC	4 cut(s)	114, 190, 512, 1660
AspS9I	GGNCC	7 cut(s)	127, 391, 535, 834, 1541, 1672, 1977
AsuC2I	CCSGG	1 cut(s)	131
AvaII	GGWCC	4 cut(s)	127, 391, 1541, 1672
AvrII	CCTAGG	1 cut(s)	1537
BalI	TGGCCA	2 cut(s)	623, 1866
BanI	GGYRCC	2 cut(s)	111, 156
BanII	GRGCYC	2 cut(s)	1493, 1636
BauI	CACGAG	1 cut(s)	1248
BbsI	GAAGAC	3 cut(s)	611, 1019, 1697
Bbv12I	GWGCWC	3 cut(s)	93, 1022, 1493
BbvCI	CCTCAGC	1 cut(s)	1668
BbvI	GCAGC	3 cut(s)	433, 1771, 1990
BccI	CCATC	4 cut(s)	1538, 1807, 1919, 1967
BceAI	ACGGC	3 cut(s)	62, 392, 1323
BcgI	CGANNNNNNTGC	4 cut(s)	1009, 1043, 2057, 2091
BciT130I	CCWGG	5 cut(s)	634, 794, 1545, 1863, 1919
BciVI	GTATCC	1 cut(s)	157
BcnI	CCSGG	1 cut(s)	131
BcoDI	GTCTC	3 cut(s)	1028, 1400, 1405
BcuI	ACTAGT	1 cut(s)	2060
BfaI	CTAG	6 cut(s)	360, 564, 671, 1538, 1596, 2061
BfmI	CTRYAG	3 cut(s)	41, 1721, 2109
BfoI	RGCGCY	1 cut(s)	115
BfrI	CTTAAG	1 cut(s)	1676
BfuI	GTATCC	1 cut(s)	157
BlnI	CCTAGG	1 cut(s)	1537
BlpI	GCTNAGC	1 cut(s)	2037
BmcAI	AGTACT	1 cut(s)	956
Bme1390I	CCNGG	6 cut(s)	131, 634, 794, 1545, 1863, 1919
Bme18I	GGWCC	4 cut(s)	127, 391, 1541, 1672
BmgT120I	GGNCC	7 cut(s)	127, 391, 535, 834, 1541, 1672, 1977
BmiI	GGNNCC	6 cut(s)	113, 129, 158, 393, 643, 1978
BmrFI	CCNGG	6 cut(s)	131, 634, 794, 1545, 1863, 1919
BmrI	ACTGGG	1 cut(s)	1442
BmsI	GCATC	7 cut(s)	1189, 1324, 1369, 1449, 1575, 1978, 2061
BmuI	ACTGGG	1 cut(s)	1442
BpiI	GAAGAC	3 cut(s)	611, 1019, 1697
Bpu10I	CCTNAGC	1 cut(s)	1668
Bpu1102I	GCTNAGC	1 cut(s)	2037
BpuEI	CTTGAG	2 cut(s)	404, 1505
BpuMI	CCSGG	1 cut(s)	131
Bsa29I	ATCGAT	1 cut(s)	885
BsaBI	GATNNNNATC	2 cut(s)	473, 899
BsaHI	GRCGYC	2 cut(s)	112, 237
BsaJI	CCNNGG	5 cut(s)	69, 373, 633, 1537, 2075
BsaXI	ACNNNNNCTCC	4 cut(s)	119, 149, 248, 278
Bsc4I	CCNNNNNNNGG	4 cut(s)	124, 360, 717, 1506
Bse118I	RCCGGY	1 cut(s)	22
Bse1I	ACTGG	6 cut(s)	616, 675, 727, 1186, 1448, 1519
Bse3DI	GCAATG	1 cut(s)	939
Bse8I	GATNNNNATC	2 cut(s)	473, 899
BseBI	CCWGG	5 cut(s)	634, 794, 1545, 1863, 1919
BseCI	ATCGAT	1 cut(s)	885
BseDI	CCNNGG	5 cut(s)	69, 373, 633, 1537, 2075
BseGI	GGATG	7 cut(s)	282, 877, 1171, 1179, 1369, 1403, 1930
BseJI	GATNNNNATC	2 cut(s)	473, 899
BseLI	CCNNNNNNNGG	4 cut(s)	124, 360, 717, 1506
