Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0012183

Physical Location & Seq

Genomic Coordinates Forward (+)

3692699 .. 3698249

Gene Structure 5551 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g04270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3681 bp

ATGACCTCGAAGCGGCCTTTTCTGATCCCATCTCCAAGAACCCCCAATACCCAACACCTCCCTACTCTACCCATCTATTCCGATTTCTTAAATTCCACTTCCGGTGGCTCTGGGTCGTTTTCCGGCATGGGTTCGAGAAACCCAGCTGCAGCTGACAATTCCATCAACGTTGAACCCACCACCCTCAATTCTACCTCCCGTAGAAGCGTTTCTTCCCTTCAATCCAAGGCTTCCCAGAACAATTCTGTTCGGGAAGTGAGTTTGGGCGATGTCGGATCGAAGCCGGTGCGTTATGGTTCGAGAGGAGCTGATTCTGAAGCGCTCAGCATGTCCCAGAAGGAGTTGAACGAGGAGAATGTAAGGGTTGTTTATATAGATGATGTTGCTAAGACAAATGAGAGGTTTGCGTTTTCTGGTAATTCAATTAGGACGGCAAAGTACTCAATTTTTACATTTTTGCCTAGAAATTTGTTTGAACAGTTTCATAGGGTAGCATACATATATTTTCTTGTGATTGCTGTGCTCAATCAGCTCCCCCAGCTGGCGGTTTTTGGCCGTGGAGTTTCCATATTGCCATTGGCATTTGTATTGCTTGTTACTGCTGTTAAGGATGCCTACGAGGACTACAGGCGGCATCGGTCTGATAGAATTGAGAACAATCGTCTGGCATCAGTTTTGGTTGGTAACCAGTTCCAGTCGAAAAAGTGGAAGGATGTTCGAGTTGGTGAAATCATCAAAATTCAAGCAAATGAGGCTATACCTTGTGATATGGTACTGCTTTCGACGAGTGATCCAACTGGGGTTGCTTATGTGCAGACTATCAATTTAGATGGGGAGTCAAATTTGAAGACGCGGTATGCAAAACAAGAAACCCTCTCCAAGTTGTCTGATAAGGAGAAGATTACTGGGTTGATTAAGTGCGAAATTCCCAACAGGAACATATACGGTTTTCACGCATTCATGGAAATTGATGGGAAGCGGTTGTCACTGGGACCCTCTAACATTGTACTTCGAGGGTGTGAGCTTAAGAATACTCAATGGGCACTTGGAGTTGCTGTATATGCCGGTCGTGAGACCAAAGTTATGCTCAATAACTCTGGAGCCCCATCCAAGAGGAGTCGCCTTGAGACCCGTATGAACTCTGAGATCATTATGCTCTCTGGGTTTCTTGTTACTTTGTGTACAGTTGTCTCATTATGTGCTGCTGTTTGGTTGAGACGCAACAATGACAAGTTGGATGACATACTTTTCTACAGGAAGAAGGACTACTCGGAGGAGAAAGTGGACGATTATAACTATTATGGATGGGGTTTGGAGATTCTTTTCACGTTCCTTATGTCTGTCATCGTGTTCCAGGTCATGATCCCCATCTCGTTGTACATTTCGATGGAGCTTGTCCGGGTGGGTCAGGCTTACTTCATGATCAGGGATGGTCAAATGTATGATGAGGCCTCTAATTCAAGATTTCAGTGCCGAGCTTTGAATATCAACGAAGATTTAGGACAAATTAAGTATGTATTCTCAGACAAAACTGGTACGCTGACAGAAAATAAAATGGAATTTCAATGTGCAAGCATTTGGGGAGTAGATTATAATGGTGGGAGAAGCAGTTTGGAGCAAGTGGGGTACTCTGTTGAAGTTGATGGGAAAATTTTGAGGCCAAAGATGAAGGTGCAGGCTGACCCAGAACTTCAGCAATTACTCAGAAGTGGAAAGAACACAAATGAAGGCAAACATGTGTACGAGTTCTTCCTGGCATTGGCAGCTTGTAATACCATTGTGCCTCTTGTTGTAGACACGTCTGATCCAAATGTGGGATTATTAGATTACCAAGGGGAGTCCCCAGATGAACAAGCATTGGTTTATGCTGCTGCTGCCTATGGTTTTATGCTTATTGAACGAACCTCTGGTCATATAATTATTGATATCCAAGGTGATAGGAAAAGGTTCAATGTCTTGGGTTTGCACGAGTTCGATAGTGATCGAAAGAGAATGTCTGTTATATTGGGGTGCCCTGATAAGACTGTCAAAGTCTTTGTAAAAGGTGCTGACACAACCATGTTCAGTGTAATAGACAAACGATTGAACTTGGATATAATACGAGCAACAGAAGCCCATATTCATGCTTACTCCTCTTTGGGTTTGAGAACACTTGTGGTGGGCATGAGAGAACTGAGTGGTACAGAATTCGAGCAGTGGCACTTGTCTTTTGAGGAAGCAAGCACTGCTTTAATTGGTAGGGCTGCTCTACTTCGCAAGGCTGCGGGCAACATAGAAAACAATCTCGTTATACTAGGTGCCTCTGGCATTGAAGATAAACTGCAACTGGGGGTGCCTGAAGCCATAGACTCTCTAAGAACAGCAGGGGTTCAGGTATGGGTTTTGACAGGGGACAAGCAAGAAACTGCCATATCAATCGGCTACTCCTCAAAGCTTCTAACAAGAAGAATGACACAGATTATAATTAACAGTAGCTCTAAGGATTCATGTCGAAGGAGTTTAGAGGATGCCATACTAATGTCTAGGAAGCTCGTGACGGTGTCCGCAGATACACACACCGACGGAGGAAACTCTGGACATGGTGGAACTCAAGTAGCTTTAATTATTGACGGCACCAGCCTTGTGTTCATTCTTGATAGTGAACTTGAGGAAAAGCTCTTTGAACTAGCAAGTAACTGTTCTGTGGTGCTTTGTTGCCGAGTCGCTCCATTGCAAAAGGCTGGAATTGTATCCCTTGTGAAGAACAGGACGACTGATATGACACTTGCCATTGGGGATGGTGCTAATGATGTTTCAATGATCGATCAAATGGCTGATGTGGGAGTTGGCATCAGTGGCCAAGAAGGTCGGCAAGCTGTCATGGCATCAGATTTTGCAATGGGGCAGTTCAGATTCTTAGTTCCCCTTTTATTGGTTCATGGCCATTGGAATTACCAGCGGATGGGCTATATGATATTATACAATTTCTATAGGAATGCAGTGTTTGTTCTTATTTTGTTTTGGTACGTGCTCTTCACTTCTTTTACTTTGACAACTGCAATCACTGAATGGAGCAGCATGTTGTATTCTATAATCTACACAGCAGCACCTACAATTGTTGTTGGGATTCTTGACAAGGACCTAAGTAGAAGGACCCTTCTAGATTATCCTCAGCTATACGGAGCTGGTCAGAGACAAGAATGCTACAACTCAAAATTATTTTGGTTAACGATTCTTGACACATTGTGGCAAAGTCTGGCTGTCTTCTTTATCCCTCTCTTTGCGTATTGGGGCAGCAGCATTGATACATCGAGTATAGGAGATCTTTGGACACTGGCAGTGGTAATTTTGGTTAATTTGCATTTGGCTATGGATGTTATCCGGTGGAATTGGATTACACATGCAGCCATTTGGGGATCTGTAATTGCGACTTGGATTTGTGTCATTGTCATTGATGCTATACCTTCACTGGTTGGCTACTGGGCCATTTTTCAAGTTGCAAAGACTGCATCGTTTTGGTTATGTTTGTTGGCAATCGTCACAGCTGCGATCGCTCCACGCTTTGTTGTGAAGTTTCTGTATCAGTACTATAGACCTTGTGATGTTCAGATTGCAAGAGAATTTGAGAAGTTTGGCAATCCAAGCGCGTCAAACCCTGCACAAATAGAAATGGATGCGATCTTGGACCCGCCGAGGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004012 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0008150 GO:0009987 GO:0010876 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0033036 GO:0034204 GO:0042623 GO:0043492 GO:0044464 GO:0045332 GO:0051179 GO:0051234 GO:0061024 GO:0065007 GO:0065008 GO:0071702 GO:0071840 GO:0071944 GO:0097035

