Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0011315

Physical Location & Seq

Genomic Coordinates Reverse (-)

40622772 .. 40630450

Gene Structure 7679 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00316010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2340 bp

ATGCAGGCTGCGAACCCTGGTTTCTTTTATGCCATACAACTTGATGAAGATAATCACATGGGTAATGTGTTTTGGTCGGATGCAAGGTCAAGAGCAGCTTACTCTCATTTTGGTGATGCTGTTACGCTTGATACGACATACAGAGTAAATCAATATAGAGTGCCATTTGCTCCATTTACCGGAGTGAACCATCATGGTCAGACAATTTTGTTTGGTTGTGCATTACTCCTAGATGAGTCAGAAGCGTCTTTTATTTGGTTATTCAAGACATTCCTTACCGCAATGAATGATTGCCCACCTGTATCTATTATGACTGATCAAGACAGAGCCATACAGACAGCAGTTTCTCAGGTGTTTCCGGAAGTTCGCCACTGCATTAGCAAGTGGCATGTTTTGAGAGAAGGCCAGGAAAGGTTGGCTCACGTATGCCATGCACATCCCAATTTTCAGGTGGAACTTTATAATTGTATCAATTTGACTGAAACGATCGAGGAGTTTGAATTGTCTTGGGGTTGTATCCTTGATAAGTATGATCTCAGGAGAAATGATTGGCTTCAATCGTTATATAGTGCCCGTGCTCAATGGGTACCTGTGTATTTCCGGGATTCCTTTTTTGCCACCATATCTCCCAATCAAGGGTATGATGGTTCCTTCTTTGAAGGCTATGTGAATCAGCAGACCACATTACCGATGTTCTTTAGGCAGTATGAAAGAGCATTGGAGAACTGGTTTGAAAGGGAAGTGGAAGCTGACTTCGATACAATCTGCACTACACCAGTATTGAGAACACCATCGCCCATGGAGAAACAGGCAGCCAATCTGTATACAAGAAAAATTTTTGCAAAATTTCAAGAAGAGCTAGTTGAAACTTTTGTGTACACAGCAAATAGAATTGAAGGTGATGGAGCTATTAGCACATTCAGAGTTGCAAAATTTGAGGATGACCGCAAGGCCTACATCGTTACATTAAACTATCCTGAGATGAGAGCCAACTGTAGTTGTCAATTGTTTGAGTATTCAGGTATTCTCTGTAGGCATGTTTTAACAGTCTTTACAGTTACAAATGTGCTTACACTACCTTCCCATTACATTTTGAAACGATGGACAAGAAATGCAAAGAATGGAACTGGCCTAGATGAACGTAGTGGTGAGTTGCATGACCAAGATTCTCTGACATTACGGTATAACAATCTGTGTCGGGAAGCCATTAGATATGCAGAGGATGGGGCTACTACTACAGAAACTTATAATGCAGCAATGACTGCTCTTCGAGATGGTGGGAAGAAGGTTTCTGTTGTGAAGAGAAATGTAGCTAAAGTTGCACCTCCTAGCTCTCAGGTTACTGGGACAGGCTATGAGGACAAGAAAAACTCTACATCAAATTCAGATATGACCCCTTTGTTGTGGCCACGCCAAGATGAAGTTATGAGGCGATTTAATCTTAATGATGCTGGTGCACCAGCTCAAACTGTTTCTGATTTGAATTTGCCACGAATGGCCCCGGTTTCCCTTCTACGGGATGATGGTACTTCTGAGAATATGGTGGTACTTCCGCATCTTAAGTCAATGACTTGGGTTATGGAGAACAAGAATTCAGCACCAGGAAATAGAGTAGCTGTCATTAACCTCAAGTTGCAAGATTATAGCAGGACTCCATCAGCAGAATCAGAGGTTAAGTTTCAGCTCTCAAGGGTTTCATTGGAGCCAATGTTGAGGTCTATGGCCTACATTAGTGATCAGCTCTCAACACCAGCTAATAAGGTCGCTGTTATAAATTTAAAGCTTCAAGACACAGAGACAACTACAGGGGAGTCAGAGGTTAAGTTTCAAGTGTCTAGGGATACATTAGGTGCTATGCTACGATCAATGGCCTATATCCGCGAGCAGCTTTCAACCGCTGTTTTTGATGCCTTGTATGGTTTTCAGAAAGCAGTATATACAATTATACATTATGCGAGGGCTGGTGGTTCCTTTGTGGATCAATGTTTTGTGGGTCATAAGGAAGATAATGTAGTTGGTGGAAATGTGGTTCATATATTTTCTGCTTATTGCTGCTTTGGATGGGGGAAATGTGGTTCTCTATTCCCCAAGACTATAACTTCTCCAAAAACTATAGCAGCTATAAATCTTCTCGTTCTCTTGAAACTGTTATGTTTCAAATTTCTACCTTTCTACCTTTTCAGGGCGAGGTCCATTCAGAGTCCCAACCTAAAAAGCAGCGGAAGTAAAGGCGTTTTGTGTGCTTACTCTCCCATATTGTACCCCAAGGTGCATCTCCACGCGGAAAGAAGACGGCATAGCAGGTTCAAGATGCTCGTAGTTCCACATTTAATTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005911 GO:0009506 GO:0030054 GO:0055044