BseMI	GCAATG	1 cut(s)	939
BseMII	CTCAG	2 cut(s)	1659, 2051
BseNI	ACTGG	6 cut(s)	616, 675, 727, 1186, 1448, 1519
BseRI	GAGGAG	1 cut(s)	1266
BseX3I	CGGCCG	2 cut(s)	72, 370
BseXI	GCAGC	3 cut(s)	433, 1771, 1990
BseYI	CCCAGC	1 cut(s)	353
Bsh1236I	CGCG	3 cut(s)	71, 188, 375
Bsh1285I	CGRYCG	2 cut(s)	75, 373
BshFI	GGCC	7 cut(s)	74, 372, 536, 623, 836, 1866, 1979
BshNI	GGYRCC	2 cut(s)	111, 156
BshVI	ATCGAT	1 cut(s)	885
BsiEI	CGRYCG	2 cut(s)	75, 373
BsiHKAI	GWGCWC	3 cut(s)	93, 1022, 1493
BsiSI	CCGG	2 cut(s)	23, 131
BslFI	GGGAC	2 cut(s)	923, 1328
BslI	CCNNNNNNNGG	4 cut(s)	124, 360, 717, 1506
BsmAI	GTCTC	3 cut(s)	1028, 1400, 1405
BsmBI	CGTCTC	2 cut(s)	1400, 1405
BsmFI	GGGAC	2 cut(s)	923, 1328
BsnI	GGCC	7 cut(s)	74, 372, 536, 623, 836, 1866, 1979
Bsp1286I	GDGCHC	4 cut(s)	93, 1022, 1493, 1636
Bsp143I	GATC	8 cut(s)	379, 402, 439, 486, 514, 882, 2022, 2047
Bsp1720I	GCTNAGC	1 cut(s)	2037
BspANI	GGCC	7 cut(s)	74, 372, 536, 623, 836, 1866, 1979
BspCNI	CTCAG	2 cut(s)	1660, 2050
BspDI	ATCGAT	1 cut(s)	885
BspFNI	CGCG	3 cut(s)	71, 188, 375
BspLI	GGNNCC	6 cut(s)	113, 129, 158, 393, 643, 1978
BspPI	GGATC	3 cut(s)	481, 2030, 2042
BspQI	GCTCTTC	2 cut(s)	81, 197
BspT107I	GGYRCC	2 cut(s)	111, 156
BspTI	CTTAAG	1 cut(s)	1676
BsrBI	CCGCTC	2 cut(s)	97, 288
BsrDI	GCAATG	1 cut(s)	939
BsrFI	RCCGGY	1 cut(s)	22
BsrI	ACTGG	6 cut(s)	616, 675, 727, 1186, 1448, 1519
BssAI	RCCGGY	1 cut(s)	22
BssECI	CCNNGG	5 cut(s)	69, 373, 633, 1537, 2075
BssMI	GATC	8 cut(s)	379, 402, 439, 486, 514, 882, 2022, 2047
BssNI	GRCGYC	2 cut(s)	112, 237
BssSI	CACGAG	1 cut(s)	1248
BssT1I	CCWWGG	1 cut(s)	1537
Bst2BI	CACGAG	1 cut(s)	1248
Bst2UI	CCWGG	5 cut(s)	634, 794, 1545, 1863, 1919
Bst4CI	ACNGT	3 cut(s)	570, 863, 1627
Bst6I	CTCTTC	9 cut(s)	81, 197, 308, 317, 459, 756, 873, 1869, 2011
BstACI	GRCGYC	2 cut(s)	112, 237
BstAFI	CTTAAG	1 cut(s)	1676
BstAPI	GCANNNNNTGC	1 cut(s)	518
BstC8I	GCNNGC	4 cut(s)	241, 1728, 1771, 1857
BstDEI	CTNAG	2 cut(s)	1668, 2037
BstDSI	CCRYGG	2 cut(s)	69, 373
BstEII	GGTNACC	1 cut(s)	1442
BstF5I	GGATG	7 cut(s)	282, 877, 1171, 1179, 1369, 1403, 1930
BstFNI	CGCG	3 cut(s)	71, 188, 375
BstH2I	RGCGCY	1 cut(s)	115
BstHHI	GCGC	4 cut(s)	114, 190, 512, 1660
