Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0009766

Physical Location & Seq

Genomic Coordinates Reverse (-)

89273049 .. 89279903

Gene Structure 6855 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG684700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2703 bp

ATGGCTTCTTCTACTGCGTGGGCGATGCTGCTGGTGGCGGTCTTATTGGCACAGTTGCTGGCTGCAAGATCGGAGTACATAGCTTACAATACGACGGCGGGGATCGTCCAGGAGAAACTCAACGTTCATTTGGTTCCTCACTCTCACGACGACGTCGGGTGGCTTAAGACGGTGGACCAGTACTACGTGGGCTCCAACAATTCAATTCGAGGTGCGTGTGTACAGAACGTCATTGACTCTGTCATCTCTGCCTTATTGGAGGACAAGAATCGCAAGTTCATCTATGTTGAGATTGCATTCTTTCAGAGATGGTGGAGACAGCAAAGCCCTGCTATGAAGATCAAAGCCAAGGACCTGGTCAGCTCCGGTCAACTCGAGTTCATAAATGGGGGCATGTGTATGCACGACGAGGCCACCCCGCATTACATTGACTTGATTGATCAGACTACCCTAGGGCATCAATTTATACTGAAAGAGTTTGGTCAGACTCCTCGAGTTGGCTGGCAGATTGATCCTTTTGGCCATTCTGCTGTTCAAGCTTACTTGCTTGGTGCTGAGTTAGGTTTCGATTCCCTCTTTTTTGCACGAATTGATTACCAAGATAGAGCAGTCCGGCTCAGGGATAAGACCCTTGAGGTTATATGGCAGGGTTCTAAGTCCCTTGCTGCATCTTCACAGATTTTCACTGGCGTATTCCCCAGGCACTATGATCCTCCAGATGGTTTCGTATTTGAAATAAATGATGTGTCACCTCCTATTCAGGATGACATTCTCCTGTTTGACTACAATGTTCAAGAGCGAGTCAATGACTTTGTTGCAGCTGCTTTAGCTCAGGCTAATGTGACAAGAACAAATCATATTATGTGGACCATGGGGACAGATTTTCGCTACCAATATGGAAATTCATGGTTCAGGCAGATGGACAAATTCATTCATTATGTCAACCAGGCTGAAAAGTTGGTCGCCTCTTCTCTTGCTTACCTTTCTGAGTCAGAACCAAGTTCTGGACGGAAGCGCATAGCCACAAAATTTGAACAGTGTCCTCTTCTAAACATCAGTTATTGTCCTCCATCAGAAACTGCTTTATCCGATGGGAAAAGCTTGGTTGTTGTTATCTACAATCCTCTTGGTTGGAAGAGAGAGGAAGTAATACGGATCCCTGTTTCCAATGAAAGGGTCACTGTTCAGGATTCTAGCCAAAGAAAAATTGATGCTCAGCTTTTACCTCTCTCAAATTCCACTTTGAAATTAAGAAGTTACTATGTCAGAGCATATTTGGGTATTACCCCAAGTGAACCGCCCAAATATTGGCTAGCTTTTTCAGTAACAGTACCACCACTTGGTTTCAGCTCTTACATTGTCTCAAGTGCAAATCAGACAGATAAAGATCGAAGCTCGACTATCTCCAAAGTATACACATCAGAAGGAAATACAAATAAGACCATACAAGTTGGGCAAGGGAGTTTAAAGCTATTTTATTCTGCAGAAGGAAAGCTTGCTCGTTATATTAACAGCAGAAATATGGTTACAGCGGTTGCTGAACAATCATATAGTTATTATACTGGAAACGATGGAACTGACAAAGATCCTCAGGCCTCTGGGGCATATGTATTTAGACCGAATGGCACAGTTGTTATAAAATCTGAAGAAAAGGTTTCTCTCACCGTGATGCGAGGCCCATTATTGGATGAAGTGCATCAGCAGATCAATCCATGGGTATCTCAGATTACAAGGTTATACAAAGGAAAGGAGCACGCTGAAGTAGAGTTCACTATTGGGCCTATACCCGTGGATGATGGTATTGGAAAAGAAATCACAACTCAACTTACAACAGCCATGAAGACCAATAAGACATTCTACACAGATTCCAATGGTCGCGACTTCATTAAGCGGATTCGAGATTTCAGGACAGATTGGGACCTACAAGTGAACCAACCAATTGCTGGAAATTATTACCCGATTAATCTTGGAATTTATGTGCAAGATAGCACTACAGAATTTTCAGTCTTGGTTGATCGTGCAGTGGGAGGATCTAGCTTAGTAGATGGTCAAGTAGAGCTGATGCTCCACAGGAGGCTAACTCATGATGATATCAGAGGTGTTGGCGAGATACTAAATGAAACGGTTTGCGTTTCTGAGAAGTGTGAAGGTTTAACTATCCAAGGGAAGTTTTATGTCAGAATCGATCCTGTTGGAGAAGGTTCTAAGTGGCGTCGCACAGCTGGCCAAGAGATAAGTGCTCCACTTTTATTGGCCTTCGCTGAACAGGAAGGAAATGATTGGATGAATTCTCATGTATCAACATTTTCTGGAATTGACCCTTCCTATGCCTTACCAGACAATGTTGCTGTGATAACCCTCCAGGAACTTGAAAATGGGAAAGTACTGCTTCGTTTGGCTCACCTATACGAGACTGGCGAGGACAAGGACTATTCTGTATTGGCAAATGTGGAACTAAGAAAGTTGTTTCCCAGGAAGAAGATCAGCAAAGTGACAGAGATGAGTTTATCTGCCAATCAAGAAAGAGCTGAAATGGAGAAGAGGAAATTAGTTTGGAAAGTGGAAGGTTCTGCCGCAGCCGAAGAGTCTAAGGTGGTGAGGGGAGGCGCTGTTGACCCTGCAAAACTGGTGGTGGAACTAGCACCAATGGAAATACGCACTTTCCTTATTGACTTGGATTACCTCCATATGTATGGTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0003674 GO:0003824 GO:0004553 GO:0004559 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005774 GO:0005975 GO:0005996 GO:0006013 GO:0006464 GO:0006517 GO:0006807 GO:0008150 GO:0008152 GO:0009100 GO:0009505 GO:0009987 GO:0015923 GO:0016020 GO:0016787 GO:0016798 GO:0019318 GO:0019538 GO:0030312 GO:0031090 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044281 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0071704 GO:0071944 GO:0098588 GO:0098805 GO:1901135 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00511 map00511

