RchiOBHm_Chr1g0335301

Protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0011315
Physical Location & Seq
Forward (+)
27562689 .. 27569644
6956 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56394

Sequence Viewer

Length: 2643 bp
ATGGATGTTCAAGTGATTGATGTACCAGCAGTAGGGCATGGTGGAATGGGAGATGAAGGTGATGCTGAACGTAGTGAAGGTGGAGAAGTCAATAATGGTGAAAATACTCAGGCTCATGACGAGGAGGGGGAGATTCCTGAGCCATATGTGGGTATGGAATTTCACTCCGAAGATGCTGCCAAGAATTTGTATGACGAATACGCCAGACGTCTGGGTTTTAACTCGAAAGTTGGTCAATCTAGTCGTTCTAATCCTGACGGAACAACCACTGCCCGTGAGTTTGTGTGTGGCAGAGAGGGTTTGAAAAGAAGACATGCTGATAGTTGTGACGCAATGCTTAGGATAGAGTCTAAGGGTCCGGACAGATGGCTTGCGACAAAGTTTGTCAAGGAGCATAGTCATGCATTAGTGAGTCCTGGTCCCGTGCATTATCTCAGGCCTCGCCGGCATTTTGCTGGTGCTGCCAAGAACGTGGCTGAAGCATATCAAGGGGTGGGGATTGTTCCCAGTGGTGTTATGTATGTCTCCATGGATGGAAATCGTGCATCTGGAGAGAAAAACCGTTTAGTTAGGAATACTTCATCTGCAGAATCAAATCGACAAGTTAAAAATGCTGCTGCAGTAAATTCTATTCGGCCATCTACTCGAAGGAGGACATTAGGGAAGGATGCTCAGAATTTGCTGGAGTATTTCAAGAAAATGCAGGCTGCGAACCCTGGTTTCTTTTATGCCATACAACTTGATGAAGATAATCACATGGGTAATGTGTTTTGGTCAGATGCAAGGTCAAGAGCAGCTTACTCTCATTTTGGTGATGCTGTTACGCTTGATACGACATACAGAGTAAATCAGTATAGAGTGCCATTTGCTCCATTTACTGGAGTGAACCATCATGGTCAGACAATTTTGTTTGGTTGTGCATTACTCCTAGATGAGTCAGAAGCATCTTTTATTTGGTTATTCAAGACATTCCTTACCGCAATGAATGATTGCCCACCTGTATCTATTATGACTGATCAAGACAGAGCCATACAGACAGCAGTTTCCCAGGTGTTTCCGGAAGTTCGCCACTGCATTAGCAAGTGGCATGTTTTGAGAGAAGGCCAGGAAAGGTTGGCTCACGTATGCCATGCACATCCCAATTTTCAGGTGGAACTTTATAATTGTATCAATTTGACTGAAACAATTGAGGAGTTTGAATTGTCTTGGGGTTGTATCCTTGATAAGTATGATCTCAGGAGAAATGATTGGCTTCAATCGTTATATAGTGCTCGTGCTCAATGGGTACCTGTGTATTTCCGGGATTCCTTTTTTGCCACCATATCTCCCAATCAAGGGTATGATGGTTCCTTTTTTGAAGGCTATGTGAATCAGCAGACCACATTACCAATGTTCTTTAGGCAGTATGAAAGAGCATTGGAGAACTGGTTTGAAAGGGAAGTGGAAGCTGACTTCGATACAATCTGCACTACACCAGTATTGAGAACACCATCGCCCATGGAGAAACAGGCAGCCAATCTGTATACAAGAAAAATTTTTGCAAAATTTCAAGAAGAGCTAGTTGAAACTTTTGTATACACAGCAAATAGAATTGAAGGTGATGGAGCTATTAGCACATTCAGAGTTGCAAAATTTGAGGATGACCACAAGGCCTACATCGTTACATTAAACTATCCTGAGATGAGAGCCAACTGTAGTTGTCAATTGTTTGAGTATTTAGGTATTCTCTGTAGACATGTTTTAACAGTCTTTACAGTTACAAATGTGCTTACACTACCTTCCCATTACATTTTGAAACGATGGACAAGAAATGCAAAGAATGGAACTAGCCTAGATGAACGTAGTGGTGAGTTGCATGACCAAGATTCTCTAACATTACGGTATAACAATCTGTGTCGGGAAGCCATTAGATATGCAGAGGATGGGGCTACTACTACAGAAACTTATAATGCAGCAATGACTGCTCTTCGAGATGGTGGGAAGAAGGTTTCTGTTGTGAAGAGAAATGTAGCTAAAGTTGCACCTCCTAGCTCTCAGGTTACTGGGACGGGCTATGAGGACAAGAAAAACTCTACATCAAATTCAGATATGACCCCTTTGTTGTGGCCACGCCAGGATGAAGTTATGAGGCGATTTAATCTTAATGATGCTGGGGCACCAGCTCAAACTGTTTCTGATTTGAATTTGCCACGAATGGCCCCCGTTTCCCTTCTACGGGATGATGGTACTCCTGAGAATATGGTGGTACTTCCGCATCTTAAGTCAATGACTTGGGTTATGGAGAACAAAAATTCAGCACCAGGAAATAGAGTAGCTGTCATTAACCTCAAGTTGCAAGATTATAGCAGGACTCCGTCAGCAGAATCAGAGGTTAAGTTTCAGCTCTCAAGGGTTTCATTGGAGCCAATGTTGAGGTCTATGGCCTACATTAGTGATCAGCTCTCAACACCAGCTAATAAGGTCGCTGTTATAAATTTAAAGCTTCAAGACACAGAGACAACTACAGGGGAGTCAGAGGTTAAGTTTCAAGTGTCTAGGGATACATTAGGTGCCATGCTACGATCAATGGCCTATATCCGCGAGCAGCTTTCAACCGCTGGCGAGGTCCATTCAGATTCCCAACCTAAAAAGCAGCGGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005911 GO:0009506 GO:0030054 GO:0055044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
COMM_domain FAR1 MULE SWIM

Protein Analysis

880

Amino Acids

99.28

Weight (kDa)

6.19

Isoelectric Point (pI)

46.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 63 - 137 2.4e-13 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 237 - 356 2.9e-11 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 274 - 365 2.6e-27 MULE transposase domain
SWIM PF04434 553 - 586 3.1e-08 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1161, 1947, 2471
AatII GACGTC 1 cut(s) 211
Acc65I GGTACC 1 cut(s) 1285
AccB1I GGYRCC 3 cut(s) 1285, 2155, 2549
AccB7I CCANNNNNTGG 1 cut(s) 878
AccI GTMKAC 3 cut(s) 1523, 1575, 1732
AccII CGCG 1 cut(s) 2580
AccIII TCCGGA 2 cut(s) 358, 1057
AciI CCGC 5 cut(s) 978, 2252, 2578, 2595, 2635
AcoI YGGCCR 2 cut(s) 635, 2105
AcuI CTGAAG 1 cut(s) 498
AcyI GRCGYC 1 cut(s) 208
AfaI GTAC 4 cut(s) 24, 1287, 2227, 2247
AfiI CCNNNNNNNGG 7 cut(s) 32, 149, 878, 1334, 1335, 2214, 2215
AflII CTTAAG 1 cut(s) 2258
AflIII ACRYGT 1 cut(s) 1735
AjnI CCWGG 6 cut(s) 415, 715, 1047, 1104, 2112, 2299
Alw21I GWGCWC 2 cut(s) 1273, 1279
Alw26I GTCTC 2 cut(s) 529, 2489
Aor13HI TCCGGA 2 cut(s) 358, 1057
AoxI GGCC 8 cut(s) 437, 635, 1102, 1650, 2105, 2196, 2421, 2568
Asp718I GGTACC 1 cut(s) 1285
AspS9I GGNCC 4 cut(s) 356, 419, 2197, 2605
AsuC2I CCSGG 1 cut(s) 1301
AsuHPI GGTGA 5 cut(s) 71, 110, 824, 1610, 1859
AvaII GGWCC 3 cut(s) 356, 419, 2605
