Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0016495

Physical Location & Seq

Genomic Coordinates Forward (+)

79796700 .. 79799934

Gene Structure 3235 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021993

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1911 bp

ATGAGTAGACCAATCACCACGCCGGTCAAATTCCGCCCTCTCCAGAACCCTAGCGGCGACGGCGCCACCTCGGCCGCCGTAGTAGACGAGCACTCGCTCCACATTCTATGGCGCCACAAGATTCTCGACCCCGACTCCGACCTGGTATCCCTCTGGCACCACATCTTCCTCGTCATCTGCATCGCCGCCCTCTTCATCGACCCTCTCTACTTCTACCTCCCCTTCGTCGGCGGCGAGGGCTGCCTCTCCACCGACAGCCGCCTCGCCGTCATCGTCACCTTCTTCCGCTCCATCGCCGACCTCTTCTACCTCTTCCACATGATCGTCAAGTTCCGCACCGCATTCATCGCCCCCAGCTCTAGGGTTTTCGGCCGCGGCGATCTCGTCATGGACGGCAGACAGATCGCCATGCGGTATCTCAAGTCCGACTTCGTCGTCGATCTGGCTGCCACTCTTCCAATTCCGCAGATATTTGGAGCCGTTTGGTATCTATGTGCCATAGGGCGGCAATTTGAATGTTGGAAAACGGAGTGTAGTGAAGAGAATACAAAAGTTGTGACTTGCCTCTATAGTTTCCTGGATTGCAAGAGTTTGGACCTACCAGAACGGGAATCTTGGGCAAACGCCACCAAAGTAATAAAAAAGTGTGATGCCTCTGATGAAGAGGCTGATTTTAAGTTTGGAATCTTTGACAAAGCATTTAAGACTGAGGCTGCAAAGACGAACTTTTTTGAGAAGTACTTGTTTTGTTTCTGGTGGGGTTTAAGAAACTTATGCTCATACGGGCAGACTTTGATGACGAGCACATATCTTGGCGAGACATTGTTTTCCATTGTCTTGTGCATTTCTGGTTTGATTTTGTTCTCACTATTGATTGGCAACATGCAGACTTATCTGCAATCAATGTCAATAAAAATCGAAGAATGGAGGATTAAGCAAAGAGATACTGATGAGTGGATGAGGCATCGCCAGTTACCTGAACCCTTGCAAGAACGTGTTCGTAGATTTATGCAATACAAATGGTTTGCAACACGAGGAGTTGATGAAGAATCCATCTTGCATTCATTACCCATCGACCTCTGCCATGAAATCCAGCAGCACTTATGCCTTTCCCTTGTTCGTCGTGTCCCTTTTTTCTCACAAATGGATGACCAGCTTCTTGATGCCATATGTGAGCGTCTTGTGTCATCCTTGACTATCAAAGGCACATATATAGTTCAAGAAGGCGACCCAGTAAATGAGATGCTGTTTATTATCAGAGGGAAACTTGAGAGCTCCACAACCAATGGAGGGAGGACTGGCTTCTTTAACTCCATCAATCTAGGACCTGGTGACTTCTGTGGTGAGGAACTATTGACATGGGCATTGATGCCAAGCTCTAGCGTTAGCATGCCTTCTTCCACTCGGACTGTGAGAGCCCTCACTGAAGTTGAAGCTTTTGCGCTTCGAGCTGAGGACCTTAAGTTTGTTGCAAGTCAGTTCAAACGCCTTCACAGCAAGAAACTACAGCATGCCTTTAGGTACTACTCTCACCAATGGAGGACATGGGGTGCTTGCTTCATACAAGCTGCTTGGAGAAGGTTTAAGAAGAGGAAGATGGCAAGGGACTTGGCTATGCAGGAGGGCTTATACTATTTGCACGTACCTGGCCAAGAGGAAGAGGGTTACTACTACGACAACGAAGAACAAACAGATCTTGGAAACTATGACGGTGAGAGTGGTGATAGGTCATCGACAGGGGAGAAGTTAAGCAATTCCATGAATCTTGGGGCCACATTTCTGGCTTCTAAATTTGCTGCAAATACAAGAAGAGGGATTGTGCAGAAAGCTCAGCTGGTTGATCCTGATTCAACTAGTTTGCAGATGCCTCGGATGTTTAAGCCAGATGAGCCTGATTTTTCTGTAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005262 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0008150 GO:0008324 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015085 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0016043 GO:0016049 GO:0016324 GO:0019725 GO:0022414 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030154 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032989 GO:0034220 GO:0040007 GO:0042391 GO:0042592 GO:0044425 GO:0044459 GO:0044464 GO:0044706 GO:0045177 GO:0046873 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051704 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055085 GO:0060560 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0071804 GO:0071805 GO:0071840 GO:0071944 GO:0072503 GO:0072507 GO:0072511 GO:0098590 GO:0098655 GO:0098660 GO:0098662 GO:0098771

