Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0009766

Physical Location & Seq

Genomic Coordinates Reverse (-)

39669864 .. 39677248

Gene Structure 7385 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g54280.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3000 bp

ATGGCGTCGGCGTTGCTGTTGCTGGTAGTGTTACTGGCGGGGTTGCTGGCCGCACAATCGGAGTATATAGCTTACAATACGACGGCGGGGATCGTCCCGGAGAAACTCAATGTTCATCTGGTTCCTCACTCTCACGATGACGTCGGCTGGCTTAAGACGGTGGACCAGTACTACGTCGGCGCCAACAATTCAATTCGCGGTGCTTGCGTACAGAACGTCATTGACTCCGTCATCTCTTCCTTACTGGAGGACAAGAATCGCAAGTTCATATATGTGGAGATTGCTTTCTTTCAGAGATGGTGGCGCCAGCAGAGCCCTGCTTTGAAGATTAAAGTCAAGGAACTGGTCAGCTCTGGTCAACTCGAATTCATAAATGGAGGGATGTGTATGCACGACGAGGCAACCGCGCATTACATTGATTTGATTGATCAGACTACTCTGGGCCATCAATTTATACTGAAAGAGTTTGGTCAGACTCCTCGAGTCGGCTGGCAGATTGATCCTTTCGGCCACTCGGCTGTTCAAGCATACTTGCTTGGTGCTGAGTTAGGTTTCGATTCCCTCTTTTTTGCTCGAATTGATTACCAAGATAGAGCTGTCCGACTCAGGGATAAGACTCTTGAGGTTATATGGCAGGGTTGTAAGTCCCTTGCTTCGTCTTCACAGATTTTCACTGGCATATTCCCCAAGCACTATGATCCTCCTGATGGTTTCGTATTTGAAATAAATGATGTGTCACCTCCTATTCAGGATGACATTCTCCTGTTTGACTACAATGTTCAAGAGCGAGTCAATAACTTTGTTGCAGCAGCTTTAGCTCAGGCTAATGTGACAAGAACAAATCACATTATGTGGCTAATGGGGACAGATTTTCGCTACCAATATGCAAATTCATGGTTCAGGCAGATGGACAAATTTATTCATTACGTCAACCAGGATGCGCGTGTCAATGCATTTTATTCAACTCCATCAATCTACACTGACGCAAAATATGCAGCAGATGAGCAATGGCCTCTGAAAACTGATGATTTCTTTCCTTATGCGGATCATCCAAATGCATATTGGACTGGTTATTTTACAAGTCGTCCGGCCTTTAAAGGTTATGTCCGAATTTTGAGTGGTTACTATCTGGCAGCGAGGCAGTTGGAATTCTTCAAAGGTAGGAGTGATTCTGGACCAAATACTGATGCATTAGCTGATGCCTTGGCTATTGTTCAACATCATGATGCAGTTAGTGGTACACAAAGACAGCATGTTGCTGCTGATTATGCAATGCGATTGTCAATAGGTTATTTGGAGGCTGAAAAGGTGGTTGCCTCTTCTCTTGCTTACCTTTCTGATTCAGAACCAAGTTCTGGACAGAAGCGCACAGCCACCAAATTTGAACAGTGCCCTCTTCTAAACATCAGCTATTGTCCTCCATCAGAAGCTGCCTTATCCGATGGGAAAAGCTTGGTTGTTGTTATCTACAATCCTCTTGGTTGGAAGAGAGAGGAAGTAATACGGATCCCTGTTTCATATGAAAGTGTCACTGTTCAAGACTCTACCCAAAGAAAAATTGAAGCTCAGCTTTTACCTCTCTCAAATGCAACTTTGAAATTAAGAAGTTACTATGTCGGAGCACATTTAGGCAATACCCCAAGTGAACCACCCAAGTATTGGCTAGCTTTTTCAGTAACGGTACCACCACTTGGTTTCAGCTCTTATGTTATCTCAAGTGCAAAACAGACAGATAAAGATCGAAGCTCAACTGTCTCCACAGTATACACATCAGAAGGAAATACAAATAAGACCATAGAAGTTGGGCAAGGGAGTTTAAAACTACTTTATTCTGCAGATGAAGGAAAACTTGCTCGTTATATTAACAGCAGATATAAGGTTACGGCAGTTGCTGAACAATCATATAGTTATTACACTGGAAACGATGGAACTGACAAAGATCCTCAGGCCTCTGGGGCATATGTATTTCGACCAAATAACACAGTTGTTATAAAATCTGAAGAAAAGGTTTCTCTCACTCTGATGCGAGGCCCAGTGTTGGATGAAGTGCATCAGCAGATTAATCAATGGGTGTCTCAGATTACGAGGTTATACAAAGGAAAAGAGCATGCTGAAGTAGAGTTCACTATTGGGCCTATACCCGTGGATGATGGTTTTGGAAAAGAAATCACAACTCAATTTACAACAGCCATGAAGACCAATAAGACCTTCTACACGGATTCTAATGGTCGCGACTTCATTAAGCGGGTTCGTGATTTCAGGACAGATTGGGACCTACAAGTGAACCAACCAATTGCGGGAAATTATTACCCGATTAATCTTGGAATTTATGTGCAAGATAGCAGTACAGAACTTTCAGTCTTGGTTGATCGTGCAGTGGGAGGAACTAGCTTAGTAGATGGTCAAGTAGAGCTGATGCTCCACAGGAGGCTAATTCATGACGATATCAGAGGTGTTGGCGAGGTCCAAGGGAAGTTTTATCTCAGAATTGATCCTCTTGGAGAAGGTTCTAAGTGGCGTCGCACAGCTGGCCAAGAGATAAGTGTCCCACTTCTATTGGCCTTTGCCGAACAGGAAGGAAATGATTGGATGAATTCTCATGTACCCACATTTTCTGGAATTGACCCTTCCTATGCGTTACCAGACAATGTTGCTGTGATAACCCTCCAGGAACTGGGAAATGGGAAAGTACTCCTTCGGTTGGCTCACCTATATGAGACTGGCGAGGACAAGGACTATTCTGTGTTGGCAAATGTTGAACTAAAAAAGTTGTTTCCAAGGAAGAAGATAAGCAAAGTGACAGAGACGAGTTTATCTGCCAATCAAGAAAGAGGTGAAATGGAGAAGAAGAGATTAGTTTGGAAAGTGGAAGGGTCCAAAGAGTCTAAGGTGGTGAGGGGAGGCGCTGTTGATCCTGCAAAACTGGTGGTGGAGCTAGCACCGATGGAGATACGCACTTTCCTTATTGACTTGGAGTACCTGCACATATATGGTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0003674 GO:0003824 GO:0004553 GO:0004559 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005774 GO:0005975 GO:0005996 GO:0006013 GO:0006464 GO:0006517 GO:0006807 GO:0008150 GO:0008152 GO:0009100 GO:0009505 GO:0009987 GO:0015923 GO:0016020 GO:0016787 GO:0016798 GO:0019318 GO:0019538 GO:0030312 GO:0031090 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044281 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0071704 GO:0071944 GO:0098588 GO:0098805 GO:1901135 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00511 map00511