Pfam Domains

Protein Families

Alpha-mann_mid Glyco_hydro_38 Glyco_hydro_38C

Protein Analysis

900

Amino Acids

101.12

Weight (kDa)

5.82

Isoelectric Point (pI)

35.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_38N	PF01074	41 - 319	2.9e-79	Glycosyl hydrolases family 38 N-terminal domain
Laman-like_dom	PF21260	403 - 454	4.1e-09	Lysosomal alpha-mannosidase-like, central domain
Glyco_hydro_38C	PF07748	486 - 699	5.5e-45	Glycosyl hydrolases family 38 C-terminal domain
Glyco_hydro38C2	PF17677	781 - 888	5.7e-08	Glycosyl hydrolases family 38 C-terminal beta sandwich domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009766)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26720 AT3G26720 AT3G26720 AT3G26720 AT3G26720
fragaria_vesca	FvH4_6g54280 FvH4_6g54280 FvH4_6g54280 FvH4_6g54280
malus_domestica	MD09G1002800.v1.1
prunus_persica	Prupe.3G313400_v2.0.a1 Prupe.3G313400_v2.0.a1
pyrus_communis	pycom111g00230
rosa_chinensis	RchiOBHm_Chr2g0176491
rosa_laevigata	RLG00000022417
rosa_roxburghii	Rroxscaffold_2G00076340
rosa_rugosa	Rorug02G0595100
rosa_samantha	Rh2AG673400 Rh2BG684700 Rh2DG698300
rosa_wichuraiana	Rw2G055230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1637
AatII	GACGTC	1 cut(s)	156
AccB7I	CCANNNNNTGG	4 cut(s)	1004, 1308, 1340, 1943
AccI	GTMKAC	1 cut(s)	1413
AccII	CGCG	1 cut(s)	1878
AciI	CCGC	7 cut(s)	38, 98, 419, 1298, 1532, 1891, 2574
AclI	AACGTT	1 cut(s)	123
AclWI	GGATC	8 cut(s)	110, 506, 704, 1150, 1163, 1580, 2038, 2180
AcoI	YGGCCR	2 cut(s)	520, 2224
AcsI	RAATTY	7 cut(s)	901, 926, 1028, 1234, 1971, 1997, 2287
AcuI	CTGAAG	2 cut(s)	1665, 1779
AcyI	GRCGYC	2 cut(s)	153, 2212
AfaI	GTAC	5 cut(s)	77, 182, 222, 1332, 2385
AfiI	CCNNNNNNNGG	9 cut(s)	497, 619, 719, 1004, 1173, 1308, 1340, 1684, 1943
AflII	CTTAAG	1 cut(s)	164
AgsI	TTSAA	7 cut(s)	204, 536, 734, 794, 1034, 1246, 2372
AjnI	CCWGG	6 cut(s)	108, 354, 698, 945, 2361, 2471
AjuI	GAANNNNNNNTTGG	2 cut(s)	1838, 1870
Alw21I	GWGCWC	2 cut(s)	1755, 2242
Alw26I	GTCTC	3 cut(s)	310, 1366, 2405
AlwI	GGATC	8 cut(s)	110, 506, 704, 1150, 1163, 1580, 2038, 2180
AlwNI	CAGNNNCTG	2 cut(s)	58, 1079
Ama87I	CYCGRG	2 cut(s)	374, 492
AoxI	GGCC	7 cut(s)	411, 520, 1593, 1675, 1778, 2224, 2253
