Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0012183

Physical Location & Seq

Genomic Coordinates Forward (+)

5461924 .. 5468042

Gene Structure 6119 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g05080.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3555 bp

ATGACCTCAAACCGGCCTCTTCTGATCCCATCTCCCAGAACACCCGACTCCCACCCGGCAAAACCCACCATGGATGTCTCCGAAAACCCAGAACCCAATACAAGTTTGAATATTTCTTCTTCTTCAAGACGCAGCCTTTCTTCCTCCTCCATTCAATCCAAGCCGTCCATCCGCTACGGTTCCAGAGGCGCTGATTCCGAGGCCGCGGCGTCCCAGAAGGAGATGAACGACGAGGATGTGAGGATGATCCATATCAACGACACCCATGAAAGGTTTGAGTTTTCTGGCAATTCTATAAGGACCACAAAGTACTCGATCATCACTTTCTTGCCTAGGAATTTGTTTGAACAGTTTCATAGAGTAGCCTATCTCTACTTTCTAGTCATTGCTGTGCTCAATCAGCTCCCCCAGCTCGCTGTTTTCGGCCGGGGAGTTTCTGTTCTGCCATTAGCGTTTGTCTTGTTAGTTACTGCTGTTAAGGATGCCTATGAGGACTACAGGAGGCATCGCTCCGACCGCATTGAGAACAATCGTCTCGCTTCTGTTTTTGTTAACAATCACTTTCAGTTCAAGAAGTGGAAGGATGTGCAAGTTGGTGAGATCATCAGGATTGAAGCAAATGAGGGCATTCCTTGTGATATGGTTCTGCTCTCCACCAGTGACCCCACTGGTGTTGCTTATGTGCAGACCATCAATTTGGATGGGGAGTCCAATTTGAAGACCCGCTATGCCAAGCAAGAAACCCTCTCCAAGTTGCCTGAAAAGGACAGGATCACCGGGTTGATCAAGTGTGAGAAACCCAACAGGAACATTTATGGATTTCAGGCATTCATGGAGATTGATGGCAAACGACTCTCATTAGGTCCCTCCAACATCGTACTTCGCGGCTGTGAGCTTAAGAATACTCATTGGGCCCTCGGGGTGGCTGTATATGCTGGTCGTGAGACCAAAGTTATGCTCAATAGCTCCGGAGCCCCATCCAAGAGGAGTCGTCTCGAGACCCGTATGAACTACGAGATCATCACCCTCTCGCTGTTTCTTGTTGTCTTGTGTTCAATTGTTTCTCTGTGTGCTGCTGTTTGGTTGAAGCGCGAAAATGATAATTTGGAAGACATACTTTTCTACAGGAAGAAGGACTACTCTGAAGATAAAGTCAAGAATTATAAATATTATGGATGGGGATTAGAGATTGTTTTCACGTTCCTCATGTCTATTATTGTCTTCCAGGTCATGATCCCCATCTCTTTGTACATTTCTATGGAGCTTGTCCGGGTCGGTCAGGCTTACTTCATGATACGAGATAGTCATATGTATGATGAGGCTTCTAATGCAAGATTCCAGTGCAGAGCTTTGAATATAAATGAAGATTTAGGACAAATTAAGTATGTATTCTCCGACAAAACTGGTACACTTACCGAGAACAAAATGGAATTCCAATGTGCAAGCATTTGGGGAGTTGATTATAATGGTGGGAGAGGCAGTTTGGAAAAGGACCAGTTGGAACACAATGTTCAAATCGATGGAATTGTTTTGAGGCCAAAGATGAAGGTAAAGGCTGACCCAGATCTTCTACGACTACTAAAAAGTGAAAAAGACACAAATGAAGGCAAACATGTGCACGAGTTCTTCCTTGCTTTGGCAGCTTGTAATACTATTGTGCCTCTAGTTACAGACTCGTCTGATCGAAATGTGAGATTGATTGATTACCAAGGGGAGTCTCCAGATGAACAAGCATTAGTTTATGCCGCCGCTGCCTATGGTTTTATGCTTATTGAAAGAACGTCCGGTCATATAACTATCGATATCCAAGGAGAAAGGCAAAGGTTCAGTGTTCTTGGTTTGCATGAATTTGACAGTGACCGAAAGAGAATGTCAGTGATATTGGGGTGTCCTGATAAAACCGTGAAAGTGTTTGTAAAAGGTGCTGACACTACCATGTTCAGTGTAACAGACAAAAGGTTGAACTTGAACATAATACGAGCAACAGAAGCCCATATTCATGCTTATTCCTCTCTGGGTTTAAGAACACTTGTTGTGGGGATGAGAGCATTGACTGCTTCAGAATTTGAGCAGTGGCACTCTTCTTTTGAAGCAGCAAGCACTGCTTTGATTGGGAGAGCTGCTCTGCTTCGCAAGGTTGCTGGCAACATAGAGAACAATCTTATCATTTTAGGTGCCTCTGGTATTGAAGACAAACTGCAACTAGGGGTGCCTGAAGCCATAGATTCTCTAAGAACTGCAGGGGTTCAGGTGTGGGTTTTGACGGGGGACAAGCAAGAAACTGCCATATCAATTGGCTACTCCTCAAAGCTTCTTACAAGGAGAATGGCCCAGGTTTTAATTAATAGCAGCTCTAAGGAGTCATGTAGAAGGAGTTTGGAAGATGCCATACTCATGTCTAAGAAGCTCGTGAATGTGTCTGGCGATGAACACAGTATCCGAGGAAGTTCTGGAGATGGTATGTCTTCAGTAGCTTTAATTATCGATGGTACCAGCCTTGTTTATATTCTTGACAGTGAACTTGAGGAAAAGCTCTTTGAATTAGCAAATAGATGTTCTGTGGTGCTTTGCTGCCGAGTAGCTCCTCTGCAAAAAGCTGGAATTGTTGCCCTTGTAAAAAACCGGACTACTGATATGACACTTGCCATTGGGGATGGTGCAAATGATGTTTCGATGATCCAAATGGCTGATGTTGGAGTTGGAATCAGTGGCCAAGAGGGTCGACAAGCTGTCATGGCTTCAGATTTTGCAATGGGGCAGTTTAGATTCTTAGTTCCCCTTTTATTGGTGCATGGGCATTGGAATTACCAGCGCATGGGCTACATGATATTATACAACTTTTATAGGAATGCTGTGTTTGTTCTTATTCTGTTTTGGTATGTGCTCTTTACTTGTTTTACACTGACAACCGCAATCACTGAATGGAGCAGCATGTTATATTCTATAATCTACACTGCAGTACCTACAATAGTTGTTGGGGTTCTTGACAAGGACCTAAGTAGAATGACCCTCTTAACATATCCTCAGCTGTATGGAGCTGGTCATAGACAAGAGTGCTATAACACGAAATTATTTTGGCTAACAATGCTCGACACATTGTGGCAAAGTGTGGCTGTCTTCTTTATCCCCCTCTTTGCCTTTTGGGGTAGCACCATCGATACCTCAAGTATAGGAGATCTTTGGACTCTTTCGGTGGTTATATTGGTGAATTTACACTTGGCTATGGATGTTATTCGCTGGAGTTGGATTACACATGCAGCTATTTGGGGATCTATCTTTGCAACTTGGATTTGTGTCATTGTGATTGATGCTATACCTTCACTGGTTGGCTACTGGGCCATTTTTGATGTCATGAAGACAGGACCGTTTTGGTTATGTTTGCTTGCGATCATCATAGCAGCAGTCACTCCTCGTTTTTGTGTAAAGTTTCTTTGTCAGTATTATAGTCCGTGTGATGTTCAGATTGCAAGAGAGGGGGAGAAGTTTGGCAATTTGAGGGTGTCAAGTCCTGTACAGATAGAAATGAATCCAATCATGGAACACCCAAGGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004012 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0008150 GO:0009987 GO:0010876 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0033036 GO:0034204 GO:0042623 GO:0043492 GO:0044464 GO:0045332 GO:0051179 GO:0051234 GO:0061024 GO:0065007 GO:0065008 GO:0071702 GO:0071840 GO:0071944 GO:0097035

