mTERF
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G14605 AT4G14605 |
| fragaria_vesca | FvH4_6g53060 FvH4_6g53060 |
| malus_domestica | MD17G1015100.v1.1 |
| prunus_persica | Prupe.3G302700_v2.0.a1 Prupe.3G302700_v2.0.a1 Prupe.3G302700_v2.0.a1 Prupe.3G302700_v2.0.a1 |
| pyrus_communis | pycom17g01220 |
| rosa_chinensis | RchiOBHm_Chr2g0174841 |
| rosa_laevigata | RLG00000022300 |
| rosa_roxburghii | Rroxscaffold_2G00077650 |
| rosa_rugosa | Rorug02G0579700 |
| rosa_samantha | Rh2AG661000 Rh2BG672400 Rh2CG635200 Rh2DG685500 |
| rosa_wichuraiana | Rw2G054170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 304 |
| Acc36I | ACCTGC | 1 cut(s) | 304 |
| AccB1I | GGYRCC | 1 cut(s) | 999 |
| AccII | CGCG | 1 cut(s) | 673 |
| AciI | CCGC | 5 cut(s) | 170, 300, 801, 892, 1457 |
| AclWI | GGATC | 3 cut(s) | 654, 812, 1469 |
| AcsI | RAATTY | 1 cut(s) | 1301 |
| AfaI | GTAC | 2 cut(s) | 1055, 1494 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 448, 859 |
| AflIII | ACRYGT | 1 cut(s) | 92 |
| AgeI | ACCGGT | 1 cut(s) | 523 |
| AgsI | TTSAA | 9 cut(s) | 78, 85, 271, 437, 556, 565, 1138, 1203, 1390 |
| AjiI | CACGTC | 2 cut(s) | 93, 389 |
| Alw26I | GTCTC | 1 cut(s) | 287 |
| AlwI | GGATC | 3 cut(s) | 654, 812, 1469 |
| AoxI | GGCC | 6 cut(s) | 592, 788, 961, 1040, 1114, 1128 |
| ApeKI | GCWGC | 2 cut(s) | 227, 1460 |
| ApoI | RAATTY | 1 cut(s) | 1301 |
| AsiGI | ACCGGT | 1 cut(s) | 523 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 441, 486 |
| AspA2I | CCTAGG | 1 cut(s) | 853 |
| AspLEI | GCGC | 2 cut(s) | 673, 675 |
| AspS9I | GGNCC | 4 cut(s) | 593, 751, 961, 1041 |
| AsuC2I | CCSGG | 1 cut(s) | 373 |
| AsuHPI | GGTGA | 3 cut(s) | 329, 940, 1481 |
| AvaII | GGWCC | 1 cut(s) | 751 |
| AvrII | CCTAGG | 1 cut(s) | 853 |
| BaeGI | GKGCMC | 1 cut(s) | 1004 |
| BanI | GGYRCC | 1 cut(s) | 999 |
| BbvCI | CCTCAGC | 1 cut(s) | 792 |
| BbvI | GCAGC | 2 cut(s) | 239, 1447 |
| BccI | CCATC | 2 cut(s) | 619, 691 |
| BceAI | ACGGC | 1 cut(s) | 1055 |
| BclI | TGATCA | 1 cut(s) | 334 |
| BcnI | CCSGG | 1 cut(s) | 373 |
| BcoDI | GTCTC | 1 cut(s) | 287 |
| BfaI | CTAG | 5 cut(s) | 380, 446, 576, 854, 1067 |
| BfmI | CTRYAG | 1 cut(s) | 697 |
| BfuAI | ACCTGC | 1 cut(s) | 304 |
| BisI | GCNGC | 4 cut(s) | 228, 300, 1458, 1461 |
| BlnI | CCTAGG | 1 cut(s) | 853 |
| BlsI | GCNGC | 4 cut(s) | 229, 301, 1459, 1462 |