ApeKI	GCWGC	6 cut(s)	28, 62, 665, 818, 821, 2576
ApoI	RAATTY	7 cut(s)	901, 926, 1028, 1234, 1971, 1997, 2287
AseI	ATTAAT	1 cut(s)	1962
AspA2I	CCTAGG	1 cut(s)	451
AspLEI	GCGC	2 cut(s)	1017, 2609
AspS9I	GGNCC	6 cut(s)	175, 352, 867, 1676, 1778, 1918
AsuHPI	GGTGA	4 cut(s)	741, 1654, 2393, 2608
AsuNHI	GCTAGC	1 cut(s)	1312
AvaI	CYCGRG	2 cut(s)	374, 492
AvaII	GGWCC	4 cut(s)	175, 352, 867, 1918
AvrII	CCTAGG	1 cut(s)	451
AxyI	CCTNAGG	1 cut(s)	1590
BalI	TGGCCA	2 cut(s)	522, 2226
BamHI	GGATCC	1 cut(s)	1155
BanII	GRGCYC	1 cut(s)	194
BbsI	GAAGAC	1 cut(s)	1847
Bbv12I	GWGCWC	2 cut(s)	1755, 2242
BbvI	GCAGC	6 cut(s)	15, 49, 652, 808, 830, 2588
BccI	CCATC	8 cut(s)	303, 713, 913, 1078, 1085, 1565, 1790, 2039
BceAI	ACGGC	1 cut(s)	111
BciT130I	CCWGG	6 cut(s)	110, 356, 700, 947, 2363, 2473
BclI	TGATCA	1 cut(s)	439
BcoDI	GTCTC	3 cut(s)	310, 1366, 2405
BfaI	CTAG	5 cut(s)	452, 1194, 1313, 2034, 2639
BfmI	CTRYAG	2 cut(s)	1482, 1992
BfoI	RGCGCY	1 cut(s)	2610
BfrI	CTTAAG	1 cut(s)	164
BglI	GCCNNNNNGGC	1 cut(s)	1601
BisI	GCNGC	7 cut(s)	29, 63, 666, 819, 822, 2574, 2577
BlnI	CCTAGG	1 cut(s)	451
BlpI	GCTNAGC	1 cut(s)	1215
BlsI	GCNGC	7 cut(s)	30, 64, 667, 820, 823, 2575, 2578
BmcAI	AGTACT	2 cut(s)	182, 2385
Bme1390I	CCNGG	6 cut(s)	110, 356, 700, 947, 2363, 2473
Bme18I	GGWCC	4 cut(s)	175, 352, 867, 1918
BmeT110I	CYCGRG	2 cut(s)	374, 492
BmgT120I	GGNCC	6 cut(s)	175, 352, 867, 1676, 1778, 1918
BmiI	GGNNCC	5 cut(s)	135, 193, 1157, 1919, 2698
BmrFI	CCNGG	6 cut(s)	110, 356, 700, 947, 2363, 2473
BmsI	GCATC	7 cut(s)	15, 466, 677, 1201, 1659, 1705, 2052
BmtI	GCTAGC	1 cut(s)	1316
BpiI	GAAGAC	1 cut(s)	1847
BplI	GAGNNNNNCTC	2 cut(s)	2065, 2097
BpmI	CTGGAG	2 cut(s)	699, 2345
Bpu10I	CCTNAGC	2 cut(s)	617, 831
Bpu1102I	GCTNAGC	1 cut(s)	1215
BpuEI	CTTGAG	2 cut(s)	653, 1348
Bsa29I	ATCGAT	1 cut(s)	2184
BsaAI	YACGTR	1 cut(s)	187
BsaBI	GATNNNNATC	1 cut(s)	1386
BsaHI	GRCGYC	2 cut(s)	153, 2212
BsaJI	CCNNGG	8 cut(s)	348, 451, 698, 870, 1712, 1788, 2161, 2471
BsaWI	WCCGGW	1 cut(s)	365
BsaXI	ACNNNNNCTCC	4 cut(s)	176, 206, 2595, 2625
Bsc4I	CCNNNNNNNGG	9 cut(s)	497, 619, 719, 1004, 1173, 1308, 1340, 1684, 1943
Bse1I	ACTGG	5 cut(s)	178, 691, 1567, 2419, 2631
Bse21I	CCTNAGG	1 cut(s)	1590
Bse8I	GATNNNNATC	1 cut(s)	1386
