Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00091

Orthogroup ID

OG0012183

Physical Location & Seq

Genomic Coordinates Reverse (-)

50201 .. 53328

Gene Structure 3128 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G002870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

ATGATCAAGTGTGAGAAACCCAACAGGAATATTTATGGATTTCAGGCATTCATGGAGATTGATGGGAAAAGACTGTCATTAGGTCCCTCCAACATTGTGCTTCGAGGCTGTGAGCTCAAGAATACTCATTGGGCCCTTGGGGTGGCTGTATATGCTGGTCGTGAGACCAAAGTTATGCTCAATAGCTCTGGAGCCCCATCCAAGAGGAGTCGTCTCGAGACACGTATGAACCACGAGATCATTGTGCTCTCACTGTTTCTTGTCGTCTTGTGTTCAGTTGTCTCTCTGTGTGCTGCTGTTTGGTTGAGGCGCGAAAGTGATAATTTGGACGACATACTTTTCTACAGGAAGAAGGACTACTCTGAAGATGAAGTGAAGGATTATAAGTATTATGGATGGGCATTAGAGATTGTTTTCACGTTCCTCATGTCTATCATCGTGTTCCAGATCATGATCCCCATCTCTTTGTACATTTCTATGGAGCTCGTCCGGGTGGGTCAGGCTTACTTCATGATACGAGATAGTCAAATGTATGATGAGGCTTCTAATGCAAGATTTCAGTGCAGAGCTTTGAATATAAATGAAGATTTAGGACAAATTAAGTATGTATTCTCCGACAAAACTGGTACACTTACCGAGAACAAAATGGAATTTCAATGTGCAAGCATTTGGGGAGTTGATTATAATGGTGGGAGAGGCAGTTTGGAAAAGGACCAATTGGTGCACAATGTTCAAATTGATGGAATTGTTTTGAGGCCAAAGATGAATGTAAAGGCTGACCCAGATCTTCTACGACTACTAAGAAGTGAAAAGGACACAAATGAAGGCAAACATGTGCACGAGTTCTTCCTCGCATTGGCAGCTTGTAATACTATTGTGCCTCTTGTTACAGACTCGTCTGATCCAAATGTGAGATTGATTGATTACCAAGGGGAGTCTCCAGATGAACAGGCATTAGTTTATGCTGCTGCCGCCTATGGTTTTATGCTTATTGAAAGAACGTCTGGTCATATAACTATTGATATCCAAGGAGAAAGGCAAAGGTTCAGTGTTCTGGGTTTGCATGAATTTGATAGTGACCGGAAGAGAATGTCGGTGATATTGGGGTGCCCTGATAAAACTGTGAAAGTGTTTGTAAAAGGTGCTGACACTACCATGTTCAGTGTAACAGACAGAAGATTGAACTTGAACATAATACGCGCAACAGAAGCCCATATTCATGCTTACTCCTCTCTGGGTTTGAGAACACTTGTTGTGGGGATGAGAGAACTCACTGCTTCAGAATTTGAGCAGTGGCACTCTTCTTTTGAGGCAGCAAGCACTGCTTTAATAGGCAGGGCTGTTCTGCTTCGCAAGGTTGCTGGCAACATAGAGAACAATCTCATAATTTTAGGTGCCTCTGGTATTGAAGACAAACTGCAACTGGGGGTGCCTGAGGCCATAGACTCTCTAAGAACTGCAGGGGTTCAGGTGTGGGTTTTGACGGGGGACAAGCAAGAAACTGCCATATCAATTGGCTACTCATCAAAGCTTCTTACAAGAAGGATGACCCAGATTTTAATTAACAGCAGCTCTAAGGAGTCATGTAGACGGAATTTAGAAGATGCCATACTCATGTCTAAGAAGCTCACGACCGTGTCTGGCAATGAACACAGTACCCGAGGAAGTTCTGGAGATGGTATAACTTCATTGGCTTTAATTATCGATGGTACCAGCCTTGTTTATATTCTTGACAGTGAACTTGAGGAAAAGCTATTTGAATTAGCAAATAGATGTTCTGTGGTGCTCTGTTGCCGAGTCGCTCCTCTGCAAAAAGCTGGAATTGTTGCCCTTGTAAAAAACAGAACTGCTGATATGACACTTGCCATTGGGGATGGTGCTAATGATGTTTCGATGATCCAAATGGCTGATGTTGGAGTTGGAATCAGTGGCCAAGAGGGTCGACAAGCTGTCATGGCTTCAGATTTTGCAATGGGGCAGTTCAGATTCTTAGTTCCCCTCTTATTGGTACATGGGCATTGGAATTACCAGCGAATGGGCTACATGATACTTTACAACTTTTATAGGAATGCTGTGTTTGTTCTTATTTTGTTTTGGTATGTGCTCTTTACTTGTTTTACTCTGACAACTGCAATCACGGAATGGAGCAGCATGTTGTATTCTATAATCTACACTGCATTACCTACAATAGTTGTAGGGTTCTTGACAAGGACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004012 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0008150 GO:0009987 GO:0010876 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0033036 GO:0034204 GO:0042623 GO:0043492 GO:0044464 GO:0045332 GO:0051179 GO:0051234 GO:0061024 GO:0065007 GO:0065008 GO:0071702 GO:0071840 GO:0071944 GO:0097035