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase E1-E2_ATPase PhoLip_ATPase_C PhoLip_ATPase_N

Protein Analysis

1227

Amino Acids

136.79

Weight (kDa)

6.79

Isoelectric Point (pI)

37.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PhoLip_ATPase_N	PF16209	123 - 189	1e-23	Phospholipid-translocating ATPase N-terminal
Cation_ATPase	PF13246	586 - 775	3.5e-14	P-type ATPase, cytoplasmic domain N
PhoLip_ATPase_C	PF16212	953 - 1192	6.9e-76	Phospholipid-translocating P-type ATPase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012183)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04930
fragaria_vesca	FvH4_7g05080 FvH4_7g05080
malus_domestica	MD02G1263000.v1.1 MD07G1054900.v1.1
prunus_persica	Prupe.2G061800_v2.0.a1
pyrus_communis	pycom02g22540 pycom07g04270
rosa_chinensis	RchiOBHm_Chr1g0331371
rosa_laevigata	RLG00000029738
rosa_multiflora	Rmu_sc0005956.1_g000004
rosa_roxburghii	Rroxscaffold_4G00319160
rosa_rugosa	Rorug01G0092900 Rorug01G0092900
rosa_samantha	Rh1AG117900 Rh1BG088700 Rh1CG112800
rosa_wichuraiana	Rw0G002870 Rw1G009440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	1293, 1593, 2462
AccB1I	GGYRCC	4 cut(s)	2010, 2297, 2332, 2612
AccB7I	CCANNNNNTGG	1 cut(s)	2941
AccI	GTMKAC	1 cut(s)	1794
AccII	CGCG	2 cut(s)	853, 3626
AciI	CCGC	9 cut(s)	13, 545, 631, 853, 979, 2264, 2544, 2938, 3668
AclI	AACGTT	1 cut(s)	168
AclWI	GGATC	6 cut(s)	19, 283, 785, 1357, 1799, 3403
AcoI	YGGCCR	3 cut(s)	553, 2836, 2920
AcsI	RAATTY	9 cut(s)	91, 466, 738, 841, 924, 1559, 1650, 2186, 3599
AcuI	CTGAAG	3 cut(s)	336, 1676, 2358
AdeI	CACNNNGTG	1 cut(s)	3225
AfeI	AGCGCT	1 cut(s)	321
AfiI	CCNNNNNNNGG	7 cut(s)	12, 541, 544, 1759, 1814, 2911, 2941
AflII	CTTAAG	1 cut(s)	1025
AflIII	ACRYGT	2 cut(s)	1735, 1797
AjiI	CACGTC	1 cut(s)	1800
AjnI	CCWGG	2 cut(s)	1353, 1752
Alw21I	GWGCWC	2 cut(s)	525, 3012
Alw26I	GTCTC	5 cut(s)	1067, 1121, 1195, 1210, 3166
AlwI	GGATC	6 cut(s)	19, 283, 785, 1357, 1799, 3403
Aor51HI	AGCGCT	1 cut(s)	321
AoxI	GGCC	7 cut(s)	14, 553, 1449, 1658, 2836, 2920, 3462
ApoI	RAATTY	9 cut(s)	91, 466, 738, 841, 924, 1559, 1650, 2186, 3599
ArsI	GACNNNNNNTTYG	2 cut(s)	1894, 1926
AsiSI	GCGATCGC	1 cut(s)	3531
Asp700I	GAANNNNTTC	3 cut(s)	208, 480, 1946
AspLEI	GCGC	2 cut(s)	322, 3626
AspS9I	GGNCC	5 cut(s)	992, 3118, 3132, 3462, 3664
AsuC2I	CCSGG	1 cut(s)	1400
