Rh2BG672400
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
88374094 .. 88376371
2278 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG672400.1

Sequence Viewer

Length: 1512 bp
ATGAAAGCTTTCTGCGCCATACGGTTCGCCGACTTTGCTTCTCCTCTGCAAGTCTTATTCAGCACCGGAAGGTGTTGCAATGTGAATGATTCAAGCTTCAAGTTGACGTATCACTACCCACTGAAGTTTGTGAGGACGAGAGTTGCTTTCCCTCAAAAGCTCTTTATCTGTCGGGCGAGGTTTGACTCTGGGGTGGAAGGGTCATTTAGCTTAAAGCTGGTATCTCCAGCTCTTTTAGCGGCTGAGAAAGAAGAAGCCAAAGCTGTCCTAACCTTGTTCTTGAAGAAACAAGGTCTCAGCCATACAATTGCTGCGAGAACCATAAACAAGTCGGAGCTTTTCATTGATCAACTTGTCGCTAGGCTTCATTCTGTTCATAAATCCCGGTATCTAGTAGGACGGGAGCTAACCACTCTTGAGATAAGGGAGGCTCTGATCCCTTACCTTGAATCCCTTCTAGAGGAGCATGGAATTTATATGGTAGATGTGGTGGAAAGCTTTCCAGATGCACCAGTTAAAGCAAAGCCAGCTGCACCAGTTATTAAATCTCAGTCATCTGTTGACTTAAAGAAGTTGAGAGCCATATCTAGAGTAAGTGAGATAGGCCCAGCTGGGAAGCTCCCACCTCACATCCTATACCTTTTAGAGCTTGGAATGGATCTTGATCAAATAAAGGGTATTGCACGCAGATTTCCATCTTTTGCCTACTACAGTTTGGAGGGAAAAATAAAACCAACTGTCGAGTTTCTCCTTGATCTTGGGGTCCCAAAATCTGATATTCCTACAATCCTCTTTAAGAGGCCTCAGCTGTGCGGAATCAGTCTTTATGAAAATATTATGCCCACCATGAGATTCTTAGAAAACCTAGGTGTGGACAAGAAACAGTGGGCAAAAGTGATATACCGCTTTCCAGCCCTCCTCACATATAGTAGGCAGAAGGTGAAAACAACAGTGGATTTCCTCTATGAAATGGGCCTTTCAGAAGAGAGCATAGGTAAGGTTTTGACGAGGTGCCCAAACATTATAAGTTACAGTGTCGAGGAGAAGTTACGGCCCACAGCTGAGTACTTTTGCTCACTGGGGGTGGATGTTGGTGTTCTTCTAAGTCGATCTCCCACAGTTTTTGGCCTTAGTATTGAGGCCAACTTGAGGCCTGTGACAGAGTTTTTCTATGGAAAGGGATATACTATGGAGGAAATTGGAACCATGATTTCTAGGTATGGAGCTTTATATACTTTCAGCTTGACAGAGAACTTGATGCCGAAATGGGAGTTCTTTTTGACCATGGATTATTCAAAATCAGAGCTGGTTAAATTCCCTCAATACTTTGGTTATAGTTTGGTAGAAAGGATTAAACCAAGATATGCACTTATGAAGGAATGTGGAGTGATGTTACTATTGAACCAGTTGTTATCACTATCGGCTGCTAACTTTGATAAGGCTCTTAAAAAGAAAATTGAGAAAGTGGCTGCTGCCAATGGTGACGATCCTGACACAGACGTTGAAATATGA

Protein Analysis

503

Amino Acids

56.81

Weight (kDa)

9.02

Isoelectric Point (pI)