BseBI	CCWGG	6 cut(s)	110, 356, 700, 947, 2363, 2473
BseCI	ATCGAT	1 cut(s)	2184
BseDI	CCNNGG	8 cut(s)	348, 451, 698, 870, 1712, 1788, 2161, 2471
BseGI	GGATG	4 cut(s)	769, 1693, 1798, 2289
BseJI	GATNNNNATC	1 cut(s)	1386
BseLI	CCNNNNNNNGG	9 cut(s)	497, 619, 719, 1004, 1173, 1308, 1340, 1684, 1943
BseMII	CTCAG	8 cut(s)	546, 631, 845, 978, 1229, 1604, 1736, 2127
BseNI	ACTGG	5 cut(s)	178, 691, 1567, 2419, 2631
BseRI	GAGGAG	1 cut(s)	480
BseXI	GCAGC	6 cut(s)	15, 49, 652, 808, 830, 2588
BsgI	GTGCAG	1 cut(s)	2040
Bsh1236I	CGCG	1 cut(s)	1878
BshFI	GGCC	7 cut(s)	413, 522, 1595, 1677, 1780, 2226, 2255
BshVI	ATCGAT	1 cut(s)	2184
BsiHKAI	GWGCWC	2 cut(s)	1755, 2242
BsiHKCI	CYCGRG	2 cut(s)	374, 492
BsiSI	CCGG	2 cut(s)	366, 613
BslFI	GGGAC	3 cut(s)	643, 889, 1931
BslI	CCNNNNNNNGG	9 cut(s)	497, 619, 719, 1004, 1173, 1308, 1340, 1684, 1943
BsmAI	GTCTC	3 cut(s)	310, 1366, 2405
BsmFI	GGGAC	3 cut(s)	643, 889, 1931
BsmI	GAATGC	1 cut(s)	296
BsnI	GGCC	7 cut(s)	413, 522, 1595, 1677, 1780, 2226, 2255
BsoBI	CYCGRG	2 cut(s)	374, 492
Bsp1286I	GDGCHC	3 cut(s)	194, 1755, 2242
Bsp1407I	TGTACA	1 cut(s)	220
Bsp1720I	GCTNAGC	1 cut(s)	1215
Bsp19I	CCATGG	2 cut(s)	870, 1712
Bsp68I	TCGCGA	1 cut(s)	1878
BspACI	CCGC	7 cut(s)	38, 98, 419, 1298, 1532, 1891, 2574
BspANI	GGCC	7 cut(s)	413, 522, 1595, 1677, 1780, 2226, 2255
BspCNI	CTCAG	8 cut(s)	547, 630, 844, 979, 1228, 1603, 1735, 2128
BspDI	ATCGAT	1 cut(s)	2184
BspFNI	CGCG	1 cut(s)	1878
BspHI	TCATGA	1 cut(s)	2083
BspLI	GGNNCC	5 cut(s)	135, 193, 1157, 1919, 2698
BspMAI	CTGCAG	1 cut(s)	1486
BspOI	GCTAGC	1 cut(s)	1316
BspPI	GGATC	8 cut(s)	110, 506, 704, 1150, 1163, 1580, 2038, 2180
BspTI	CTTAAG	1 cut(s)	164
BsrGI	TGTACA	1 cut(s)	220
BsrI	ACTGG	5 cut(s)	178, 691, 1567, 2419, 2631
BssECI	CCNNGG	8 cut(s)	348, 451, 698, 870, 1712, 1788, 2161, 2471
BssNAI	GTATAC	1 cut(s)	1414
BssNI	GRCGYC	2 cut(s)	153, 2212
BssT1I	CCWWGG	5 cut(s)	348, 451, 870, 1712, 2161
Bst1107I	GTATAC	1 cut(s)	1414
Bst2UI	CCWGG	6 cut(s)	110, 356, 700, 947, 2363, 2473
Bst4CI	ACNGT	8 cut(s)	54, 172, 1038, 1183, 1330, 1630, 1666, 2125
Bst6I	CTCTTC	5 cut(s)	973, 1050, 1130, 2534, 2577
BstACI	GRCGYC	2 cut(s)	153, 2212
BstAFI	CTTAAG	1 cut(s)	164
BstAUI	TGTACA	1 cut(s)	220
BstBAI	YACGTR	1 cut(s)	187