Pfam Domains

Protein Families

Alpha-mann_mid Glyco_hydro_38 Glyco_hydro_38C

Protein Analysis

1000

Amino Acids

112.21

Weight (kDa)

5.88

Isoelectric Point (pI)

33.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_38N	PF01074	37 - 348	2.2e-83	Glycosyl hydrolases family 38 N-terminal domain
Alpha-mann_mid	PF09261	353 - 445	7.6e-19	Alpha mannosidase middle domain
Laman-like_dom	PF21260	520 - 571	3.7e-09	Lysosomal alpha-mannosidase-like, central domain
Glyco_hydro_38C	PF07748	603 - 817	1.6e-44	Glycosyl hydrolases family 38 C-terminal domain
Glyco_hydro38C2	PF17677	883 - 987	1.6e-07	Glycosyl hydrolases family 38 C-terminal beta sandwich domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0009766)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26720 AT3G26720 AT3G26720 AT3G26720 AT3G26720
fragaria_vesca	FvH4_6g54280 FvH4_6g54280 FvH4_6g54280 FvH4_6g54280
malus_domestica	MD09G1002800.v1.1
prunus_persica	Prupe.3G313400_v2.0.a1 Prupe.3G313400_v2.0.a1
pyrus_communis	pycom111g00230
rosa_chinensis	RchiOBHm_Chr2g0176491
rosa_laevigata	RLG00000022417
rosa_roxburghii	Rroxscaffold_2G00076340
rosa_rugosa	Rorug02G0595100
rosa_samantha	Rh2AG673400 Rh2BG684700 Rh2DG698300
rosa_wichuraiana	Rw2G055230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1991
AatII	GACGTC	1 cut(s)	144
Acc36I	ACCTGC	1 cut(s)	2988
Acc65I	GGTACC	1 cut(s)	1681
AccB1I	GGYRCC	3 cut(s)	179, 303, 1681
AccB7I	CCANNNNNTGG	4 cut(s)	1355, 1659, 1691, 2674
AccI	GTMKAC	1 cut(s)	1764
AccII	CGCG	4 cut(s)	198, 407, 943, 2232
AciI	CCGC	8 cut(s)	38, 51, 86, 198, 405, 1043, 2245, 2297
AclWI	GGATC	9 cut(s)	98, 494, 692, 1053, 1501, 1514, 1934, 2486, 2906
AcoI	YGGCCR	3 cut(s)	48, 508, 2530
AcsI	RAATTY	8 cut(s)	365, 889, 914, 1110, 1148, 1379, 2325, 2593
AcuI	CTGAAG	2 cut(s)	2019, 2133
AcyI	GRCGYC	5 cut(s)	5, 141, 180, 304, 2518
AfaI	GTAC	8 cut(s)	170, 210, 1240, 1683, 2347, 2604, 2691, 2978
AflII	CTTAAG	1 cut(s)	152
AjnI	CCWGG	2 cut(s)	933, 2667
AjuI	GAANNNNNNNTTGG	2 cut(s)	2192, 2224
Alw21I	GWGCWC	1 cut(s)	1624
Alw26I	GTCTC	4 cut(s)	1759, 2079, 2711, 2798
AlwI	GGATC	9 cut(s)	98, 494, 692, 1053, 1501, 1514, 1934, 2486, 2906
AlwNI	CAGNNNCTG	3 cut(s)	1430, 1892, 2674
Ama87I	CYCGRG	1 cut(s)	480
ApeKI	GCWGC	6 cut(s)	806, 809, 995, 1133, 1259, 1430
ApoI	RAATTY	8 cut(s)	365, 889, 914, 1110, 1148, 1379, 2325, 2593
AseI	ATTAAT	2 cut(s)	2061, 2316
Asp718I	GGTACC	1 cut(s)	1681
AspLEI	GCGC	6 cut(s)	182, 306, 409, 943, 1368, 2906
AspS9I	GGNCC	8 cut(s)	163, 442, 1175, 2030, 2132, 2272, 2464, 2874
AsuC2I	CCSGG	1 cut(s)	98
AsuHPI	GGTGA	4 cut(s)	729, 2699, 2846, 2905
AsuNHI	GCTAGC	2 cut(s)	1663, 2935