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COMM_domain FAR1 MULE SWIM

Protein Analysis

779

Amino Acids

88.47

Weight (kDa)

7.54

Isoelectric Point (pI)

44.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ZSWIM1-3_RNaseH-like	PF21056	6 - 123	3.8e-11	Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE	PF10551	41 - 132	2.2e-27	MULE transposase domain
SWIM	PF04434	320 - 353	1.5e-08	SWIM zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011315)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27110 AT2G27110 AT2G27110
fragaria_vesca	FvH4_7g06621 FvH4_7g06621
malus_domestica	MD06G1010400.v1.1 MD16G1283900.v1.1
prunus_persica	Prupe.5G010000_v2.0.a1 Prupe.5G010000_v2.0.a1
pyrus_communis	pycom06g00850 pycom16g26020
rosa_chinensis	RchiOBHm_Chr1g0335301
rosa_multiflora	Rmu_sc0003404.1_g000006
rosa_roxburghii	Rroxscaffold_4G00316010
rosa_rugosa	Rorug01G0122300
rosa_samantha	Rh1AG143400 Rh1BG112400 Rh1CG135000 Rh1DG149000
rosa_wichuraiana	Rw0G009220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	462, 1248, 1772
Acc36I	ACCTGC	1 cut(s)	2292
Acc65I	GGTACC	1 cut(s)	586
AccB1I	GGYRCC	1 cut(s)	586
AccI	GTMKAC	1 cut(s)	824
AccII	CGCG	2 cut(s)	1881, 2282
AccIII	TCCGGA	1 cut(s)	358
AciI	CCGC	7 cut(s)	279, 946, 1553, 1879, 1896, 2220, 2282
AclWI	GGATC	1 cut(s)	1986
AcoI	YGGCCR	1 cut(s)	1406
AcsI	RAATTY	8 cut(s)	834, 845, 932, 1381, 1483, 1591, 1774, 2159
AfaI	GTAC	5 cut(s)	588, 878, 1528, 1548, 2261
AfiI	CCNNNNNNNGG	6 cut(s)	179, 635, 636, 1515, 1516, 2182
AflII	CTTAAG	1 cut(s)	1559
AjnI	CCWGG	3 cut(s)	16, 405, 1600
AloI	GAACNNNNNNTCC	4 cut(s)	2013, 2045, 2059, 2091
Alw21I	GWGCWC	2 cut(s)	580, 1459
Alw26I	GTCTC	1 cut(s)	1790
Alw44I	GTGCAC	1 cut(s)	1455
AlwI	GGATC	1 cut(s)	1986
Aor13HI	TCCGGA	1 cut(s)	358
AoxI	GGCC	7 cut(s)	403, 951, 1129, 1406, 1497, 1722, 1869
ApaLI	GTGCAC	1 cut(s)	1455
ApeKI	GCWGC	8 cut(s)	8, 95, 812, 1253, 1885, 2052, 2117, 2217
ApoI	RAATTY	8 cut(s)	834, 845, 932, 1381, 1483, 1591, 1774, 2159
Asp718I	GGTACC	1 cut(s)	586
AspS9I	GGNCC	2 cut(s)	1498, 2190
AsuC2I	CCSGG	2 cut(s)	602, 1502