AsuHPI	GGTGA	2 cut(s)	737, 1946
AvaII	GGWCC	4 cut(s)	992, 3118, 3132, 3664
BaeGI	GKGCMC	2 cut(s)	1045, 2015
BalI	TGGCCA	2 cut(s)	2838, 2922
BanI	GGYRCC	4 cut(s)	2010, 2297, 2332, 2612
BanII	GRGCYC	1 cut(s)	1105
BarI	GAAGNNNNNNTAC	6 cut(s)	1250, 1282, 1733, 1765, 2996, 3028
BauI	CACGAG	2 cut(s)	1967, 2531
BbsI	GAAGAC	2 cut(s)	854, 3235
Bbv12I	GWGCWC	2 cut(s)	525, 3012
BbvCI	CCTCAGC	1 cut(s)	3150
BceAI	ACGGC	3 cut(s)	447, 540, 2626
BcgI	CGANNNNNNTGC	2 cut(s)	268, 302
BciT130I	CCWGG	2 cut(s)	1355, 1754
BciVI	GTATCC	1 cut(s)	2740
BclI	TGATCA	1 cut(s)	1422
BcnI	CCSGG	1 cut(s)	1400
BcoDI	GTCTC	5 cut(s)	1067, 1121, 1195, 1210, 3166
BfaI	CTAG	5 cut(s)	462, 2294, 2523, 2666, 3140
BfmI	CTRYAG	5 cut(s)	147, 625, 1252, 2968, 3568
BfoI	RGCGCY	1 cut(s)	323
BfrI	CTTAAG	1 cut(s)	1025
BfuI	GTATCC	1 cut(s)	2740
BglII	AGATCT	1 cut(s)	3301
BlpI	GCTNAGC	1 cut(s)	323
BmcAI	AGTACT	2 cut(s)	440, 3566
Bme1390I	CCNGG	3 cut(s)	1355, 1400, 1754
Bme18I	GGWCC	4 cut(s)	992, 3118, 3132, 3664
BmgBI	CACGTC	1 cut(s)	1800
BmgT120I	GGNCC	5 cut(s)	992, 3118, 3132, 3462, 3664
BmiI	GGNNCC	9 cut(s)	993, 994, 1102, 2012, 2299, 2334, 2614, 3134, 3666
BmrFI	CCNGG	3 cut(s)	1355, 1400, 1754
BmrI	ACTGGG	5 cut(s)	807, 915, 998, 2336, 3469
BmsI	GCATC	9 cut(s)	601, 643, 677, 2497, 2838, 2873, 3424, 3497, 3643
BmuI	ACTGGG	5 cut(s)	807, 915, 998, 2336, 3469
BpiI	GAAGAC	2 cut(s)	854, 3235
BpmI	CTGGAG	1 cut(s)	1119
Bpu10I	CCTNAGC	1 cut(s)	3150
Bpu1102I	GCTNAGC	1 cut(s)	323
BpuEI	CTTGAG	3 cut(s)	1145, 2574, 2666
BpuMI	CCSGG	1 cut(s)	1400
Bsa29I	ATCGAT	1 cut(s)	2802
BsaAI	YACGTR	1 cut(s)	3007
BsaBI	GATNNNNATC	2 cut(s)	1367, 1980
BsaI	GGTCTC	2 cut(s)	1067, 1121
BsaJI	CCNNGG	5 cut(s)	225, 556, 1831, 1930, 3671
BsaWI	WCCGGW	2 cut(s)	101, 3360
BsaXI	ACNNNNNCTCC	4 cut(s)	1041, 1071, 1594, 1624
Bsc4I	CCNNNNNNNGG	7 cut(s)	12, 541, 544, 1759, 1814, 2911, 2941
Bse118I	RCCGGY	2 cut(s)	283, 1064
Bse3DI	GCAATG	2 cut(s)	2708, 2883
Bse8I	GATNNNNATC	2 cut(s)	1367, 1980
BseBI	CCWGG	2 cut(s)	1355, 1754
BseCI	ATCGAT	1 cut(s)	2802
BseDI	CCNNGG	5 cut(s)	225, 556, 1831, 1930, 3671
BseJI	GATNNNNATC	2 cut(s)	1367, 1980
BseLI	CCNNNNNNNGG	7 cut(s)	12, 541, 544, 1759, 1814, 2911, 2941
BseMI	GCAATG	2 cut(s)	2708, 2883
BseMII	CTCAG	6 cut(s)	337, 1134, 1536, 1717, 2165, 3164
BseRI	GAGGAG	6 cut(s)	318, 365, 1129, 1289, 2122, 2416
BseSI	GKGCMC	2 cut(s)	1045, 2015
