FvH4_7g06621

Protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0011315
Physical Location & Seq
Forward (+)
6616845 .. 6626046
9202 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g06621.t1

Sequence Viewer

Length: 2643 bp
ATGGATGTTCAAGTGATTGATGTAAGAGCAGTAGGGCATAGTGGAATGGGAGATGATGGCGATGCCGAACGTAGTGAAGGTGGAGAGGTGAATAATGGTGAGACTCCTCAGGCTCATGTTGAGGAGGGGGAGATTCCTGAGCCCTATGTGGGCATGGAGTTCCATTCCGAAGAGGCTGCCAAGAATTTGTATGAGGAATATGCTAGACGGTTGGGTTTTAACTCCAAAGTTGGTCAGTCTAGTCGTTCTAATCCCGACGGAACAACCACTGCCAGGGAGTTTGTGTGTGGGAAAGAGGGTGTCAAGAGAAGACATGGTGATAGTTGCGACGCGATGCTTAGGATAGAGTCAAGGGGTGGTAACAGATGGGTTTCTACCAAGTTTGTCAAGGAGCATAGTCATGCATTAGCGAATCCTAGTCCCGTGCATTATCTCCGGCCTCGCCGCCATTTTGCTGGTGCTGCCAAGAATTTGGCCGAAGCTTATCAAGGAGTGGGGATTGTTCCCAGTGGTGTTATGTATGTCTCCATGGATGGGAACCGTGCATCTTTGGAGAAAAACCGTCTAGTTAGGAGTGCTTCATCTGCAGAATCAAATCGGCAAGTCAAGAATGCTGCTCCAGTAAATCCTATTCGGCCTTGTAGTCGAAGGAGGACATTGGGGAAGGATGCTCAGAATTTGCTGGAGTATTTCAAGAAAATGCAGGCTGAAAACCCTGGTTTCTTTTATGCAATACAACTTGATGAAGATAATCACATGGGTAACGTGTTTTGGTCGGATGCAAGGTCAAGAGCAGCTTACTCTCATTTTGGTGACGCTGTTACGCTTGATACTACATACAGAGTAAACCAGTATAGAGTGCCATTTGCTCCTTTTACCGGAGTGAACCATCATGGTCAGACAATCTTGTTTGGTTGTGCATTACTTCTAGATGAGTCAGAGGCATCTTTTAATTGGTTATTCAAGACATTCCTTACCGCTATGAATGATCGCCGACCTGTATCTATTACAACTGATCAAGACAGAGCCATACAGACAGCAGTTTCTCAGGTGTTTCCAGAAGTTCGCCACTGTATTAGCAAGTGGCATGTTTTGAGAGAAGGCCAGGAAAGGTTGGCTCACGTATGTCATGCACATCCTAATTTTCAGGTCGAACTTTATAACTGTATCAATTTGACTGAAACGATCGAGGAGTTTGAATTGTCTTGGGATTGTATCCTTGATAAGTATGATCTCAGGAGAAATGATTGGCTTCAATCGCTGTATAGTGCTCGTGCTCAATGGGTACCTGTGTATTTTCGGGATTCCTTTTTTGCTGCCATAGCTCCCAATCAAGGGTTTGAGGTTTCCTTCTTTGAAGGCTATGTGAATCAGCAGACGACATTACCATTGTTCTTTAGGCAGTATGAAAGAGCATTAGAGAACTGGTTTGAAAGGGAAGTAGAAGCTGACTTCGATACAATTTGCACTACACCAGTATTGAGAACACCATCACCCATGGAGAAACAAGCAGCCAATCTTTATACAAGAAAAATCTTCGCAAAATTTCAAGAAGAGCTGGTTGAAACTTTTGTGTACACGGCAAATAGAATTGAAGGTGATGGAGCTATCAGCACATTCAGAGTGGCAAAATTTGAGGATGACCACAAGGCGTACATTGTTACATTAAACTATCCAGAGATGAGAGCTAACTGTAGTTGTCAATTGTTTGAGTATTCAGGTATTCTATGTAGACATGTTTTAACAGTCTTTACAGTTACAAATGTGCTTACACTACCTTCCCATTACATTTTGAAACGATGGACAAGAAATGCAAAGAATGGAACTGGCCTAGATGAACGTAGTGGGGAGTTGCATGACCAAGAATCTCTGACATTACGGTATAACCATCTCTGTCGGGAAGCCATTAGATATGCAGAGGATGGGGCTACTACTATAGAAACTTATAATGCAGCAATGACTGCTCTTAGAGATGGTGGGAAGAAGGTTTCTGTTGTGAAGAGAAATGTAGCTAAAGTTACACCTCCTAGCTCTCAGGTTACTGGGACTGGCTATGAAGACAAGAAAAATTCTACATCAAATTCAGATATGACCCCTTTGTTGTGGCCACGCCAAGATGAAGTTATGAGGCGATTTAATCTTAATGATGCTGGTGCACCAGGTCAAAGTGTTTCTGATTTGAATTTGCCACGAATGGCCCCGGTGTCTCTTCTACGGGATGATGGTACTCCTGAGAATATGGTGGTACTTCCGCAGCTTAAGTCAATGACTTGGGTTATGGAGAACAAGAATTCAGCACCAGGAAATAGAGTAGCTGTCATTAATCTGAAGTTGCATGATTATAGCAGGATTCCATCAGTAGAATCAGAGGTTAAGTTTCAGCTCTCGAGGGTTTCATTGGAGCCAATGTTGAGGTCTATGGCCTACATTAGCGAGCAGCTCTCAACACCAGCTAATAAGGTTGCTGTTATAAATTTAAAGCTCCAAGACACAGATACAAGTACAGGGGAGTCAGAGGTTAAGTTTCAAGTGTCTAGGGATACATTAGGTGCCATGCTACGATCAATGGCCTATATCCGCGAGCAGCTTTCAACCTCTGGCGATGTCCCGTCAGAATCACAACCAAAAAAGCAGCGGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005911 GO:0009506 GO:0030054 GO:0055044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
COMM_domain FAR1 MULE SWIM

Protein Analysis

881

Amino Acids

99.53

Weight (kDa)

6.4

Isoelectric Point (pI)

48.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 63 - 137 4.9e-13 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 234 - 356 2.3e-11 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 274 - 365 1.7e-27 MULE transposase domain
SWIM PF04434 553 - 586 1.7e-08 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1161, 1947, 2471
Acc65I GGTACC 1 cut(s) 1285
AccB1I GGYRCC 2 cut(s) 1285, 2549
AccI GTMKAC 1 cut(s) 1732
AccII CGCG 2 cut(s) 332, 2580
AciI CCGC 5 cut(s) 445, 978, 2252, 2578, 2635
AcoI YGGCCR 2 cut(s) 474, 2105
AcuI CTGAAG 1 cut(s) 2348
AfaI GTAC 6 cut(s) 1287, 1577, 1655, 2227, 2247, 2503
AfiI CCNNNNNNNGG 6 cut(s) 149, 273, 534, 878, 1334, 1335
AflII CTTAAG 1 cut(s) 2258
AflIII ACRYGT 2 cut(s) 765, 1735
AjnI CCWGG 5 cut(s) 272, 715, 1104, 2158, 2299
Alw21I GWGCWC 3 cut(s) 1273, 1279, 2158
Alw26I GTCTC 3 cut(s) 95, 529, 2211
Alw44I GTGCAC 1 cut(s) 2154
Ama87I CYCGRG 1 cut(s) 2386
AoxI GGCC 9 cut(s) 437, 474, 635, 1102, 1828, 2105, 2196, 2421, 2568
ApaLI GTGCAC 1 cut(s) 2154
AseI ATTAAT 1 cut(s) 2322
Asp718I GGTACC 1 cut(s) 1285
AspS9I GGNCC 1 cut(s) 2197