| BmcAI | AGTACT | 1 cut(s) | 1055 |
| Bme1390I | CCNGG | 1 cut(s) | 373 |
| Bme18I | GGWCC | 1 cut(s) | 751 |
| BmgBI | CACGTC | 2 cut(s) | 93, 389 |
| BmgT120I | GGNCC | 4 cut(s) | 593, 751, 961, 1041 |
| BmiI | GGNNCC | 4 cut(s) | 752, 753, 1001, 1213 |
| BmrFI | CCNGG | 1 cut(s) | 373 |
| BmrI | ACTGGG | 1 cut(s) | 532 |
| BmsI | GCATC | 3 cut(s) | 484, 1102, 1236 |
| BmuI | ACTGGG | 1 cut(s) | 532 |
| BpmI | CTGGAG | 1 cut(s) | 198 |
| Bpu10I | CCTNAGC | 1 cut(s) | 792 |
| BpuEI | CTTGAG | 1 cut(s) | 425 |
| BpuMI | CCSGG | 1 cut(s) | 373 |
| Bsa29I | ATCGAT | 1 cut(s) | 1096 |
| BsaBI | GATNNNNATC | 2 cut(s) | 651, 682 |
| BsaI | GGTCTC | 1 cut(s) | 287 |
| BsaJI | CCNNGG | 2 cut(s) | 853, 1272 |
| BsaWI | WCCGGW | 1 cut(s) | 523 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 448, 859 |
| Bse118I | RCCGGY | 1 cut(s) | 523 |
| Bse1I | ACTGG | 6 cut(s) | 55, 210, 500, 515, 538, 1393 |
| Bse3DI | GCAATG | 1 cut(s) | 70 |
| Bse8I | GATNNNNATC | 2 cut(s) | 651, 682 |
| BseCI | ATCGAT | 1 cut(s) | 1096 |
| BseDI | CCNNGG | 2 cut(s) | 853, 1272 |
| BseGI | GGATG | 1 cut(s) | 1081 |
| BseJI | GATNNNNATC | 2 cut(s) | 651, 682 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 448, 859 |
| BseMI | GCAATG | 1 cut(s) | 70 |
| BseMII | CTCAG | 5 cut(s) | 98, 222, 298, 806, 1041 |
| BseNI | ACTGG | 6 cut(s) | 55, 210, 500, 515, 538, 1393 |
| BsePI | GCGCGC | 1 cut(s) | 671 |
| BseRI | GAGGAG | 2 cut(s) | 18, 464 |
| BseSI | GKGCMC | 1 cut(s) | 1004 |
| BseXI | GCAGC | 2 cut(s) | 239, 1447 |
| BseYI | CCCAGC | 2 cut(s) | 595, 599 |
| Bsh1236I | CGCG | 1 cut(s) | 673 |
| BshFI | GGCC | 6 cut(s) | 594, 790, 963, 1042, 1116, 1130 |
| BshNI | GGYRCC | 1 cut(s) | 999 |
| BshTI | ACCGGT | 1 cut(s) | 523 |
| BshVI | ATCGAT | 1 cut(s) | 1096 |
| BsiSI | CCGG | 2 cut(s) | 373, 524 |
| BslFI | GGGAC | 3 cut(s) | 202, 737, 1204 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 448, 859 |
| BsmAI | GTCTC | 1 cut(s) | 287 |
| BsmFI | GGGAC | 3 cut(s) | 202, 737, 1204 |
| BsnI | GGCC | 6 cut(s) | 594, 790, 963, 1042, 1116, 1130 |
| Bso31I | GGTCTC | 1 cut(s) | 287 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1004 |
| Bsp143I | GATC | 8 cut(s) | 334, 646, 652, 742, 804, 975, 1097, 1474 |
| Bsp19I | CCATGG | 1 cut(s) | 1272 |
| BspACI | CCGC | 5 cut(s) | 170, 300, 801, 892, 1457 |
| BspANI | GGCC | 6 cut(s) | 594, 790, 963, 1042, 1116, 1130 |