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

637

Amino Acids

72.99

Weight (kDa)

6.21

Isoelectric Point (pI)

44.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	231 - 302	1.8e-06	Ion transport protein
cNMP_binding	PF00027	401 - 490	1.1e-09	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0016495)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14870
fragaria_vesca	FvH4_6g50510
malus_domestica	MD09G1035800.v1.1 MD17G1037400.v1.1
prunus_persica	Prupe.3G282200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0170931
rosa_laevigata	RLG00000021993
rosa_multiflora	Rmu_sc0025148.1_g000002
rosa_roxburghii	Rroxscaffold_2G00080970
rosa_rugosa	Rorug02G0552400
rosa_samantha	Rh2BG636000 Rh2CG604500 Rh2DG647600
rosa_wichuraiana	Rw2G051780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	434
AccB1I	GGYRCC	3 cut(s)	62, 111, 156
AccBSI	CCGCTC	1 cut(s)	288
AccI	GTMKAC	2 cut(s)	7, 84
AccII	CGCG	1 cut(s)	375
AclWI	GGATC	1 cut(s)	1835
AcoI	YGGCCR	3 cut(s)	72, 370, 1648
AcsI	RAATTY	2 cut(s)	29, 1790
AcuI	CTGAAG	1 cut(s)	1446
AcyI	GRCGYC	2 cut(s)	63, 112
AfaI	GTAC	3 cut(s)	740, 1523, 1644
AfiI	CCNNNNNNNGG	4 cut(s)	227, 360, 504, 1290
AflII	CTTAAG	1 cut(s)	1460
AflIII	ACRYGT	1 cut(s)	994
AgsI	TTSAA	5 cut(s)	515, 1220, 1433, 1483, 1851
AhlI	ACTAGT	1 cut(s)	1853
AjnI	CCWGG	4 cut(s)	141, 576, 1327, 1645
AluBI	AGCT	9 cut(s)	357, 1156, 1275, 1377, 1436, 1451, 1568, 1829, 1834
AluI	AGCT	9 cut(s)	357, 1156, 1275, 1377, 1436, 1451, 1568, 1829, 1834
Alw21I	GWGCWC	3 cut(s)	93, 806, 1277
Alw26I	GTCTC	1 cut(s)	812
AlwI	GGATC	1 cut(s)	1835
AoxI	GGCC	4 cut(s)	72, 370, 1648, 1770
ApeKI	GCWGC	6 cut(s)	240, 446, 713, 1096, 1568, 1796
ApoI	RAATTY	2 cut(s)	29, 1790
ArsI	GACNNNNNNTTYG	2 cut(s)	1448, 1480
Asp700I	GAANNNNTTC	1 cut(s)	996
AspLEI	GCGC	3 cut(s)	65, 114, 1444
AspS9I	GGNCC	4 cut(s)	595, 1325, 1456, 1770
AsuHPI	GGTGA	7 cut(s)	7, 268, 1343, 1355, 1523, 1724, 1733
AvaII	GGWCC	3 cut(s)	595, 1325, 1456
BalI	TGGCCA	1 cut(s)	1650
BanI	GGYRCC	3 cut(s)	62, 111, 156
BanII	GRGCYC	2 cut(s)	1277, 1420
BauI	CACGAG	1 cut(s)	1032
Bbv12I	GWGCWC	3 cut(s)	93, 806, 1277
BbvCI	CCTCAGC	1 cut(s)	1452
BbvI	GCAGC	6 cut(s)	227, 433, 700, 1108, 1555, 1783