AsuC2I CCSGG 1 cut(s) 2201
AsuHPI GGTGA 6 cut(s) 100, 110, 329, 824, 1485, 1610
AvaI CYCGRG 1 cut(s) 2386
AxyI CCTNAGG 1 cut(s) 108
BaeGI GKGCMC 1 cut(s) 2158
BaeI ACNNNNGTAYC 2 cut(s) 1277, 1310
BalI TGGCCA 1 cut(s) 2107
BanI GGYRCC 2 cut(s) 1285, 2549
BanII GRGCYC 1 cut(s) 144
BauI CACGAG 1 cut(s) 1272
BbsI GAAGAC 2 cut(s) 316, 2064
Bbv12I GWGCWC 3 cut(s) 1273, 1279, 2158
BceAI ACGGC 1 cut(s) 1596
BcgI CGANNNNNNTGC 2 cut(s) 158, 192
BciT130I CCWGG 5 cut(s) 274, 717, 1106, 2160, 2301
BciVI GTATCC 2 cut(s) 1226, 2533
BclI TGATCA 1 cut(s) 1015
BcnI CCSGG 1 cut(s) 2201
BcoDI GTCTC 3 cut(s) 95, 529, 2211
BfaI CTAG 8 cut(s) 204, 240, 417, 566, 929, 1832, 2028, 2535
BfmI CTRYAG 3 cut(s) 585, 1693, 1935
BfrI CTTAAG 1 cut(s) 2258
BfuI GTATCC 2 cut(s) 1226, 2533
Bme1390I CCNGG 6 cut(s) 274, 717, 1106, 2160, 2201, 2301
BmeT110I CYCGRG 1 cut(s) 2386
BmgT120I GGNCC 1 cut(s) 2197
BmiI GGNNCC 5 cut(s) 539, 1287, 2199, 2403, 2551
BmrFI CCNGG 6 cut(s) 274, 717, 1106, 2160, 2201, 2301
BmrI ACTGGG 2 cut(s) 501, 2052
BmsI GCATC 7 cut(s) 52, 324, 554, 658, 769, 953, 2137
BmuI ACTGGG 2 cut(s) 501, 2052
BpiI GAAGAC 2 cut(s) 316, 2064
BplI GAGNNNNNCTC 2 cut(s) 2426, 2458
BpmI CTGGAG 2 cut(s) 603, 704
Bpu10I CCTNAGC 2 cut(s) 138, 338
BpuMI CCSGG 1 cut(s) 2201
BsaAI YACGTR 1 cut(s) 1123
BsaJI CCNNGG 5 cut(s) 273, 528, 715, 1497, 2199
BsaWI WCCGGW 1 cut(s) 878
BsaXI ACNNNNNCTCC 4 cut(s) 269, 299, 2393, 2423
Bsc4I CCNNNNNNNGG 6 cut(s) 149, 273, 534, 878, 1334, 1335
Bse1I ACTGG 8 cut(s) 507, 620, 850, 1430, 1475, 1831, 2047, 2053
Bse21I CCTNAGG 1 cut(s) 108
Bse3DI GCAATG 1 cut(s) 1962
BseBI CCWGG 5 cut(s) 274, 717, 1106, 2160, 2301
BseDI CCNNGG 5 cut(s) 273, 528, 715, 1497, 2199
BseGI GGATG 8 cut(s) 10, 538, 673, 784, 1135, 1645, 1927, 2224
BseLI CCNNNNNNNGG 6 cut(s) 149, 273, 534, 878, 1334, 1335
BseMI GCAATG 1 cut(s) 1962
BseMII CTCAG 7 cut(s) 122, 129, 686, 1061, 1249, 2048, 2223
BseNI ACTGG 8 cut(s) 507, 620, 850, 1430, 1475, 1831, 2047, 2053
BseRI GAGGAG 3 cut(s) 96, 137, 1205
BseSI GKGCMC 1 cut(s) 2158
Bsh1236I CGCG 2 cut(s) 332, 2580
Bsh1285I CGRYCG 1 cut(s) 1188