AsuHPI	GGTGA	3 cut(s)	125, 911, 1160
AvaII	GGWCC	1 cut(s)	2190
BaeGI	GKGCMC	2 cut(s)	574, 1459
BaeI	ACNNNNGTAYC	2 cut(s)	578, 611
BalI	TGGCCA	1 cut(s)	1408
BanI	GGYRCC	1 cut(s)	586
BbsI	GAAGAC	1 cut(s)	2296
Bbv12I	GWGCWC	2 cut(s)	580, 1459
BbvI	GCAGC	7 cut(s)	107, 824, 1265, 1897, 2039, 2129, 2229
BceAI	ACGGC	1 cut(s)	2309
BciT130I	CCWGG	3 cut(s)	18, 407, 1602
BciVI	GTATCC	2 cut(s)	527, 1834
BclI	TGATCA	2 cut(s)	316, 1735
BcnI	CCSGG	2 cut(s)	602, 1502
BcoDI	GTCTC	1 cut(s)	1790
BfaI	CTAG	5 cut(s)	230, 860, 1133, 1329, 1836
BfmI	CTRYAG	5 cut(s)	994, 1030, 1236, 1803, 2112
BfrI	CTTAAG	1 cut(s)	1559
BfuAI	ACCTGC	1 cut(s)	2292
BfuI	GTATCC	2 cut(s)	527, 1834
BisI	GCNGC	8 cut(s)	9, 96, 813, 1254, 1886, 2053, 2118, 2218
BlsI	GCNGC	8 cut(s)	10, 97, 814, 1255, 1887, 2054, 2119, 2219
Bme1390I	CCNGG	5 cut(s)	18, 407, 602, 1502, 1602
Bme18I	GGWCC	1 cut(s)	2190
BmgT120I	GGNCC	2 cut(s)	1498, 2190
BmiI	GGNNCC	5 cut(s)	588, 649, 1500, 1704, 1969
BmrFI	CCNGG	5 cut(s)	18, 407, 602, 1502, 1602
BmrI	ACTGGG	1 cut(s)	1353
BmsI	GCATC	7 cut(s)	70, 106, 1438, 1564, 1897, 2281, 2301
BmuI	ACTGGG	1 cut(s)	1353
BpiI	GAAGAC	1 cut(s)	2296
BpuEI	CTTGAG	2 cut(s)	1613, 1672
BpuMI	CCSGG	2 cut(s)	602, 1502
BsaAI	YACGTR	1 cut(s)	424
BsaJI	CCNNGG	4 cut(s)	16, 798, 1500, 2265
BsaWI	WCCGGW	2 cut(s)	179, 358
BsaXI	ACNNNNNCTCC	6 cut(s)	610, 640, 713, 743, 1694, 1724
Bsc4I	CCNNNNNNNGG	6 cut(s)	179, 635, 636, 1515, 1516, 2182
Bse1I	ACTGG	4 cut(s)	731, 776, 1132, 1348
Bse3DI	GCAATG	2 cut(s)	288, 1263
BseAI	TCCGGA	1 cut(s)	358
BseBI	CCWGG	3 cut(s)	18, 407, 1602
BseDI	CCNNGG	4 cut(s)	16, 798, 1500, 2265
BseGI	GGATG	6 cut(s)	85, 436, 946, 1228, 1525, 2066
BseLI	CCNNNNNNNGG	6 cut(s)	179, 635, 636, 1515, 1516, 2182
BseMI	GCAATG	2 cut(s)	288, 1263
BseMII	CTCAG	5 cut(s)	362, 550, 969, 1349, 1524
BseNI	ACTGG	4 cut(s)	731, 776, 1132, 1348
BseRI	GAGGAG	1 cut(s)	506
BseSI	GKGCMC	2 cut(s)	574, 1459
BseXI	GCAGC	7 cut(s)	107, 824, 1265, 1897, 2039, 2129, 2229
BsgI	GTGCAG	1 cut(s)	751
Bsh1236I	CGCG	2 cut(s)	1881, 2282
Bsh1285I	CGRYCG	1 cut(s)	489
BshFI	GGCC	7 cut(s)	405, 953, 1131, 1408, 1499, 1724, 1871
BshNI	GGYRCC	1 cut(s)	586
BsiEI	CGRYCG	1 cut(s)	489
BsiHKAI	GWGCWC	2 cut(s)	580, 1459
BsiSI	CCGG	4 cut(s)	180, 359, 601, 1502
BslFI	GGGAC	2 cut(s)	1360, 2187
BslI	CCNNNNNNNGG	6 cut(s)	179, 635, 636, 1515, 1516, 2182
BsmAI	GTCTC	1 cut(s)	1790
BsmFI	GGGAC	2 cut(s)	1360, 2187
BsnI	GGCC	7 cut(s)	405, 953, 1131, 1408, 1499, 1724, 1871
Bsp1286I	GDGCHC	3 cut(s)	574, 580, 1459
Bsp13I	TCCGGA	1 cut(s)	358
Bsp1407I	TGTACA	1 cut(s)	876
Bsp143I	GATC	6 cut(s)	316, 486, 532, 1735, 1862, 1978
Bsp19I	CCATGG	1 cut(s)	798
BspACI	CCGC	7 cut(s)	279, 946, 1553, 1879, 1896, 2220, 2282
BspANI	GGCC	7 cut(s)	405, 953, 1131, 1408, 1499, 1724, 1871
BspCNI	CTCAG	5 cut(s)	361, 549, 970, 1348, 1525
BspEI	TCCGGA	1 cut(s)	358
BspFNI	CGCG	2 cut(s)	1881, 2282
BspLI	GGNNCC	5 cut(s)	588, 649, 1500, 1704, 1969
BspMI	ACCTGC	1 cut(s)	2292
BspPI	GGATC	1 cut(s)	1986
BspQI	GCTCTTC	2 cut(s)	849, 1272
BspT107I	GGYRCC	1 cut(s)	586
BspTI	CTTAAG	1 cut(s)	1559
BsrDI	GCAATG	2 cut(s)	288, 1263
BsrGI	TGTACA	1 cut(s)	876
BsrI	ACTGG	4 cut(s)	731, 776, 1132, 1348
BssECI	CCNNGG	4 cut(s)	16, 798, 1500, 2265
BssMI	GATC	6 cut(s)	316, 486, 532, 1735, 1862, 1978
BssNAI	GTATAC	1 cut(s)	825
BssT1I	CCWWGG	2 cut(s)	798, 2265
Bst1107I	GTATAC	1 cut(s)	825
Bst2UI	CCWGG	3 cut(s)	18, 407, 1602
Bst4CI	ACNGT	6 cut(s)	995, 1048, 1057, 1182, 1471, 2148
Bst6I	CTCTTC	3 cut(s)	849, 1272, 1295
BstAFI	CTTAAG	1 cut(s)	1559
BstAPI	GCANNNNNTGC	1 cut(s)	1262
BstAUI	TGTACA	1 cut(s)	876
BstBAI	YACGTR	1 cut(s)	424
BstC8I	GCNNGC	2 cut(s)	6, 1883
BstDEI	CTNAG	5 cut(s)	348, 536, 978, 1335, 1533
BstDSI	CCRYGG	1 cut(s)	798
BstF5I	GGATG	6 cut(s)	85, 436, 946, 1228, 1525, 2066
BstFNI	CGCG	2 cut(s)	1881, 2282
BstKTI	GATC	6 cut(s)	319, 489, 535, 1738, 1865, 1981
BstMAI	GTCTC	1 cut(s)	1790
BstMBI	GATC	6 cut(s)	316, 486, 532, 1735, 1862, 1978
BstMCI	CGRYCG	1 cut(s)	489
BstMWI	GCNNNNNNNGC	2 cut(s)	1262, 1319
BstNI	CCWGG	3 cut(s)	18, 407, 1602
BstNSI	RCATGY	2 cut(s)	392, 1040
BstSCI	CCNGG	5 cut(s)	16, 405, 600, 1500, 1600
BstSFI	CTRYAG	5 cut(s)	994, 1030, 1236, 1803, 2112