AvaI	CYCGRG	1 cut(s)	480
AvaII	GGWCC	5 cut(s)	163, 1175, 2272, 2464, 2874
AxyI	CCTNAGG	1 cut(s)	1944
BaeGI	GKGCMC	1 cut(s)	1394
BalI	TGGCCA	1 cut(s)	2532
BamHI	GGATCC	1 cut(s)	1506
BanI	GGYRCC	3 cut(s)	179, 303, 1681
BanII	GRGCYC	1 cut(s)	317
BbsI	GAAGAC	2 cut(s)	651, 2201
Bbv12I	GWGCWC	1 cut(s)	1624
BbvI	GCAGC	6 cut(s)	818, 821, 1007, 1145, 1246, 1417
BceAI	ACGGC	2 cut(s)	99, 1899
BciT130I	CCWGG	2 cut(s)	935, 2669
BclI	TGATCA	1 cut(s)	427
BcnI	CCSGG	1 cut(s)	98
BcoDI	GTCTC	4 cut(s)	1759, 2079, 2711, 2798
BfaI	CTAG	3 cut(s)	1664, 2388, 2936
BfmI	CTRYAG	1 cut(s)	1833
BfoI	RGCGCY	3 cut(s)	183, 307, 2907
BfrI	CTTAAG	1 cut(s)	152
BfuAI	ACCTGC	1 cut(s)	2988
BglI	GCCNNNNNGGC	1 cut(s)	1955
BisI	GCNGC	7 cut(s)	51, 807, 810, 996, 1134, 1260, 1431
BlpI	GCTNAGC	1 cut(s)	1566
BlsI	GCNGC	7 cut(s)	52, 808, 811, 997, 1135, 1261, 1432
BmcAI	AGTACT	2 cut(s)	170, 2691
Bme1390I	CCNGG	3 cut(s)	98, 935, 2669
Bme18I	GGWCC	5 cut(s)	163, 1175, 2272, 2464, 2874
BmeT110I	CYCGRG	1 cut(s)	480
BmgT120I	GGNCC	8 cut(s)	163, 442, 1175, 2030, 2132, 2272, 2464, 2874
BmiI	GGNNCC	8 cut(s)	123, 181, 305, 1508, 1683, 2273, 2875, 2995
BmrFI	CCNGG	3 cut(s)	98, 935, 2669
BmrI	ACTGGG	2 cut(s)	2027, 2684
BmsI	GCATC	7 cut(s)	928, 1177, 1189, 1216, 2013, 2059, 2406
BmtI	GCTAGC	2 cut(s)	1667, 2939
BmuI	ACTGGG	2 cut(s)	2027, 2684
BpiI	GAAGAC	2 cut(s)	651, 2201
BpmI	CTGGAG	2 cut(s)	266, 2651
Bpu10I	CCTNAGC	1 cut(s)	819
Bpu1102I	GCTNAGC	1 cut(s)	1566
BpuEI	CTTGAG	2 cut(s)	641, 1699
BpuMI	CCSGG	1 cut(s)	98
BsaBI	GATNNNNATC	1 cut(s)	1737
BsaHI	GRCGYC	5 cut(s)	5, 141, 180, 304, 2518
BsaJI	CCNNGG	4 cut(s)	1203, 2142, 2467, 2777
BsaXI	ACNNNNNCTCC	2 cut(s)	2892, 2922
Bse21I	CCTNAGG	1 cut(s)	1944
Bse3DI	GCAATG	2 cut(s)	1013, 1278
Bse8I	GATNNNNATC	1 cut(s)	1737
BseBI	CCWGG	2 cut(s)	935, 2669
BseDI	CCNNGG	4 cut(s)	1203, 2142, 2467, 2777
BseGI	GGATG	7 cut(s)	387, 757, 943, 1048, 2047, 2152, 2595
BseJI	GATNNNNATC	1 cut(s)	1737
BseMI	GCAATG	2 cut(s)	1013, 1278
BseMII	CTCAG	7 cut(s)	534, 619, 833, 1580, 1958, 2090, 2497
BseRI	GAGGAG	1 cut(s)	468
BseSI	GKGCMC	1 cut(s)	1394
BseXI	GCAGC	6 cut(s)	818, 821, 1007, 1145, 1246, 1417
BsgI	GTGCAG	2 cut(s)	2394, 2966
Bsh1236I	CGCG	4 cut(s)	198, 407, 943, 2232
BshNI	GGYRCC	3 cut(s)	179, 303, 1681
BsiHKAI	GWGCWC	1 cut(s)	1624
BsiHKCI	CYCGRG	1 cut(s)	480
BsiSI	CCGG	2 cut(s)	98, 1088
BslFI	GGGAC	5 cut(s)	80, 631, 877, 2285, 2531
BsmAI	GTCTC	4 cut(s)	1759, 2079, 2711, 2798
BsmBI	CGTCTC	1 cut(s)	2798
BsmFI	GGGAC	5 cut(s)	80, 631, 877, 2285, 2531
BsoBI	CYCGRG	1 cut(s)	480
Bsp1286I	GDGCHC	3 cut(s)	317, 1394, 1624
Bsp1720I	GCTNAGC	1 cut(s)	1566