BshFI GGCC 9 cut(s) 439, 476, 637, 1104, 1830, 2107, 2198, 2423, 2570
BshNI GGYRCC 2 cut(s) 1285, 2549
BsiEI CGRYCG 1 cut(s) 1188
BsiHKAI GWGCWC 3 cut(s) 1273, 1279, 2158
BsiHKCI CYCGRG 1 cut(s) 2386
BsiSI CCGG 3 cut(s) 436, 879, 2201
BslFI GGGAC 3 cut(s) 405, 2059, 2591
BslI CCNNNNNNNGG 6 cut(s) 149, 273, 534, 878, 1334, 1335
BsmAI GTCTC 3 cut(s) 95, 529, 2211
BsmFI GGGAC 3 cut(s) 405, 2059, 2591
BsmI GAATGC 1 cut(s) 616
BsnI GGCC 9 cut(s) 439, 476, 637, 1104, 1830, 2107, 2198, 2423, 2570
BsoBI CYCGRG 1 cut(s) 2386
Bsp1286I GDGCHC 4 cut(s) 144, 1273, 1279, 2158
Bsp1407I TGTACA 1 cut(s) 1575
Bsp143I GATC 5 cut(s) 988, 1015, 1185, 1231, 2561
Bsp19I CCATGG 2 cut(s) 528, 1497
BspACI CCGC 5 cut(s) 445, 978, 2252, 2578, 2635
BspANI GGCC 9 cut(s) 439, 476, 637, 1104, 1830, 2107, 2198, 2423, 2570
BspCNI CTCAG 7 cut(s) 121, 130, 685, 1060, 1248, 2047, 2224
BspFNI CGCG 2 cut(s) 332, 2580
BspLI GGNNCC 5 cut(s) 539, 1287, 2199, 2403, 2551
BspMAI CTGCAG 1 cut(s) 589
BspQI GCTCTTC 1 cut(s) 1548
BspT107I GGYRCC 2 cut(s) 1285, 2549
BspTI CTTAAG 1 cut(s) 2258
BsrDI GCAATG 1 cut(s) 1962
BsrGI TGTACA 1 cut(s) 1575
BsrI ACTGG 8 cut(s) 507, 620, 850, 1430, 1475, 1831, 2047, 2053
BssECI CCNNGG 5 cut(s) 273, 528, 715, 1497, 2199
BssMI GATC 5 cut(s) 988, 1015, 1185, 1231, 2561
BssSI CACGAG 1 cut(s) 1272
BssT1I CCWWGG 2 cut(s) 528, 1497
Bst2BI CACGAG 1 cut(s) 1272
Bst2UI CCWGG 5 cut(s) 274, 717, 1106, 2160, 2301
Bst4CI ACNGT 9 cut(s) 210, 542, 563, 1073, 1166, 1694, 1747, 1756, 1881
Bst6I CTCTTC 4 cut(s) 165, 1548, 1994, 2214
BstAFI CTTAAG 1 cut(s) 2258
BstAPI GCANNNNNTGC 1 cut(s) 1961
BstAUI TGTACA 1 cut(s) 1575
BstBAI YACGTR 1 cut(s) 1123
BstC8I GCNNGC 3 cut(s) 705, 2435, 2582
BstDEI CTNAG 9 cut(s) 108, 138, 338, 672, 1047, 1235, 1967, 2034, 2232
BstDSI CCRYGG 2 cut(s) 528, 1497
BstF5I GGATG 8 cut(s) 10, 538, 673, 784, 1135, 1645, 1927, 2224
BstFNI CGCG 2 cut(s) 332, 2580
BstKTI GATC 5 cut(s) 991, 1018, 1188, 1234, 2564
BstMAI GTCTC 3 cut(s) 95, 529, 2211
BstMBI GATC 5 cut(s) 988, 1015, 1185, 1231, 2561
BstMCI CGRYCG 1 cut(s) 1188
BstMWI GCNNNNNNNGC 5 cut(s) 461, 584, 1258, 1322, 1961
BstNI CCWGG 5 cut(s) 274, 717, 1106, 2160, 2301