| BspCNI | CTCAG | 5 cut(s) | 99, 223, 297, 805, 1042 |
| BspDI | ATCGAT | 1 cut(s) | 1096 |
| BspFNI | CGCG | 1 cut(s) | 673 |
| BspLI | GGNNCC | 4 cut(s) | 752, 753, 1001, 1213 |
| BspMI | ACCTGC | 1 cut(s) | 304 |
| BspPI | GGATC | 3 cut(s) | 654, 812, 1469 |
| BspQI | GCTCTTC | 1 cut(s) | 152 |
| BspT107I | GGYRCC | 1 cut(s) | 999 |
| BspTNI | GGTCTC | 1 cut(s) | 287 |
| BsrDI | GCAATG | 1 cut(s) | 70 |
| BsrFI | RCCGGY | 1 cut(s) | 523 |
| BsrI | ACTGG | 6 cut(s) | 55, 210, 500, 515, 538, 1393 |
| BssAI | RCCGGY | 1 cut(s) | 523 |
| BssECI | CCNNGG | 2 cut(s) | 853, 1272 |
| BssHII | GCGCGC | 1 cut(s) | 671 |
| BssMI | GATC | 8 cut(s) | 334, 646, 652, 742, 804, 975, 1097, 1474 |
| BssT1I | CCWWGG | 2 cut(s) | 853, 1272 |
| Bst4CI | ACNGT | 6 cut(s) | 701, 727, 873, 940, 1022, 1108 |
| Bst6I | CTCTTC | 2 cut(s) | 152, 966 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 167 |
| BstC8I | GCNNGC | 2 cut(s) | 673, 920 |
| BstDEI | CTNAG | 7 cut(s) | 107, 231, 284, 792, 844, 1050, 1118 |
| BstDSI | CCRYGG | 1 cut(s) | 1272 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 446 |
| BstF5I | GGATG | 1 cut(s) | 1081 |
| BstFNI | CGCG | 1 cut(s) | 673 |
| BstHHI | GCGC | 2 cut(s) | 673, 675 |
| BstKTI | GATC | 8 cut(s) | 337, 649, 655, 745, 807, 978, 1100, 1477 |
| BstMAI | GTCTC | 1 cut(s) | 287 |
| BstMBI | GATC | 8 cut(s) | 334, 646, 652, 742, 804, 975, 1097, 1474 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 167, 224 |
| BstSCI | CCNGG | 1 cut(s) | 371 |
| BstSFI | CTRYAG | 1 cut(s) | 697 |
| BstSLI | GKGCMC | 1 cut(s) | 1004 |
| BstUI | CGCG | 1 cut(s) | 673 |
| BstV1I | GCAGC | 2 cut(s) | 239, 1447 |
| BstX2I | RGATCY | 2 cut(s) | 646, 1474 |
| BstYI | RGATCY | 2 cut(s) | 646, 1474 |
| Bsu15I | ATCGAT | 1 cut(s) | 1096 |
| BsuRI | GGCC | 6 cut(s) | 594, 790, 963, 1042, 1116, 1130 |
| BsuTUI | ATCGAT | 1 cut(s) | 1096 |
| BtgI | CCRYGG | 1 cut(s) | 1272 |
| BtrI | CACGTC | 2 cut(s) | 93, 389 |
| BtsCI | GGATG | 1 cut(s) | 1081 |
| BtsIMutI | CAGTG | 4 cut(s) | 104, 878, 1027, 1113 |
| BveI | ACCTGC | 1 cut(s) | 304 |
| Cac8I | GCNNGC | 2 cut(s) | 673, 920 |
| CfoI | GCGC | 2 cut(s) | 673, 675 |
| Cfr10I | RCCGGY | 1 cut(s) | 523 |
| Cfr13I | GGNCC | 4 cut(s) | 593, 751, 961, 1041 |
| ClaI | ATCGAT | 1 cut(s) | 1096 |
| Csp6I | GTAC | 2 cut(s) | 1054, 1493 |