BccI	CCATC	5 cut(s)	299, 1061, 1079, 1322, 1591
BceAI	ACGGC	5 cut(s)	62, 76, 251, 409, 464
BcgI	CGANNNNNNTGC	6 cut(s)	385, 419, 428, 462, 1850, 1884
BciT130I	CCWGG	4 cut(s)	143, 578, 1329, 1647
BciVI	GTATCC	1 cut(s)	157
BcoDI	GTCTC	1 cut(s)	812
BcuI	ACTAGT	1 cut(s)	1853
BfaI	CTAG	5 cut(s)	51, 360, 1322, 1380, 1854
BfmI	CTRYAG	3 cut(s)	568, 1505, 1902
BfoI	RGCGCY	2 cut(s)	66, 115
BfrI	CTTAAG	1 cut(s)	1460
BfuI	GTATCC	1 cut(s)	157
BglI	GCCNNNNNGGC	1 cut(s)	71
BglII	AGATCT	1 cut(s)	1693
BlpI	GCTNAGC	1 cut(s)	1830
BmcAI	AGTACT	1 cut(s)	740
Bme1390I	CCNGG	4 cut(s)	143, 578, 1329, 1647
Bme18I	GGWCC	3 cut(s)	595, 1325, 1456
BmgT120I	GGNCC	4 cut(s)	595, 1325, 1456, 1770
BmiI	GGNNCC	5 cut(s)	64, 113, 158, 478, 1771
BmrFI	CCNGG	4 cut(s)	143, 578, 1329, 1647
BmrI	ACTGGG	1 cut(s)	1226
BmsI	GCATC	7 cut(s)	189, 640, 973, 1153, 1233, 1359, 1854
BmuI	ACTGGG	1 cut(s)	1226
BpmI	CTGGAG	1 cut(s)	26
Bpu10I	CCTNAGC	1 cut(s)	1452
Bpu1102I	GCTNAGC	1 cut(s)	1830
BpuEI	CTTGAG	2 cut(s)	404, 1289
BsaAI	YACGTR	1 cut(s)	1642
BsaHI	GRCGYC	2 cut(s)	63, 112
BsaJI	CCNNGG	3 cut(s)	69, 373, 1868
BsaXI	ACNNNNNCTCC	2 cut(s)	119, 149
Bsc4I	CCNNNNNNNGG	4 cut(s)	227, 360, 504, 1290
Bse118I	RCCGGY	1 cut(s)	22
Bse1I	ACTGG	3 cut(s)	970, 1232, 1303
BseBI	CCWGG	4 cut(s)	143, 578, 1329, 1647
BseDI	CCNNGG	3 cut(s)	69, 373, 1868
BseGI	GGATG	4 cut(s)	963, 1153, 1187, 1878
BseLI	CCNNNNNNNGG	4 cut(s)	227, 360, 504, 1290
BseMII	CTCAG	3 cut(s)	699, 1443, 1844
BseNI	ACTGG	3 cut(s)	970, 1232, 1303
BseRI	GAGGAG	1 cut(s)	1050
BseX3I	CGGCCG	2 cut(s)	72, 370
BseXI	GCAGC	6 cut(s)	227, 433, 700, 1108, 1555, 1783
BseYI	CCCAGC	1 cut(s)	353
BsgI	GTGCAG	1 cut(s)	1841
Bsh1236I	CGCG	1 cut(s)	375
Bsh1285I	CGRYCG	2 cut(s)	75, 373
BshFI	GGCC	4 cut(s)	74, 372, 1650, 1772
BshNI	GGYRCC	3 cut(s)	62, 111, 156
BsiEI	CGRYCG	2 cut(s)	75, 373
BsiHKAI	GWGCWC	3 cut(s)	93, 806, 1277
BsiSI	CCGG	1 cut(s)	23
BslFI	GGGAC	2 cut(s)	1112, 1619
BslI	CCNNNNNNNGG	4 cut(s)	227, 360, 504, 1290
BsmAI	GTCTC	1 cut(s)	812
BsmFI	GGGAC	2 cut(s)	1112, 1619
BsmI	GAATGC	2 cut(s)	341, 1060
BsnI	GGCC	4 cut(s)	74, 372, 1650, 1772
Bsp1286I	GDGCHC	4 cut(s)	93, 806, 1277, 1420
Bsp143I	GATC	6 cut(s)	321, 379, 402, 439, 1693, 1840