BaeGI GKGCMC 1 cut(s) 2158
BaeI ACNNNNGTAYC 2 cut(s) 1277, 1310
BalI TGGCCA 1 cut(s) 2107
BanI GGYRCC 3 cut(s) 1285, 2155, 2549
BauI CACGAG 1 cut(s) 1272
BbsI GAAGAC 1 cut(s) 316
Bbv12I GWGCWC 2 cut(s) 1273, 1279
BbvI GCAGC 9 cut(s) 163, 448, 601, 604, 694, 806, 1523, 1964, 2596
BcgI CGANNNNNNTGC 2 cut(s) 158, 192
BciT130I CCWGG 6 cut(s) 417, 717, 1049, 1106, 2114, 2301
BciVI GTATCC 2 cut(s) 1226, 2533
BclI TGATCA 2 cut(s) 1015, 2434
BcnI CCSGG 1 cut(s) 1301
BcoDI GTCTC 2 cut(s) 529, 2489
BfaI CTAG 7 cut(s) 240, 929, 1559, 1827, 1832, 2028, 2535
BfmI CTRYAG 6 cut(s) 585, 618, 1693, 1729, 1935, 2502
BfrI CTTAAG 1 cut(s) 2258
BfuI GTATCC 2 cut(s) 1226, 2533
BglI GCCNNNNNGGC 1 cut(s) 445
Bme1390I CCNGG 7 cut(s) 417, 717, 1049, 1106, 1301, 2114, 2301
Bme18I GGWCC 3 cut(s) 356, 419, 2605
BmgT120I GGNCC 4 cut(s) 356, 419, 2197, 2605
BmiI GGNNCC 8 cut(s) 357, 421, 1287, 1348, 2157, 2199, 2403, 2551
BmrFI CCNGG 7 cut(s) 417, 717, 1049, 1106, 1301, 2114, 2301
BmrI ACTGGG 2 cut(s) 501, 2052
BmsI GCATC 9 cut(s) 52, 163, 554, 658, 769, 805, 953, 2137, 2263
BmuI ACTGGG 2 cut(s) 501, 2052
BpiI GAAGAC 1 cut(s) 316
BpmI CTGGAG 3 cut(s) 570, 704, 900
Bpu10I CCTNAGC 2 cut(s) 138, 338
BpuEI CTTGAG 2 cut(s) 2312, 2371
BpuMI CCSGG 1 cut(s) 1301
BsaAI YACGTR 1 cut(s) 1123
BsaBI GATNNNNATC 1 cut(s) 537
BsaHI GRCGYC 1 cut(s) 208
BsaJI CCNNGG 4 cut(s) 528, 715, 1047, 1497
BsaWI WCCGGW 2 cut(s) 358, 1057
BsaXI ACNNNNNCTCC 6 cut(s) 1309, 1339, 1412, 1442, 2393, 2423
Bsc4I CCNNNNNNNGG 7 cut(s) 32, 149, 878, 1334, 1335, 2214, 2215
Bse118I RCCGGY 1 cut(s) 444
Bse1I ACTGG 5 cut(s) 507, 883, 1430, 1475, 2047
Bse3DI GCAATG 3 cut(s) 339, 987, 1962
Bse8I GATNNNNATC 1 cut(s) 537
BseAI TCCGGA 2 cut(s) 358, 1057
BseBI CCWGG 6 cut(s) 417, 717, 1049, 1106, 2114, 2301
BseDI CCNNGG 4 cut(s) 528, 715, 1047, 1497
BseGI GGATG 8 cut(s) 10, 538, 673, 1135, 1645, 1927, 2122, 2224
BseJI GATNNNNATC 1 cut(s) 537
BseLI CCNNNNNNNGG 7 cut(s) 32, 149, 878, 1334, 1335, 2214, 2215
BseMI GCAATG 3 cut(s) 339, 987, 1962
BseMII CTCAG 8 cut(s) 122, 129, 448, 686, 1249, 1668, 2048, 2223
BseNI ACTGG 5 cut(s) 507, 883, 1430, 1475, 2047
BseRI GAGGAG 2 cut(s) 137, 1205
BseSI GKGCMC 1 cut(s) 2158
BseXI GCAGC 9 cut(s) 163, 448, 601, 604, 694, 806, 1523, 1964, 2596