BstSLI	GKGCMC	2 cut(s)	574, 1459
BstUI	CGCG	2 cut(s)	1881, 2282
BstV1I	GCAGC	7 cut(s)	107, 824, 1265, 1897, 2039, 2129, 2229
BstV2I	GAAGAC	1 cut(s)	2296
BstZ17I	GTATAC	1 cut(s)	825
BsuI	GTATCC	2 cut(s)	527, 1834
BsuRI	GGCC	7 cut(s)	405, 953, 1131, 1408, 1499, 1724, 1871
BtgI	CCRYGG	1 cut(s)	798
BtgZI	GCGATG	1 cut(s)	777
BtsCI	GGATG	6 cut(s)	85, 436, 946, 1228, 1525, 2066
BtsI	GCAGTG	1 cut(s)	370
BtsIMutI	CAGTG	1 cut(s)	370
BveI	ACCTGC	1 cut(s)	2292
Cac8I	GCNNGC	2 cut(s)	6, 1883
Cfr13I	GGNCC	2 cut(s)	1498, 2190
CseI	GACGC	1 cut(s)	234
Csp6I	GTAC	5 cut(s)	587, 877, 1527, 1547, 2260
CviAII	CATG	7 cut(s)	58, 194, 389, 431, 799, 1037, 1157
CviQI	GTAC	5 cut(s)	587, 877, 1527, 1547, 2260
DdeI	CTNAG	5 cut(s)	348, 536, 978, 1335, 1533
DpnI	GATC	6 cut(s)	318, 488, 534, 1737, 1864, 1980
DpnII	GATC	6 cut(s)	316, 486, 532, 1735, 1862, 1978
DraI	TTTAAA	1 cut(s)	1779
EaeI	YGGCCR	1 cut(s)	1406
Eam1104I	CTCTTC	3 cut(s)	849, 1272, 1295
EarI	CTCTTC	3 cut(s)	849, 1272, 1295
Eco130I	CCWWGG	2 cut(s)	798, 2265
Eco147I	AGGCCT	1 cut(s)	953
Eco47I	GGWCC	1 cut(s)	2190
EcoRI	GAATTC	1 cut(s)	1591
EcoRII	CCWGG	3 cut(s)	16, 405, 1600
EcoT14I	CCWWGG	2 cut(s)	798, 2265
ErhI	CCWWGG	2 cut(s)	798, 2265
FaeI	CATG	7 cut(s)	61, 197, 392, 434, 802, 1040, 1160
FalI	AAGNNNNNCTT	2 cut(s)	82, 114
FaqI	GGGAC	2 cut(s)	1360, 2187
FatI	CATG	7 cut(s)	57, 193, 388, 430, 798, 1036, 1156
FbaI	TGATCA	2 cut(s)	316, 1735
FblI	GTMKAC	1 cut(s)	824
Fnu4HI	GCNGC	8 cut(s)	9, 96, 813, 1254, 1886, 2053, 2118, 2218
FokI	GGATG	6 cut(s)	92, 423, 953, 1235, 1532, 2073
Fsp4HI	GCNGC	8 cut(s)	9, 96, 813, 1254, 1886, 2053, 2118, 2218
FspBI	CTAG	5 cut(s)	230, 860, 1133, 1329, 1836
GluI	GCNGC	8 cut(s)	9, 96, 813, 1254, 1886, 2053, 2118, 2218
HaeIII	GGCC	7 cut(s)	405, 953, 1131, 1408, 1499, 1724, 1871
HapII	CCGG	4 cut(s)	180, 359, 601, 1502
HgaI	GACGC	1 cut(s)	234
Hin1II	CATG	7 cut(s)	61, 197, 392, 434, 802, 1040, 1160
HindIII	AAGCTT	1 cut(s)	1781
HinfI	GANTC	8 cut(s)	236, 605, 670, 1166, 1651, 1664, 1811, 2200
HpaII	CCGG	4 cut(s)	180, 359, 601, 1502