Bsp1720I	GCTNAGC	1 cut(s)	1830
BspANI	GGCC	4 cut(s)	74, 372, 1650, 1772
BspCNI	CTCAG	3 cut(s)	700, 1444, 1843
BspFNI	CGCG	1 cut(s)	375
BspLI	GGNNCC	5 cut(s)	64, 113, 158, 478, 1771
BspPI	GGATC	1 cut(s)	1835
BspT107I	GGYRCC	3 cut(s)	62, 111, 156
BspTI	CTTAAG	1 cut(s)	1460
BsrBI	CCGCTC	1 cut(s)	288
BsrFI	RCCGGY	1 cut(s)	22
BsrI	ACTGG	3 cut(s)	970, 1232, 1303
BssAI	RCCGGY	1 cut(s)	22
BssECI	CCNNGG	3 cut(s)	69, 373, 1868
BssMI	GATC	6 cut(s)	321, 379, 402, 439, 1693, 1840
BssNI	GRCGYC	2 cut(s)	63, 112
BssSI	CACGAG	1 cut(s)	1032
Bst2BI	CACGAG	1 cut(s)	1032
Bst2UI	CCWGG	4 cut(s)	143, 578, 1329, 1647
Bst4CI	ACNGT	2 cut(s)	1411, 1712
Bst6I	CTCTTC	9 cut(s)	197, 308, 317, 459, 534, 657, 1583, 1653, 1804
BstACI	GRCGYC	2 cut(s)	63, 112
BstAFI	CTTAAG	1 cut(s)	1460
BstBAI	YACGTR	1 cut(s)	1642
BstC8I	GCNNGC	3 cut(s)	1391, 1512, 1555
BstDEI	CTNAG	3 cut(s)	708, 1452, 1830
BstDSI	CCRYGG	1 cut(s)	373
BstF5I	GGATG	4 cut(s)	963, 1153, 1187, 1878
BstFNI	CGCG	1 cut(s)	375
BstH2I	RGCGCY	2 cut(s)	66, 115
BstHHI	GCGC	3 cut(s)	65, 114, 1444
BstKTI	GATC	6 cut(s)	324, 382, 405, 442, 1696, 1843
BstMAI	GTCTC	1 cut(s)	812
BstMBI	GATC	6 cut(s)	321, 379, 402, 439, 1693, 1840
BstMCI	CGRYCG	2 cut(s)	75, 373
BstMWI	GCNNNNNNNGC	8 cut(s)	60, 71, 237, 240, 347, 1448, 1494, 1888
BstNI	CCWGG	4 cut(s)	143, 578, 1329, 1647
BstNSI	RCATGY	3 cut(s)	886, 1393, 1514
BstSCI	CCNGG	4 cut(s)	141, 576, 1327, 1645
BstSFI	CTRYAG	3 cut(s)	568, 1505, 1902
BstUI	CGCG	1 cut(s)	375
BstV1I	GCAGC	6 cut(s)	227, 433, 700, 1108, 1555, 1783
BstX2I	RGATCY	1 cut(s)	1693
BstXI	CCANNNNNNTGG	1 cut(s)	1780
BstYI	RGATCY	1 cut(s)	1693
BstZI	CGGCCG	2 cut(s)	72, 370
BsuI	GTATCC	1 cut(s)	157
BsuRI	GGCC	4 cut(s)	74, 372, 1650, 1772
BtgI	CCRYGG	1 cut(s)	373
BtgZI	GCGATG	4 cut(s)	166, 277, 331, 950
BtsCI	GGATG	4 cut(s)	963, 1153, 1187, 1878
BtsIMutI	CAGTG	1 cut(s)	1422
Cac8I	GCNNGC	3 cut(s)	1391, 1512, 1555
CfoI	GCGC	3 cut(s)	65, 114, 1444
Cfr10I	RCCGGY	1 cut(s)	22
Cfr13I	GGNCC	4 cut(s)	595, 1325, 1456, 1770
Cfr42I	CCGCGG	1 cut(s)	376
CseI	GACGC	1 cut(s)	1166
CsiI	ACCWGGT	2 cut(s)	141, 1327
Csp6I	GTAC	3 cut(s)	739, 1522, 1643
CviQI	GTAC	3 cut(s)	739, 1522, 1643
DdeI	CTNAG	3 cut(s)	708, 1452, 1830