39.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 75 - 323 1.3e-21 mTERF
mTERF PF02536 312 - 478 5.5e-30 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012380)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1025
AccB1I GGYRCC 1 cut(s) 1011
AciI CCGC 3 cut(s) 239, 813, 904
AclWI GGATC 3 cut(s) 430, 666, 1481
AcsI RAATTY 2 cut(s) 471, 1313
AcuI CTGAAG 1 cut(s) 143
AfaI GTAC 1 cut(s) 1067
AfiI CCNNNNNNNGG 3 cut(s) 460, 871, 1149
AgsI TTSAA 7 cut(s) 93, 100, 283, 449, 1296, 1402, 1505
Alw26I GTCTC 1 cut(s) 299
AlwI GGATC 3 cut(s) 430, 666, 1481
AoxI GGCC 7 cut(s) 604, 800, 973, 1052, 1126, 1140, 1151
ApeKI GCWGC 5 cut(s) 311, 530, 1424, 1469, 1472
ApoI RAATTY 2 cut(s) 471, 1313
Asp700I GAANNNNTTC 3 cut(s) 8, 453, 498
AspA2I CCTAGG 1 cut(s) 865
AspLEI GCGC 1 cut(s) 17
AspS9I GGNCC 4 cut(s) 605, 763, 973, 1053
AsuC2I CCSGG 1 cut(s) 385
AsuHPI GGTGA 2 cut(s) 952, 1493
AvaII GGWCC 1 cut(s) 763
AvrII CCTAGG 1 cut(s) 865
BaeGI GKGCMC 1 cut(s) 1016
BanI GGYRCC 1 cut(s) 1011
BbvCI CCTCAGC 1 cut(s) 804
BbvI GCAGC 5 cut(s) 298, 517, 1411, 1456, 1459
BccI CCATC 1 cut(s) 703
BceAI ACGGC 1 cut(s) 1067
BclI TGATCA 2 cut(s) 346, 664
BcnI CCSGG 1 cut(s) 385
BcoDI GTCTC 1 cut(s) 299
BfaI CTAG 6 cut(s) 360, 392, 458, 588, 866, 1215
BfmI CTRYAG 1 cut(s) 709
BisI GCNGC 6 cut(s) 240, 312, 531, 1425, 1470, 1473
BlnI CCTAGG 1 cut(s) 865
BlsI GCNGC 6 cut(s) 241, 313, 532, 1426, 1471, 1474
BmcAI AGTACT 1 cut(s) 1067
Bme1390I CCNGG 1 cut(s) 385
Bme18I GGWCC 1 cut(s) 763
BmgT120I GGNCC 4 cut(s) 605, 763, 973, 1053
BmiI GGNNCC 4 cut(s) 764, 765, 1013, 1204
BmrFI CCNGG 1 cut(s) 385
BmrI ACTGGG 1 cut(s) 1088
BmsI GCATC 2 cut(s) 496, 1248
BmuI ACTGGG 1 cut(s) 1088
BpmI CTGGAG 1 cut(s) 210
Bpu10I CCTNAGC 1 cut(s) 804
BpuEI CTTGAG 2 cut(s) 437, 1168
BpuMI CCSGG 1 cut(s) 385
BsaBI GATNNNNATC 2 cut(s) 663, 694
BsaI GGTCTC 1 cut(s) 299
BsaJI CCNNGG 2 cut(s) 865, 1284
BsaWI WCCGGW 1 cut(s) 65
Bsc4I CCNNNNNNNGG 3 cut(s) 460, 871, 1149
Bse1I ACTGG 4 cut(s) 512, 536, 1083, 1405
Bse3DI GCAATG 1 cut(s) 85
Bse8I GATNNNNATC 2 cut(s) 663, 694
BseDI CCNNGG 2 cut(s) 865, 1284
BseGI GGATG 2 cut(s) 630, 1093
BseJI GATNNNNATC 2 cut(s) 663, 694
BseLI CCNNNNNNNGG 3 cut(s) 460, 871, 1149
BseMI GCAATG 1 cut(s) 85
BseMII CTCAG 5 cut(s) 234, 310, 563, 818, 1053
BseNI ACTGG 4 cut(s) 512, 536, 1083, 1405
BseRI GAGGAG 4 cut(s) 33, 476, 908, 1055
BseSI GKGCMC 1 cut(s) 1016
BseXI GCAGC 5 cut(s) 298, 517, 1411, 1456, 1459
BseYI CCCAGC 2 cut(s) 607, 611