Bsp68I	TCGCGA	1 cut(s)	2232
BspACI	CCGC	8 cut(s)	38, 51, 86, 198, 405, 1043, 2245, 2297
BspCNI	CTCAG	7 cut(s)	535, 618, 832, 1579, 1957, 2089, 2496
BspFNI	CGCG	4 cut(s)	198, 407, 943, 2232
BspHI	TCATGA	2 cut(s)	1222, 2437
BspLI	GGNNCC	8 cut(s)	123, 181, 305, 1508, 1683, 2273, 2875, 2995
BspMAI	CTGCAG	1 cut(s)	1837
BspMI	ACCTGC	1 cut(s)	2988
BspOI	GCTAGC	2 cut(s)	1667, 2939
BspPI	GGATC	9 cut(s)	98, 494, 692, 1053, 1501, 1514, 1934, 2486, 2906
BspT107I	GGYRCC	3 cut(s)	179, 303, 1681
BspTI	CTTAAG	1 cut(s)	152
BsrDI	GCAATG	2 cut(s)	1013, 1278
BssECI	CCNNGG	4 cut(s)	1203, 2142, 2467, 2777
BssNAI	GTATAC	1 cut(s)	1765
BssNI	GRCGYC	5 cut(s)	5, 141, 180, 304, 2518
BssT1I	CCWWGG	3 cut(s)	1203, 2467, 2777
Bst1107I	GTATAC	1 cut(s)	1765
Bst2UI	CCWGG	2 cut(s)	935, 2669
Bst4CI	ACNGT	7 cut(s)	160, 1389, 1534, 1681, 1753, 1762, 1984
Bst6I	CTCTTC	5 cut(s)	241, 1324, 1401, 1481, 2843
BstACI	GRCGYC	5 cut(s)	5, 141, 180, 304, 2518
BstAFI	CTTAAG	1 cut(s)	152
BstAPI	GCANNNNNTGC	1 cut(s)	992
BstC8I	GCNNGC	9 cut(s)	48, 149, 205, 308, 491, 1665, 2109, 2530, 2937
BstDSI	CCRYGG	1 cut(s)	2142
BstF5I	GGATG	7 cut(s)	387, 757, 943, 1048, 2047, 2152, 2595
BstFNI	CGCG	4 cut(s)	198, 407, 943, 2232
BstH2I	RGCGCY	3 cut(s)	183, 307, 2907
BstHHI	GCGC	6 cut(s)	182, 306, 409, 943, 1368, 2906
BstMAI	GTCTC	4 cut(s)	1759, 2079, 2711, 2798
BstMWI	GCNNNNNNNGC	8 cut(s)	204, 312, 524, 815, 992, 1268, 1955, 2529
BstNI	CCWGG	2 cut(s)	935, 2669
BstNSI	RCATGY	2 cut(s)	1256, 2111
BstSCI	CCNGG	3 cut(s)	96, 933, 2667
BstSFI	CTRYAG	1 cut(s)	1833
BstSLI	GKGCMC	1 cut(s)	1394
BstUI	CGCG	4 cut(s)	198, 407, 943, 2232
BstV1I	GCAGC	6 cut(s)	818, 821, 1007, 1145, 1246, 1417
BstV2I	GAAGAC	2 cut(s)	651, 2201
BstX2I	RGATCY	2 cut(s)	1506, 1939
BstYI	RGATCY	2 cut(s)	1506, 1939
BstZ17I	GTATAC	1 cut(s)	1765
Bsu36I	CCTNAGG	1 cut(s)	1944
BtgI	CCRYGG	1 cut(s)	2142
BtsCI	GGATG	7 cut(s)	387, 757, 943, 1048, 2047, 2152, 2595
BtsI	GCAGTG	1 cut(s)	2382
BtsIMutI	CAGTG	7 cut(s)	672, 978, 1394, 1530, 1914, 2040, 2382
BtuMI	TCGCGA	1 cut(s)	2232
BveI	ACCTGC	1 cut(s)	2988
Cac8I	GCNNGC	9 cut(s)	48, 149, 205, 308, 491, 1665, 2109, 2530, 2937
CaiI	CAGNNNCTG	3 cut(s)	1430, 1892, 2674
CciI	TCATGA	2 cut(s)	1222, 2437
CfoI	GCGC	6 cut(s)	182, 306, 409, 943, 1368, 2906
Cfr13I	GGNCC	8 cut(s)	163, 442, 1175, 2030, 2132, 2272, 2464, 2874
CseI	GACGC	2 cut(s)	992, 2507
Csp6I	GTAC	8 cut(s)	169, 209, 1239, 1682, 2346, 2603, 2690, 2977
CspCI	CAANNNNNGTGG	6 cut(s)	1363, 1398, 2538, 2573, 2907, 2942
CviAII	CATG	7 cut(s)	894, 1223, 1253, 2108, 2191, 2438, 2600
CviQI	GTAC	8 cut(s)	169, 209, 1239, 1682, 2346, 2603, 2690, 2977