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase E1-E2_ATPase PhoLip_ATPase_C PhoLip_ATPase_N

Protein Analysis

738

Amino Acids

82.6

Weight (kDa)

6.4

Isoelectric Point (pI)

38.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase	PF13246	283 - 474	2.2e-14	P-type ATPase, cytoplasmic domain N
PhoLip_ATPase_C	PF16212	651 - 735	5.5e-32	Phospholipid-translocating P-type ATPase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012183)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04930
fragaria_vesca	FvH4_7g05080 FvH4_7g05080
malus_domestica	MD02G1263000.v1.1 MD07G1054900.v1.1
prunus_persica	Prupe.2G061800_v2.0.a1
pyrus_communis	pycom02g22540 pycom07g04270
rosa_chinensis	RchiOBHm_Chr1g0331371
rosa_laevigata	RLG00000029738
rosa_multiflora	Rmu_sc0005956.1_g000004
rosa_roxburghii	Rroxscaffold_4G00319160
rosa_rugosa	Rorug01G0092900 Rorug01G0092900
rosa_samantha	Rh1AG117900 Rh1BG088700 Rh1CG112800
rosa_wichuraiana	Rw0G002870 Rw1G009440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	384, 684
Acc65I	GGTACC	1 cut(s)	1709
AccB1I	GGYRCC	4 cut(s)	1107, 1394, 1429, 1709
AccB7I	CCANNNNNTGG	1 cut(s)	2035
AccI	GTMKAC	2 cut(s)	1588, 1942
AccII	CGCG	2 cut(s)	312, 1200
AciI	CCGC	1 cut(s)	972
AclWI	GGATC	3 cut(s)	448, 896, 1891
AcoI	YGGCCR	1 cut(s)	1930
AcsI	RAATTY	4 cut(s)	650, 1067, 1283, 1594
AcuI	CTGAAG	3 cut(s)	384, 1263, 1944
AfaI	GTAC	5 cut(s)	470, 628, 1657, 1711, 2010
AfiI	CCNNNNNNNGG	4 cut(s)	142, 856, 2005, 2035
AflIII	ACRYGT	2 cut(s)	221, 832
AgsI	TTSAA	8 cut(s)	574, 656, 734, 995, 1183, 1189, 1409, 1760
AhdI	GACNNNNNGTC	1 cut(s)	1949
AleI	CACNNNNGTG	1 cut(s)	1634
Alw21I	GWGCWC	7 cut(s)	117, 249, 486, 726, 840, 1788, 2106
Alw26I	GTCTC	5 cut(s)	158, 212, 218, 286, 942
Alw44I	GTGCAC	2 cut(s)	722, 836
AlwI	GGATC	3 cut(s)	448, 896, 1891
Ama87I	CYCGRG	2 cut(s)	215, 1659
AoxI	GGCC	4 cut(s)	132, 755, 1437, 1930
ApaI	GGGCCC	1 cut(s)	136
ApaLI	GTGCAC	2 cut(s)	722, 836
ApeKI	GCWGC	7 cut(s)	293, 860, 965, 968, 1313, 1569, 2148
ApoI	RAATTY	4 cut(s)	650, 1067, 1283, 1594
Asp718I	GGTACC	1 cut(s)	1709
AspLEI	GCGC	2 cut(s)	312, 1202
AspS9I	GGNCC	5 cut(s)	83, 132, 133, 712, 2211
AsuC2I	CCSGG	1 cut(s)	491
AsuHPI	GGTGA	1 cut(s)	1108