BstKTI	GATC	8 cut(s)	382, 405, 442, 489, 517, 885, 2025, 2050
BstMAI	GTCTC	3 cut(s)	1028, 1400, 1405
BstMBI	GATC	8 cut(s)	379, 402, 439, 486, 514, 882, 2022, 2047
BstMCI	CGRYCG	2 cut(s)	75, 373
BstMWI	GCNNNNNNNGC	8 cut(s)	71, 240, 347, 518, 629, 644, 1664, 2095
BstNI	CCWGG	5 cut(s)	634, 794, 1545, 1863, 1919
BstNSI	RCATGY	5 cut(s)	322, 1102, 1609, 1730, 1859
BstPI	GGTNACC	1 cut(s)	1442
BstSCI	CCNGG	6 cut(s)	129, 632, 792, 1543, 1861, 1917
BstSFI	CTRYAG	3 cut(s)	41, 1721, 2109
BstUI	CGCG	3 cut(s)	71, 188, 375
BstV1I	GCAGC	3 cut(s)	433, 1771, 1990
BstV2I	GAAGAC	3 cut(s)	611, 1019, 1697
BstXI	CCANNNNNNTGG	3 cut(s)	1925, 1973, 1987
BstZI	CGGCCG	2 cut(s)	72, 370
Bsu15I	ATCGAT	1 cut(s)	885
BsuI	GTATCC	1 cut(s)	157
BsuRI	GGCC	7 cut(s)	74, 372, 536, 623, 836, 1866, 1979
BsuTUI	ATCGAT	1 cut(s)	885
BtgI	CCRYGG	2 cut(s)	69, 373
BtgZI	GCGATG	2 cut(s)	331, 1166
BtsCI	GGATG	7 cut(s)	282, 877, 1171, 1179, 1369, 1403, 1930
BtsIMutI	CAGTG	2 cut(s)	734, 1638
Cac8I	GCNNGC	4 cut(s)	241, 1728, 1771, 1857
CaiI	CAGNNNCTG	1 cut(s)	124
CciNI	GCGGCCGC	1 cut(s)	72
CfoI	GCGC	4 cut(s)	114, 190, 512, 1660
Cfr10I	RCCGGY	1 cut(s)	22
Cfr13I	GGNCC	7 cut(s)	127, 391, 535, 834, 1541, 1672, 1977
Cfr42I	CCGCGG	2 cut(s)	72, 376
ClaI	ATCGAT	1 cut(s)	885
CseI	GACGC	3 cut(s)	245, 920, 1382
CsiI	ACCWGGT	1 cut(s)	1543
Csp6I	GTAC	3 cut(s)	955, 1623, 1738
CviQI	GTAC	3 cut(s)	955, 1623, 1738
DdeI	CTNAG	2 cut(s)	1668, 2037
DinI	GGCGCC	1 cut(s)	113
DpnI	GATC	8 cut(s)	381, 404, 441, 488, 516, 884, 2024, 2049
DpnII	GATC	8 cut(s)	379, 402, 439, 486, 514, 882, 2022, 2047
DraI	TTTAAA	2 cut(s)	981, 1914
EaeI	YGGCCR	4 cut(s)	72, 370, 621, 1864
EagI	CGGCCG	2 cut(s)	72, 370
Eam1104I	CTCTTC	9 cut(s)	81, 197, 308, 317, 459, 756, 873, 1869, 2011
EarI	CTCTTC	9 cut(s)	81, 197, 308, 317, 459, 756, 873, 1869, 2011
EciI	GGCGGA	1 cut(s)	23
Ecl136II	GAGCTC	1 cut(s)	1491
EclXI	CGGCCG	2 cut(s)	72, 370
Eco130I	CCWWGG	1 cut(s)	1537
Eco24I	GRGCYC	2 cut(s)	1493, 1636
Eco47I	GGWCC	4 cut(s)	127, 391, 1541, 1672
Eco52I	CGGCCG	2 cut(s)	72, 370
Eco53kI	GAGCTC	1 cut(s)	1491
Eco57I	CTGAAG	1 cut(s)	1662
Eco91I	GGTNACC	1 cut(s)	1442
EcoICRI	GAGCTC	1 cut(s)	1491
EcoO109I	RGGNCCY	1 cut(s)	1672
EcoO65I	GGTNACC	1 cut(s)	1442