BseYI	CCCAGC	2 cut(s)	142, 537
BsgI	GTGCAG	3 cut(s)	833, 1694, 3621
Bsh1236I	CGCG	2 cut(s)	853, 3626
Bsh1285I	CGRYCG	2 cut(s)	1069, 3531
BshFI	GGCC	7 cut(s)	16, 555, 1451, 1660, 2838, 2922, 3464
BshNI	GGYRCC	4 cut(s)	2010, 2297, 2332, 2612
BshVI	ATCGAT	1 cut(s)	2802
BsiEI	CGRYCG	2 cut(s)	1069, 3531
BsiHKAI	GWGCWC	2 cut(s)	525, 3012
BsiSI	CCGG	6 cut(s)	102, 123, 284, 1065, 1399, 3361
BslFI	GGGAC	4 cut(s)	316, 1005, 1825, 2405
BslI	CCNNNNNNNGG	7 cut(s)	12, 541, 544, 1759, 1814, 2911, 2941
BsmAI	GTCTC	5 cut(s)	1067, 1121, 1195, 1210, 3166
BsmBI	CGTCTC	1 cut(s)	1210
BsmFI	GGGAC	4 cut(s)	316, 1005, 1825, 2405
BsmI	GAATGC	3 cut(s)	956, 2980, 3185
BsnI	GGCC	7 cut(s)	16, 555, 1451, 1660, 2838, 2922, 3464
Bso31I	GGTCTC	2 cut(s)	1067, 1121
Bsp1286I	GDGCHC	5 cut(s)	525, 1045, 1105, 2015, 3012
Bsp1407I	TGTACA	2 cut(s)	1181, 1377
Bsp1720I	GCTNAGC	1 cut(s)	323
BspACI	CCGC	9 cut(s)	13, 545, 631, 853, 979, 2264, 2544, 2938, 3668
BspANI	GGCC	7 cut(s)	16, 555, 1451, 1660, 2838, 2922, 3464
BspCNI	CTCAG	6 cut(s)	336, 1135, 1535, 1716, 2166, 3163
BspDI	ATCGAT	1 cut(s)	2802
BspFNI	CGCG	2 cut(s)	853, 3626
BspHI	TCATGA	2 cut(s)	1359, 1419
BspLI	GGNNCC	9 cut(s)	993, 994, 1102, 2012, 2299, 2334, 2614, 3134, 3666
BspMAI	CTGCAG	1 cut(s)	151
BspPI	GGATC	6 cut(s)	19, 283, 785, 1357, 1799, 3403
BspQI	GCTCTTC	1 cut(s)	3017
BspT107I	GGYRCC	4 cut(s)	2010, 2297, 2332, 2612
BspTI	CTTAAG	1 cut(s)	1025
BspTNI	GGTCTC	2 cut(s)	1067, 1121
BsrDI	GCAATG	2 cut(s)	2708, 2883
BsrFI	RCCGGY	2 cut(s)	283, 1064
BsrGI	TGTACA	2 cut(s)	1181, 1377
BssAI	RCCGGY	2 cut(s)	283, 1064
BssECI	CCNNGG	5 cut(s)	225, 556, 1831, 1930, 3671
BssSI	CACGAG	2 cut(s)	1967, 2531
BssT1I	CCWWGG	3 cut(s)	225, 1831, 1930
Bst2BI	CACGAG	2 cut(s)	1967, 2531
Bst2UI	CCWGG	2 cut(s)	1355, 1754
Bst4CI	ACNGT	7 cut(s)	480, 947, 1186, 2026, 2471, 2539, 2678
Bst6I	CTCTTC	1 cut(s)	3017
BstAFI	CTTAAG	1 cut(s)	1025
BstAPI	GCANNNNNTGC	2 cut(s)	2225, 3485
BstAUI	TGTACA	2 cut(s)	1181, 1377
BstBAI	YACGTR	1 cut(s)	3007
BstC8I	GCNNGC	6 cut(s)	543, 1573, 1677, 2221, 2266, 2853
BstDSI	CCRYGG	1 cut(s)	556
BstEII	GGTNACC	1 cut(s)	683
BstFNI	CGCG	2 cut(s)	853, 3626
BstH2I	RGCGCY	1 cut(s)	323
BstHHI	GCGC	2 cut(s)	322, 3626
BstMAI	GTCTC	5 cut(s)	1067, 1121, 1195, 1210, 3166
BstMCI	CGRYCG	2 cut(s)	1069, 3531
BstNI	CCWGG	2 cut(s)	1355, 1754
