RchiOBHm_Chr2g0174841
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
87312233 .. 87315196
2964 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54198

Sequence Viewer

Length: 1515 bp
ATGAAAGCATTCTGCGCCATACGGGTCGCCGACTTTGCTTCTCCTCTACAAGTCTTATTCAGCACCGGAAGGTGTTGCAATGTGAATGATTCAAGCTTCAAGTTGACGTATCACTACCCACTGAAGTTTGTGAGGACGAGAGTTGCTTTCCCTCAAAAGCTATTTATCTGTCGGGCGAGGTTTGCGGACTCTGGGGTGGAAGGGTCATTTAGCTTAAAGCTGGTATCTCCCGCTCTTTTGGCGGCTGAGAAAGAAGAAGCCAAAGCTGTCCTAACCTTGTTCTTGAAGAAACAAGGTCTCAGCCATACAATTGCTGCGAGAACCATAAACAAGTCGGAGCTTTTCATTGATCACCTTGTCGCTAGGCTTCATTCTGTTCATAAATCCCGGTATCTAGTAGGACGGGAGCTAACCACGCTTGAGATAAGGGAGGCTCTGATCCCTTACCTTGAATCCCTTCTAGAGGAGCATGGAATTTATATGGTAGATGTGGTGGAAAGCTTTCCAGATGCACCAGTTAAAGCAAAGCCAGCTGCACCAGTTATTAAATCTCAGTCATCTGTTGACTTAAAGAAGTTGAGAGCCATATCTAGAGTAAGTGAGATAGGCCCAGCTGGGAAGCTCCCACCTCACATCCTATACCTTTTAGAGCTTGGAATGGATCTTGATCAAATAAAGGGTATTGCACGCAGATTTCCATCTTTTGCCTACTACAGTTTGGAGGGAAAAATAAAACCAACTGTCGAGTTTCTCCTTGATCTTGGGGTCCCAAAATCTGATATTCCTACAATCCTCTTTAAGAGGCCTCAGCTGTGCGGAATCAGTCTTTATGAAAATATTATGCCCACCATGAGATTCTTAGAAAACCTAGGTGTGGACAAGAAACAGTGGGCAAAAGTGATATACCGCTTTCCAGCCCTCCTCACATATAGTAGGCAGAAGGTGAAAACAACAGTGGATTTCCTCTATGAAATGGGCCTTTCAGAAGAGATCATAGGTAAGGTTTTGACGAGGTGCCCGAACATTATAAGTTACAGTGTCGAGGAGAAGTTACGGCCCACAGCTGAGTACTTTTGCTCACTGGGGGTGGATGTTGGTGTTCTTCTAAGTCGATCTCCCACAGTTTTTGGCCTTAGTATTGAGGCCAACTTGAAGCCTGTGACAGAGTTTTTCTATGGAAGGGGATATACTATGGAGGAAATTGGAACCATGATTTCAAGGTATGGAGCTTTATATACTTTCAGCTTGACAGAGAACTTGATGCCGAAATGGGAGTTCTTTTTGACCATGGATTATTCAAAATCAGAGCTGGTTAAATTCCCTCAATACTTTGGTTATAGTTTGGTAGAAAGGATTAAACCAAGATATGCACTTATGAAGGAATGTGGAGTGATGTTACTATTGAACCAGTTGTTATCACTATCGGCTGCTAACTTTGATAAGGCTCTTAAAAAGAAAATTGAGAAAGTGGCTGCTGCCAATGGTGACGATCCTGACACAGACGTTGAAATATGA

Protein Analysis

504

Amino Acids

56.87

Weight (kDa)

9.02

Isoelectric Point (pI)