EcoRII	CCWGG	5 cut(s)	632, 792, 1543, 1861, 1917
EcoT14I	CCWWGG	1 cut(s)	1537
EcoT22I	ATGCAT	1 cut(s)	1857
EcoT38I	GRGCYC	2 cut(s)	1493, 1636
EgeI	GGCGCC	1 cut(s)	113
EheI	GGCGCC	1 cut(s)	113
ErhI	CCWWGG	1 cut(s)	1537
Esp3I	CGTCTC	2 cut(s)	1400, 1405
FalI	AAGNNNNNCTT	4 cut(s)	413, 445, 1893, 1925
FaqI	GGGAC	2 cut(s)	923, 1328
FauI	CCCGC	3 cut(s)	102, 499, 631
FauNDI	CATATG	1 cut(s)	1385
FblI	GTMKAC	1 cut(s)	7
FokI	GGATG	7 cut(s)	269, 884, 1178, 1186, 1376, 1390, 1937
FriOI	GRGCYC	2 cut(s)	1493, 1636
FspBI	CTAG	6 cut(s)	360, 564, 671, 1538, 1596, 2061
GlaI	GCGC	4 cut(s)	113, 189, 511, 1659
GsaI	CCCAGC	1 cut(s)	357
HaeII	RGCGCY	1 cut(s)	115
HaeIII	GGCC	7 cut(s)	74, 372, 536, 623, 836, 1866, 1979
HapII	CCGG	2 cut(s)	23, 131
HgaI	GACGC	3 cut(s)	245, 920, 1382
HhaI	GCGC	4 cut(s)	114, 190, 512, 1660
Hin1I	GRCGYC	2 cut(s)	112, 237
Hin6I	GCGC	4 cut(s)	112, 188, 510, 1658
HinP1I	GCGC	4 cut(s)	112, 188, 510, 1658
HincII	GTYRAC	2 cut(s)	1291, 1956
HindII	GTYRAC	2 cut(s)	1291, 1956
HindIII	AAGCTT	1 cut(s)	1650
HinfI	GANTC	9 cut(s)	121, 134, 589, 789, 900, 1139, 1265, 1618, 2054
HpaI	GTTAAC	1 cut(s)	1956
HpaII	CCGG	2 cut(s)	23, 131
Hpy166II	GTNNAC	3 cut(s)	8, 1291, 1956
Hpy188I	TCNGA	2 cut(s)	427, 594
Hpy188III	TCNNGA	5 cut(s)	125, 919, 1376, 1436, 2051
Hpy8I	GTNNAC	3 cut(s)	8, 1291, 1956
Hpy99I	CGWCG	7 cut(s)	62, 230, 239, 272, 275, 1221, 1895
HpyAV	CCTTC	8 cut(s)	224, 232, 289, 301, 352, 1433, 1620, 1788
HpyCH4III	ACNGT	3 cut(s)	570, 863, 1627
HpyCH4IV	ACGT	3 cut(s)	840, 1210, 1702
HpyF10VI	GCNNNNNNNGC	8 cut(s)	71, 240, 347, 518, 629, 644, 1664, 2095
HpyF3I	CTNAG	2 cut(s)	1668, 2037
HpySE526I	ACGT	3 cut(s)	840, 1210, 1702
Hsp92I	GRCGYC	2 cut(s)	112, 237
HspAI	GCGC	4 cut(s)	112, 188, 510, 1658
KasI	GGCGCC	1 cut(s)	111
KspAI	GTTAAC	1 cut(s)	1956
KspI	CCGCGG	2 cut(s)	72, 376
Kzo9I	GATC	8 cut(s)	379, 402, 439, 486, 514, 882, 2022, 2047
LguI	GCTCTTC	2 cut(s)	81, 197
LmnI	GCTCC	6 cut(s)	102, 293, 641, 689, 811, 1496
Lsp1109I	GCAGC	3 cut(s)	433, 1771, 1990
LweI	GCATC	7 cut(s)	1189, 1324, 1369, 1449, 1575, 1978, 2061
MabI	ACCWGGT	1 cut(s)	1543
MaeI	CTAG	6 cut(s)	360, 564, 671, 1538, 1596, 2061
MaeII	ACGT	3 cut(s)	840, 1210, 1702