DinI	GGCGCC	2 cut(s)	181, 305
DraI	TTTAAA	2 cut(s)	1096, 1818
EaeI	YGGCCR	3 cut(s)	48, 508, 2530
Eam1104I	CTCTTC	5 cut(s)	241, 1324, 1401, 1481, 2843
EarI	CTCTTC	5 cut(s)	241, 1324, 1401, 1481, 2843
Eco130I	CCWWGG	3 cut(s)	1203, 2467, 2777
Eco147I	AGGCCT	1 cut(s)	1949
Eco24I	GRGCYC	1 cut(s)	317
Eco32I	GATATC	1 cut(s)	2446
Eco47I	GGWCC	5 cut(s)	163, 1175, 2272, 2464, 2874
Eco57I	CTGAAG	2 cut(s)	2019, 2133
Eco81I	CCTNAGG	1 cut(s)	1944
Eco88I	CYCGRG	1 cut(s)	480
EcoO109I	RGGNCCY	1 cut(s)	2272
EcoRI	GAATTC	3 cut(s)	365, 1148, 2593
EcoRII	CCWGG	2 cut(s)	933, 2667
EcoRV	GATATC	1 cut(s)	2446
EcoT14I	CCWWGG	3 cut(s)	1203, 2467, 2777
EcoT22I	ATGCAT	3 cut(s)	955, 1060, 1192
EcoT38I	GRGCYC	1 cut(s)	317
EgeI	GGCGCC	2 cut(s)	181, 305
EheI	GGCGCC	2 cut(s)	181, 305
ErhI	CCWWGG	3 cut(s)	1203, 2467, 2777
Esp3I	CGTCTC	1 cut(s)	2798
FaeI	CATG	7 cut(s)	897, 1226, 1256, 2111, 2194, 2441, 2603
FalI	AAGNNNNNCTT	6 cut(s)	1554, 1586, 1833, 1865, 2679, 2711
FaqI	GGGAC	5 cut(s)	80, 631, 877, 2285, 2531
FatI	CATG	7 cut(s)	893, 1222, 1252, 2107, 2190, 2437, 2599
FauI	CCCGC	4 cut(s)	31, 79, 2238, 2290
FauNDI	CATATG	2 cut(s)	1519, 1960
FbaI	TGATCA	1 cut(s)	427
FblI	GTMKAC	1 cut(s)	1764
Fnu4HI	GCNGC	7 cut(s)	51, 807, 810, 996, 1134, 1260, 1431
FokI	GGATG	7 cut(s)	394, 764, 950, 1035, 2054, 2159, 2602
FriOI	GRGCYC	1 cut(s)	317
Fsp4HI	GCNGC	7 cut(s)	51, 807, 810, 996, 1134, 1260, 1431
FspBI	CTAG	3 cut(s)	1664, 2388, 2936
GlaI	GCGC	6 cut(s)	181, 305, 408, 942, 1367, 2905
GluI	GCNGC	7 cut(s)	51, 807, 810, 996, 1134, 1260, 1431
GsuI	CTGGAG	2 cut(s)	266, 2651
HaeII	RGCGCY	3 cut(s)	183, 307, 2907
HapII	CCGG	2 cut(s)	98, 1088
HgaI	GACGC	2 cut(s)	992, 2507
HhaI	GCGC	6 cut(s)	182, 306, 409, 943, 1368, 2906
Hin1I	GRCGYC	5 cut(s)	5, 141, 180, 304, 2518
Hin1II	CATG	7 cut(s)	897, 1226, 1256, 2111, 2194, 2441, 2603
Hin6I	GCGC	6 cut(s)	180, 304, 407, 941, 1366, 2904
HinP1I	GCGC	6 cut(s)	180, 304, 407, 941, 1366, 2904
HincII	GTYRAC	2 cut(s)	359, 931
HindII	GTYRAC	2 cut(s)	359, 931
HindIII	AAGCTT	1 cut(s)	1450
HpaII	CCGG	2 cut(s)	98, 1088
HphI	GGTGA	4 cut(s)	729, 2699, 2846, 2905
Hpy166II	GTNNAC	8 cut(s)	163, 359, 931, 1241, 1646, 1765, 2124, 2284
Hpy8I	GTNNAC	8 cut(s)	163, 359, 931, 1241, 1646, 1765, 2124, 2284
Hpy99I	CGWCG	6 cut(s)	10, 85, 146, 179, 398, 2523
HpyAV	CCTTC	8 cut(s)	1769, 1835, 2218, 2498, 2570, 2637, 2705, 2864
HpyCH4III	ACNGT	7 cut(s)	160, 1389, 1534, 1681, 1753, 1762, 1984
HpyCH4IV	ACGT	4 cut(s)	141, 174, 216, 927
HpyF10VI	GCNNNNNNNGC	8 cut(s)	204, 312, 524, 815, 992, 1268, 1955, 2529
HpySE526I	ACGT	4 cut(s)	141, 174, 216, 927
Hsp92I	GRCGYC	5 cut(s)	5, 141, 180, 304, 2518