BstC8I	GCNNGC	6 cut(s)	60, 503, 1314, 1497, 1755, 2224
BstDSI	CCRYGG	3 cut(s)	870, 1712, 1788
BstF5I	GGATG	4 cut(s)	769, 1693, 1798, 2289
BstFNI	CGCG	1 cut(s)	1878
BstH2I	RGCGCY	1 cut(s)	2610
BstHHI	GCGC	2 cut(s)	1017, 2609
BstMAI	GTCTC	3 cut(s)	310, 1366, 2405
BstMWI	GCNNNNNNNGC	4 cut(s)	536, 827, 1601, 2223
BstNI	CCWGG	6 cut(s)	110, 356, 700, 947, 2363, 2473
BstNSI	RCATGY	1 cut(s)	397
BstSCI	CCNGG	6 cut(s)	108, 354, 698, 945, 2361, 2471
BstSFI	CTRYAG	2 cut(s)	1482, 1992
BstUI	CGCG	1 cut(s)	1878
BstV1I	GCAGC	6 cut(s)	15, 49, 652, 808, 830, 2588
BstV2I	GAAGAC	1 cut(s)	1847
BstX2I	RGATCY	3 cut(s)	1155, 1585, 2030
BstXI	CCANNNNNNTGG	2 cut(s)	355, 2693
BstYI	RGATCY	3 cut(s)	1155, 1585, 2030
BstZ17I	GTATAC	1 cut(s)	1414
Bsu15I	ATCGAT	1 cut(s)	2184
Bsu36I	CCTNAGG	1 cut(s)	1590
BsuRI	GGCC	7 cut(s)	413, 522, 1595, 1677, 1780, 2226, 2255
BsuTUI	ATCGAT	1 cut(s)	2184
BtgI	CCRYGG	3 cut(s)	870, 1712, 1788
BtgZI	GCGATG	1 cut(s)	38
BtsCI	GGATG	4 cut(s)	769, 1693, 1798, 2289
BtsI	GCAGTG	1 cut(s)	2028
BtsIMutI	CAGTG	4 cut(s)	684, 1043, 1179, 2028
BtuMI	TCGCGA	1 cut(s)	1878
Cac8I	GCNNGC	6 cut(s)	60, 503, 1314, 1497, 1755, 2224
CaiI	CAGNNNCTG	2 cut(s)	58, 1079
CciI	TCATGA	1 cut(s)	2083
CfoI	GCGC	2 cut(s)	1017, 2609
Cfr13I	GGNCC	6 cut(s)	175, 352, 867, 1676, 1778, 1918
ClaI	ATCGAT	1 cut(s)	2184
CseI	GACGC	1 cut(s)	2201
CsiI	ACCWGGT	1 cut(s)	354
Csp6I	GTAC	5 cut(s)	76, 181, 221, 1331, 2384
CspCI	CAANNNNNGTGG	6 cut(s)	1012, 1047, 2232, 2267, 2610, 2645
CviAII	CATG	7 cut(s)	394, 871, 906, 1713, 1837, 2084, 2294
CviQI	GTAC	5 cut(s)	76, 181, 221, 1331, 2384
DraI	TTTAAA	1 cut(s)	1467
EaeI	YGGCCR	2 cut(s)	520, 2224
Eam1104I	CTCTTC	5 cut(s)	973, 1050, 1130, 2534, 2577
EarI	CTCTTC	5 cut(s)	973, 1050, 1130, 2534, 2577
Eco130I	CCWWGG	5 cut(s)	348, 451, 870, 1712, 2161
Eco147I	AGGCCT	1 cut(s)	1595
Eco24I	GRGCYC	1 cut(s)	194
Eco32I	GATATC	1 cut(s)	2092
Eco47I	GGWCC	4 cut(s)	175, 352, 867, 1918
Eco57I	CTGAAG	2 cut(s)	1665, 1779
Eco81I	CCTNAGG	1 cut(s)	1590
Eco88I	CYCGRG	2 cut(s)	374, 492
EcoO109I	RGGNCCY	2 cut(s)	352, 1918
EcoRI	GAATTC	1 cut(s)	2287
EcoRII	CCWGG	6 cut(s)	108, 354, 698, 945, 2361, 2471
EcoRV	GATATC	1 cut(s)	2092
EcoT14I	CCWWGG	5 cut(s)	348, 451, 870, 1712, 2161