MaeIII	GTNAC	7 cut(s)	274, 841, 1188, 1281, 1442, 1547, 1880
MalI	GATC	8 cut(s)	381, 404, 441, 488, 516, 884, 2024, 2049
MbiI	CCGCTC	2 cut(s)	97, 288
MboI	GATC	8 cut(s)	379, 402, 439, 486, 514, 882, 2022, 2047
MhlI	GDGCHC	4 cut(s)	93, 1022, 1493, 1636
MlsI	TGGCCA	2 cut(s)	623, 1866
MluCI	AATT	7 cut(s)	502, 597, 652, 722, 852, 865, 1997
MluNI	TGGCCA	2 cut(s)	623, 1866
Mly113I	GGCGCC	1 cut(s)	112
MlyI	GAGTC	2 cut(s)	128, 1612
MmeI	TCCRAC	4 cut(s)	162, 450, 667, 713
Mox20I	TGGCCA	2 cut(s)	623, 1866
Mph1103I	ATGCAT	1 cut(s)	1857
MroXI	GAANNNNTTC	1 cut(s)	1212
MscI	TGGCCA	2 cut(s)	623, 1866
Msp20I	TGGCCA	2 cut(s)	623, 1866
MspA1I	CMGCKG	4 cut(s)	71, 375, 1312, 2041
MspCI	CTTAAG	1 cut(s)	1676
MspI	CCGG	2 cut(s)	23, 131
MspR9I	CCNGG	6 cut(s)	131, 634, 794, 1545, 1863, 1919
MssI	GTTTAAAC	1 cut(s)	981
MvaI	CCWGG	5 cut(s)	634, 794, 1545, 1863, 1919
MvnI	CGCG	3 cut(s)	71, 188, 375
MwoI	GCNNNNNNNGC	8 cut(s)	71, 240, 347, 518, 629, 644, 1664, 2095
NarI	GGCGCC	1 cut(s)	112
NciI	CCSGG	1 cut(s)	131
NdeI	CATATG	1 cut(s)	1385
NdeII	GATC	8 cut(s)	379, 402, 439, 486, 514, 882, 2022, 2047
NlaIV	GGNNCC	6 cut(s)	113, 129, 158, 393, 643, 1978
NmeAIII	GCCGAG	1 cut(s)	1008
NmuCI	GTSAC	3 cut(s)	274, 1442, 1547
NotI	GCGGCCGC	1 cut(s)	72
NsiI	ATGCAT	1 cut(s)	1857
NspI	RCATGY	5 cut(s)	322, 1102, 1609, 1730, 1859
PaeI	GCATGC	2 cut(s)	1730, 1859
PciSI	GCTCTTC	2 cut(s)	81, 197
PcsI	WCGNNNNNNNCGW	4 cut(s)	231, 375, 882, 1216
PdmI	GAANNNNTTC	1 cut(s)	1212
PfeI	GAWTC	7 cut(s)	121, 589, 789, 900, 1139, 1265, 2054
PflMI	CCANNNNNTGG	1 cut(s)	124
PfoI	TCCNGGA	1 cut(s)	792
PleI	GAGTC	2 cut(s)	128, 1612
PluTI	GGCGCC	1 cut(s)	115
PmeI	GTTTAAAC	1 cut(s)	981
PpsI	GAGTC	2 cut(s)	128, 1612
PpuMI	RGGWCCY	1 cut(s)	1672
PsiI	TTATAA	1 cut(s)	1802
Psp124BI	GAGCTC	1 cut(s)	1493
Psp1406I	AACGTT	1 cut(s)	840
Psp5II	RGGWCCY	1 cut(s)	1672
Psp6I	CCWGG	5 cut(s)	632, 792, 1543, 1861, 1917
PspEI	GGTNACC	1 cut(s)	1442
PspFI	CCCAGC	1 cut(s)	353
PspGI	CCWGG	5 cut(s)	632, 792, 1543, 1861, 1917
PspN4I	GGNNCC	6 cut(s)	113, 129, 158, 393, 643, 1978
PspPI	GGNCC	7 cut(s)	127, 391, 535, 834, 1541, 1672, 1977
PspPPI	RGGWCCY	1 cut(s)	1672
PstNI	CAGNNNCTG	1 cut(s)	124
PvuII	CAGCTG	1 cut(s)	2041