BseYI CCCAGC 1 cut(s) 2150
BsgI GTGCAG 1 cut(s) 1450
Bsh1236I CGCG 1 cut(s) 2580
BshFI GGCC 8 cut(s) 439, 637, 1104, 1652, 2107, 2198, 2423, 2570
BshNI GGYRCC 3 cut(s) 1285, 2155, 2549
BsiHKAI GWGCWC 2 cut(s) 1273, 1279
BsiSI CCGG 4 cut(s) 359, 445, 1058, 1300
BslFI GGGAC 2 cut(s) 405, 2059
BslI CCNNNNNNNGG 7 cut(s) 32, 149, 878, 1334, 1335, 2214, 2215
BsmAI GTCTC 2 cut(s) 529, 2489
BsmFI GGGAC 2 cut(s) 405, 2059
BsnI GGCC 8 cut(s) 439, 637, 1104, 1652, 2107, 2198, 2423, 2570
Bsp1286I GDGCHC 3 cut(s) 1273, 1279, 2158
Bsp13I TCCGGA 2 cut(s) 358, 1057
Bsp143I GATC 4 cut(s) 1015, 1231, 2434, 2561
Bsp19I CCATGG 2 cut(s) 528, 1497
BspACI CCGC 5 cut(s) 978, 2252, 2578, 2595, 2635
BspANI GGCC 8 cut(s) 439, 637, 1104, 1652, 2107, 2198, 2423, 2570
BspCNI CTCAG 8 cut(s) 121, 130, 447, 685, 1248, 1669, 2047, 2224
BspEI TCCGGA 2 cut(s) 358, 1057
BspFNI CGCG 1 cut(s) 2580
BspHI TCATGA 1 cut(s) 115
BspLI GGNNCC 8 cut(s) 357, 421, 1287, 1348, 2157, 2199, 2403, 2551
BspMAI CTGCAG 2 cut(s) 589, 622
BspQI GCTCTTC 2 cut(s) 1548, 1971
BspT107I GGYRCC 3 cut(s) 1285, 2155, 2549
BspTI CTTAAG 1 cut(s) 2258
BsrDI GCAATG 3 cut(s) 339, 987, 1962
BsrFI RCCGGY 1 cut(s) 444
BsrI ACTGG 5 cut(s) 507, 883, 1430, 1475, 2047
BssAI RCCGGY 1 cut(s) 444
BssECI CCNNGG 4 cut(s) 528, 715, 1047, 1497
BssMI GATC 4 cut(s) 1015, 1231, 2434, 2561
BssNAI GTATAC 2 cut(s) 1524, 1576
BssNI GRCGYC 1 cut(s) 208
BssSI CACGAG 1 cut(s) 1272
BssT1I CCWWGG 2 cut(s) 528, 1497
Bst1107I GTATAC 2 cut(s) 1524, 1576
Bst2BI CACGAG 1 cut(s) 1272
Bst2UI CCWGG 6 cut(s) 417, 717, 1049, 1106, 2114, 2301
Bst4CI ACNGT 6 cut(s) 563, 1694, 1747, 1756, 1881, 2170
Bst6I CTCTTC 3 cut(s) 1548, 1971, 1994
BstACI GRCGYC 1 cut(s) 208
BstAFI CTTAAG 1 cut(s) 2258
BstAPI GCANNNNNTGC 1 cut(s) 1961
BstBAI YACGTR 1 cut(s) 1123
BstC8I GCNNGC 5 cut(s) 372, 446, 705, 2582, 2599
BstDSI CCRYGG 2 cut(s) 528, 1497
BstF5I GGATG 8 cut(s) 10, 538, 673, 1135, 1645, 1927, 2122, 2224
BstFNI CGCG 1 cut(s) 2580
BstKTI GATC 4 cut(s) 1018, 1234, 2437, 2564
BstMAI GTCTC 2 cut(s) 529, 2489
BstMBI GATC 4 cut(s) 1015, 1231, 2434, 2561
BstMWI GCNNNNNNNGC 4 cut(s) 445, 461, 1961, 2018
BstNI CCWGG 6 cut(s) 417, 717, 1049, 1106, 2114, 2301