DinI	GGCGCC	2 cut(s)	64, 113
DpnI	GATC	6 cut(s)	323, 381, 404, 441, 1695, 1842
DpnII	GATC	6 cut(s)	321, 379, 402, 439, 1693, 1840
DrdI	GACNNNNNNGTC	1 cut(s)	434
DseDI	GACNNNNNNGTC	1 cut(s)	434
EaeI	YGGCCR	3 cut(s)	72, 370, 1648
EagI	CGGCCG	2 cut(s)	72, 370
Eam1104I	CTCTTC	9 cut(s)	197, 308, 317, 459, 534, 657, 1583, 1653, 1804
EarI	CTCTTC	9 cut(s)	197, 308, 317, 459, 534, 657, 1583, 1653, 1804
EciI	GGCGGA	1 cut(s)	23
Ecl136II	GAGCTC	1 cut(s)	1275
EclXI	CGGCCG	2 cut(s)	72, 370
Eco24I	GRGCYC	2 cut(s)	1277, 1420
Eco47I	GGWCC	3 cut(s)	595, 1325, 1456
Eco52I	CGGCCG	2 cut(s)	72, 370
Eco53kI	GAGCTC	1 cut(s)	1275
Eco57I	CTGAAG	1 cut(s)	1446
EcoICRI	GAGCTC	1 cut(s)	1275
EcoO109I	RGGNCCY	2 cut(s)	1325, 1456
EcoRII	CCWGG	4 cut(s)	141, 576, 1327, 1645
EcoT38I	GRGCYC	2 cut(s)	1277, 1420
EgeI	GGCGCC	2 cut(s)	64, 113
EheI	GGCGCC	2 cut(s)	64, 113
FalI	AAGNNNNNCTT	4 cut(s)	413, 445, 710, 742
FaqI	GGGAC	2 cut(s)	1112, 1619
FauNDI	CATATG	1 cut(s)	1169
FblI	GTMKAC	2 cut(s)	7, 84
FokI	GGATG	4 cut(s)	970, 1160, 1174, 1885
FriOI	GRGCYC	2 cut(s)	1277, 1420
FspBI	CTAG	5 cut(s)	51, 360, 1322, 1380, 1854
GlaI	GCGC	3 cut(s)	64, 113, 1443
GsaI	CCCAGC	1 cut(s)	357
GsuI	CTGGAG	1 cut(s)	26
HaeII	RGCGCY	2 cut(s)	66, 115
HaeIII	GGCC	4 cut(s)	74, 372, 1650, 1772
HapII	CCGG	1 cut(s)	23
HgaI	GACGC	1 cut(s)	1166
HhaI	GCGC	3 cut(s)	65, 114, 1444
Hin1I	GRCGYC	2 cut(s)	63, 112
Hin6I	GCGC	3 cut(s)	63, 112, 1442
HinP1I	GCGC	3 cut(s)	63, 112, 1442
HindIII	AAGCTT	1 cut(s)	1434
HinfI	GANTC	7 cut(s)	121, 134, 611, 684, 1049, 1762, 1847
HpaII	CCGG	1 cut(s)	23
HphI	GGTGA	7 cut(s)	7, 268, 1343, 1355, 1523, 1724, 1733
Hpy166II	GTNNAC	2 cut(s)	8, 85
Hpy188I	TCNGA	6 cut(s)	139, 427, 658, 1259, 1407, 1872
Hpy188III	TCNNGA	5 cut(s)	43, 125, 1160, 1220, 1844
Hpy8I	GTNNAC	2 cut(s)	8, 85
Hpy99I	CGWCG	5 cut(s)	62, 230, 437, 440, 1125
HpyAV	CCTTC	6 cut(s)	232, 289, 1217, 1404, 1499, 1572
HpyCH4III	ACNGT	2 cut(s)	1411, 1712
HpyCH4IV	ACGT	2 cut(s)	994, 1641
HpyF10VI	GCNNNNNNNGC	8 cut(s)	60, 71, 237, 240, 347, 1448, 1494, 1888
HpyF3I	CTNAG	3 cut(s)	708, 1452, 1830
HpySE526I	ACGT	2 cut(s)	994, 1641
Hsp92I	GRCGYC	2 cut(s)	63, 112
HspAI	GCGC	3 cut(s)	63, 112, 1442