37.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 76 - 324 1.3e-21 mTERF
mTERF PF02536 313 - 479 1.9e-30 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012380)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1028
AccB1I GGYRCC 1 cut(s) 1014
AccBSI CCGCTC 1 cut(s) 233
AciI CCGC 5 cut(s) 185, 231, 242, 816, 907
AclWI GGATC 3 cut(s) 433, 669, 1484
AcsI RAATTY 2 cut(s) 474, 1316
AcuI CTGAAG 1 cut(s) 143
AfaI GTAC 1 cut(s) 1070
AfiI CCNNNNNNNGG 2 cut(s) 463, 874
AgsI TTSAA 9 cut(s) 93, 100, 286, 452, 1153, 1218, 1299, 1405, 1508
Alw26I GTCTC 1 cut(s) 302
AlwI GGATC 3 cut(s) 433, 669, 1484
AoxI GGCC 6 cut(s) 607, 803, 976, 1055, 1129, 1143
ApeKI GCWGC 5 cut(s) 314, 533, 1427, 1472, 1475
ApoI RAATTY 2 cut(s) 474, 1316
Asp700I GAANNNNTTC 3 cut(s) 8, 456, 501
AspA2I CCTAGG 1 cut(s) 868
AspLEI GCGC 1 cut(s) 17
AspS9I GGNCC 4 cut(s) 608, 766, 976, 1056
AsuC2I CCSGG 1 cut(s) 388
AsuHPI GGTGA 3 cut(s) 344, 955, 1496
AvaII GGWCC 1 cut(s) 766
AvrII CCTAGG 1 cut(s) 868
BaeGI GKGCMC 1 cut(s) 1019
BanI GGYRCC 1 cut(s) 1014
BarI GAAGNNNNNNTAC 2 cut(s) 1171, 1203
BbvCI CCTCAGC 1 cut(s) 807
BbvI GCAGC 5 cut(s) 301, 520, 1414, 1459, 1462
BccI CCATC 1 cut(s) 706
BceAI ACGGC 1 cut(s) 1070
BclI TGATCA 2 cut(s) 349, 667
BcnI CCSGG 1 cut(s) 388
BcoDI GTCTC 1 cut(s) 302
BfaI CTAG 5 cut(s) 363, 395, 461, 591, 869
BfmI CTRYAG 1 cut(s) 712
BisI GCNGC 6 cut(s) 243, 315, 534, 1428, 1473, 1476
BlnI CCTAGG 1 cut(s) 868
BlsI GCNGC 6 cut(s) 244, 316, 535, 1429, 1474, 1477
BmcAI AGTACT 1 cut(s) 1070
Bme1390I CCNGG 1 cut(s) 388
Bme18I GGWCC 1 cut(s) 766
BmgT120I GGNCC 4 cut(s) 608, 766, 976, 1056
BmiI GGNNCC 4 cut(s) 767, 768, 1016, 1207
BmrFI CCNGG 1 cut(s) 388
BmrI ACTGGG 1 cut(s) 1091
BmsI GCATC 2 cut(s) 499, 1251
BmuI ACTGGG 1 cut(s) 1091
Bpu10I CCTNAGC 1 cut(s) 807
BpuEI CTTGAG 1 cut(s) 440
BpuMI CCSGG 1 cut(s) 388
BsaBI GATNNNNATC 2 cut(s) 666, 697
BsaI GGTCTC 1 cut(s) 302
BsaJI CCNNGG 2 cut(s) 868, 1287
BsaWI WCCGGW 1 cut(s) 65
Bsc4I CCNNNNNNNGG 2 cut(s) 463, 874
Bse1I ACTGG 4 cut(s) 515, 539, 1086, 1408
Bse3DI GCAATG 1 cut(s) 85
Bse8I GATNNNNATC 2 cut(s) 666, 697
BseDI CCNNGG 2 cut(s) 868, 1287
BseGI GGATG 2 cut(s) 633, 1096
BseJI GATNNNNATC 2 cut(s) 666, 697
BseLI CCNNNNNNNGG 2 cut(s) 463, 874
BseMI GCAATG 1 cut(s) 85
BseMII CTCAG 5 cut(s) 237, 313, 566, 821, 1056
BseNI ACTGG 4 cut(s) 515, 539, 1086, 1408
BseRI GAGGAG 4 cut(s) 33, 479, 911, 1058
BseSI GKGCMC 1 cut(s) 1019
BseXI GCAGC 5 cut(s) 301, 520, 1414, 1459, 1462
BseYI CCCAGC 2 cut(s) 610, 614