AvaI	CYCGRG	2 cut(s)	215, 1659
AvaII	GGWCC	3 cut(s)	83, 712, 2211
AxyI	CCTNAGG	1 cut(s)	1434
BaeGI	GKGCMC	4 cut(s)	136, 726, 840, 1112
BalI	TGGCCA	1 cut(s)	1932
BanI	GGYRCC	4 cut(s)	1107, 1394, 1429, 1709
BanII	GRGCYC	4 cut(s)	117, 136, 196, 486
BarI	GAAGNNNNNNTAC	4 cut(s)	341, 373, 1593, 1625
BauI	CACGAG	2 cut(s)	233, 839
BbsI	GAAGAC	1 cut(s)	1416
Bbv12I	GWGCWC	7 cut(s)	117, 249, 486, 726, 840, 1788, 2106
BbvI	GCAGC	7 cut(s)	280, 872, 952, 955, 1325, 1581, 2160
BccI	CCATC	8 cut(s)	56, 205, 390, 467, 734, 1670, 1700, 1868
BclI	TGATCA	1 cut(s)	3
BcnI	CCSGG	1 cut(s)	491
BcoDI	GTCTC	5 cut(s)	158, 212, 218, 286, 942
BfmI	CTRYAG	2 cut(s)	343, 1458
BglII	AGATCT	1 cut(s)	784
BisI	GCNGC	8 cut(s)	294, 861, 966, 969, 972, 1314, 1570, 2149
BlsI	GCNGC	8 cut(s)	295, 862, 967, 970, 973, 1315, 1571, 2150
Bme1390I	CCNGG	1 cut(s)	491
Bme18I	GGWCC	3 cut(s)	83, 712, 2211
BmeRI	GACNNNNNGTC	1 cut(s)	1949
BmeT110I	CYCGRG	2 cut(s)	215, 1659
BmgT120I	GGNCC	5 cut(s)	83, 132, 133, 712, 2211
BmiI	GGNNCC	7 cut(s)	85, 134, 193, 1109, 1396, 1431, 1711
BmrFI	CCNGG	1 cut(s)	491
BmrI	ACTGGG	1 cut(s)	1433
BmsI	GCATC	1 cut(s)	1594
BmuI	ACTGGG	1 cut(s)	1433
BpiI	GAAGAC	1 cut(s)	1416
BpmI	CTGGAG	3 cut(s)	210, 924, 1692
BpuEI	CTTGAG	2 cut(s)	101, 1763
BpuMI	CCSGG	1 cut(s)	491
Bsa29I	ATCGAT	1 cut(s)	1704
BsaAI	YACGTR	1 cut(s)	224
BsaBI	GATNNNNATC	2 cut(s)	452, 458
BsaI	GGTCTC	1 cut(s)	158
BsaJI	CCNNGG	4 cut(s)	136, 928, 1027, 1660
BsaWI	WCCGGW	1 cut(s)	1080
BsaXI	ACNNNNNCTCC	2 cut(s)	685, 715
Bsc4I	CCNNNNNNNGG	4 cut(s)	142, 856, 2005, 2035
Bse1I	ACTGG	2 cut(s)	628, 1428
Bse21I	CCTNAGG	1 cut(s)	1434
Bse3DI	GCAATG	2 cut(s)	1651, 1977
Bse8I	GATNNNNATC	2 cut(s)	452, 458
BseCI	ATCGAT	1 cut(s)	1704
BseDI	CCNNGG	4 cut(s)	136, 928, 1027, 1660
BseGI	GGATG	5 cut(s)	197, 401, 1266, 1551, 1879
BseJI	GATNNNNATC	2 cut(s)	452, 458
BseLI	CCNNNNNNNGG	4 cut(s)	142, 856, 2005, 2035
BseMI	GCAATG	2 cut(s)	1651, 1977
BseMII	CTCAG	1 cut(s)	1425
BseNI	ACTGG	2 cut(s)	628, 1428
BseRI	GAGGAG	3 cut(s)	220, 1219, 1794
BseSI	GKGCMC	4 cut(s)	136, 726, 840, 1112
BseXI	GCAGC	7 cut(s)	280, 872, 952, 955, 1325, 1581, 2160
BsgI	GTGCAG	1 cut(s)	583
Bsh1236I	CGCG	2 cut(s)	312, 1200
Bsh1285I	CGRYCG	1 cut(s)	1635