BsgI GTGCAG 1 cut(s) 516
BshFI GGCC 7 cut(s) 606, 802, 975, 1054, 1128, 1142, 1153
BshNI GGYRCC 1 cut(s) 1011
BsiSI CCGG 2 cut(s) 66, 385
BslFI GGGAC 1 cut(s) 749
BslI CCNNNNNNNGG 3 cut(s) 460, 871, 1149
BsmAI GTCTC 1 cut(s) 299
BsmFI GGGAC 1 cut(s) 749
BsnI GGCC 7 cut(s) 606, 802, 975, 1054, 1128, 1142, 1153
Bso31I GGTCTC 1 cut(s) 299
Bsp1286I GDGCHC 1 cut(s) 1016
Bsp143I GATC 7 cut(s) 346, 435, 658, 664, 754, 1109, 1486
Bsp19I CCATGG 1 cut(s) 1284
BspACI CCGC 3 cut(s) 239, 813, 904
BspANI GGCC 7 cut(s) 606, 802, 975, 1054, 1128, 1142, 1153
BspCNI CTCAG 5 cut(s) 235, 309, 562, 817, 1054
BspLI GGNNCC 4 cut(s) 764, 765, 1013, 1204
BspPI GGATC 3 cut(s) 430, 666, 1481
BspT107I GGYRCC 1 cut(s) 1011
BspTNI GGTCTC 1 cut(s) 299
BsrDI GCAATG 1 cut(s) 85
BsrI ACTGG 4 cut(s) 512, 536, 1083, 1405
BssECI CCNNGG 2 cut(s) 865, 1284
BssMI GATC 7 cut(s) 346, 435, 658, 664, 754, 1109, 1486
BssT1I CCWWGG 2 cut(s) 865, 1284
Bst4CI ACNGT 7 cut(s) 24, 713, 739, 885, 952, 1034, 1120
Bst6I CTCTTC 1 cut(s) 978
BstC8I GCNNGC 2 cut(s) 528, 685
BstDEI CTNAG 8 cut(s) 243, 296, 549, 804, 856, 1062, 1103, 1130
BstDSI CCRYGG 1 cut(s) 1284
BstENI CCTNNNNNAGG 1 cut(s) 458
BstF5I GGATG 2 cut(s) 630, 1093
BstHHI GCGC 1 cut(s) 17
BstKTI GATC 7 cut(s) 349, 438, 661, 667, 757, 1112, 1489
BstMAI GTCTC 1 cut(s) 299
BstMBI GATC 7 cut(s) 346, 435, 658, 664, 754, 1109, 1486
BstMWI GCNNNNNNNGC 4 cut(s) 14, 35, 236, 527
BstSCI CCNGG 1 cut(s) 383
BstSFI CTRYAG 1 cut(s) 709
BstSLI GKGCMC 1 cut(s) 1016
BstV1I GCAGC 5 cut(s) 298, 517, 1411, 1456, 1459
BstX2I RGATCY 1 cut(s) 658
BstYI RGATCY 1 cut(s) 658
BsuRI GGCC 7 cut(s) 606, 802, 975, 1054, 1128, 1142, 1153
BtgI CCRYGG 1 cut(s) 1284
BtsCI GGATG 2 cut(s) 630, 1093
BtsIMutI CAGTG 5 cut(s) 119, 890, 957, 1039, 1076
Cac8I GCNNGC 2 cut(s) 528, 685
CfoI GCGC 1 cut(s) 17
Cfr13I GGNCC 4 cut(s) 605, 763, 973, 1053
Csp6I GTAC 1 cut(s) 1066
CspCI CAANNNNNGTGG 2 cut(s) 1105, 1140
CviAII CATG 4 cut(s) 467, 847, 1207, 1285
CviQI GTAC 1 cut(s) 1066
DdeI CTNAG 8 cut(s) 243, 296, 549, 804, 856, 1062, 1103, 1130
DpnI GATC 7 cut(s) 348, 437, 660, 666, 756, 1111, 1488
DpnII GATC 7 cut(s) 346, 435, 658, 664, 754, 1109, 1486
Eam1104I CTCTTC 1 cut(s) 978
EarI CTCTTC 1 cut(s) 978
Eco130I CCWWGG 2 cut(s) 865, 1284
Eco147I AGGCCT 2 cut(s) 802, 1153
Eco31I GGTCTC 1 cut(s) 299
Eco47I GGWCC 1 cut(s) 763
Eco57I CTGAAG 1 cut(s) 143
EcoNI CCTNNNNNAGG 1 cut(s) 458
EcoO109I RGGNCCY 1 cut(s) 763
EcoT14I CCWWGG 2 cut(s) 865, 1284