EcoT38I	GRGCYC	1 cut(s)	194
ErhI	CCWWGG	5 cut(s)	348, 451, 870, 1712, 2161
FaeI	CATG	7 cut(s)	397, 874, 909, 1716, 1840, 2087, 2297
FalI	AAGNNNNNCTT	4 cut(s)	1479, 1511, 2373, 2405
FaqI	GGGAC	3 cut(s)	643, 889, 1931
FatI	CATG	7 cut(s)	393, 870, 905, 1712, 1836, 2083, 2293
FauI	CCCGC	2 cut(s)	91, 426
FauNDI	CATATG	2 cut(s)	1606, 2688
FbaI	TGATCA	1 cut(s)	439
FblI	GTMKAC	1 cut(s)	1413
Fnu4HI	GCNGC	7 cut(s)	29, 63, 666, 819, 822, 2574, 2577
FokI	GGATG	4 cut(s)	776, 1700, 1805, 2296
FriOI	GRGCYC	1 cut(s)	194
Fsp4HI	GCNGC	7 cut(s)	29, 63, 666, 819, 822, 2574, 2577
FspBI	CTAG	5 cut(s)	452, 1194, 1313, 2034, 2639
GlaI	GCGC	2 cut(s)	1016, 2608
GluI	GCNGC	7 cut(s)	29, 63, 666, 819, 822, 2574, 2577
GsuI	CTGGAG	2 cut(s)	699, 2345
HaeII	RGCGCY	1 cut(s)	2610
HaeIII	GGCC	7 cut(s)	413, 522, 1595, 1677, 1780, 2226, 2255
HapII	CCGG	2 cut(s)	366, 613
HgaI	GACGC	1 cut(s)	2201
HhaI	GCGC	2 cut(s)	1017, 2609
Hin1I	GRCGYC	2 cut(s)	153, 2212
Hin1II	CATG	7 cut(s)	397, 874, 909, 1716, 1840, 2087, 2297
Hin6I	GCGC	2 cut(s)	1015, 2607
HinP1I	GCGC	2 cut(s)	1015, 2607
HincII	GTYRAC	3 cut(s)	371, 943, 2614
HindII	GTYRAC	3 cut(s)	371, 943, 2614
HindIII	AAGCTT	3 cut(s)	537, 1099, 1493
HpaII	CCGG	2 cut(s)	366, 613
HphI	GGTGA	4 cut(s)	741, 1654, 2393, 2608
Hpy99I	CGWCG	6 cut(s)	97, 152, 155, 158, 410, 2217
HpyAV	CCTTC	8 cut(s)	1418, 1481, 2141, 2192, 2264, 2266, 2331, 2558
HpyCH4III	ACNGT	8 cut(s)	54, 172, 1038, 1183, 1330, 1630, 1666, 2125
HpyCH4IV	ACGT	4 cut(s)	123, 153, 186, 228
HpyF10VI	GCNNNNNNNGC	4 cut(s)	536, 827, 1601, 2223
HpySE526I	ACGT	4 cut(s)	123, 153, 186, 228
Hsp92I	GRCGYC	2 cut(s)	153, 2212
Hsp92II	CATG	7 cut(s)	397, 874, 909, 1716, 1840, 2087, 2297
HspAI	GCGC	2 cut(s)	1015, 2607
Ksp22I	TGATCA	1 cut(s)	439
LmnI	GCTCC	5 cut(s)	197, 368, 1750, 2070, 2245
Lsp1109I	GCAGC	6 cut(s)	15, 49, 652, 808, 830, 2588
LweI	GCATC	7 cut(s)	15, 466, 677, 1201, 1659, 1705, 2052
MabI	ACCWGGT	1 cut(s)	354
MaeI	CTAG	5 cut(s)	452, 1194, 1313, 2034, 2639
MaeII	ACGT	4 cut(s)	123, 153, 186, 228
MaeIII	GTNAC	7 cut(s)	747, 841, 1177, 1256, 1324, 1525, 2491
MfeI	CAATTG	1 cut(s)	1938
MflI	RGATCY	3 cut(s)	1155, 1585, 2030
MhlI	GDGCHC	3 cut(s)	194, 1755, 2242
MlsI	TGGCCA	2 cut(s)	522, 2226