BstNSI	RCATGY	4 cut(s)	331, 1739, 3061, 3383
BstPI	GGTNACC	1 cut(s)	683
BstSCI	CCNGG	3 cut(s)	1353, 1398, 1752
BstSFI	CTRYAG	5 cut(s)	147, 625, 1252, 2968, 3568
BstSLI	GKGCMC	2 cut(s)	1045, 2015
BstUI	CGCG	2 cut(s)	853, 3626
BstV2I	GAAGAC	2 cut(s)	854, 3235
BstX2I	RGATCY	2 cut(s)	3301, 3395
BstYI	RGATCY	2 cut(s)	3301, 3395
Bsu15I	ATCGAT	1 cut(s)	2802
BsuI	GTATCC	1 cut(s)	2740
BsuRI	GGCC	7 cut(s)	16, 555, 1451, 1660, 2838, 2922, 3464
BsuTUI	ATCGAT	1 cut(s)	2802
BtgI	CCRYGG	1 cut(s)	556
BtgZI	GCGATG	1 cut(s)	282
BtrI	CACGTC	1 cut(s)	1800
BtsI	GCAGTG	4 cut(s)	2201, 2223, 2985, 3324
Cac8I	GCNNGC	6 cut(s)	543, 1573, 1677, 2221, 2266, 2853
CciI	TCATGA	2 cut(s)	1359, 1419
CfoI	GCGC	2 cut(s)	322, 3626
Cfr10I	RCCGGY	2 cut(s)	283, 1064
Cfr13I	GGNCC	5 cut(s)	992, 3118, 3132, 3462, 3664
ClaI	ATCGAT	1 cut(s)	2802
CseI	GACGC	3 cut(s)	859, 1227, 3615
DraIII	CACNNNGTG	1 cut(s)	3225
EaeI	YGGCCR	3 cut(s)	553, 2836, 2920
Eam1104I	CTCTTC	1 cut(s)	3017
EarI	CTCTTC	1 cut(s)	3017
Eco130I	CCWWGG	3 cut(s)	225, 1831, 1930
Eco147I	AGGCCT	1 cut(s)	1451
Eco24I	GRGCYC	1 cut(s)	1105
Eco31I	GGTCTC	2 cut(s)	1067, 1121
Eco32I	GATATC	1 cut(s)	1927
Eco47I	GGWCC	4 cut(s)	992, 3118, 3132, 3664
Eco47III	AGCGCT	1 cut(s)	321
Eco57I	CTGAAG	3 cut(s)	336, 1676, 2358
Eco91I	GGTNACC	1 cut(s)	683
EcoO109I	RGGNCCY	3 cut(s)	992, 3118, 3132
EcoO65I	GGTNACC	1 cut(s)	683
EcoRI	GAATTC	1 cut(s)	2186
EcoRII	CCWGG	2 cut(s)	1353, 1752
EcoRV	GATATC	1 cut(s)	1927
EcoT14I	CCWWGG	3 cut(s)	225, 1831, 1930
EcoT38I	GRGCYC	1 cut(s)	1105
ErhI	CCWWGG	3 cut(s)	225, 1831, 1930
Esp3I	CGTCTC	1 cut(s)	1210
FalI	AAGNNNNNCTT	4 cut(s)	196, 228, 2212, 2244
FaqI	GGGAC	4 cut(s)	316, 1005, 1825, 2405
FauI	CCCGC	2 cut(s)	2257, 3675
FbaI	TGATCA	1 cut(s)	1422
FblI	GTMKAC	1 cut(s)	1794
FriOI	GRGCYC	1 cut(s)	1105
FspBI	CTAG	5 cut(s)	462, 2294, 2523, 2666, 3140
GlaI	GCGC	2 cut(s)	321, 3625
GsaI	CCCAGC	2 cut(s)	146, 541
GsuI	CTGGAG	1 cut(s)	1119
HaeII	RGCGCY	1 cut(s)	323
HaeIII	GGCC	7 cut(s)	16, 555, 1451, 1660, 2838, 2922, 3464
HapII	CCGG	6 cut(s)	102, 123, 284, 1065, 1399, 3361
HgaI	GACGC	3 cut(s)	859, 1227, 3615
HhaI	GCGC	2 cut(s)	322, 3626
Hin6I	GCGC	2 cut(s)	320, 3624
HinP1I	GCGC	2 cut(s)	320, 3624
HincII	GTYRAC	1 cut(s)	3207
HindII	GTYRAC	1 cut(s)	3207
HindIII	AAGCTT	1 cut(s)	2432
HpaI	GTTAAC	1 cut(s)	3207
HpaII	CCGG	6 cut(s)	102, 123, 284, 1065, 1399, 3361