RsaI	GTAC	3 cut(s)	956, 1624, 1739
RsaNI	GTAC	3 cut(s)	955, 1623, 1738
SacI	GAGCTC	1 cut(s)	1493
SacII	CCGCGG	2 cut(s)	72, 376
SapI	GCTCTTC	2 cut(s)	81, 197
Sau3AI	GATC	8 cut(s)	379, 402, 439, 486, 514, 882, 2022, 2047
Sau96I	GGNCC	7 cut(s)	127, 391, 535, 834, 1541, 1672, 1977
ScaI	AGTACT	1 cut(s)	956
SchI	GAGTC	2 cut(s)	128, 1612
ScrFI	CCNGG	6 cut(s)	131, 634, 794, 1545, 1863, 1919
SduI	GDGCHC	4 cut(s)	93, 1022, 1493, 1636
SexAI	ACCWGGT	1 cut(s)	1543
SfaNI	GCATC	7 cut(s)	1189, 1324, 1369, 1449, 1575, 1978, 2061
SfcI	CTRYAG	3 cut(s)	41, 1721, 2109
SfoI	GGCGCC	1 cut(s)	113
Sfr303I	CCGCGG	2 cut(s)	72, 376
SgrBI	CCGCGG	2 cut(s)	72, 376
SinI	GGWCC	4 cut(s)	127, 391, 1541, 1672
SmlI	CTYRAG	3 cut(s)	419, 1484, 1676
SmoI	CTYRAG	3 cut(s)	419, 1484, 1676
SpeI	ACTAGT	1 cut(s)	2060
SphI	GCATGC	2 cut(s)	1730, 1859
Sse9I	AATT	7 cut(s)	502, 597, 652, 722, 852, 865, 1997
SspDI	GGCGCC	1 cut(s)	111
SspI	AATATT	1 cut(s)	830
SspMI	CTAG	6 cut(s)	360, 564, 671, 1538, 1596, 2061
SstI	GAGCTC	1 cut(s)	1493
StyD4I	CCNGG	6 cut(s)	129, 632, 792, 1543, 1861, 1917
StyI	CCWWGG	1 cut(s)	1537
TaaI	ACNGT	3 cut(s)	570, 863, 1627
TaiI	ACGT	3 cut(s)	843, 1213, 1705
TaqI	TCGA	8 cut(s)	198, 228, 885, 1142, 1219, 1616, 1663, 1940
TasI	AATT	7 cut(s)	502, 597, 652, 722, 852, 865, 1997
TatI	WGTACW	1 cut(s)	954
TauI	GCSGC	9 cut(s)	57, 74, 77, 375, 378, 647, 721, 932, 1315
TfiI	GAWTC	7 cut(s)	121, 589, 789, 900, 1139, 1265, 2054
TscAI	CASTG	2 cut(s)	734, 1645
TseFI	GTSAC	3 cut(s)	274, 1442, 1547
TseI	GCWGC	3 cut(s)	446, 1784, 2003
Tsp45I	GTSAC	3 cut(s)	274, 1442, 1547
TspDTI	ATGAA	8 cut(s)	184, 271, 334, 421, 1275, 1317, 1765, 1926
TspGWI	ACGGA	4 cut(s)	139, 256, 1014, 1178
TspRI	CASTG	2 cut(s)	734, 1645
Van91I	CCANNNNNTGG	1 cut(s)	124
Vha464I	CTTAAG	1 cut(s)	1676
VpaK11BI	GGWCC	4 cut(s)	127, 391, 1541, 1672
XapI	RAATTY	2 cut(s)	502, 1997
XceI	RCATGY	5 cut(s)	322, 1102, 1609, 1730, 1859
XcmI	CCANNNNNNNNNTGG	1 cut(s)	529
XmaJI	CCTAGG	1 cut(s)	1537
XmiI	GTMKAC	1 cut(s)	7
XmnI	GAANNNNTTC	1 cut(s)	1212
XspI	CTAG	6 cut(s)	360, 564, 671, 1538, 1596, 2061
ZrmI	AGTACT	1 cut(s)	956
Zsp2I	ATGCAT	1 cut(s)	1857

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.