BstNSI RCATGY 2 cut(s) 1091, 1739
BstSCI CCNGG 6 cut(s) 272, 715, 1104, 2158, 2199, 2299
BstSFI CTRYAG 3 cut(s) 585, 1693, 1935
BstSLI GKGCMC 1 cut(s) 2158
BstUI CGCG 2 cut(s) 332, 2580
BstV2I GAAGAC 2 cut(s) 316, 2064
BstXI CCANNNNNNTGG 2 cut(s) 455, 472
Bsu36I CCTNAGG 1 cut(s) 108
BsuI GTATCC 2 cut(s) 1226, 2533
BsuRI GGCC 9 cut(s) 439, 476, 637, 1104, 1830, 2107, 2198, 2423, 2570
BtgI CCRYGG 2 cut(s) 528, 1497
BtgZI GCGATG 3 cut(s) 75, 347, 2616
BtsCI GGATG 8 cut(s) 10, 538, 673, 784, 1135, 1645, 1927, 2224
BtsI GCAGTG 1 cut(s) 267
BtsIMutI CAGTG 3 cut(s) 267, 514, 1069
Cac8I GCNNGC 3 cut(s) 705, 2435, 2582
Cfr13I GGNCC 1 cut(s) 2197
CseI GACGC 2 cut(s) 338, 824
CsiI ACCWGGT 1 cut(s) 2158
Csp6I GTAC 6 cut(s) 1286, 1576, 1654, 2226, 2246, 2502
CviQI GTAC 6 cut(s) 1286, 1576, 1654, 2226, 2246, 2502
DdeI CTNAG 9 cut(s) 108, 138, 338, 672, 1047, 1235, 1967, 2034, 2232
DpnI GATC 5 cut(s) 990, 1017, 1187, 1233, 2563
DpnII GATC 5 cut(s) 988, 1015, 1185, 1231, 2561
DraI TTTAAA 1 cut(s) 2478
EaeI YGGCCR 2 cut(s) 474, 2105
Eam1104I CTCTTC 4 cut(s) 165, 1548, 1994, 2214
EarI CTCTTC 4 cut(s) 165, 1548, 1994, 2214
Eco130I CCWWGG 2 cut(s) 528, 1497
Eco24I GRGCYC 1 cut(s) 144
Eco57I CTGAAG 1 cut(s) 2348
Eco81I CCTNAGG 1 cut(s) 108
Eco88I CYCGRG 1 cut(s) 2386
EcoRI GAATTC 1 cut(s) 2290
EcoRII CCWGG 5 cut(s) 272, 715, 1104, 2158, 2299
EcoT14I CCWWGG 2 cut(s) 528, 1497
EcoT22I ATGCAT 1 cut(s) 406
EcoT38I GRGCYC 1 cut(s) 144
ErhI CCWWGG 2 cut(s) 528, 1497
FalI AAGNNNNNCTT 2 cut(s) 781, 813
FaqI GGGAC 3 cut(s) 405, 2059, 2591
FbaI TGATCA 1 cut(s) 1015
FblI GTMKAC 1 cut(s) 1732
FokI GGATG 8 cut(s) 17, 545, 680, 791, 1122, 1652, 1934, 2231
FriOI GRGCYC 1 cut(s) 144
FspBI CTAG 8 cut(s) 204, 240, 417, 566, 929, 1832, 2028, 2535
GsuI CTGGAG 2 cut(s) 603, 704
HaeIII GGCC 9 cut(s) 439, 476, 637, 1104, 1830, 2107, 2198, 2423, 2570
HapII CCGG 3 cut(s) 436, 879, 2201
HgaI GACGC 2 cut(s) 338, 824
HindIII AAGCTT 1 cut(s) 480
HpaII CCGG 3 cut(s) 436, 879, 2201
HphI GGTGA 6 cut(s) 100, 110, 329, 824, 1485, 1610
Hpy166II GTNNAC 6 cut(s) 847, 886, 1576, 1578, 1733, 2156