HphI	GGTGA	2 cut(s)	737, 1946
Hpy166II	GTNNAC	6 cut(s)	1182, 1285, 1741, 1795, 2642, 3207
Hpy8I	GTNNAC	6 cut(s)	1182, 1285, 1741, 1795, 2642, 3207
Hpy99I	CGWCG	2 cut(s)	787, 2564
HpyCH4III	ACNGT	7 cut(s)	480, 947, 1186, 2026, 2471, 2539, 2678
HpyCH4IV	ACGT	4 cut(s)	168, 1328, 1799, 3006
HpySE526I	ACGT	4 cut(s)	168, 1328, 1799, 3006
HspAI	GCGC	2 cut(s)	320, 3624
KflI	GGGWCCC	1 cut(s)	992
Ksp22I	TGATCA	1 cut(s)	1422
KspAI	GTTAAC	1 cut(s)	3207
LguI	GCTCTTC	1 cut(s)	3017
LmnI	GCTCC	9 cut(s)	305, 537, 1100, 1390, 1615, 2710, 3051, 3161, 3538
LweI	GCATC	9 cut(s)	601, 643, 677, 2497, 2838, 2873, 3424, 3497, 3643
MaeI	CTAG	5 cut(s)	462, 2294, 2523, 2666, 3140
MaeII	ACGT	4 cut(s)	168, 1328, 1799, 3006
MaeIII	GTNAC	7 cut(s)	595, 683, 984, 1171, 2533, 2672, 3517
MfeI	CAATTG	1 cut(s)	3093
MflI	RGATCY	2 cut(s)	3301, 3395
MhlI	GDGCHC	5 cut(s)	525, 1045, 1105, 2015, 3012
MlsI	TGGCCA	2 cut(s)	2838, 2922
MluNI	TGGCCA	2 cut(s)	2838, 2922
MlyI	GAGTC	5 cut(s)	845, 1126, 1847, 2342, 2709
MmeI	TCCRAC	3 cut(s)	253, 818, 1215
Mox20I	TGGCCA	2 cut(s)	2838, 2922
MroXI	GAANNNNTTC	3 cut(s)	208, 480, 1946
MscI	TGGCCA	2 cut(s)	2838, 2922
MslI	CAYNNNNRTG	4 cut(s)	1385, 2057, 2121, 2516
Msp20I	TGGCCA	2 cut(s)	2838, 2922
MspA1I	CMGCKG	5 cut(s)	146, 152, 541, 2938, 3524
MspCI	CTTAAG	1 cut(s)	1025
MspI	CCGG	6 cut(s)	102, 123, 284, 1065, 1399, 3361
MspR9I	CCNGG	3 cut(s)	1355, 1400, 1754
MunI	CAATTG	1 cut(s)	3093
Mva1269I	GAATGC	3 cut(s)	956, 2980, 3185
MvaI	CCWGG	2 cut(s)	1355, 1754
MvnI	CGCG	2 cut(s)	853, 3626
NciI	CCSGG	1 cut(s)	1400
NlaIV	GGNNCC	9 cut(s)	993, 994, 1102, 2012, 2299, 2334, 2614, 3134, 3666
NmeAIII	GCCGAG	2 cut(s)	1499, 2723
NmuCI	GTSAC	3 cut(s)	984, 2533, 3517
NspI	RCATGY	4 cut(s)	331, 1739, 3061, 3383
PagI	TCATGA	2 cut(s)	1359, 1419
PceI	AGGCCT	1 cut(s)	1451
PciI	ACATGT	1 cut(s)	1735
PciSI	GCTCTTC	1 cut(s)	3017
PctI	GAATGC	3 cut(s)	956, 2980, 3185
PdmI	GAANNNNTTC	3 cut(s)	208, 480, 1946
PfeI	GAWTC	6 cut(s)	311, 1318, 2483, 2892, 3106, 3211
PflFI	GACNNNGTC	1 cut(s)	2539
PflMI	CCANNNNNTGG	1 cut(s)	2941
Ple19I	CGATCG	1 cut(s)	3531
PleI	GAGTC	5 cut(s)	844, 1125, 1846, 2342, 2708
PpsI	GAGTC	5 cut(s)	844, 1125, 1846, 2342, 2708
Ppu21I	YACGTR	1 cut(s)	3007
PpuMI	RGGWCCY	3 cut(s)	992, 3118, 3132
PscI	ACATGT	1 cut(s)	1735
PsiI	TTATAA	3 cut(s)	1293, 1593, 2462
Psp1406I	AACGTT	1 cut(s)	168