| CspAI | ACCGGT | 1 cut(s) | 523 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1093, 1128 |
| CviAII | CATG | 3 cut(s) | 455, 835, 1273 |
| CviQI | GTAC | 2 cut(s) | 1054, 1493 |
| DdeI | CTNAG | 7 cut(s) | 107, 231, 284, 792, 844, 1050, 1118 |
| DpnI | GATC | 8 cut(s) | 336, 648, 654, 744, 806, 977, 1099, 1476 |
| DpnII | GATC | 8 cut(s) | 334, 646, 652, 742, 804, 975, 1097, 1474 |
| Eam1104I | CTCTTC | 2 cut(s) | 152, 966 |
| EarI | CTCTTC | 2 cut(s) | 152, 966 |
| Eco130I | CCWWGG | 2 cut(s) | 853, 1272 |
| Eco147I | AGGCCT | 1 cut(s) | 790 |
| Eco31I | GGTCTC | 1 cut(s) | 287 |
| Eco47I | GGWCC | 1 cut(s) | 751 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 446 |
| EcoO109I | RGGNCCY | 1 cut(s) | 751 |
| EcoT14I | CCWWGG | 2 cut(s) | 853, 1272 |
| ErhI | CCWWGG | 2 cut(s) | 853, 1272 |
| FaeI | CATG | 3 cut(s) | 458, 838, 1276 |
| FaqI | GGGAC | 3 cut(s) | 202, 737, 1204 |
| FatI | CATG | 3 cut(s) | 454, 834, 1272 |
| FauI | CCCGC | 1 cut(s) | 794 |
| FbaI | TGATCA | 1 cut(s) | 334 |
| Fnu4HI | GCNGC | 4 cut(s) | 228, 300, 1458, 1461 |
| FokI | GGATG | 1 cut(s) | 1088 |
| Fsp4HI | GCNGC | 4 cut(s) | 228, 300, 1458, 1461 |
| FspBI | CTAG | 5 cut(s) | 380, 446, 576, 854, 1067 |
| GlaI | GCGC | 2 cut(s) | 672, 674 |
| GluI | GCNGC | 4 cut(s) | 228, 300, 1458, 1461 |
| GsaI | CCCAGC | 2 cut(s) | 599, 603 |
| GsuI | CTGGAG | 1 cut(s) | 198 |
| HaeIII | GGCC | 6 cut(s) | 594, 790, 963, 1042, 1116, 1130 |
| HapII | CCGG | 2 cut(s) | 373, 524 |
| HhaI | GCGC | 2 cut(s) | 673, 675 |
| Hin1II | CATG | 3 cut(s) | 458, 838, 1276 |
| Hin6I | GCGC | 2 cut(s) | 671, 673 |
| HinP1I | GCGC | 2 cut(s) | 671, 673 |
| HincII | GTYRAC | 1 cut(s) | 550 |
| HindII | GTYRAC | 1 cut(s) | 550 |
| HindIII | AAGCTT | 4 cut(s) | 6, 79, 484, 605 |
| HinfI | GANTC | 4 cut(s) | 74, 173, 437, 840 |
| HpaII | CCGG | 2 cut(s) | 373, 524 |
| HphI | GGTGA | 3 cut(s) | 329, 940, 1481 |
| Hpy166II | GTNNAC | 2 cut(s) | 550, 862 |
| Hpy188I | TCNGA | 5 cut(s) | 47, 322, 763, 970, 1291 |
| Hpy188III | TCNNGA | 7 cut(s) | 256, 268, 404, 446, 491, 576, 650 |
| Hpy8I | GTNNAC | 2 cut(s) | 550, 862 |
| HpyAV | CCTTC | 7 cut(s) | 33, 48, 179, 452, 914, 919, 1357 |
| HpyCH4III | ACNGT | 6 cut(s) | 701, 727, 873, 940, 1022, 1108 |
| HpyCH4IV | ACGT | 3 cut(s) | 92, 388, 1223 |
| HpyCH4V | TGCA | 6 cut(s) | 34, 63, 497, 521, 1093, 1355 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 167, 224 |