BstNSI RCATGY 3 cut(s) 317, 1091, 1739
BstSCI CCNGG 7 cut(s) 415, 715, 1047, 1104, 1299, 2112, 2299
BstSFI CTRYAG 6 cut(s) 585, 618, 1693, 1729, 1935, 2502
BstSLI GKGCMC 1 cut(s) 2158
BstUI CGCG 1 cut(s) 2580
BstV1I GCAGC 9 cut(s) 163, 448, 601, 604, 694, 806, 1523, 1964, 2596
BstV2I GAAGAC 1 cut(s) 316
BstXI CCANNNNNNTGG 2 cut(s) 211, 472
BstZ17I GTATAC 2 cut(s) 1524, 1576
BsuI GTATCC 2 cut(s) 1226, 2533
BsuRI GGCC 8 cut(s) 439, 637, 1104, 1652, 2107, 2198, 2423, 2570
BtgI CCRYGG 2 cut(s) 528, 1497
BtgZI GCGATG 1 cut(s) 1476
BtsCI GGATG 8 cut(s) 10, 538, 673, 1135, 1645, 1927, 2122, 2224
BtsI GCAGTG 2 cut(s) 267, 1069
BtsIMutI CAGTG 3 cut(s) 267, 514, 1069
Cac8I GCNNGC 5 cut(s) 372, 446, 705, 2582, 2599
CciI TCATGA 1 cut(s) 115
Cfr10I RCCGGY 1 cut(s) 444
Cfr13I GGNCC 4 cut(s) 356, 419, 2197, 2605
CseI GACGC 1 cut(s) 338
Csp6I GTAC 4 cut(s) 23, 1286, 2226, 2246
CviQI GTAC 4 cut(s) 23, 1286, 2226, 2246
DpnI GATC 4 cut(s) 1017, 1233, 2436, 2563
DpnII GATC 4 cut(s) 1015, 1231, 2434, 2561
DraI TTTAAA 1 cut(s) 2478
EaeI YGGCCR 2 cut(s) 635, 2105
Eam1104I CTCTTC 3 cut(s) 1548, 1971, 1994
EarI CTCTTC 3 cut(s) 1548, 1971, 1994
Eco130I CCWWGG 2 cut(s) 528, 1497
Eco147I AGGCCT 2 cut(s) 439, 1652
Eco47I GGWCC 3 cut(s) 356, 419, 2605
Eco57I CTGAAG 1 cut(s) 498
EcoRII CCWGG 6 cut(s) 415, 715, 1047, 1104, 2112, 2299
EcoT14I CCWWGG 2 cut(s) 528, 1497
EcoT22I ATGCAT 1 cut(s) 406
ErhI CCWWGG 2 cut(s) 528, 1497
FalI AAGNNNNNCTT 2 cut(s) 781, 813
FaqI GGGAC 2 cut(s) 405, 2059
FauNDI CATATG 1 cut(s) 145
FbaI TGATCA 2 cut(s) 1015, 2434
FblI GTMKAC 3 cut(s) 1523, 1575, 1732
FokI GGATG 8 cut(s) 17, 545, 680, 1122, 1652, 1934, 2129, 2231
FspBI CTAG 7 cut(s) 240, 929, 1559, 1827, 1832, 2028, 2535
GsaI CCCAGC 1 cut(s) 2154
GsuI CTGGAG 3 cut(s) 570, 704, 900
HaeIII GGCC 8 cut(s) 439, 637, 1104, 1652, 2107, 2198, 2423, 2570
HapII CCGG 4 cut(s) 359, 445, 1058, 1300
HgaI GACGC 1 cut(s) 338
Hin1I GRCGYC 1 cut(s) 208
HindIII AAGCTT 1 cut(s) 2480
HpaII CCGG 4 cut(s) 359, 445, 1058, 1300
HphI GGTGA 5 cut(s) 71, 110, 824, 1610, 1859
Hpy166II GTNNAC 4 cut(s) 886, 1524, 1576, 1733
Hpy8I GTNNAC 4 cut(s) 886, 1524, 1576, 1733
HpyCH4III ACNGT 6 cut(s) 563, 1694, 1747, 1756, 1881, 2170