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase E1-E2_ATPase PhoLip_ATPase_C PhoLip_ATPase_N

Protein Analysis

1185

Amino Acids

133.16

Weight (kDa)

7.28

Isoelectric Point (pI)

37.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PhoLip_ATPase_N	PF16209	83 - 145	2.9e-24	Phospholipid-translocating ATPase N-terminal
Cation_ATPase	PF13246	541 - 734	6.5e-14	P-type ATPase, cytoplasmic domain N
PhoLip_ATPase_C	PF16212	911 - 1150	1.6e-73	Phospholipid-translocating P-type ATPase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0012183)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04930
fragaria_vesca	FvH4_7g05080 FvH4_7g05080
malus_domestica	MD02G1263000.v1.1 MD07G1054900.v1.1
prunus_persica	Prupe.2G061800_v2.0.a1
pyrus_communis	pycom02g22540 pycom07g04270
rosa_chinensis	RchiOBHm_Chr1g0331371
rosa_laevigata	RLG00000029738
rosa_multiflora	Rmu_sc0005956.1_g000004
rosa_roxburghii	Rroxscaffold_4G00319160
rosa_rugosa	Rorug01G0092900 Rorug01G0092900
rosa_samantha	Rh1AG117900 Rh1BG088700 Rh1CG112800
rosa_wichuraiana	Rw0G002870 Rw1G009440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1164, 1464
Acc65I	GGTACC	1 cut(s)	2489
AccB1I	GGYRCC	3 cut(s)	2174, 2209, 2489
AccB7I	CCANNNNNTGG	1 cut(s)	2815
AccI	GTMKAC	1 cut(s)	2722
AccII	CGCG	3 cut(s)	206, 885, 1092
AccIII	TCCGGA	1 cut(s)	968
AciI	CCGC	9 cut(s)	172, 204, 206, 517, 724, 885, 1746, 1749, 2910
AclWI	GGATC	6 cut(s)	19, 241, 779, 1228, 2671, 3277
AcoI	YGGCCR	2 cut(s)	424, 2710
AcsI	RAATTY	5 cut(s)	337, 1430, 1847, 2063, 3208
AcuI	CTGAAG	5 cut(s)	1164, 2043, 2235, 2451, 2724
AcyI	GRCGYC	1 cut(s)	209
AdeI	CACNNNGTG	1 cut(s)	3099
AfaI	GTAC	7 cut(s)	311, 879, 1250, 1408, 2491, 2961, 3513
AfiI	CCNNNNNNNGG	6 cut(s)	12, 270, 922, 1636, 2785, 2815
AflII	CTTAAG	1 cut(s)	896
AflIII	ACRYGT	1 cut(s)	1612
AhdI	GACNNNNNGTC	1 cut(s)	2729
AjnI	CCWGG	2 cut(s)	1224, 2331
AjuI	GAANNNNNNNTTGG	2 cut(s)	3200, 3232
AloI	GAACNNNNNNTCC	4 cut(s)	423, 455, 2421, 2453
Alw21I	GWGCWC	3 cut(s)	396, 1620, 2886
Alw26I	GTCTC	6 cut(s)	82, 539, 938, 992, 998, 1722
Alw44I	GTGCAC	1 cut(s)	1616
AlwI	GGATC	6 cut(s)	19, 241, 779, 1228, 2671, 3277
Ama87I	CYCGRG	2 cut(s)	917, 995
Aor13HI	TCCGGA	1 cut(s)	968
AoxI	GGCC	8 cut(s)	14, 201, 424, 912, 1535, 2328, 2710, 3336
ApaI	GGGCCC	1 cut(s)	916
ApaLI	GTGCAC	1 cut(s)	1616
ApoI	RAATTY	5 cut(s)	337, 1430, 1847, 2063, 3208
ArsI	GACNNNNNNTTYG	2 cut(s)	679, 711
AseI	ATTAAT	1 cut(s)	2343
Asp700I	GAANNNNTTC	1 cut(s)	351
Asp718I	GGTACC	1 cut(s)	2489
AspA2I	CCTAGG	1 cut(s)	332
AspLEI	GCGC	3 cut(s)	191, 1092, 2814
AspS9I	GGNCC	9 cut(s)	300, 863, 912, 913, 1492, 2329, 2992, 3336, 3362