| HpyF3I | CTNAG | 7 cut(s) | 107, 231, 284, 792, 844, 1050, 1118 |
| HpySE526I | ACGT | 3 cut(s) | 92, 388, 1223 |
| Hsp92II | CATG | 3 cut(s) | 458, 838, 1276 |
| HspAI | GCGC | 2 cut(s) | 671, 673 |
| KflI | GGGWCCC | 1 cut(s) | 751 |
| Ksp22I | TGATCA | 1 cut(s) | 334 |
| Kzo9I | GATC | 8 cut(s) | 334, 646, 652, 742, 804, 975, 1097, 1474 |
| LguI | GCTCTTC | 1 cut(s) | 152 |
| LmnI | GCTCC | 3 cut(s) | 322, 451, 1211 |
| Lsp1109I | GCAGC | 2 cut(s) | 239, 1447 |
| LweI | GCATC | 3 cut(s) | 484, 1102, 1236 |
| MaeI | CTAG | 5 cut(s) | 380, 446, 576, 854, 1067 |
| MaeII | ACGT | 3 cut(s) | 92, 388, 1223 |
| MaeIII | GTNAC | 5 cut(s) | 14, 1016, 1035, 1144, 1380 |
| MalI | GATC | 8 cut(s) | 336, 648, 654, 744, 806, 977, 1099, 1476 |
| MboI | GATC | 8 cut(s) | 334, 646, 652, 742, 804, 975, 1097, 1474 |
| MboII | GAAGA | 9 cut(s) | 139, 251, 283, 568, 724, 983, 1079, 1193, 1484 |
| MflI | RGATCY | 2 cut(s) | 646, 1474 |
| MhlI | GDGCHC | 1 cut(s) | 1004 |
| MluCI | AATT | 4 cut(s) | 1011, 1185, 1301, 1443 |
| MlyI | GAGTC | 1 cut(s) | 167 |
| MmeI | TCCRAC | 1 cut(s) | 300 |
| MroXI | GAANNNNTTC | 2 cut(s) | 441, 486 |
| MseI | TTAA | 9 cut(s) | 195, 200, 504, 531, 783, 992, 1299, 1341, 1434 |
| MspA1I | CMGCKG | 4 cut(s) | 230, 599, 796, 1049 |
| MspI | CCGG | 2 cut(s) | 373, 524 |
| MspR9I | CCNGG | 1 cut(s) | 373 |
| MvnI | CGCG | 1 cut(s) | 673 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 167, 224 |
| NciI | CCSGG | 1 cut(s) | 373 |
| NcoI | CCATGG | 1 cut(s) | 1272 |
| NdeII | GATC | 8 cut(s) | 334, 646, 652, 742, 804, 975, 1097, 1474 |
| NlaIII | CATG | 3 cut(s) | 458, 838, 1276 |
| NlaIV | GGNNCC | 4 cut(s) | 752, 753, 1001, 1213 |
| NmuCI | GTSAC | 2 cut(s) | 14, 1144 |
| PaqCI | CACCTGC | 1 cut(s) | 304 |
| PauI | GCGCGC | 1 cut(s) | 671 |
| PceI | AGGCCT | 1 cut(s) | 790 |
| PciSI | GCTCTTC | 1 cut(s) | 152 |
| PdmI | GAANNNNTTC | 2 cut(s) | 441, 486 |
| PfeI | GAWTC | 3 cut(s) | 74, 437, 840 |
| PinAI | ACCGGT | 1 cut(s) | 523 |
| PkrI | GCNGC | 4 cut(s) | 229, 301, 1459, 1462 |
| PleI | GAGTC | 1 cut(s) | 167 |
| PpsI | GAGTC | 1 cut(s) | 167 |
| PpuMI | RGGWCCY | 1 cut(s) | 751 |
| Psp5II | RGGWCCY | 1 cut(s) | 751 |
| PspFI | CCCAGC | 2 cut(s) | 595, 599 |
| PspN4I | GGNNCC | 4 cut(s) | 752, 753, 1001, 1213 |
| PspPI | GGNCC | 4 cut(s) | 593, 751, 961, 1041 |