MluNI	TGGCCA	2 cut(s)	522, 2226
MlyI	GAGTC	5 cut(s)	230, 481, 810, 998, 2594
MmeI	TCCRAC	3 cut(s)	219, 1112, 2173
Mox20I	TGGCCA	2 cut(s)	522, 2226
MscI	TGGCCA	2 cut(s)	522, 2226
MseI	TTAA	7 cut(s)	165, 1250, 1466, 1509, 1887, 1962, 2153
MslI	CAYNNNNRTG	3 cut(s)	398, 1667, 2691
Msp20I	TGGCCA	2 cut(s)	522, 2226
MspA1I	CMGCKG	3 cut(s)	821, 1532, 2222
MspCI	CTTAAG	1 cut(s)	164
MspI	CCGG	2 cut(s)	366, 613
MspR9I	CCNGG	6 cut(s)	110, 356, 700, 947, 2363, 2473
MunI	CAATTG	1 cut(s)	1938
Mva1269I	GAATGC	1 cut(s)	296
MvaI	CCWGG	6 cut(s)	110, 356, 700, 947, 2363, 2473
MvnI	CGCG	1 cut(s)	1878
MwoI	GCNNNNNNNGC	4 cut(s)	536, 827, 1601, 2223
NcoI	CCATGG	2 cut(s)	870, 1712
NdeI	CATATG	2 cut(s)	1606, 2688
NheI	GCTAGC	1 cut(s)	1312
NlaIII	CATG	7 cut(s)	397, 874, 909, 1716, 1840, 2087, 2297
NlaIV	GGNNCC	5 cut(s)	135, 193, 1157, 1919, 2698
NmuCI	GTSAC	4 cut(s)	747, 841, 1177, 2491
NruI	TCGCGA	1 cut(s)	1878
NspI	RCATGY	1 cut(s)	397
PaeR7I	CTCGAG	2 cut(s)	374, 492
PagI	TCATGA	1 cut(s)	2083
PceI	AGGCCT	1 cut(s)	1595
PcsI	WCGNNNNNNNCGW	1 cut(s)	2415
PctI	GAATGC	1 cut(s)	296
PfeI	GAWTC	6 cut(s)	268, 569, 1190, 1865, 1894, 2181
PflFI	GACNNNGTC	3 cut(s)	152, 239, 356
PflMI	CCANNNNNTGG	4 cut(s)	1004, 1308, 1340, 1943
PfoI	TCCNGGA	2 cut(s)	108, 2361
PkrI	GCNGC	7 cut(s)	30, 64, 667, 820, 823, 2575, 2578
PleI	GAGTC	5 cut(s)	230, 481, 809, 997, 2593
PpsI	GAGTC	5 cut(s)	230, 481, 809, 997, 2593
Ppu21I	YACGTR	1 cut(s)	187
PpuMI	RGGWCCY	2 cut(s)	352, 1918
PshBI	ATTAAT	1 cut(s)	1962
PsiI	TTATAA	1 cut(s)	1637
Psp1406I	AACGTT	1 cut(s)	123
Psp5II	RGGWCCY	2 cut(s)	352, 1918
Psp6I	CCWGG	6 cut(s)	108, 354, 698, 945, 2361, 2471
PspGI	CCWGG	6 cut(s)	108, 354, 698, 945, 2361, 2471
PspN4I	GGNNCC	5 cut(s)	135, 193, 1157, 1919, 2698
PspPI	GGNCC	6 cut(s)	175, 352, 867, 1676, 1778, 1918
PspPPI	RGGWCCY	2 cut(s)	352, 1918
PspXI	VCTCGAGB	2 cut(s)	374, 492
PstI	CTGCAG	1 cut(s)	1486
PstNI	CAGNNNCTG	2 cut(s)	58, 1079
PsuI	RGATCY	3 cut(s)	1155, 1585, 2030
PsyI	GACNNNGTC	3 cut(s)	152, 239, 356
PvuII	CAGCTG	2 cut(s)	821, 2222
RruI	TCGCGA	1 cut(s)	1878
RsaI	GTAC	5 cut(s)	77, 182, 222, 1332, 2385
RsaNI	GTAC	5 cut(s)	76, 181, 221, 1331, 2384
RseI	CAYNNNNRTG	3 cut(s)	398, 1667, 2691
SaqAI	TTAA	7 cut(s)	165, 1250, 1466, 1509, 1887, 1962, 2153