BshFI	GGCC	4 cut(s)	134, 757, 1439, 1932
BshNI	GGYRCC	4 cut(s)	1107, 1394, 1429, 1709
BshVI	ATCGAT	1 cut(s)	1704
BsiEI	CGRYCG	1 cut(s)	1635
BsiHKAI	GWGCWC	7 cut(s)	117, 249, 486, 726, 840, 1788, 2106
BsiHKCI	CYCGRG	2 cut(s)	215, 1659
BsiSI	CCGG	2 cut(s)	490, 1081
BslFI	GGGAC	2 cut(s)	69, 1502
BslI	CCNNNNNNNGG	4 cut(s)	142, 856, 2005, 2035
BsmAI	GTCTC	5 cut(s)	158, 212, 218, 286, 942
BsmBI	CGTCTC	1 cut(s)	218
BsmFI	GGGAC	2 cut(s)	69, 1502
BsmI	GAATGC	2 cut(s)	47, 2074
BsnI	GGCC	4 cut(s)	134, 757, 1439, 1932
Bso31I	GGTCTC	1 cut(s)	158
BsoBI	CYCGRG	2 cut(s)	215, 1659
Bsp120I	GGGCCC	1 cut(s)	132
Bsp1407I	TGTACA	1 cut(s)	468
Bsp143I	GATC	7 cut(s)	3, 237, 447, 453, 784, 901, 1896
BspACI	CCGC	1 cut(s)	972
BspANI	GGCC	4 cut(s)	134, 757, 1439, 1932
BspCNI	CTCAG	1 cut(s)	1426
BspDI	ATCGAT	1 cut(s)	1704
BspFNI	CGCG	2 cut(s)	312, 1200
BspHI	TCATGA	2 cut(s)	450, 510
BspLI	GGNNCC	7 cut(s)	85, 134, 193, 1109, 1396, 1431, 1711
BspMAI	CTGCAG	1 cut(s)	1462
BspPI	GGATC	3 cut(s)	448, 896, 1891
BspT107I	GGYRCC	4 cut(s)	1107, 1394, 1429, 1709
BspTNI	GGTCTC	1 cut(s)	158
BsrDI	GCAATG	2 cut(s)	1651, 1977
BsrGI	TGTACA	1 cut(s)	468
BsrI	ACTGG	2 cut(s)	628, 1428
BssECI	CCNNGG	4 cut(s)	136, 928, 1027, 1660
BssMI	GATC	7 cut(s)	3, 237, 447, 453, 784, 901, 1896
BssSI	CACGAG	2 cut(s)	233, 839
BssT1I	CCWWGG	3 cut(s)	136, 928, 1027
Bst2BI	CACGAG	2 cut(s)	233, 839
Bst4CI	ACNGT	6 cut(s)	75, 255, 1123, 1636, 1655, 1736
Bst6I	CTCTTC	2 cut(s)	1079, 1306
BstAPI	GCANNNNNTGC	1 cut(s)	1322
BstAUI	TGTACA	1 cut(s)	468
BstBAI	YACGTR	1 cut(s)	224
BstC8I	GCNNGC	3 cut(s)	664, 1318, 1363
BstDEI	CTNAG	6 cut(s)	800, 1434, 1451, 1575, 1620, 1990
BstF5I	GGATG	5 cut(s)	197, 401, 1266, 1551, 1879
BstFNI	CGCG	2 cut(s)	312, 1200
BstHHI	GCGC	2 cut(s)	312, 1202
BstKTI	GATC	7 cut(s)	6, 240, 450, 456, 787, 904, 1899
BstMAI	GTCTC	5 cut(s)	158, 212, 218, 286, 942
BstMBI	GATC	7 cut(s)	3, 237, 447, 453, 784, 901, 1896
BstMCI	CGRYCG	1 cut(s)	1635
BstMWI	GCNNNNNNNGC	7 cut(s)	152, 548, 860, 971, 1208, 1322, 1955
BstNSI	RCATGY	2 cut(s)	836, 2155
BstSCI	CCNGG	1 cut(s)	489
BstSFI	CTRYAG	2 cut(s)	343, 1458
BstSLI	GKGCMC	4 cut(s)	136, 726, 840, 1112
BstUI	CGCG	2 cut(s)	312, 1200
BstV1I	GCAGC	7 cut(s)	280, 872, 952, 955, 1325, 1581, 2160