BsgI GTGCAG 1 cut(s) 519
BshFI GGCC 6 cut(s) 609, 805, 978, 1057, 1131, 1145
BshNI GGYRCC 1 cut(s) 1014
BsiSI CCGG 2 cut(s) 66, 388
BslFI GGGAC 1 cut(s) 752
BslI CCNNNNNNNGG 2 cut(s) 463, 874
BsmAI GTCTC 1 cut(s) 302
BsmFI GGGAC 1 cut(s) 752
BsmI GAATGC 1 cut(s) 8
BsnI GGCC 6 cut(s) 609, 805, 978, 1057, 1131, 1145
Bso31I GGTCTC 1 cut(s) 302
Bsp1286I GDGCHC 1 cut(s) 1019
Bsp143I GATC 8 cut(s) 349, 438, 661, 667, 757, 990, 1112, 1489
Bsp19I CCATGG 1 cut(s) 1287
BspACI CCGC 5 cut(s) 185, 231, 242, 816, 907
BspANI GGCC 6 cut(s) 609, 805, 978, 1057, 1131, 1145
BspCNI CTCAG 5 cut(s) 238, 312, 565, 820, 1057
BspLI GGNNCC 4 cut(s) 767, 768, 1016, 1207
BspPI GGATC 3 cut(s) 433, 669, 1484
BspT107I GGYRCC 1 cut(s) 1014
BspTNI GGTCTC 1 cut(s) 302
BsrBI CCGCTC 1 cut(s) 233
BsrDI GCAATG 1 cut(s) 85
BsrI ACTGG 4 cut(s) 515, 539, 1086, 1408
BssECI CCNNGG 2 cut(s) 868, 1287
BssMI GATC 8 cut(s) 349, 438, 661, 667, 757, 990, 1112, 1489
BssT1I CCWWGG 2 cut(s) 868, 1287
Bst4CI ACNGT 6 cut(s) 716, 742, 888, 955, 1037, 1123
Bst6I CTCTTC 1 cut(s) 981
BstC8I GCNNGC 2 cut(s) 531, 688
BstDEI CTNAG 8 cut(s) 246, 299, 552, 807, 859, 1065, 1106, 1133
BstDSI CCRYGG 1 cut(s) 1287
BstENI CCTNNNNNAGG 1 cut(s) 461
BstF5I GGATG 2 cut(s) 633, 1096
BstHHI GCGC 1 cut(s) 17
BstKTI GATC 8 cut(s) 352, 441, 664, 670, 760, 993, 1115, 1492
BstMAI GTCTC 1 cut(s) 302
BstMBI GATC 8 cut(s) 349, 438, 661, 667, 757, 990, 1112, 1489
BstMWI GCNNNNNNNGC 6 cut(s) 14, 35, 182, 239, 415, 530
BstSCI CCNGG 1 cut(s) 386
BstSFI CTRYAG 1 cut(s) 712
BstSLI GKGCMC 1 cut(s) 1019
BstV1I GCAGC 5 cut(s) 301, 520, 1414, 1459, 1462
BstX2I RGATCY 1 cut(s) 661
BstYI RGATCY 1 cut(s) 661
BsuRI GGCC 6 cut(s) 609, 805, 978, 1057, 1131, 1145
BtgI CCRYGG 1 cut(s) 1287
BtsCI GGATG 2 cut(s) 633, 1096
BtsIMutI CAGTG 5 cut(s) 119, 893, 960, 1042, 1079
Cac8I GCNNGC 2 cut(s) 531, 688
CfoI GCGC 1 cut(s) 17
Cfr13I GGNCC 4 cut(s) 608, 766, 976, 1056
Csp6I GTAC 1 cut(s) 1069
CspCI CAANNNNNGTGG 2 cut(s) 1108, 1143
CviAII CATG 4 cut(s) 470, 850, 1210, 1288
CviQI GTAC 1 cut(s) 1069
DdeI CTNAG 8 cut(s) 246, 299, 552, 807, 859, 1065, 1106, 1133
DpnI GATC 8 cut(s) 351, 440, 663, 669, 759, 992, 1114, 1491
DpnII GATC 8 cut(s) 349, 438, 661, 667, 757, 990, 1112, 1489
Eam1104I CTCTTC 1 cut(s) 981
EarI CTCTTC 1 cut(s) 981
Eco130I CCWWGG 2 cut(s) 868, 1287
Eco147I AGGCCT 1 cut(s) 805
Eco31I GGTCTC 1 cut(s) 302
Eco47I GGWCC 1 cut(s) 766
Eco57I CTGAAG 1 cut(s) 143
EcoNI CCTNNNNNAGG 1 cut(s) 461
EcoO109I RGGNCCY 1 cut(s) 766
EcoT14I CCWWGG 2 cut(s) 868, 1287