Hsp92II	CATG	7 cut(s)	897, 1226, 1256, 2111, 2194, 2441, 2603
HspAI	GCGC	6 cut(s)	180, 304, 407, 941, 1366, 2904
KasI	GGCGCC	2 cut(s)	179, 303
KpnI	GGTACC	1 cut(s)	1685
Ksp22I	TGATCA	1 cut(s)	427
LmnI	GCTCC	3 cut(s)	1619, 2424, 2932
Lsp1109I	GCAGC	6 cut(s)	818, 821, 1007, 1145, 1246, 1417
LweI	GCATC	7 cut(s)	928, 1177, 1189, 1216, 2013, 2059, 2406
MaeI	CTAG	3 cut(s)	1664, 2388, 2936
MaeII	ACGT	4 cut(s)	141, 174, 216, 927
MfeI	CAATTG	1 cut(s)	2292
MflI	RGATCY	2 cut(s)	1506, 1939
MhlI	GDGCHC	3 cut(s)	317, 1394, 1624
MlsI	TGGCCA	1 cut(s)	2532
MluNI	TGGCCA	1 cut(s)	2532
Mly113I	GGCGCC	2 cut(s)	180, 304
MlyI	GAGTC	8 cut(s)	218, 469, 492, 597, 610, 798, 1535, 2891
MmeI	TCCRAC	5 cut(s)	625, 1125, 1463, 1597, 2019
Mox20I	TGGCCA	1 cut(s)	2532
Mph1103I	ATGCAT	3 cut(s)	955, 1060, 1192
MscI	TGGCCA	1 cut(s)	2532
MseI	TTAA	9 cut(s)	153, 330, 1095, 1601, 1817, 1863, 2061, 2241, 2316
MslI	CAYNNNNRTG	6 cut(s)	272, 1053, 1224, 2021, 2712, 2988
Msp20I	TGGCCA	1 cut(s)	2532
MspA1I	CMGCKG	1 cut(s)	2528
MspCI	CTTAAG	1 cut(s)	152
MspI	CCGG	2 cut(s)	98, 1088
MspR9I	CCNGG	3 cut(s)	98, 935, 2669
MunI	CAATTG	1 cut(s)	2292
MvaI	CCWGG	2 cut(s)	935, 2669
MvnI	CGCG	4 cut(s)	198, 407, 943, 2232
MwoI	GCNNNNNNNGC	8 cut(s)	204, 312, 524, 815, 992, 1268, 1955, 2529
NarI	GGCGCC	2 cut(s)	180, 304
NciI	CCSGG	1 cut(s)	98
NdeI	CATATG	2 cut(s)	1519, 1960
NheI	GCTAGC	2 cut(s)	1663, 2935
NlaIII	CATG	7 cut(s)	897, 1226, 1256, 2111, 2194, 2441, 2603
NlaIV	GGNNCC	8 cut(s)	123, 181, 305, 1508, 1683, 2273, 2875, 2995
NmeAIII	GCCGAG	1 cut(s)	494
NmuCI	GTSAC	4 cut(s)	735, 829, 1528, 2797
NruI	TCGCGA	1 cut(s)	2232
NsiI	ATGCAT	3 cut(s)	955, 1060, 1192
NspI	RCATGY	2 cut(s)	1256, 2111
PaeI	GCATGC	1 cut(s)	2111
PaeR7I	CTCGAG	1 cut(s)	480
PagI	TCATGA	2 cut(s)	1222, 2437
PceI	AGGCCT	1 cut(s)	1949
PfeI	GAWTC	5 cut(s)	256, 557, 1169, 1340, 2219
PflFI	GACNNNGTC	1 cut(s)	227
PflMI	CCANNNNNTGG	4 cut(s)	1355, 1659, 1691, 2674
PfoI	TCCNGGA	2 cut(s)	96, 2667
PkrI	GCNGC	7 cut(s)	52, 808, 811, 997, 1135, 1261, 1432
PleI	GAGTC	8 cut(s)	218, 469, 491, 597, 610, 797, 1535, 2890
PluTI	GGCGCC	2 cut(s)	183, 307
PpsI	GAGTC	8 cut(s)	218, 469, 491, 597, 610, 797, 1535, 2890
PpuMI	RGGWCCY	1 cut(s)	2272
PshBI	ATTAAT	2 cut(s)	2061, 2316
PsiI	TTATAA	1 cut(s)	1991
Psp5II	RGGWCCY	1 cut(s)	2272
Psp6I	CCWGG	2 cut(s)	933, 2667
PspGI	CCWGG	2 cut(s)	933, 2667
PspN4I	GGNNCC	8 cut(s)	123, 181, 305, 1508, 1683, 2273, 2875, 2995
PspPI	GGNCC	8 cut(s)	163, 442, 1175, 2030, 2132, 2272, 2464, 2874
PspPPI	RGGWCCY	1 cut(s)	2272
PspXI	VCTCGAGB	1 cut(s)	480
PstI	CTGCAG	1 cut(s)	1837
PstNI	CAGNNNCTG	3 cut(s)	1430, 1892, 2674