BstV2I	GAAGAC	1 cut(s)	1416
BstX2I	RGATCY	1 cut(s)	784
BstYI	RGATCY	1 cut(s)	784
Bsu15I	ATCGAT	1 cut(s)	1704
Bsu36I	CCTNAGG	1 cut(s)	1434
BsuRI	GGCC	4 cut(s)	134, 757, 1439, 1932
BsuTUI	ATCGAT	1 cut(s)	1704
BtsCI	GGATG	5 cut(s)	197, 401, 1266, 1551, 1879
BtsI	GCAGTG	4 cut(s)	1272, 1298, 1320, 2172
Cac8I	GCNNGC	3 cut(s)	664, 1318, 1363
CciI	TCATGA	2 cut(s)	450, 510
CfoI	GCGC	2 cut(s)	312, 1202
Cfr13I	GGNCC	5 cut(s)	83, 132, 133, 712, 2211
ClaI	ATCGAT	1 cut(s)	1704
Csp6I	GTAC	5 cut(s)	469, 627, 1656, 1710, 2009
CviQI	GTAC	5 cut(s)	469, 627, 1656, 1710, 2009
DdeI	CTNAG	6 cut(s)	800, 1434, 1451, 1575, 1620, 1990
DpnI	GATC	7 cut(s)	5, 239, 449, 455, 786, 903, 1898
DpnII	GATC	7 cut(s)	3, 237, 447, 453, 784, 901, 1896
DriI	GACNNNNNGTC	1 cut(s)	1949
EaeI	YGGCCR	1 cut(s)	1930
Eam1104I	CTCTTC	2 cut(s)	1079, 1306
Eam1105I	GACNNNNNGTC	1 cut(s)	1949
EarI	CTCTTC	2 cut(s)	1079, 1306
Ecl136II	GAGCTC	2 cut(s)	115, 484
Eco130I	CCWWGG	3 cut(s)	136, 928, 1027
Eco24I	GRGCYC	4 cut(s)	117, 136, 196, 486
Eco31I	GGTCTC	1 cut(s)	158
Eco32I	GATATC	1 cut(s)	1024
Eco47I	GGWCC	3 cut(s)	83, 712, 2211
Eco53kI	GAGCTC	2 cut(s)	115, 484
Eco57I	CTGAAG	3 cut(s)	384, 1263, 1944
Eco81I	CCTNAGG	1 cut(s)	1434
Eco88I	CYCGRG	2 cut(s)	215, 1659
EcoICRI	GAGCTC	2 cut(s)	115, 484
EcoO109I	RGGNCCY	3 cut(s)	83, 133, 2211
EcoRV	GATATC	1 cut(s)	1024
EcoT14I	CCWWGG	3 cut(s)	136, 928, 1027
EcoT38I	GRGCYC	4 cut(s)	117, 136, 196, 486
ErhI	CCWWGG	3 cut(s)	136, 928, 1027
Esp3I	CGTCTC	1 cut(s)	218
FalI	AAGNNNNNCTT	2 cut(s)	1309, 1341
FaqI	GGGAC	2 cut(s)	69, 1502
FbaI	TGATCA	1 cut(s)	3
FblI	GTMKAC	2 cut(s)	1588, 1942
Fnu4HI	GCNGC	8 cut(s)	294, 861, 966, 969, 972, 1314, 1570, 2149
FokI	GGATG	5 cut(s)	184, 408, 1273, 1558, 1886
FriOI	GRGCYC	4 cut(s)	117, 136, 196, 486
Fsp4HI	GCNGC	8 cut(s)	294, 861, 966, 969, 972, 1314, 1570, 2149
GlaI	GCGC	2 cut(s)	311, 1201
GluI	GCNGC	8 cut(s)	294, 861, 966, 969, 972, 1314, 1570, 2149
GsuI	CTGGAG	3 cut(s)	210, 924, 1692
HaeIII	GGCC	4 cut(s)	134, 757, 1439, 1932
HapII	CCGG	2 cut(s)	490, 1081
HhaI	GCGC	2 cut(s)	312, 1202
Hin6I	GCGC	2 cut(s)	310, 1200
HinP1I	GCGC	2 cut(s)	310, 1200
HincII	GTYRAC	1 cut(s)	1943
HindII	GTYRAC	1 cut(s)	1943
HindIII	AAGCTT	1 cut(s)	1529