Hpy8I GTNNAC 6 cut(s) 847, 886, 1576, 1578, 1733, 2156
Hpy99I CGWCG 2 cut(s) 260, 332
HpyAV CCTTC 9 cut(s) 71, 642, 658, 1094, 1352, 1360, 1589, 1788, 1978
HpyCH4III ACNGT 9 cut(s) 210, 542, 563, 1073, 1166, 1694, 1747, 1756, 1881
HpyCH4IV ACGT 4 cut(s) 70, 765, 1122, 1840
HpyF10VI GCNNNNNNNGC 5 cut(s) 461, 584, 1258, 1322, 1961
HpyF3I CTNAG 9 cut(s) 108, 138, 338, 672, 1047, 1235, 1967, 2034, 2232
HpySE526I ACGT 4 cut(s) 70, 765, 1122, 1840
KpnI GGTACC 1 cut(s) 1289
Ksp22I TGATCA 1 cut(s) 1015
Kzo9I GATC 5 cut(s) 988, 1015, 1185, 1231, 2561
LguI GCTCTTC 1 cut(s) 1548
LmnI GCTCC 7 cut(s) 391, 622, 874, 1330, 1604, 2401, 2487
LweI GCATC 7 cut(s) 52, 324, 554, 658, 769, 953, 2137
MabI ACCWGGT 1 cut(s) 2158
MaeI CTAG 8 cut(s) 204, 240, 417, 566, 929, 1832, 2028, 2535
MaeII ACGT 4 cut(s) 70, 765, 1122, 1840
MaeIII GTNAC 8 cut(s) 359, 761, 812, 820, 1660, 1756, 2017, 2038
MalI GATC 5 cut(s) 990, 1017, 1187, 1233, 2563
MboI GATC 5 cut(s) 988, 1015, 1185, 1231, 2561
MboII GAAGA 9 cut(s) 182, 321, 758, 1528, 1565, 1993, 2011, 2069, 2201
MfeI CAATTG 1 cut(s) 1703
MhlI GDGCHC 4 cut(s) 144, 1273, 1279, 2158
MlsI TGGCCA 1 cut(s) 2107
MluNI TGGCCA 1 cut(s) 2107
MlyI GAGTC 4 cut(s) 97, 356, 944, 2519
MmeI TCCRAC 1 cut(s) 756
Mox20I TGGCCA 1 cut(s) 2107
Mph1103I ATGCAT 1 cut(s) 406
MscI TGGCCA 1 cut(s) 2107
MslI CAYNNNNRTG 2 cut(s) 399, 810
Msp20I TGGCCA 1 cut(s) 2107
MspA1I CMGCKG 1 cut(s) 2635
MspCI CTTAAG 1 cut(s) 2258
MspI CCGG 3 cut(s) 436, 879, 2201
MspR9I CCNGG 6 cut(s) 274, 717, 1106, 2160, 2201, 2301
MunI CAATTG 1 cut(s) 1703
Mva1269I GAATGC 1 cut(s) 616
MvaI CCWGG 5 cut(s) 274, 717, 1106, 2160, 2301
MvnI CGCG 2 cut(s) 332, 2580
MwoI GCNNNNNNNGC 5 cut(s) 461, 584, 1258, 1322, 1961
NciI CCSGG 1 cut(s) 2201
NcoI CCATGG 2 cut(s) 528, 1497
NdeII GATC 5 cut(s) 988, 1015, 1185, 1231, 2561
NlaIV GGNNCC 5 cut(s) 539, 1287, 2199, 2403, 2551
NmuCI GTSAC 1 cut(s) 812
NsiI ATGCAT 1 cut(s) 406
NspI RCATGY 2 cut(s) 1091, 1739
PaeR7I CTCGAG 1 cut(s) 2386
PciI ACATGT 1 cut(s) 1735
PciSI GCTCTTC 1 cut(s) 1548
PctI GAATGC 1 cut(s) 616
PfeI GAWTC 9 cut(s) 133, 412, 590, 1304, 1369, 1865, 2350, 2363, 2615
Ple19I CGATCG 1 cut(s) 1188