AsuC2I	CCSGG	4 cut(s)	56, 428, 778, 1271
AsuHPI	GGTGA	4 cut(s)	608, 766, 1015, 3217
AvaI	CYCGRG	2 cut(s)	917, 995
AvaII	GGWCC	5 cut(s)	300, 863, 1492, 2992, 3362
AvrII	CCTAGG	1 cut(s)	332
BaeGI	GKGCMC	2 cut(s)	916, 1620
BaeI	ACNNNNGTAYC	2 cut(s)	2943, 2976
BalI	TGGCCA	1 cut(s)	2712
BanI	GGYRCC	3 cut(s)	2174, 2209, 2489
BanII	GRGCYC	2 cut(s)	916, 976
BarI	GAAGNNNNNNTAC	4 cut(s)	1121, 1153, 2373, 2405
BauI	CACGAG	2 cut(s)	1619, 2408
BbsI	GAAGAC	7 cut(s)	725, 1116, 1213, 2196, 2457, 3109, 3362
Bbv12I	GWGCWC	3 cut(s)	396, 1620, 2886
BbvCI	CCTCAGC	1 cut(s)	3024
BceAI	ACGGC	1 cut(s)	148
BciT130I	CCWGG	2 cut(s)	1226, 2333
BciVI	GTATCC	1 cut(s)	2447
BclI	TGATCA	1 cut(s)	783
BcnI	CCSGG	4 cut(s)	56, 428, 778, 1271
BcoDI	GTCTC	6 cut(s)	82, 539, 938, 992, 998, 1722
BfaI	CTAG	4 cut(s)	333, 380, 1664, 2204
BfmI	CTRYAG	4 cut(s)	496, 1123, 2238, 2955
BfoI	RGCGCY	1 cut(s)	192
BfrI	CTTAAG	1 cut(s)	896
BfuI	GTATCC	1 cut(s)	2447
BglII	AGATCT	2 cut(s)	1564, 3175
BlnI	CCTAGG	1 cut(s)	332
BmcAI	AGTACT	1 cut(s)	311
Bme1390I	CCNGG	6 cut(s)	56, 428, 778, 1226, 1271, 2333
Bme18I	GGWCC	5 cut(s)	300, 863, 1492, 2992, 3362
BmeRI	GACNNNNNGTC	1 cut(s)	2729
BmeT110I	CYCGRG	2 cut(s)	917, 995
BmgT120I	GGNCC	9 cut(s)	300, 863, 912, 913, 1492, 2329, 2992, 3336, 3362
BmiI	GGNNCC	7 cut(s)	181, 865, 914, 973, 2176, 2211, 2491
BmrFI	CCNGG	6 cut(s)	56, 428, 778, 1226, 1271, 2333
BmrI	ACTGGG	1 cut(s)	3343
BmsI	GCATC	4 cut(s)	472, 514, 2374, 3298
BmuI	ACTGGG	1 cut(s)	3343
BpiI	GAAGAC	7 cut(s)	725, 1116, 1213, 2196, 2457, 3109, 3362
BplI	GAGNNNNNCTC	2 cut(s)	2107, 2139
BpmI	CTGGAG	3 cut(s)	1704, 2472, 3259
Bpu10I	CCTNAGC	1 cut(s)	3024
BpuEI	CTTGAG	2 cut(s)	2543, 3148
BpuMI	CCSGG	4 cut(s)	56, 428, 778, 1271
Bsa29I	ATCGAT	4 cut(s)	1518, 1800, 2484, 3156
BsaBI	GATNNNNATC	2 cut(s)	251, 1238
BsaHI	GRCGYC	1 cut(s)	209
BsaI	GGTCTC	2 cut(s)	938, 992
BsaWI	WCCGGW	3 cut(s)	968, 1784, 2622
BsaXI	ACNNNNNCTCC	4 cut(s)	423, 453, 1465, 1495
Bsc4I	CCNNNNNNNGG	6 cut(s)	12, 270, 922, 1636, 2785, 2815
Bse118I	RCCGGY	1 cut(s)	12
Bse1I	ACTGG	7 cut(s)	657, 673, 1339, 1408, 1495, 3327, 3338
Bse3DI	GCAATG	2 cut(s)	384, 2757
Bse8I	GATNNNNATC	2 cut(s)	251, 1238
BseAI	TCCGGA	1 cut(s)	968
BseBI	CCWGG	2 cut(s)	1226, 2333
BseCI	ATCGAT	4 cut(s)	1518, 1800, 2484, 3156
BseJI	GATNNNNATC	2 cut(s)	251, 1238
BseLI	CCNNNNNNNGG	6 cut(s)	12, 270, 922, 1636, 2785, 2815
BseMI	GCAATG	2 cut(s)	384, 2757
BseMII	CTCAG	1 cut(s)	3038
BseNI	ACTGG	7 cut(s)	657, 673, 1339, 1408, 1495, 3327, 3338
BseRI	GAGGAG	5 cut(s)	136, 1000, 2293, 2574, 3399
BseSI	GKGCMC	2 cut(s)	916, 1620
BseX3I	CGGCCG	1 cut(s)	424
BseYI	CCCAGC	1 cut(s)	408