SatI	GCNGC	7 cut(s)	29, 63, 666, 819, 822, 2574, 2577
Sau96I	GGNCC	6 cut(s)	175, 352, 867, 1676, 1778, 1918
ScaI	AGTACT	2 cut(s)	182, 2385
SchI	GAGTC	5 cut(s)	230, 481, 810, 998, 2594
ScrFI	CCNGG	6 cut(s)	110, 356, 700, 947, 2363, 2473
SduI	GDGCHC	3 cut(s)	194, 1755, 2242
SexAI	ACCWGGT	1 cut(s)	354
SfaNI	GCATC	7 cut(s)	15, 466, 677, 1201, 1659, 1705, 2052
SfcI	CTRYAG	2 cut(s)	1482, 1992
Sfr274I	CTCGAG	2 cut(s)	374, 492
SinI	GGWCC	4 cut(s)	175, 352, 867, 1918
SlaI	CTCGAG	2 cut(s)	374, 492
SmiMI	CAYNNNNRTG	3 cut(s)	398, 1667, 2691
SmlI	CTYRAG	5 cut(s)	164, 374, 492, 632, 1363
SmoI	CTYRAG	5 cut(s)	164, 374, 492, 632, 1363
SseBI	AGGCCT	1 cut(s)	1595
SsiI	CCGC	7 cut(s)	38, 98, 419, 1298, 1532, 1891, 2574
SspI	AATATT	1 cut(s)	1307
SspMI	CTAG	5 cut(s)	452, 1194, 1313, 2034, 2639
StuI	AGGCCT	1 cut(s)	1595
StyD4I	CCNGG	6 cut(s)	108, 354, 698, 945, 2361, 2471
StyI	CCWWGG	5 cut(s)	348, 451, 870, 1712, 2161
TaaI	ACNGT	8 cut(s)	54, 172, 1038, 1183, 1330, 1630, 1666, 2125
TaiI	ACGT	4 cut(s)	126, 156, 189, 231
TaqI	TCGA	8 cut(s)	208, 375, 493, 567, 1390, 1397, 1897, 2184
TaqII	GACCGA	1 cut(s)	1633
TatI	WGTACW	4 cut(s)	75, 180, 220, 2383
TauI	GCSGC	1 cut(s)	2576
TfiI	GAWTC	6 cut(s)	268, 569, 1190, 1865, 1894, 2181
Tru1I	TTAA	7 cut(s)	165, 1250, 1466, 1509, 1887, 1962, 2153
Tru9I	TTAA	7 cut(s)	165, 1250, 1466, 1509, 1887, 1962, 2153
TscAI	CASTG	4 cut(s)	691, 1043, 1186, 2028
TseFI	GTSAC	4 cut(s)	747, 841, 1177, 2491
TseI	GCWGC	6 cut(s)	28, 62, 665, 818, 821, 2576
Tsp45I	GTSAC	4 cut(s)	747, 841, 1177, 2491
TspGWI	ACGGA	2 cut(s)	1024, 1168
TspRI	CASTG	4 cut(s)	691, 1043, 1186, 2028
Tth111I	GACNNNGTC	3 cut(s)	152, 239, 356
Van91I	CCANNNNNTGG	4 cut(s)	1004, 1308, 1340, 1943
Vha464I	CTTAAG	1 cut(s)	164
VpaK11BI	GGWCC	4 cut(s)	175, 352, 867, 1918
VspI	ATTAAT	1 cut(s)	1962
XapI	RAATTY	7 cut(s)	901, 926, 1028, 1234, 1971, 1997, 2287
XceI	RCATGY	1 cut(s)	397
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1940
XhoI	CTCGAG	2 cut(s)	374, 492
XmaJI	CCTAGG	1 cut(s)	451
XmiI	GTMKAC	1 cut(s)	1413
XspI	CTAG	5 cut(s)	452, 1194, 1313, 2034, 2639
ZraI	GACGTC	1 cut(s)	154
ZrmI	AGTACT	2 cut(s)	182, 2385

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.