ErhI CCWWGG 2 cut(s) 865, 1284
FaeI CATG 4 cut(s) 470, 850, 1210, 1288
FaqI GGGAC 1 cut(s) 749
FatI CATG 4 cut(s) 466, 846, 1206, 1284
FbaI TGATCA 2 cut(s) 346, 664
Fnu4HI GCNGC 6 cut(s) 240, 312, 531, 1425, 1470, 1473
FokI GGATG 2 cut(s) 617, 1100
Fsp4HI GCNGC 6 cut(s) 240, 312, 531, 1425, 1470, 1473
FspBI CTAG 6 cut(s) 360, 392, 458, 588, 866, 1215
GlaI GCGC 1 cut(s) 16
GluI GCNGC 6 cut(s) 240, 312, 531, 1425, 1470, 1473
GsaI CCCAGC 2 cut(s) 611, 615
GsuI CTGGAG 1 cut(s) 210
HaeIII GGCC 7 cut(s) 606, 802, 975, 1054, 1128, 1142, 1153
HapII CCGG 2 cut(s) 66, 385
HhaI GCGC 1 cut(s) 17
Hin1II CATG 4 cut(s) 470, 850, 1210, 1288
Hin6I GCGC 1 cut(s) 15
HinP1I GCGC 1 cut(s) 15
HincII GTYRAC 2 cut(s) 105, 562
HindII GTYRAC 2 cut(s) 105, 562
HindIII AAGCTT 3 cut(s) 6, 94, 496
HinfI GANTC 5 cut(s) 89, 185, 449, 816, 852
HpaII CCGG 2 cut(s) 66, 385
HphI GGTGA 2 cut(s) 952, 1493
Hpy166II GTNNAC 3 cut(s) 105, 562, 874
Hpy188I TCNGA 5 cut(s) 334, 435, 775, 982, 1303
Hpy188III TCNNGA 7 cut(s) 280, 416, 458, 503, 588, 662, 1490
Hpy8I GTNNAC 3 cut(s) 105, 562, 874
HpyAV CCTTC 5 cut(s) 63, 191, 464, 931, 1369
HpyCH4III ACNGT 7 cut(s) 24, 713, 739, 885, 952, 1034, 1120
HpyCH4IV ACGT 2 cut(s) 107, 1500
HpyCH4V TGCA 6 cut(s) 49, 78, 509, 533, 683, 1367
HpyF10VI GCNNNNNNNGC 4 cut(s) 14, 35, 236, 527
HpyF3I CTNAG 8 cut(s) 243, 296, 549, 804, 856, 1062, 1103, 1130
HpySE526I ACGT 2 cut(s) 107, 1500
Hsp92II CATG 4 cut(s) 470, 850, 1210, 1288
HspAI GCGC 1 cut(s) 15
KflI GGGWCCC 1 cut(s) 763
Ksp22I TGATCA 2 cut(s) 346, 664
Kzo9I GATC 7 cut(s) 346, 435, 658, 664, 754, 1109, 1486
LmnI GCTCC 5 cut(s) 334, 403, 463, 624, 1223
Lsp1109I GCAGC 5 cut(s) 298, 517, 1411, 1456, 1459
LweI GCATC 2 cut(s) 496, 1248
MaeI CTAG 6 cut(s) 360, 392, 458, 588, 866, 1215
MaeII ACGT 2 cut(s) 107, 1500
MaeIII GTNAC 5 cut(s) 1028, 1047, 1156, 1392, 1481
MalI GATC 7 cut(s) 348, 437, 660, 666, 756, 1111, 1488
MboI GATC 7 cut(s) 346, 435, 658, 664, 754, 1109, 1486
MboII GAAGA 4 cut(s) 263, 295, 995, 1091
MfeI CAATTG 1 cut(s) 306
MflI RGATCY 1 cut(s) 658
MhlI GDGCHC 1 cut(s) 1016
MluCI AATT 5 cut(s) 306, 471, 1197, 1313, 1455
MlyI GAGTC 1 cut(s) 179
MmeI TCCRAC 1 cut(s) 312
MroXI GAANNNNTTC 3 cut(s) 8, 453, 498
MseI TTAA 8 cut(s) 212, 516, 543, 566, 795, 1311, 1353, 1446
MspA1I CMGCKG 4 cut(s) 530, 611, 808, 1061
MspI CCGG 2 cut(s) 66, 385
MspR9I CCNGG 1 cut(s) 385
MunI CAATTG 1 cut(s) 306
MwoI GCNNNNNNNGC 4 cut(s) 14, 35, 236, 527