BsgI	GTGCAG	2 cut(s)	704, 1363
Bsh1236I	CGCG	3 cut(s)	206, 885, 1092
Bsh1285I	CGRYCG	2 cut(s)	427, 517
BshFI	GGCC	8 cut(s)	16, 203, 426, 914, 1537, 2330, 2712, 3338
BshNI	GGYRCC	3 cut(s)	2174, 2209, 2489
BshVI	ATCGAT	4 cut(s)	1518, 1800, 2484, 3156
BsiEI	CGRYCG	2 cut(s)	427, 517
BsiHKAI	GWGCWC	3 cut(s)	396, 1620, 2886
BsiHKCI	CYCGRG	2 cut(s)	917, 995
BsiSI	CCGG	8 cut(s)	13, 56, 427, 777, 969, 1270, 1785, 2623
BslFI	GGGAC	3 cut(s)	196, 849, 2282
BslI	CCNNNNNNNGG	6 cut(s)	12, 270, 922, 1636, 2785, 2815
BsmAI	GTCTC	6 cut(s)	82, 539, 938, 992, 998, 1722
BsmBI	CGTCTC	2 cut(s)	539, 998
BsmFI	GGGAC	3 cut(s)	196, 849, 2282
BsmI	GAATGC	3 cut(s)	627, 827, 2854
BsnI	GGCC	8 cut(s)	16, 203, 426, 914, 1537, 2330, 2712, 3338
Bso31I	GGTCTC	2 cut(s)	938, 992
BsoBI	CYCGRG	2 cut(s)	917, 995
Bsp120I	GGGCCC	1 cut(s)	912
Bsp1286I	GDGCHC	5 cut(s)	396, 916, 976, 1620, 2886
Bsp13I	TCCGGA	1 cut(s)	968
Bsp1407I	TGTACA	2 cut(s)	1248, 3511
Bsp19I	CCATGG	1 cut(s)	69
BspACI	CCGC	9 cut(s)	172, 204, 206, 517, 724, 885, 1746, 1749, 2910
BspANI	GGCC	8 cut(s)	16, 203, 426, 914, 1537, 2330, 2712, 3338
BspCNI	CTCAG	1 cut(s)	3037
BspDI	ATCGAT	4 cut(s)	1518, 1800, 2484, 3156
BspEI	TCCGGA	1 cut(s)	968
BspFNI	CGCG	3 cut(s)	206, 885, 1092
BspHI	TCATGA	3 cut(s)	1230, 1290, 3351
BspLI	GGNNCC	7 cut(s)	181, 865, 914, 973, 2176, 2211, 2491
BspMAI	CTGCAG	2 cut(s)	2242, 2959
BspPI	GGATC	6 cut(s)	19, 241, 779, 1228, 2671, 3277
BspT107I	GGYRCC	3 cut(s)	2174, 2209, 2489
BspTI	CTTAAG	1 cut(s)	896
BspTNI	GGTCTC	2 cut(s)	938, 992
BsrDI	GCAATG	2 cut(s)	384, 2757
BsrFI	RCCGGY	1 cut(s)	12
BsrGI	TGTACA	2 cut(s)	1248, 3511
BsrI	ACTGG	7 cut(s)	657, 673, 1339, 1408, 1495, 3327, 3338
BssAI	RCCGGY	1 cut(s)	12
BssNI	GRCGYC	1 cut(s)	209
BssSI	CACGAG	2 cut(s)	1619, 2408
BssT1I	CCWWGG	5 cut(s)	69, 332, 1708, 1807, 3545
Bst2BI	CACGAG	2 cut(s)	1619, 2408
Bst2UI	CCWGG	2 cut(s)	1226, 2333
Bst4CI	ACNGT	7 cut(s)	179, 351, 1856, 1903, 2435, 2516, 3366
Bst6I	CTCTTC	2 cut(s)	24, 2086
BstACI	GRCGYC	1 cut(s)	209
BstAFI	CTTAAG	1 cut(s)	896
BstAPI	GCANNNNNTGC	2 cut(s)	2054, 2102
BstAUI	TGTACA	2 cut(s)	1248, 3511
BstC8I	GCNNGC	5 cut(s)	414, 1444, 2098, 2143, 3384
BstDEI	CTNAG	6 cut(s)	2231, 2355, 2400, 2770, 2996, 3024
BstDSI	CCRYGG	2 cut(s)	69, 204
BstFNI	CGCG	3 cut(s)	206, 885, 1092
BstH2I	RGCGCY	1 cut(s)	192
BstHHI	GCGC	3 cut(s)	191, 1092, 2814
BstMAI	GTCTC	6 cut(s)	82, 539, 938, 992, 998, 1722
BstMCI	CGRYCG	2 cut(s)	427, 517
BstNI	CCWGG	2 cut(s)	1226, 2333
BstNSI	RCATGY	3 cut(s)	1616, 2935, 3257
BstSCI	CCNGG	6 cut(s)	54, 426, 776, 1224, 1269, 2331
BstSFI	CTRYAG	4 cut(s)	496, 1123, 2238, 2955
BstSLI	GKGCMC	2 cut(s)	916, 1620