KasI	GGCGCC	2 cut(s)	62, 111
KspI	CCGCGG	1 cut(s)	376
Kzo9I	GATC	6 cut(s)	321, 379, 402, 439, 1693, 1840
LmnI	GCTCC	4 cut(s)	102, 293, 476, 1280
Lsp1109I	GCAGC	6 cut(s)	227, 433, 700, 1108, 1555, 1783
LweI	GCATC	7 cut(s)	189, 640, 973, 1153, 1233, 1359, 1854
MabI	ACCWGGT	2 cut(s)	141, 1327
MaeI	CTAG	5 cut(s)	51, 360, 1322, 1380, 1854
MaeII	ACGT	2 cut(s)	994, 1641
MaeIII	GTNAC	5 cut(s)	274, 556, 972, 1331, 1664
MalI	GATC	6 cut(s)	323, 381, 404, 441, 1695, 1842
MbiI	CCGCTC	1 cut(s)	288
MboI	GATC	6 cut(s)	321, 379, 402, 439, 1693, 1840
MflI	RGATCY	1 cut(s)	1693
MhlI	GDGCHC	4 cut(s)	93, 806, 1277, 1420
MlsI	TGGCCA	1 cut(s)	1650
MluCI	AATT	5 cut(s)	29, 459, 509, 1753, 1790
MluNI	TGGCCA	1 cut(s)	1650
Mly113I	GGCGCC	2 cut(s)	63, 112
MlyI	GAGTC	1 cut(s)	128
MmeI	TCCRAC	3 cut(s)	162, 450, 500
Mox20I	TGGCCA	1 cut(s)	1650
MroXI	GAANNNNTTC	1 cut(s)	996
MscI	TGGCCA	1 cut(s)	1650
MseI	TTAA	9 cut(s)	675, 702, 764, 933, 1308, 1461, 1584, 1748, 1878
Msp20I	TGGCCA	1 cut(s)	1650
MspA1I	CMGCKG	2 cut(s)	375, 1834
MspCI	CTTAAG	1 cut(s)	1460
MspI	CCGG	1 cut(s)	23
MspR9I	CCNGG	4 cut(s)	143, 578, 1329, 1647
Mva1269I	GAATGC	2 cut(s)	341, 1060
MvaI	CCWGG	4 cut(s)	143, 578, 1329, 1647
MvnI	CGCG	1 cut(s)	375
MwoI	GCNNNNNNNGC	8 cut(s)	60, 71, 237, 240, 347, 1448, 1494, 1888
NarI	GGCGCC	2 cut(s)	63, 112
NdeI	CATATG	1 cut(s)	1169
NdeII	GATC	6 cut(s)	321, 379, 402, 439, 1693, 1840
NlaIV	GGNNCC	5 cut(s)	64, 113, 158, 478, 1771
NmeAIII	GCCGAG	1 cut(s)	50
NmuCI	GTSAC	3 cut(s)	274, 556, 1331
NspI	RCATGY	3 cut(s)	886, 1393, 1514
PaeI	GCATGC	2 cut(s)	1393, 1514
PcsI	WCGNNNNNNNCGW	3 cut(s)	231, 270, 375
PctI	GAATGC	2 cut(s)	341, 1060
PdmI	GAANNNNTTC	1 cut(s)	996
PfeI	GAWTC	6 cut(s)	121, 611, 684, 1049, 1762, 1847
PflFI	GACNNNGTC	1 cut(s)	431
PfoI	TCCNGGA	1 cut(s)	576
PleI	GAGTC	1 cut(s)	128
PluTI	GGCGCC	2 cut(s)	66, 115
PpsI	GAGTC	1 cut(s)	128
Ppu21I	YACGTR	1 cut(s)	1642
PpuMI	RGGWCCY	2 cut(s)	1325, 1456
Psp124BI	GAGCTC	1 cut(s)	1277
Psp5II	RGGWCCY	2 cut(s)	1325, 1456
Psp6I	CCWGG	4 cut(s)	141, 576, 1327, 1645
PspFI	CCCAGC	1 cut(s)	353
PspGI	CCWGG	4 cut(s)	141, 576, 1327, 1645
PspN4I	GGNNCC	5 cut(s)	64, 113, 158, 478, 1771
PspPI	GGNCC	4 cut(s)	595, 1325, 1456, 1770