PleI GAGTC 4 cut(s) 97, 355, 943, 2518
PpsI GAGTC 4 cut(s) 97, 355, 943, 2518
Ppu21I YACGTR 1 cut(s) 1123
PscI ACATGT 1 cut(s) 1735
PshBI ATTAAT 1 cut(s) 2322
PsiI TTATAA 3 cut(s) 1161, 1947, 2471
Psp6I CCWGG 5 cut(s) 272, 715, 1104, 2158, 2299
PspGI CCWGG 5 cut(s) 272, 715, 1104, 2158, 2299
PspN4I GGNNCC 5 cut(s) 539, 1287, 2199, 2403, 2551
PspPI GGNCC 1 cut(s) 2197
PstI CTGCAG 1 cut(s) 589
PvuI CGATCG 1 cut(s) 1188
RsaI GTAC 6 cut(s) 1287, 1577, 1655, 2227, 2247, 2503
RsaNI GTAC 6 cut(s) 1286, 1576, 1654, 2226, 2246, 2502
RseI CAYNNNNRTG 2 cut(s) 399, 810
SapI GCTCTTC 1 cut(s) 1548
Sau3AI GATC 5 cut(s) 988, 1015, 1185, 1231, 2561
Sau96I GGNCC 1 cut(s) 2197
SchI GAGTC 4 cut(s) 97, 356, 944, 2519
ScrFI CCNGG 6 cut(s) 274, 717, 1106, 2160, 2201, 2301
SduI GDGCHC 4 cut(s) 144, 1273, 1279, 2158
SexAI ACCWGGT 1 cut(s) 2158
SfaNI GCATC 7 cut(s) 52, 324, 554, 658, 769, 953, 2137
SfcI CTRYAG 3 cut(s) 585, 1693, 1935
Sfr274I CTCGAG 1 cut(s) 2386
SlaI CTCGAG 1 cut(s) 2386
SmiMI CAYNNNNRTG 2 cut(s) 399, 810
SmlI CTYRAG 2 cut(s) 2258, 2386
SmoI CTYRAG 2 cut(s) 2258, 2386
SsiI CCGC 5 cut(s) 445, 978, 2252, 2578, 2635
SspMI CTAG 8 cut(s) 204, 240, 417, 566, 929, 1832, 2028, 2535
StyD4I CCNGG 6 cut(s) 272, 715, 1104, 2158, 2199, 2299
StyI CCWWGG 2 cut(s) 528, 1497
TaaI ACNGT 9 cut(s) 210, 542, 563, 1073, 1166, 1694, 1747, 1756, 1881
TaiI ACGT 4 cut(s) 73, 768, 1125, 1843
TaqI TCGA 5 cut(s) 646, 1152, 1188, 1455, 2387
TatI WGTACW 2 cut(s) 1575, 2501
TauI GCSGC 1 cut(s) 447
TfiI GAWTC 9 cut(s) 133, 412, 590, 1304, 1369, 1865, 2350, 2363, 2615
TscAI CASTG 3 cut(s) 274, 514, 1076
TseFI GTSAC 1 cut(s) 812
Tsp45I GTSAC 1 cut(s) 812
TspDTI ATGAA 8 cut(s) 570, 759, 998, 1422, 1851, 2070, 2133, 2385
TspGWI ACGGA 1 cut(s) 273
TspRI CASTG 3 cut(s) 274, 514, 1076
Vha464I CTTAAG 1 cut(s) 2258
VneI GTGCAC 1 cut(s) 2154
VspI ATTAAT 1 cut(s) 2322
XbaI TCTAGA 1 cut(s) 928
XceI RCATGY 2 cut(s) 1091, 1739
XhoI CTCGAG 1 cut(s) 2386
XmiI GTMKAC 1 cut(s) 1732
XspI CTAG 8 cut(s) 204, 240, 417, 566, 929, 1832, 2028, 2535
Zsp2I ATGCAT 1 cut(s) 406
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.