NciI CCSGG 1 cut(s) 385
NcoI CCATGG 1 cut(s) 1284
NdeII GATC 7 cut(s) 346, 435, 658, 664, 754, 1109, 1486
NlaIII CATG 4 cut(s) 470, 850, 1210, 1288
NlaIV GGNNCC 4 cut(s) 764, 765, 1013, 1204
NmuCI GTSAC 2 cut(s) 1156, 1481
PceI AGGCCT 2 cut(s) 802, 1153
PdmI GAANNNNTTC 3 cut(s) 8, 453, 498
PfeI GAWTC 4 cut(s) 89, 449, 816, 852
PkrI GCNGC 6 cut(s) 241, 313, 532, 1426, 1471, 1474
PleI GAGTC 1 cut(s) 179
PpsI GAGTC 1 cut(s) 179
PpuMI RGGWCCY 1 cut(s) 763
PsiI TTATAA 1 cut(s) 1025
Psp5II RGGWCCY 1 cut(s) 763
PspFI CCCAGC 2 cut(s) 607, 611
PspN4I GGNNCC 4 cut(s) 764, 765, 1013, 1204
PspPI GGNCC 4 cut(s) 605, 763, 973, 1053
PspPPI RGGWCCY 1 cut(s) 763
PsuI RGATCY 1 cut(s) 658
PvuII CAGCTG 4 cut(s) 530, 611, 808, 1061
RsaI GTAC 1 cut(s) 1067
RsaNI GTAC 1 cut(s) 1066
SaqAI TTAA 8 cut(s) 212, 516, 543, 566, 795, 1311, 1353, 1446
SatI GCNGC 6 cut(s) 240, 312, 531, 1425, 1470, 1473
Sau3AI GATC 7 cut(s) 346, 435, 658, 664, 754, 1109, 1486
Sau96I GGNCC 4 cut(s) 605, 763, 973, 1053
ScaI AGTACT 1 cut(s) 1067
SchI GAGTC 1 cut(s) 179
ScrFI CCNGG 1 cut(s) 385
SduI GDGCHC 1 cut(s) 1016
SfaNI GCATC 2 cut(s) 496, 1248
SfcI CTRYAG 1 cut(s) 709
SinI GGWCC 1 cut(s) 763
SmlI CTYRAG 2 cut(s) 416, 1147
SmoI CTYRAG 2 cut(s) 416, 1147
Sse9I AATT 5 cut(s) 306, 471, 1197, 1313, 1455
SseBI AGGCCT 2 cut(s) 802, 1153
SsiI CCGC 3 cut(s) 239, 813, 904
SspI AATATT 1 cut(s) 835
SspMI CTAG 6 cut(s) 360, 392, 458, 588, 866, 1215
StuI AGGCCT 2 cut(s) 802, 1153
StyD4I CCNGG 1 cut(s) 383
StyI CCWWGG 2 cut(s) 865, 1284
TaaI ACNGT 7 cut(s) 24, 713, 739, 885, 952, 1034, 1120
TaiI ACGT 2 cut(s) 110, 1503
TaqI TCGA 3 cut(s) 741, 1038, 1108
TasI AATT 5 cut(s) 306, 471, 1197, 1313, 1455
TatI WGTACW 1 cut(s) 1065
TauI GCSGC 1 cut(s) 242
TfiI GAWTC 4 cut(s) 89, 449, 816, 852
Tru1I TTAA 8 cut(s) 212, 516, 543, 566, 795, 1311, 1353, 1446
Tru9I TTAA 8 cut(s) 212, 516, 543, 566, 795, 1311, 1353, 1446
TscAI CASTG 5 cut(s) 126, 890, 957, 1039, 1083
TseFI GTSAC 2 cut(s) 1156, 1481
TseI GCWGC 5 cut(s) 311, 530, 1424, 1469, 1472
Tsp45I GTSAC 2 cut(s) 1156, 1481
TspDTI ATGAA 7 cut(s) 17, 331, 356, 365, 843, 981, 1388
TspRI CASTG 5 cut(s) 126, 890, 957, 1039, 1083
VpaK11BI GGWCC 1 cut(s) 763
XagI CCTNNNNNAGG 1 cut(s) 458
XapI RAATTY 2 cut(s) 471, 1313
XbaI TCTAGA 2 cut(s) 457, 587
XmaJI CCTAGG 1 cut(s) 865
XmnI GAANNNNTTC 3 cut(s) 8, 453, 498
XspI CTAG 6 cut(s) 360, 392, 458, 588, 866, 1215
ZrmI AGTACT 1 cut(s) 1067
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.