ErhI CCWWGG 2 cut(s) 868, 1287
FaeI CATG 4 cut(s) 473, 853, 1213, 1291
FaqI GGGAC 1 cut(s) 752
FatI CATG 4 cut(s) 469, 849, 1209, 1287
FauI CCCGC 1 cut(s) 238
FbaI TGATCA 2 cut(s) 349, 667
Fnu4HI GCNGC 6 cut(s) 243, 315, 534, 1428, 1473, 1476
FokI GGATG 2 cut(s) 620, 1103
Fsp4HI GCNGC 6 cut(s) 243, 315, 534, 1428, 1473, 1476
FspBI CTAG 5 cut(s) 363, 395, 461, 591, 869
GlaI GCGC 1 cut(s) 16
GluI GCNGC 6 cut(s) 243, 315, 534, 1428, 1473, 1476
GsaI CCCAGC 2 cut(s) 614, 618
HaeIII GGCC 6 cut(s) 609, 805, 978, 1057, 1131, 1145
HapII CCGG 2 cut(s) 66, 388
HhaI GCGC 1 cut(s) 17
Hin1II CATG 4 cut(s) 473, 853, 1213, 1291
Hin6I GCGC 1 cut(s) 15
HinP1I GCGC 1 cut(s) 15
HincII GTYRAC 2 cut(s) 105, 565
HindII GTYRAC 2 cut(s) 105, 565
HindIII AAGCTT 2 cut(s) 94, 499
HinfI GANTC 5 cut(s) 89, 188, 452, 819, 855
HpaII CCGG 2 cut(s) 66, 388
HphI GGTGA 3 cut(s) 344, 955, 1496
Hpy166II GTNNAC 3 cut(s) 105, 565, 877
Hpy188I TCNGA 5 cut(s) 337, 438, 778, 985, 1306
Hpy188III TCNNGA 6 cut(s) 283, 461, 506, 591, 665, 1493
Hpy8I GTNNAC 3 cut(s) 105, 565, 877
HpyAV CCTTC 6 cut(s) 63, 194, 467, 934, 1173, 1372
HpyCH4III ACNGT 6 cut(s) 716, 742, 888, 955, 1037, 1123
HpyCH4IV ACGT 2 cut(s) 107, 1503
HpyCH4V TGCA 5 cut(s) 78, 512, 536, 686, 1370
HpyF10VI GCNNNNNNNGC 6 cut(s) 14, 35, 182, 239, 415, 530
HpyF3I CTNAG 8 cut(s) 246, 299, 552, 807, 859, 1065, 1106, 1133
HpySE526I ACGT 2 cut(s) 107, 1503
Hsp92II CATG 4 cut(s) 473, 853, 1213, 1291
HspAI GCGC 1 cut(s) 15
KflI GGGWCCC 1 cut(s) 766
Ksp22I TGATCA 2 cut(s) 349, 667
Kzo9I GATC 8 cut(s) 349, 438, 661, 667, 757, 990, 1112, 1489
LmnI GCTCC 5 cut(s) 337, 406, 466, 627, 1226
Lsp1109I GCAGC 5 cut(s) 301, 520, 1414, 1459, 1462
LweI GCATC 2 cut(s) 499, 1251
MaeI CTAG 5 cut(s) 363, 395, 461, 591, 869
MaeII ACGT 2 cut(s) 107, 1503
MaeIII GTNAC 5 cut(s) 1031, 1050, 1159, 1395, 1484
MalI GATC 8 cut(s) 351, 440, 663, 669, 759, 992, 1114, 1491
MbiI CCGCTC 1 cut(s) 233
MboI GATC 8 cut(s) 349, 438, 661, 667, 757, 990, 1112, 1489
MboII GAAGA 4 cut(s) 266, 298, 998, 1094
MfeI CAATTG 1 cut(s) 309
MflI RGATCY 1 cut(s) 661
MhlI GDGCHC 1 cut(s) 1019
MluCI AATT 5 cut(s) 309, 474, 1200, 1316, 1458
MlyI GAGTC 1 cut(s) 182
MmeI TCCRAC 1 cut(s) 315
MroXI GAANNNNTTC 3 cut(s) 8, 456, 501
MseI TTAA 8 cut(s) 215, 519, 546, 569, 798, 1314, 1356, 1449
MspA1I CMGCKG 4 cut(s) 533, 614, 811, 1064
MspI CCGG 2 cut(s) 66, 388
MspR9I CCNGG 1 cut(s) 388
MunI CAATTG 1 cut(s) 309
Mva1269I GAATGC 1 cut(s) 8
MwoI GCNNNNNNNGC 6 cut(s) 14, 35, 182, 239, 415, 530