BstUI	CGCG	3 cut(s)	206, 885, 1092
BstV2I	GAAGAC	7 cut(s)	725, 1116, 1213, 2196, 2457, 3109, 3362
BstX2I	RGATCY	3 cut(s)	1564, 3175, 3269
BstXI	CCANNNNNNTGG	1 cut(s)	697
BstYI	RGATCY	3 cut(s)	1564, 3175, 3269
BstZI	CGGCCG	1 cut(s)	424
Bsu15I	ATCGAT	4 cut(s)	1518, 1800, 2484, 3156
BsuI	GTATCC	1 cut(s)	2447
BsuRI	GGCC	8 cut(s)	16, 203, 426, 914, 1537, 2330, 2712, 3338
BsuTUI	ATCGAT	4 cut(s)	1518, 1800, 2484, 3156
BtgI	CCRYGG	2 cut(s)	69, 204
BtgZI	GCGATG	2 cut(s)	491, 2439
BtsI	GCAGTG	3 cut(s)	2078, 2100, 2952
Cac8I	GCNNGC	5 cut(s)	414, 1444, 2098, 2143, 3384
CciI	TCATGA	3 cut(s)	1230, 1290, 3351
CfoI	GCGC	3 cut(s)	191, 1092, 2814
Cfr10I	RCCGGY	1 cut(s)	12
Cfr13I	GGNCC	9 cut(s)	300, 863, 912, 913, 1492, 2329, 2992, 3336, 3362
Cfr42I	CCGCGG	1 cut(s)	207
ClaI	ATCGAT	4 cut(s)	1518, 1800, 2484, 3156
CseI	GACGC	2 cut(s)	138, 198
Csp6I	GTAC	7 cut(s)	310, 878, 1249, 1407, 2490, 2960, 3512
CspCI	CAANNNNNGTGG	2 cut(s)	655, 690
CviQI	GTAC	7 cut(s)	310, 878, 1249, 1407, 2490, 2960, 3512
DdeI	CTNAG	6 cut(s)	2231, 2355, 2400, 2770, 2996, 3024
DraIII	CACNNNGTG	1 cut(s)	3099
DriI	GACNNNNNGTC	1 cut(s)	2729
EaeI	YGGCCR	2 cut(s)	424, 2710
EagI	CGGCCG	1 cut(s)	424
Eam1104I	CTCTTC	2 cut(s)	24, 2086
Eam1105I	GACNNNNNGTC	1 cut(s)	2729
EarI	CTCTTC	2 cut(s)	24, 2086
EclXI	CGGCCG	1 cut(s)	424
Eco130I	CCWWGG	5 cut(s)	69, 332, 1708, 1807, 3545
Eco24I	GRGCYC	2 cut(s)	916, 976
Eco31I	GGTCTC	2 cut(s)	938, 992
Eco32I	GATATC	1 cut(s)	1804
Eco47I	GGWCC	5 cut(s)	300, 863, 1492, 2992, 3362
Eco52I	CGGCCG	1 cut(s)	424
Eco57I	CTGAAG	5 cut(s)	1164, 2043, 2235, 2451, 2724
Eco88I	CYCGRG	2 cut(s)	917, 995
EcoO109I	RGGNCCY	3 cut(s)	863, 913, 2992
EcoRI	GAATTC	1 cut(s)	1430
EcoRII	CCWGG	2 cut(s)	1224, 2331
EcoRV	GATATC	1 cut(s)	1804
EcoT14I	CCWWGG	5 cut(s)	69, 332, 1708, 1807, 3545
EcoT38I	GRGCYC	2 cut(s)	916, 976
ErhI	CCWWGG	5 cut(s)	69, 332, 1708, 1807, 3545
Esp3I	CGTCTC	2 cut(s)	539, 998
FalI	AAGNNNNNCTT	4 cut(s)	1101, 1133, 2089, 2121
FaqI	GGGAC	3 cut(s)	196, 849, 2282
FauI	CCCGC	1 cut(s)	731
FauNDI	CATATG	1 cut(s)	1308
FbaI	TGATCA	1 cut(s)	783
FblI	GTMKAC	1 cut(s)	2722
FriOI	GRGCYC	2 cut(s)	916, 976
FspBI	CTAG	4 cut(s)	333, 380, 1664, 2204
GlaI	GCGC	3 cut(s)	190, 1091, 2813
GsaI	CCCAGC	1 cut(s)	412
GsuI	CTGGAG	3 cut(s)	1704, 2472, 3259
HaeII	RGCGCY	1 cut(s)	192
HaeIII	GGCC	8 cut(s)	16, 203, 426, 914, 1537, 2330, 2712, 3338
HapII	CCGG	8 cut(s)	13, 56, 427, 777, 969, 1270, 1785, 2623
HgaI	GACGC	2 cut(s)	138, 198
HhaI	GCGC	3 cut(s)	191, 1092, 2814
Hin1I	GRCGYC	1 cut(s)	209
Hin6I	GCGC	3 cut(s)	189, 1090, 2812
HinP1I	GCGC	3 cut(s)	189, 1090, 2812
HincII	GTYRAC	2 cut(s)	553, 2723