HinfI	GANTC	8 cut(s)	208, 893, 935, 1445, 1580, 1797, 1923, 1986
HpaII	CCGG	2 cut(s)	490, 1081
HphI	GGTGA	1 cut(s)	1108
Hpy166II	GTNNAC	6 cut(s)	629, 724, 838, 1589, 1739, 1943
Hpy188I	TCNGA	7 cut(s)	364, 616, 901, 1282, 1963, 1985, 2124
Hpy8I	GTNNAC	6 cut(s)	629, 724, 838, 1589, 1739, 1943
HpyAV	CCTTC	4 cut(s)	346, 370, 818, 1536
HpyCH4III	ACNGT	6 cut(s)	75, 255, 1123, 1636, 1655, 1736
HpyCH4IV	ACGT	3 cut(s)	223, 419, 1001
HpyF10VI	GCNNNNNNNGC	7 cut(s)	152, 548, 860, 971, 1208, 1322, 1955
HpyF3I	CTNAG	6 cut(s)	800, 1434, 1451, 1575, 1620, 1990
HpySE526I	ACGT	3 cut(s)	223, 419, 1001
HspAI	GCGC	2 cut(s)	310, 1200
KpnI	GGTACC	1 cut(s)	1713
Ksp22I	TGATCA	1 cut(s)	3
Kzo9I	GATC	7 cut(s)	3, 237, 447, 453, 784, 901, 1896
LmnI	GCTCC	4 cut(s)	191, 481, 1807, 2145
Lsp1109I	GCAGC	7 cut(s)	280, 872, 952, 955, 1325, 1581, 2160
LweI	GCATC	1 cut(s)	1594
MaeII	ACGT	3 cut(s)	223, 419, 1001
MaeIII	GTNAC	3 cut(s)	886, 1076, 1165
MalI	GATC	7 cut(s)	5, 239, 449, 455, 786, 903, 1898
MboI	GATC	7 cut(s)	3, 237, 447, 453, 784, 901, 1896
MfeI	CAATTG	2 cut(s)	716, 1512
MflI	RGATCY	1 cut(s)	784
MlsI	TGGCCA	1 cut(s)	1932
MluNI	TGGCCA	1 cut(s)	1932
MlyI	GAGTC	6 cut(s)	217, 887, 944, 1439, 1589, 1806
MmeI	TCCRAC	4 cut(s)	114, 639, 1894, 1900
Mox20I	TGGCCA	1 cut(s)	1932
MscI	TGGCCA	1 cut(s)	1932
MseI	TTAA	5 cut(s)	600, 1328, 1559, 1563, 1697
MslI	CAYNNNNRTG	5 cut(s)	476, 1154, 1218, 1613, 1634
Msp20I	TGGCCA	1 cut(s)	1932
MspI	CCGG	2 cut(s)	490, 1081
MspR9I	CCNGG	1 cut(s)	491
MunI	CAATTG	2 cut(s)	716, 1512
Mva1269I	GAATGC	2 cut(s)	47, 2074
MvnI	CGCG	2 cut(s)	312, 1200
MwoI	GCNNNNNNNGC	7 cut(s)	152, 548, 860, 971, 1208, 1322, 1955
NciI	CCSGG	1 cut(s)	491
NdeII	GATC	7 cut(s)	3, 237, 447, 453, 784, 901, 1896
NlaIV	GGNNCC	7 cut(s)	85, 134, 193, 1109, 1396, 1431, 1711
NmeAIII	GCCGAG	1 cut(s)	1820
NmuCI	GTSAC	1 cut(s)	1076
NspI	RCATGY	2 cut(s)	836, 2155
OliI	CACNNNNGTG	1 cut(s)	1634
PacI	TTAATTAA	1 cut(s)	1563
PaeR7I	CTCGAG	1 cut(s)	215
PagI	TCATGA	2 cut(s)	450, 510
PciI	ACATGT	1 cut(s)	832
PctI	GAATGC	2 cut(s)	47, 2074
PfeI	GAWTC	2 cut(s)	1923, 1986
PflFI	GACNNNGTC	1 cut(s)	1636
PflMI	CCANNNNNTGG	1 cut(s)	2035
PkrI	GCNGC	8 cut(s)	295, 862, 967, 970, 973, 1315, 1571, 2150