HphI	GGTGA	3 cut(s)	125, 911, 1160
Hpy166II	GTNNAC	5 cut(s)	187, 825, 877, 879, 1457
Hpy8I	GTNNAC	5 cut(s)	187, 825, 877, 879, 1457
HpyAV	CCTTC	7 cut(s)	395, 653, 661, 890, 1089, 1279, 1520
HpyCH4III	ACNGT	6 cut(s)	995, 1048, 1057, 1182, 1471, 2148
HpyCH4IV	ACGT	2 cut(s)	423, 1141
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1262, 1319
HpyF3I	CTNAG	5 cut(s)	348, 536, 978, 1335, 1533
HpySE526I	ACGT	2 cut(s)	423, 1141
Hsp92II	CATG	7 cut(s)	61, 197, 392, 434, 802, 1040, 1160
Kpn2I	TCCGGA	1 cut(s)	358
KpnI	GGTACC	1 cut(s)	590
Ksp22I	TGATCA	2 cut(s)	316, 1735
Kzo9I	GATC	6 cut(s)	316, 486, 532, 1735, 1862, 1978
LguI	GCTCTTC	2 cut(s)	849, 1272
LmnI	GCTCC	3 cut(s)	175, 905, 1702
Lsp1109I	GCAGC	7 cut(s)	107, 824, 1265, 1897, 2039, 2129, 2229
LweI	GCATC	7 cut(s)	70, 106, 1438, 1564, 1897, 2281, 2301
MaeI	CTAG	5 cut(s)	230, 860, 1133, 1329, 1836
MaeII	ACGT	2 cut(s)	423, 1141
MaeIII	GTNAC	4 cut(s)	121, 961, 1057, 1339
MalI	GATC	6 cut(s)	318, 488, 534, 1737, 1864, 1980
MboI	GATC	6 cut(s)	316, 486, 532, 1735, 1862, 1978
MboII	GAAGA	8 cut(s)	59, 866, 1259, 1294, 1312, 2015, 2120, 2301
MfeI	CAATTG	1 cut(s)	1004
MhlI	GDGCHC	3 cut(s)	574, 580, 1459
MlsI	TGGCCA	1 cut(s)	1408
MluNI	TGGCCA	1 cut(s)	1408
MlyI	GAGTC	4 cut(s)	245, 1645, 1820, 2209
MmeI	TCCRAC	1 cut(s)	57
Mox20I	TGGCCA	1 cut(s)	1408
MroI	TCCGGA	1 cut(s)	358
MscI	TGGCCA	1 cut(s)	1408
MslI	CAYNNNNRTG	1 cut(s)	111
Msp20I	TGGCCA	1 cut(s)	1408
MspA1I	CMGCKG	2 cut(s)	1898, 2220
MspCI	CTTAAG	1 cut(s)	1559
MspI	CCGG	4 cut(s)	180, 359, 601, 1502
MspR9I	CCNGG	5 cut(s)	18, 407, 602, 1502, 1602
MunI	CAATTG	1 cut(s)	1004
MvaI	CCWGG	3 cut(s)	18, 407, 1602
MvnI	CGCG	2 cut(s)	1881, 2282
MwoI	GCNNNNNNNGC	2 cut(s)	1262, 1319
NciI	CCSGG	2 cut(s)	602, 1502
NcoI	CCATGG	1 cut(s)	798
NdeII	GATC	6 cut(s)	316, 486, 532, 1735, 1862, 1978
NlaIII	CATG	7 cut(s)	61, 197, 392, 434, 802, 1040, 1160
NlaIV	GGNNCC	5 cut(s)	588, 649, 1500, 1704, 1969
NspI	RCATGY	2 cut(s)	392, 1040
PceI	AGGCCT	1 cut(s)	953
PciSI	GCTCTTC	2 cut(s)	849, 1272
PcsI	WCGNNNNNNNCGW	1 cut(s)	131
PfeI	GAWTC	4 cut(s)	605, 670, 1166, 1664