HindII	GTYRAC	2 cut(s)	553, 2723
HindIII	AAGCTT	1 cut(s)	2309
HpaI	GTTAAC	1 cut(s)	553
HpaII	CCGG	8 cut(s)	13, 56, 427, 777, 969, 1270, 1785, 2623
HphI	GGTGA	4 cut(s)	608, 766, 1015, 3217
Hpy166II	GTNNAC	5 cut(s)	553, 1409, 1618, 2519, 2723
Hpy8I	GTNNAC	5 cut(s)	553, 1409, 1618, 2519, 2723
Hpy99I	CGWCG	1 cut(s)	233
HpyAV	CCTTC	7 cut(s)	211, 574, 1126, 1540, 1598, 2364, 3327
HpyCH4III	ACNGT	7 cut(s)	179, 351, 1856, 1903, 2435, 2516, 3366
HpyCH4IV	ACGT	2 cut(s)	1199, 1781
HpyF3I	CTNAG	6 cut(s)	2231, 2355, 2400, 2770, 2996, 3024
HpySE526I	ACGT	2 cut(s)	1199, 1781
Hsp92I	GRCGYC	1 cut(s)	209
HspAI	GCGC	3 cut(s)	189, 1090, 2812
Kpn2I	TCCGGA	1 cut(s)	968
KpnI	GGTACC	1 cut(s)	2493
Ksp22I	TGATCA	1 cut(s)	783
KspAI	GTTAAC	1 cut(s)	553
KspI	CCGCGG	1 cut(s)	207
LmnI	GCTCC	8 cut(s)	408, 515, 971, 971, 1261, 2587, 2925, 3035
LweI	GCATC	4 cut(s)	472, 514, 2374, 3298
MaeI	CTAG	4 cut(s)	333, 380, 1664, 2204
MaeII	ACGT	2 cut(s)	1199, 1781
MaeIII	GTNAC	6 cut(s)	466, 659, 1666, 1856, 1945, 3403
MfeI	CAATTG	2 cut(s)	1056, 2292
MflI	RGATCY	3 cut(s)	1564, 3175, 3269
MhlI	GDGCHC	5 cut(s)	396, 916, 976, 1620, 2886
MlsI	TGGCCA	1 cut(s)	2712
MluNI	TGGCCA	1 cut(s)	2712
MlyI	GAGTC	8 cut(s)	41, 716, 846, 997, 1667, 1724, 2369, 3178
MmeI	TCCRAC	7 cut(s)	537, 894, 1419, 1479, 2674, 2680, 3224
Mox20I	TGGCCA	1 cut(s)	2712
MroI	TCCGGA	1 cut(s)	968
MroXI	GAANNNNTTC	1 cut(s)	351
MscI	TGGCCA	1 cut(s)	2712
MseI	TTAA	9 cut(s)	477, 552, 897, 1380, 2021, 2339, 2343, 2477, 3014
MslI	CAYNNNNRTG	6 cut(s)	389, 1256, 1311, 1934, 1998, 2393
Msp20I	TGGCCA	1 cut(s)	2712
MspA1I	CMGCKG	3 cut(s)	206, 1751, 3028
MspCI	CTTAAG	1 cut(s)	896
MspI	CCGG	8 cut(s)	13, 56, 427, 777, 969, 1270, 1785, 2623
MspR9I	CCNGG	6 cut(s)	56, 428, 778, 1226, 1271, 2333
MunI	CAATTG	2 cut(s)	1056, 2292
Mva1269I	GAATGC	3 cut(s)	627, 827, 2854
MvaI	CCWGG	2 cut(s)	1226, 2333
MvnI	CGCG	3 cut(s)	206, 885, 1092
NciI	CCSGG	4 cut(s)	56, 428, 778, 1271
NcoI	CCATGG	1 cut(s)	69
NdeI	CATATG	1 cut(s)	1308
NlaIV	GGNNCC	7 cut(s)	181, 865, 914, 973, 2176, 2211, 2491
NmeAIII	GCCGAG	1 cut(s)	2600
NmuCI	GTSAC	3 cut(s)	659, 1856, 3403
NspI	RCATGY	3 cut(s)	1616, 2935, 3257
PacI	TTAATTAA	1 cut(s)	2343
PaeR7I	CTCGAG	1 cut(s)	995
PagI	TCATGA	3 cut(s)	1230, 1290, 3351
PciI	ACATGT	1 cut(s)	1612
PctI	GAATGC	3 cut(s)	627, 827, 2854
PdmI	GAANNNNTTC	1 cut(s)	351
PfeI	GAWTC	6 cut(s)	194, 1335, 2225, 2703, 2766, 3526
PflMI	CCANNNNNTGG	1 cut(s)	2815
PleI	GAGTC	8 cut(s)	41, 715, 846, 996, 1667, 1723, 2368, 3178
PpsI	GAGTC	8 cut(s)	41, 715, 846, 996, 1667, 1723, 2368, 3178
PpuMI	RGGWCCY	2 cut(s)	863, 2992
PscI	ACATGT	1 cut(s)	1612
PshBI	ATTAAT	1 cut(s)	2343