HpyCH4IV ACGT 5 cut(s) 70, 208, 471, 1122, 1840
HpyF10VI GCNNNNNNNGC 4 cut(s) 445, 461, 1961, 2018
HpySE526I ACGT 5 cut(s) 70, 208, 471, 1122, 1840
Hsp92I GRCGYC 1 cut(s) 208
Kpn2I TCCGGA 2 cut(s) 358, 1057
KpnI GGTACC 1 cut(s) 1289
KroI GCCGGC 1 cut(s) 444
KroNI GCCGGC 1 cut(s) 446
Ksp22I TGATCA 2 cut(s) 1015, 2434
Kzo9I GATC 4 cut(s) 1015, 1231, 2434, 2561
LguI GCTCTTC 2 cut(s) 1548, 1971
LmnI GCTCC 4 cut(s) 391, 874, 1604, 2401
Lsp1109I GCAGC 9 cut(s) 163, 448, 601, 604, 694, 806, 1523, 1964, 2596
LweI GCATC 9 cut(s) 52, 163, 554, 658, 769, 805, 953, 2137, 2263
MaeI CTAG 7 cut(s) 240, 929, 1559, 1827, 1832, 2028, 2535
MaeII ACGT 5 cut(s) 70, 208, 471, 1122, 1840
MaeIII GTNAC 5 cut(s) 326, 820, 1660, 1756, 2038
MalI GATC 4 cut(s) 1017, 1233, 2436, 2563
MboI GATC 4 cut(s) 1015, 1231, 2434, 2561
MboII GAAGA 7 cut(s) 182, 321, 758, 1565, 1958, 1993, 2011
MfeI CAATTG 2 cut(s) 1185, 1703
MhlI GDGCHC 3 cut(s) 1273, 1279, 2158
MlsI TGGCCA 1 cut(s) 2107
MluNI TGGCCA 1 cut(s) 2107
MlyI GAGTC 5 cut(s) 356, 421, 944, 2344, 2519
Mox20I TGGCCA 1 cut(s) 2107
Mph1103I ATGCAT 1 cut(s) 406
MroI TCCGGA 2 cut(s) 358, 1057
MroNI GCCGGC 1 cut(s) 444
MscI TGGCCA 1 cut(s) 2107
MslI CAYNNNNRTG 2 cut(s) 399, 810
Msp20I TGGCCA 1 cut(s) 2107
MspA1I CMGCKG 2 cut(s) 2597, 2635
MspCI CTTAAG 1 cut(s) 2258
MspI CCGG 4 cut(s) 359, 445, 1058, 1300
MspR9I CCNGG 7 cut(s) 417, 717, 1049, 1106, 1301, 2114, 2301
MunI CAATTG 2 cut(s) 1185, 1703
MvaI CCWGG 6 cut(s) 417, 717, 1049, 1106, 2114, 2301
MvnI CGCG 1 cut(s) 2580
MwoI GCNNNNNNNGC 4 cut(s) 445, 461, 1961, 2018
NaeI GCCGGC 1 cut(s) 446
NciI CCSGG 1 cut(s) 1301
NcoI CCATGG 2 cut(s) 528, 1497
NdeI CATATG 1 cut(s) 145
NdeII GATC 4 cut(s) 1015, 1231, 2434, 2561
NgoMIV GCCGGC 1 cut(s) 444
NlaIV GGNNCC 8 cut(s) 357, 421, 1287, 1348, 2157, 2199, 2403, 2551
NmuCI GTSAC 1 cut(s) 326
NsiI ATGCAT 1 cut(s) 406
NspI RCATGY 3 cut(s) 317, 1091, 1739
PagI TCATGA 1 cut(s) 115
PceI AGGCCT 2 cut(s) 439, 1652
PciI ACATGT 1 cut(s) 1735
PciSI GCTCTTC 2 cut(s) 1548, 1971
PcsI WCGNNNNNNNCGW 1 cut(s) 830
PdiI GCCGGC 1 cut(s) 446
PfeI GAWTC 7 cut(s) 133, 590, 1304, 1369, 1865, 2363, 2615
PflFI GACNNNGTC 1 cut(s) 2353
PflMI CCANNNNNTGG 1 cut(s) 878
PfoI TCCNGGA 1 cut(s) 1299