PleI	GAGTC	6 cut(s)	216, 887, 943, 1439, 1588, 1805
PpsI	GAGTC	6 cut(s)	216, 887, 943, 1439, 1588, 1805
Ppu21I	YACGTR	1 cut(s)	224
PpuMI	RGGWCCY	2 cut(s)	83, 2211
PscI	ACATGT	1 cut(s)	832
PsiI	TTATAA	2 cut(s)	384, 684
Psp124BI	GAGCTC	2 cut(s)	117, 486
Psp5II	RGGWCCY	2 cut(s)	83, 2211
PspN4I	GGNNCC	7 cut(s)	85, 134, 193, 1109, 1396, 1431, 1711
PspOMI	GGGCCC	1 cut(s)	132
PspPI	GGNCC	5 cut(s)	83, 132, 133, 712, 2211
PspPPI	RGGWCCY	2 cut(s)	83, 2211
PstI	CTGCAG	1 cut(s)	1462
PsuI	RGATCY	1 cut(s)	784
PsyI	GACNNNGTC	1 cut(s)	1636
RsaI	GTAC	5 cut(s)	470, 628, 1657, 1711, 2010
RsaNI	GTAC	5 cut(s)	469, 627, 1656, 1710, 2009
RseI	CAYNNNNRTG	5 cut(s)	476, 1154, 1218, 1613, 1634
SacI	GAGCTC	2 cut(s)	117, 486
SalI	GTCGAC	1 cut(s)	1941
SaqAI	TTAA	5 cut(s)	600, 1328, 1559, 1563, 1697
SatI	GCNGC	8 cut(s)	294, 861, 966, 969, 972, 1314, 1570, 2149
Sau3AI	GATC	7 cut(s)	3, 237, 447, 453, 784, 901, 1896
Sau96I	GGNCC	5 cut(s)	83, 132, 133, 712, 2211
SchI	GAGTC	6 cut(s)	217, 887, 944, 1439, 1589, 1806
ScrFI	CCNGG	1 cut(s)	491
SfaNI	GCATC	1 cut(s)	1594
SfcI	CTRYAG	2 cut(s)	343, 1458
Sfr274I	CTCGAG	1 cut(s)	215
SinI	GGWCC	3 cut(s)	83, 712, 2211
SlaI	CTCGAG	1 cut(s)	215
SmiMI	CAYNNNNRTG	5 cut(s)	476, 1154, 1218, 1613, 1634
SmlI	CTYRAG	3 cut(s)	116, 215, 1742
SmoI	CTYRAG	3 cut(s)	116, 215, 1742
SsiI	CCGC	1 cut(s)	972
SspI	AATATT	1 cut(s)	31
SstI	GAGCTC	2 cut(s)	117, 486
StyD4I	CCNGG	1 cut(s)	489
StyI	CCWWGG	3 cut(s)	136, 928, 1027
TaaI	ACNGT	6 cut(s)	75, 255, 1123, 1636, 1655, 1736
TaiI	ACGT	3 cut(s)	226, 422, 1004
TaqI	TCGA	5 cut(s)	103, 216, 1704, 1892, 1942
TatI	WGTACW	1 cut(s)	468
TauI	GCSGC	1 cut(s)	974
TfiI	GAWTC	2 cut(s)	1923, 1986
Tru1I	TTAA	5 cut(s)	600, 1328, 1559, 1563, 1697
Tru9I	TTAA	5 cut(s)	600, 1328, 1559, 1563, 1697
TseFI	GTSAC	1 cut(s)	1076
TseI	GCWGC	7 cut(s)	293, 860, 965, 968, 1313, 1569, 2148
Tsp45I	GTSAC	1 cut(s)	1076
TspGWI	ACGGA	2 cut(s)	1606, 2153
Tth111I	GACNNNGTC	1 cut(s)	1636
Van91I	CCANNNNNTGG	1 cut(s)	2035
VneI	GTGCAC	2 cut(s)	722, 836
VpaK11BI	GGWCC	3 cut(s)	83, 712, 2211
XapI	RAATTY	4 cut(s)	650, 1067, 1283, 1594
XceI	RCATGY	2 cut(s)	836, 2155
XhoI	CTCGAG	1 cut(s)	215
XmiI	GTMKAC	2 cut(s)	1588, 1942

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.