PsiI	TTATAA	2 cut(s)	1164, 1464
Psp5II	RGGWCCY	2 cut(s)	863, 2992
Psp6I	CCWGG	2 cut(s)	1224, 2331
PspFI	CCCAGC	1 cut(s)	408
PspGI	CCWGG	2 cut(s)	1224, 2331
PspN4I	GGNNCC	7 cut(s)	181, 865, 914, 973, 2176, 2211, 2491
PspOMI	GGGCCC	1 cut(s)	912
PspPI	GGNCC	9 cut(s)	300, 863, 912, 913, 1492, 2329, 2992, 3336, 3362
PspPPI	RGGWCCY	2 cut(s)	863, 2992
PstI	CTGCAG	2 cut(s)	2242, 2959
PsuI	RGATCY	3 cut(s)	1564, 3175, 3269
PvuII	CAGCTG	1 cut(s)	3028
RsaI	GTAC	7 cut(s)	311, 879, 1250, 1408, 2491, 2961, 3513
RsaNI	GTAC	7 cut(s)	310, 878, 1249, 1407, 2490, 2960, 3512
RseI	CAYNNNNRTG	6 cut(s)	389, 1256, 1311, 1934, 1998, 2393
SacII	CCGCGG	1 cut(s)	207
SalI	GTCGAC	1 cut(s)	2721
SaqAI	TTAA	9 cut(s)	477, 552, 897, 1380, 2021, 2339, 2343, 2477, 3014
Sau96I	GGNCC	9 cut(s)	300, 863, 912, 913, 1492, 2329, 2992, 3336, 3362
ScaI	AGTACT	1 cut(s)	311
SchI	GAGTC	8 cut(s)	41, 716, 846, 997, 1667, 1724, 2369, 3178
ScrFI	CCNGG	6 cut(s)	56, 428, 778, 1226, 1271, 2333
SduI	GDGCHC	5 cut(s)	396, 916, 976, 1620, 2886
SfaNI	GCATC	4 cut(s)	472, 514, 2374, 3298
SfcI	CTRYAG	4 cut(s)	496, 1123, 2238, 2955
Sfr274I	CTCGAG	1 cut(s)	995
Sfr303I	CCGCGG	1 cut(s)	207
SgrBI	CCGCGG	1 cut(s)	207
SinI	GGWCC	5 cut(s)	300, 863, 1492, 2992, 3362
SlaI	CTCGAG	1 cut(s)	995
SmiMI	CAYNNNNRTG	6 cut(s)	389, 1256, 1311, 1934, 1998, 2393
SmlI	CTYRAG	4 cut(s)	896, 995, 2522, 3163
SmoI	CTYRAG	4 cut(s)	896, 995, 2522, 3163
SsiI	CCGC	9 cut(s)	172, 204, 206, 517, 724, 885, 1746, 1749, 2910
SspI	AATATT	2 cut(s)	112, 1169
SspMI	CTAG	4 cut(s)	333, 380, 1664, 2204
StyD4I	CCNGG	6 cut(s)	54, 426, 776, 1224, 1269, 2331
StyI	CCWWGG	5 cut(s)	69, 332, 1708, 1807, 3545
TaaI	ACNGT	7 cut(s)	179, 351, 1856, 1903, 2435, 2516, 3366
TaiI	ACGT	2 cut(s)	1202, 1784
TaqII	GACCGA	2 cut(s)	1265, 1875
TatI	WGTACW	3 cut(s)	309, 1248, 3511
TauI	GCSGC	5 cut(s)	206, 209, 888, 1748, 1751
TfiI	GAWTC	6 cut(s)	194, 1335, 2225, 2703, 2766, 3526
Tru1I	TTAA	9 cut(s)	477, 552, 897, 1380, 2021, 2339, 2343, 2477, 3014
Tru9I	TTAA	9 cut(s)	477, 552, 897, 1380, 2021, 2339, 2343, 2477, 3014
TseFI	GTSAC	3 cut(s)	659, 1856, 3403
Tsp45I	GTSAC	3 cut(s)	659, 1856, 3403
TspGWI	ACGGA	1 cut(s)	3438
Van91I	CCANNNNNTGG	1 cut(s)	2815
Vha464I	CTTAAG	1 cut(s)	896
VneI	GTGCAC	1 cut(s)	1616
VpaK11BI	GGWCC	5 cut(s)	300, 863, 1492, 2992, 3362
VspI	ATTAAT	1 cut(s)	2343
XapI	RAATTY	5 cut(s)	337, 1430, 1847, 2063, 3208
XceI	RCATGY	3 cut(s)	1616, 2935, 3257
XhoI	CTCGAG	1 cut(s)	995
XmaJI	CCTAGG	1 cut(s)	332
XmiI	GTMKAC	1 cut(s)	2722
XmnI	GAANNNNTTC	1 cut(s)	351
XspI	CTAG	4 cut(s)	333, 380, 1664, 2204
ZrmI	AGTACT	1 cut(s)	311

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.