PleI GAGTC 5 cut(s) 355, 420, 943, 2344, 2518
PpsI GAGTC 5 cut(s) 355, 420, 943, 2344, 2518
Ppu21I YACGTR 1 cut(s) 1123
PscI ACATGT 1 cut(s) 1735
PsiI TTATAA 3 cut(s) 1161, 1947, 2471
Psp6I CCWGG 6 cut(s) 415, 715, 1047, 1104, 2112, 2299
PspFI CCCAGC 1 cut(s) 2150
PspGI CCWGG 6 cut(s) 415, 715, 1047, 1104, 2112, 2299
PspN4I GGNNCC 8 cut(s) 357, 421, 1287, 1348, 2157, 2199, 2403, 2551
PspPI GGNCC 4 cut(s) 356, 419, 2197, 2605
PstI CTGCAG 2 cut(s) 589, 622
PsyI GACNNNGTC 1 cut(s) 2353
RsaI GTAC 4 cut(s) 24, 1287, 2227, 2247
RsaNI GTAC 4 cut(s) 23, 1286, 2226, 2246
RseI CAYNNNNRTG 2 cut(s) 399, 810
SapI GCTCTTC 2 cut(s) 1548, 1971
Sau3AI GATC 4 cut(s) 1015, 1231, 2434, 2561
Sau96I GGNCC 4 cut(s) 356, 419, 2197, 2605
SchI GAGTC 5 cut(s) 356, 421, 944, 2344, 2519
ScrFI CCNGG 7 cut(s) 417, 717, 1049, 1106, 1301, 2114, 2301
SduI GDGCHC 3 cut(s) 1273, 1279, 2158
SfaNI GCATC 9 cut(s) 52, 163, 554, 658, 769, 805, 953, 2137, 2263
SfcI CTRYAG 6 cut(s) 585, 618, 1693, 1729, 1935, 2502
SinI GGWCC 3 cut(s) 356, 419, 2605
SmiMI CAYNNNNRTG 2 cut(s) 399, 810
SmlI CTYRAG 3 cut(s) 2258, 2327, 2386
SmoI CTYRAG 3 cut(s) 2258, 2327, 2386
SseBI AGGCCT 2 cut(s) 439, 1652
SsiI CCGC 5 cut(s) 978, 2252, 2578, 2595, 2635
SspMI CTAG 7 cut(s) 240, 929, 1559, 1827, 1832, 2028, 2535
StuI AGGCCT 2 cut(s) 439, 1652
StyD4I CCNGG 7 cut(s) 415, 715, 1047, 1104, 1299, 2112, 2299
StyI CCWWGG 2 cut(s) 528, 1497
TaaI ACNGT 6 cut(s) 563, 1694, 1747, 1756, 1881, 2170
TaiI ACGT 5 cut(s) 73, 211, 474, 1125, 1843
TaqI TCGA 5 cut(s) 224, 598, 646, 1455, 1969
TfiI GAWTC 7 cut(s) 133, 590, 1304, 1369, 1865, 2363, 2615
TscAI CASTG 3 cut(s) 274, 514, 1076
TseFI GTSAC 1 cut(s) 326
Tsp45I GTSAC 1 cut(s) 326
TspDTI ATGAA 8 cut(s) 69, 570, 759, 998, 1422, 1851, 2133, 2385
TspGWI ACGGA 2 cut(s) 273, 2343
TspRI CASTG 3 cut(s) 274, 514, 1076
Tth111I GACNNNGTC 1 cut(s) 2353
Van91I CCANNNNNTGG 1 cut(s) 878
Vha464I CTTAAG 1 cut(s) 2258
VpaK11BI GGWCC 3 cut(s) 356, 419, 2605
XceI RCATGY 3 cut(s) 317, 1091, 1739
XcmI CCANNNNNNNNNTGG 1 cut(s) 1147
XmiI GTMKAC 3 cut(s) 1523, 1575, 1732
XspI CTAG 7 cut(s) 240, 929, 1559, 1827, 1832, 2028, 2535
ZraI GACGTC 1 cut(s) 209
Zsp2I ATGCAT 1 cut(s) 406
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.