PsuI	RGATCY	2 cut(s)	1506, 1939
PsyI	GACNNNGTC	1 cut(s)	227
PvuII	CAGCTG	1 cut(s)	2528
RruI	TCGCGA	1 cut(s)	2232
RsaI	GTAC	8 cut(s)	170, 210, 1240, 1683, 2347, 2604, 2691, 2978
RsaNI	GTAC	8 cut(s)	169, 209, 1239, 1682, 2346, 2603, 2690, 2977
RseI	CAYNNNNRTG	6 cut(s)	272, 1053, 1224, 2021, 2712, 2988
SaqAI	TTAA	9 cut(s)	153, 330, 1095, 1601, 1817, 1863, 2061, 2241, 2316
SatI	GCNGC	7 cut(s)	51, 807, 810, 996, 1134, 1260, 1431
Sau96I	GGNCC	8 cut(s)	163, 442, 1175, 2030, 2132, 2272, 2464, 2874
ScaI	AGTACT	2 cut(s)	170, 2691
SchI	GAGTC	8 cut(s)	218, 469, 492, 597, 610, 798, 1535, 2891
ScrFI	CCNGG	3 cut(s)	98, 935, 2669
SduI	GDGCHC	3 cut(s)	317, 1394, 1624
SfaNI	GCATC	7 cut(s)	928, 1177, 1189, 1216, 2013, 2059, 2406
SfcI	CTRYAG	1 cut(s)	1833
SfoI	GGCGCC	2 cut(s)	181, 305
Sfr274I	CTCGAG	1 cut(s)	480
SinI	GGWCC	5 cut(s)	163, 1175, 2272, 2464, 2874
SlaI	CTCGAG	1 cut(s)	480
SmiMI	CAYNNNNRTG	6 cut(s)	272, 1053, 1224, 2021, 2712, 2988
SmlI	CTYRAG	4 cut(s)	152, 480, 620, 1714
SmoI	CTYRAG	4 cut(s)	152, 480, 620, 1714
SphI	GCATGC	1 cut(s)	2111
SseBI	AGGCCT	1 cut(s)	1949
SsiI	CCGC	8 cut(s)	38, 51, 86, 198, 405, 1043, 2245, 2297
SspDI	GGCGCC	2 cut(s)	179, 303
SspMI	CTAG	3 cut(s)	1664, 2388, 2936
StuI	AGGCCT	1 cut(s)	1949
StyD4I	CCNGG	3 cut(s)	96, 933, 2667
StyI	CCWWGG	3 cut(s)	1203, 2467, 2777
TaaI	ACNGT	7 cut(s)	160, 1389, 1534, 1681, 1753, 1762, 1984
TaiI	ACGT	4 cut(s)	144, 177, 219, 930
TaqI	TCGA	6 cut(s)	363, 481, 555, 574, 1741, 1969
TatI	WGTACW	3 cut(s)	168, 2345, 2689
TauI	GCSGC	1 cut(s)	53
TfiI	GAWTC	5 cut(s)	256, 557, 1169, 1340, 2219
Tru1I	TTAA	9 cut(s)	153, 330, 1095, 1601, 1817, 1863, 2061, 2241, 2316
Tru9I	TTAA	9 cut(s)	153, 330, 1095, 1601, 1817, 1863, 2061, 2241, 2316
TscAI	CASTG	7 cut(s)	679, 985, 1394, 1537, 1921, 2040, 2382
TseFI	GTSAC	4 cut(s)	735, 829, 1528, 2797
TseI	GCWGC	6 cut(s)	806, 809, 995, 1133, 1259, 1430
Tsp45I	GTSAC	4 cut(s)	735, 829, 1528, 2797
TspGWI	ACGGA	3 cut(s)	217, 1519, 2231
TspRI	CASTG	7 cut(s)	679, 985, 1394, 1537, 1921, 2040, 2382
Tth111I	GACNNNGTC	1 cut(s)	227
Van91I	CCANNNNNTGG	4 cut(s)	1355, 1659, 1691, 2674
Vha464I	CTTAAG	1 cut(s)	152
VpaK11BI	GGWCC	5 cut(s)	163, 1175, 2272, 2464, 2874
VspI	ATTAAT	2 cut(s)	2061, 2316
XapI	RAATTY	8 cut(s)	365, 889, 914, 1110, 1148, 1379, 2325, 2593
XceI	RCATGY	2 cut(s)	1256, 2111
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1059, 1656
XhoI	CTCGAG	1 cut(s)	480
XmiI	GTMKAC	1 cut(s)	1764
XspI	CTAG	3 cut(s)	1664, 2388, 2936
ZraI	GACGTC	1 cut(s)	142
ZrmI	AGTACT	2 cut(s)	170, 2691
Zsp2I	ATGCAT	3 cut(s)	955, 1060, 1192

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.