| PspPPI | RGGWCCY | 1 cut(s) | 751 |
| PsuI | RGATCY | 2 cut(s) | 646, 1474 |
| PteI | GCGCGC | 1 cut(s) | 671 |
| PvuII | CAGCTG | 4 cut(s) | 230, 599, 796, 1049 |
| RsaI | GTAC | 2 cut(s) | 1055, 1494 |
| RsaNI | GTAC | 2 cut(s) | 1054, 1493 |
| SapI | GCTCTTC | 1 cut(s) | 152 |
| SaqAI | TTAA | 9 cut(s) | 195, 200, 504, 531, 783, 992, 1299, 1341, 1434 |
| SatI | GCNGC | 4 cut(s) | 228, 300, 1458, 1461 |
| Sau3AI | GATC | 8 cut(s) | 334, 646, 652, 742, 804, 975, 1097, 1474 |
| Sau96I | GGNCC | 4 cut(s) | 593, 751, 961, 1041 |
| ScaI | AGTACT | 1 cut(s) | 1055 |
| SchI | GAGTC | 1 cut(s) | 167 |
| ScrFI | CCNGG | 1 cut(s) | 373 |
| SduI | GDGCHC | 1 cut(s) | 1004 |
| SfaNI | GCATC | 3 cut(s) | 484, 1102, 1236 |
| SfcI | CTRYAG | 1 cut(s) | 697 |
| SinI | GGWCC | 1 cut(s) | 751 |
| SmlI | CTYRAG | 1 cut(s) | 404 |
| SmoI | CTYRAG | 1 cut(s) | 404 |
| Sse9I | AATT | 4 cut(s) | 1011, 1185, 1301, 1443 |
| SseBI | AGGCCT | 1 cut(s) | 790 |
| SsiI | CCGC | 5 cut(s) | 170, 300, 801, 892, 1457 |
| SspI | AATATT | 1 cut(s) | 823 |
| SspMI | CTAG | 5 cut(s) | 380, 446, 576, 854, 1067 |
| StuI | AGGCCT | 1 cut(s) | 790 |
| StyD4I | CCNGG | 1 cut(s) | 371 |
| StyI | CCWWGG | 2 cut(s) | 853, 1272 |
| TaaI | ACNGT | 6 cut(s) | 701, 727, 873, 940, 1022, 1108 |
| TaiI | ACGT | 3 cut(s) | 95, 391, 1226 |
| TaqI | TCGA | 5 cut(s) | 157, 345, 651, 1026, 1096 |
| TasI | AATT | 4 cut(s) | 1011, 1185, 1301, 1443 |
| TatI | WGTACW | 2 cut(s) | 1053, 1492 |
| TauI | GCSGC | 2 cut(s) | 302, 1460 |
| TfiI | GAWTC | 3 cut(s) | 74, 437, 840 |
| Tru1I | TTAA | 9 cut(s) | 195, 200, 504, 531, 783, 992, 1299, 1341, 1434 |
| Tru9I | TTAA | 9 cut(s) | 195, 200, 504, 531, 783, 992, 1299, 1341, 1434 |
| TscAI | CASTG | 4 cut(s) | 111, 878, 1027, 1113 |
| TseFI | GTSAC | 2 cut(s) | 14, 1144 |
| TseI | GCWGC | 2 cut(s) | 227, 1460 |
| Tsp45I | GTSAC | 2 cut(s) | 14, 1144 |
| TspDTI | ATGAA | 7 cut(s) | 139, 319, 344, 353, 969, 1147, 1376 |
| TspGWI | ACGGA | 1 cut(s) | 1351 |
| TspRI | CASTG | 4 cut(s) | 111, 878, 1027, 1113 |
| VpaK11BI | GGWCC | 1 cut(s) | 751 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 446 |
| XapI | RAATTY | 1 cut(s) | 1301 |
| XbaI | TCTAGA | 2 cut(s) | 445, 575 |
| XmaJI | CCTAGG | 1 cut(s) | 853 |
| XmnI | GAANNNNTTC | 2 cut(s) | 441, 486 |
| XspI | CTAG | 5 cut(s) | 380, 446, 576, 854, 1067 |
| ZrmI | AGTACT | 1 cut(s) | 1055 |