Psp5II	RGGWCCY	3 cut(s)	992, 3118, 3132
Psp6I	CCWGG	2 cut(s)	1353, 1752
PspEI	GGTNACC	1 cut(s)	683
PspFI	CCCAGC	2 cut(s)	142, 537
PspGI	CCWGG	2 cut(s)	1353, 1752
PspN4I	GGNNCC	9 cut(s)	993, 994, 1102, 2012, 2299, 2334, 2614, 3134, 3666
PspPI	GGNCC	5 cut(s)	992, 3118, 3132, 3462, 3664
PspPPI	RGGWCCY	3 cut(s)	992, 3118, 3132
PsrI	GAACNNNNNNTAC	2 cut(s)	31, 63
PstI	CTGCAG	1 cut(s)	151
PsuI	RGATCY	2 cut(s)	3301, 3395
PsyI	GACNNNGTC	1 cut(s)	2539
PvuI	CGATCG	1 cut(s)	3531
PvuII	CAGCTG	4 cut(s)	146, 152, 541, 3524
RgaI	GCGATCGC	1 cut(s)	3531
RseI	CAYNNNNRTG	4 cut(s)	1385, 2057, 2121, 2516
SapI	GCTCTTC	1 cut(s)	3017
Sau96I	GGNCC	5 cut(s)	992, 3118, 3132, 3462, 3664
ScaI	AGTACT	2 cut(s)	440, 3566
SchI	GAGTC	5 cut(s)	845, 1126, 1847, 2342, 2709
ScrFI	CCNGG	3 cut(s)	1355, 1400, 1754
SduI	GDGCHC	5 cut(s)	525, 1045, 1105, 2015, 3012
SfaAI	GCGATCGC	1 cut(s)	3531
SfaNI	GCATC	9 cut(s)	601, 643, 677, 2497, 2838, 2873, 3424, 3497, 3643
SfcI	CTRYAG	5 cut(s)	147, 625, 1252, 2968, 3568
SgfI	GCGATCGC	1 cut(s)	3531
SinI	GGWCC	4 cut(s)	992, 3118, 3132, 3664
SmiMI	CAYNNNNRTG	4 cut(s)	1385, 2057, 2121, 2516
SmlI	CTYRAG	4 cut(s)	1025, 1124, 2589, 2645
SmoI	CTYRAG	4 cut(s)	1025, 1124, 2589, 2645
SseBI	AGGCCT	1 cut(s)	1451
SsiI	CCGC	9 cut(s)	13, 545, 631, 853, 979, 2264, 2544, 2938, 3668
SspMI	CTAG	5 cut(s)	462, 2294, 2523, 2666, 3140
StuI	AGGCCT	1 cut(s)	1451
StyD4I	CCNGG	3 cut(s)	1353, 1398, 1752
StyI	CCWWGG	3 cut(s)	225, 1831, 1930
TaaI	ACNGT	7 cut(s)	480, 947, 1186, 2026, 2471, 2539, 2678
TaiI	ACGT	4 cut(s)	171, 1331, 1802, 3009
TaqII	GACCGA	1 cut(s)	627
TatI	WGTACW	5 cut(s)	438, 1006, 1181, 1377, 3564
TauI	GCSGC	2 cut(s)	16, 634
TfiI	GAWTC	6 cut(s)	311, 1318, 2483, 2892, 3106, 3211
TseFI	GTSAC	3 cut(s)	984, 2533, 3517
Tsp45I	GTSAC	3 cut(s)	984, 2533, 3517
TspGWI	ACGGA	2 cut(s)	2577, 3174
Tth111I	GACNNNGTC	1 cut(s)	2539
Van91I	CCANNNNNTGG	1 cut(s)	2941
Vha464I	CTTAAG	1 cut(s)	1025
VpaK11BI	GGWCC	4 cut(s)	992, 3118, 3132, 3664
XapI	RAATTY	9 cut(s)	91, 466, 738, 841, 924, 1559, 1650, 2186, 3599
XbaI	TCTAGA	1 cut(s)	3139
XceI	RCATGY	4 cut(s)	331, 1739, 3061, 3383
XcmI	CCANNNNNNNNNTGG	1 cut(s)	574
XmiI	GTMKAC	1 cut(s)	1794
XmnI	GAANNNNTTC	3 cut(s)	208, 480, 1946
XspI	CTAG	5 cut(s)	462, 2294, 2523, 2666, 3140
ZrmI	AGTACT	2 cut(s)	440, 3566

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.