PfoI	TCCNGGA	1 cut(s)	600
PkrI	GCNGC	8 cut(s)	10, 97, 814, 1255, 1887, 2054, 2119, 2219
Ple19I	CGATCG	1 cut(s)	489
PleI	GAGTC	4 cut(s)	244, 1645, 1819, 2208
PpsI	GAGTC	4 cut(s)	244, 1645, 1819, 2208
Ppu21I	YACGTR	1 cut(s)	424
PsiI	TTATAA	3 cut(s)	462, 1248, 1772
Psp6I	CCWGG	3 cut(s)	16, 405, 1600
PspGI	CCWGG	3 cut(s)	16, 405, 1600
PspN4I	GGNNCC	5 cut(s)	588, 649, 1500, 1704, 1969
PspPI	GGNCC	2 cut(s)	1498, 2190
PvuI	CGATCG	1 cut(s)	489
RsaI	GTAC	5 cut(s)	588, 878, 1528, 1548, 2261
RsaNI	GTAC	5 cut(s)	587, 877, 1527, 1547, 2260
RseI	CAYNNNNRTG	1 cut(s)	111
SapI	GCTCTTC	2 cut(s)	849, 1272
SatI	GCNGC	8 cut(s)	9, 96, 813, 1254, 1886, 2053, 2118, 2218
Sau3AI	GATC	6 cut(s)	316, 486, 532, 1735, 1862, 1978
Sau96I	GGNCC	2 cut(s)	1498, 2190
SchI	GAGTC	4 cut(s)	245, 1645, 1820, 2209
ScrFI	CCNGG	5 cut(s)	18, 407, 602, 1502, 1602
SduI	GDGCHC	3 cut(s)	574, 580, 1459
SfaNI	GCATC	7 cut(s)	70, 106, 1438, 1564, 1897, 2281, 2301
SfcI	CTRYAG	5 cut(s)	994, 1030, 1236, 1803, 2112
SinI	GGWCC	1 cut(s)	2190
SmiMI	CAYNNNNRTG	1 cut(s)	111
SmlI	CTYRAG	3 cut(s)	1559, 1628, 1687
SmoI	CTYRAG	3 cut(s)	1559, 1628, 1687
SseBI	AGGCCT	1 cut(s)	953
SsiI	CCGC	7 cut(s)	279, 946, 1553, 1879, 1896, 2220, 2282
SspMI	CTAG	5 cut(s)	230, 860, 1133, 1329, 1836
StuI	AGGCCT	1 cut(s)	953
StyD4I	CCNGG	5 cut(s)	16, 405, 600, 1500, 1600
StyI	CCWWGG	2 cut(s)	798, 2265
TaaI	ACNGT	6 cut(s)	995, 1048, 1057, 1182, 1471, 2148
TaiI	ACGT	2 cut(s)	426, 1144
TaqI	TCGA	3 cut(s)	489, 756, 1270
TatI	WGTACW	1 cut(s)	876
TfiI	GAWTC	4 cut(s)	605, 670, 1166, 1664
TscAI	CASTG	1 cut(s)	377
TseI	GCWGC	8 cut(s)	8, 95, 812, 1253, 1885, 2052, 2117, 2217
TspDTI	ATGAA	7 cut(s)	60, 299, 723, 1152, 1434, 1686, 2021
TspRI	CASTG	1 cut(s)	377
Vha464I	CTTAAG	1 cut(s)	1559
VneI	GTGCAC	1 cut(s)	1455
VpaK11BI	GGWCC	1 cut(s)	2190
XapI	RAATTY	8 cut(s)	834, 845, 932, 1381, 1483, 1591, 1774, 2159
XceI	RCATGY	2 cut(s)	392, 1040
XcmI	CCANNNNNNNNNTGG	1 cut(s)	448
XmiI	GTMKAC	1 cut(s)	824
XspI	CTAG	5 cut(s)	230, 860, 1133, 1329, 1836

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.