PspPPI	RGGWCCY	2 cut(s)	1325, 1456
PsuI	RGATCY	1 cut(s)	1693
PsyI	GACNNNGTC	1 cut(s)	431
PvuII	CAGCTG	1 cut(s)	1834
RsaI	GTAC	3 cut(s)	740, 1523, 1644
RsaNI	GTAC	3 cut(s)	739, 1522, 1643
SacI	GAGCTC	1 cut(s)	1277
SacII	CCGCGG	1 cut(s)	376
SaqAI	TTAA	9 cut(s)	675, 702, 764, 933, 1308, 1461, 1584, 1748, 1878
Sau3AI	GATC	6 cut(s)	321, 379, 402, 439, 1693, 1840
Sau96I	GGNCC	4 cut(s)	595, 1325, 1456, 1770
ScaI	AGTACT	1 cut(s)	740
SchI	GAGTC	1 cut(s)	128
ScrFI	CCNGG	4 cut(s)	143, 578, 1329, 1647
SduI	GDGCHC	4 cut(s)	93, 806, 1277, 1420
SexAI	ACCWGGT	2 cut(s)	141, 1327
SfaNI	GCATC	7 cut(s)	189, 640, 973, 1153, 1233, 1359, 1854
SfcI	CTRYAG	3 cut(s)	568, 1505, 1902
SfoI	GGCGCC	2 cut(s)	64, 113
Sfr303I	CCGCGG	1 cut(s)	376
SgrBI	CCGCGG	1 cut(s)	376
SinI	GGWCC	3 cut(s)	595, 1325, 1456
SmlI	CTYRAG	3 cut(s)	419, 1268, 1460
SmoI	CTYRAG	3 cut(s)	419, 1268, 1460
SpeI	ACTAGT	1 cut(s)	1853
SphI	GCATGC	2 cut(s)	1393, 1514
Sse9I	AATT	5 cut(s)	29, 459, 509, 1753, 1790
SspDI	GGCGCC	2 cut(s)	62, 111
SspMI	CTAG	5 cut(s)	51, 360, 1322, 1380, 1854
SstI	GAGCTC	1 cut(s)	1277
StyD4I	CCNGG	4 cut(s)	141, 576, 1327, 1645
TaaI	ACNGT	2 cut(s)	1411, 1712
TaiI	ACGT	2 cut(s)	997, 1644
TaqI	TCGA	7 cut(s)	126, 198, 438, 918, 1074, 1447, 1733
TasI	AATT	5 cut(s)	29, 459, 509, 1753, 1790
TatI	WGTACW	1 cut(s)	738
TauI	GCSGC	8 cut(s)	57, 77, 188, 234, 261, 375, 378, 508
TfiI	GAWTC	6 cut(s)	121, 611, 684, 1049, 1762, 1847
Tru1I	TTAA	9 cut(s)	675, 702, 764, 933, 1308, 1461, 1584, 1748, 1878
Tru9I	TTAA	9 cut(s)	675, 702, 764, 933, 1308, 1461, 1584, 1748, 1878
TscAI	CASTG	1 cut(s)	1429
TseFI	GTSAC	3 cut(s)	274, 556, 1331
TseI	GCWGC	6 cut(s)	240, 446, 713, 1096, 1568, 1796
Tsp45I	GTSAC	3 cut(s)	274, 556, 1331
TspDTI	ATGAA	8 cut(s)	184, 334, 675, 1053, 1059, 1101, 1549, 1775
TspGWI	ACGGA	1 cut(s)	542
TspRI	CASTG	1 cut(s)	1429
Tth111I	GACNNNGTC	1 cut(s)	431
Vha464I	CTTAAG	1 cut(s)	1460
VpaK11BI	GGWCC	3 cut(s)	595, 1325, 1456
XapI	RAATTY	2 cut(s)	29, 1790
XceI	RCATGY	3 cut(s)	886, 1393, 1514
XmiI	GTMKAC	2 cut(s)	7, 84
XmnI	GAANNNNTTC	1 cut(s)	996
XspI	CTAG	5 cut(s)	51, 360, 1322, 1380, 1854
ZrmI	AGTACT	1 cut(s)	740

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.