NciI CCSGG 1 cut(s) 388
NcoI CCATGG 1 cut(s) 1287
NdeII GATC 8 cut(s) 349, 438, 661, 667, 757, 990, 1112, 1489
NlaIII CATG 4 cut(s) 473, 853, 1213, 1291
NlaIV GGNNCC 4 cut(s) 767, 768, 1016, 1207
NmuCI GTSAC 2 cut(s) 1159, 1484
PceI AGGCCT 1 cut(s) 805
PcsI WCGNNNNNNNCGW 1 cut(s) 1016
PctI GAATGC 1 cut(s) 8
PdmI GAANNNNTTC 3 cut(s) 8, 456, 501
PfeI GAWTC 4 cut(s) 89, 452, 819, 855
PkrI GCNGC 6 cut(s) 244, 316, 535, 1429, 1474, 1477
PleI GAGTC 1 cut(s) 182
PpsI GAGTC 1 cut(s) 182
PpuMI RGGWCCY 1 cut(s) 766
PsiI TTATAA 1 cut(s) 1028
Psp5II RGGWCCY 1 cut(s) 766
PspFI CCCAGC 2 cut(s) 610, 614
PspN4I GGNNCC 4 cut(s) 767, 768, 1016, 1207
PspPI GGNCC 4 cut(s) 608, 766, 976, 1056
PspPPI RGGWCCY 1 cut(s) 766
PsuI RGATCY 1 cut(s) 661
PvuII CAGCTG 4 cut(s) 533, 614, 811, 1064
RsaI GTAC 1 cut(s) 1070
RsaNI GTAC 1 cut(s) 1069
SaqAI TTAA 8 cut(s) 215, 519, 546, 569, 798, 1314, 1356, 1449
SatI GCNGC 6 cut(s) 243, 315, 534, 1428, 1473, 1476
Sau3AI GATC 8 cut(s) 349, 438, 661, 667, 757, 990, 1112, 1489
Sau96I GGNCC 4 cut(s) 608, 766, 976, 1056
ScaI AGTACT 1 cut(s) 1070
SchI GAGTC 1 cut(s) 182
ScrFI CCNGG 1 cut(s) 388
SduI GDGCHC 1 cut(s) 1019
SfaNI GCATC 2 cut(s) 499, 1251
SfcI CTRYAG 1 cut(s) 712
SinI GGWCC 1 cut(s) 766
SmlI CTYRAG 1 cut(s) 419
SmoI CTYRAG 1 cut(s) 419
Sse9I AATT 5 cut(s) 309, 474, 1200, 1316, 1458
SseBI AGGCCT 1 cut(s) 805
SsiI CCGC 5 cut(s) 185, 231, 242, 816, 907
SspI AATATT 1 cut(s) 838
SspMI CTAG 5 cut(s) 363, 395, 461, 591, 869
StuI AGGCCT 1 cut(s) 805
StyD4I CCNGG 1 cut(s) 386
StyI CCWWGG 2 cut(s) 868, 1287
TaaI ACNGT 6 cut(s) 716, 742, 888, 955, 1037, 1123
TaiI ACGT 2 cut(s) 110, 1506
TaqI TCGA 3 cut(s) 744, 1041, 1111
TasI AATT 5 cut(s) 309, 474, 1200, 1316, 1458
TatI WGTACW 1 cut(s) 1068
TauI GCSGC 1 cut(s) 245
TfiI GAWTC 4 cut(s) 89, 452, 819, 855
Tru1I TTAA 8 cut(s) 215, 519, 546, 569, 798, 1314, 1356, 1449
Tru9I TTAA 8 cut(s) 215, 519, 546, 569, 798, 1314, 1356, 1449
TscAI CASTG 5 cut(s) 126, 893, 960, 1042, 1086
TseFI GTSAC 2 cut(s) 1159, 1484
TseI GCWGC 5 cut(s) 314, 533, 1427, 1472, 1475
Tsp45I GTSAC 2 cut(s) 1159, 1484
TspDTI ATGAA 7 cut(s) 17, 334, 359, 368, 846, 984, 1391
TspRI CASTG 5 cut(s) 126, 893, 960, 1042, 1086
VpaK11BI GGWCC 1 cut(s) 766
XagI CCTNNNNNAGG 1 cut(s) 461
XapI RAATTY 2 cut(s) 474, 1316
XbaI TCTAGA 2 cut(s) 460, 590
XmaJI CCTAGG 1 cut(s) 868
XmnI GAANNNNTTC 3 cut(s) 8, 456, 501
XspI CTAG 5 cut(s) 363, 395, 461, 591, 869
ZrmI AGTACT 1 cut(s) 1070
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.