FvH4_7g08110

transport protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0010756
Physical Location & Seq
Reverse (-)
8056347 .. 8067050
10704 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g08110.t1

Sequence Viewer

Length: 2286 bp
ATGAGTGAATTCATCGACCTAGAAACCCAGGACGGCGTCCGTATGCCGTGGAATGTGATCCCGGGAACGAAGCAGGAGTCCACCAACAGCGTCATCCCCGTCTCCGCCATCTACACTCCGATCAAGCCCTTCCCCACCATGCCTCTCCTCCCTTACTCCCCTCTCCGCTGCCGCACCTGCCGCGCCGTCCTCAACCCCTTCTCCACCGTCGATTACGCCGCCAAGATCTGGATCTGCCCCTTCTGCTTCACCCGCAACCACTTCCCTCCTCACTACGCTTCCATCACCGACGACAATCTCCCCGCCGAGCTCTTCCCTCAATACACCACCATCGAATACGACTCGTCGCTCGAGAAGCCGTCCACGCCGCCCGTCTTCATCTTCGTCGTCGACACGTGTATGATCGAGGAGGAGCTCTCGTATCTCAAGTCGGCGCTGTCTCAGGCCCTGGGGTTGTTGCCGGATCATTCCCTCGTAGGGCTGATCACCTTCGGGAGCTTCGTCCATGTCCATGAGTTAGGCTTCTCCACTATTCCCAAAACCTACGTGTTCAAAGGATCCAAGGAAGTCAACAAGGAGCAGCTGCTGGAGCAGATGAGCTTCTTTTTGAACAAGCCGAAGCCGACTACCGGAGTCATTGCCGGCCCTAGGGACGGGCTGTCCGCCCAGAGCATTGCCAGGTTTCTGTTGCCGGCGTCGGATTGCGAGTTCACACTCAATTCGGTGTTGGAGGAGTTGCAGAGGGATCCGTGGCAGGTTCCCGCGGATCAGAGGGCCACCAGGTGCACAAGTACGGCTCTTAGTGTTGCGGCGAGCTTGTTGGGAGCTTGCGTGCCGGGTTCGGGTGCCAGGATTATGGCATTTATAGGTGGACCGTCTACCGAAGGCCAGGGTGCTATTGTATCAAAAAGCCTATCTGAACCAATTCGTTCTCATAAGGACCTGGATAAAGATTCAGCCCCTCATTTTCATAAAGCTGTGAAGTTCTACGAGGGACTTTCAAAGCAGCTTGTACATCAAGGACATGTACTTGATCTTTTTGCTTGCGCGCTTGACCAGGTGGGGATTGCTGAACTTAAAATTGCAGTTGAAAGAACTGGAGGATTGGTTGTGCTTGCAGAGAGTTTTGGCCATTCAGTGTTTAAAGACTCACTTATACGTGTTTTCCAGTCGGGTGATCATGAGCTTGGTTTATCATCAAATGGCATATTTGAGATAAACTGCTCAAAAGACGTAAAAATTCAGGGCATAATTGGTCCTTGTGCATCCCTCGAAAAGAAAGGTCCTTTATGCTCTGACACAGTCATCGGCCAGGGTAGTACGAGTGCGTGGAAGATGTGTGGCCTTGACAAAACTACATCTTTATGTCTAATATTTGAAATTGTTAAGAAGGAAATCCCAGATGCTACTGTTCAACCAGCTAGCAATCAATTCTACTTCCAGTTTCTAACATATTATCAGCATAATAACGGTCAGATGAGACTTCGTGTTACAACCCTTTCAAGAAGATGGATTGCTGGAACTGGAAGCATACAGGACTTGATTGCCGGATTTGATCAAGAAGCCGCTGCTGTAGTCATGGCACGCCTAGTTTCTTTCAAAATGGAAACTGAGGCAGAATTTGATCCTATAAGATGGCTGGATAAATCATTGATACATATGTGTTCTCGGTTTGGAGATTACCAGAAGGACAGTCCGTCATCTTTTAGCTTATCTCCGCGGTTTTCAATCTTCCCTCAATTTATGTTTCATTTACGGCGTTCTCAATTTGTTCAGGTTTTCAACAACAGCCCAGACGAGACGGCATACTACAGAATGATTTTGAATAGGGAAAATGTTACCAATTCAGTTGTGATGATTCAGCCTTCATTGATTTCCTACTCATTTCATTCCAGCCCTGAGCCTGCACTTCTTGATGTTGCTGCCATTGCTGCTGATAGGATTCTGCTTTTAGACTCTTTCTTTACTGTTGTCATTTTTCATGGTTCAACTATTGCTCAGTGGCGAAAAGCAGGGTATCAAGACTTGCCTGAACATCAGGCATTCGCTCAGTTGTTACAAGCTCCTCGTGATGATTCAGATACAATAATCAAGGAGAGATTTCCAGTACCTCGCCTAGTGGTTTGTGATCAGCATGGTTCTCAGGCTCGTTTTCTTTTGGCAAAATTGAACCCTTCAGCTACTTATAACAATGAAGGTCCACTTCCGGGAGGGGATGTTATATTCACAGATGATGTTAGTTTTGAAGTCTTCTTGGACCATCTCCAGAGATTAGCAGTTCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
Gelsolin Sec23_BS Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

762

Amino Acids

84.46

Weight (kDa)

5.82

Isoelectric Point (pI)

44.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-Sec23_Sec24 PF04810 54 - 92 9.3e-18 Sec23/Sec24 zinc finger
Sec23_trunk PF04811 122 - 389 1.4e-65 Sec23/Sec24 trunk domain
Sec23_BS PF08033 400 - 504 3.5e-23 Sec23/Sec24 beta-sandwich domain
Sec23_helical PF04815 519 - 617 2.8e-26 Sec23/Sec24 helical domain
Gelsolin PF00626 632 - 719 3.2e-14 Gelsolin repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2187
AarI CACCTGC 1 cut(s) 185
Acc36I ACCTGC 2 cut(s) 185, 745
AccB1I GGYRCC 1 cut(s) 845
AccB7I CCANNNNNTGG 1 cut(s) 228
AccI GTMKAC 2 cut(s) 390, 878
AccII CGCG 4 cut(s) 183, 764, 1049, 1720
AclWI GGATC 9 cut(s) 52, 239, 471, 552, 565, 740, 753, 774, 1619
AcoI YGGCCR 2 cut(s) 1129, 1309
AcsI RAATTY 3 cut(s) 8, 1239, 1619
AcuI CTGAAG 1 cut(s) 2160
AcvI CACGTG 1 cut(s) 396
AcyI GRCGYC 2 cut(s) 36, 695
AdeI CACNNNGTG 1 cut(s) 783
AfaI GTAC 5 cut(s) 793, 1014, 1029, 1321, 2109
AfiI CCNNNNNNNGG 7 cut(s) 228, 477, 629, 648, 653, 842, 2207
AflIII ACRYGT 5 cut(s) 393, 395, 546, 1024, 1159
AhdI GACNNNNNGTC 2 cut(s) 658, 1696
AjnI CCWGG 9 cut(s) 27, 447, 677, 779, 848, 888, 942, 1056, 1311
AloI GAACNNNNNNTCC 2 cut(s) 692, 724
Alw21I GWGCWC 3 cut(s) 312, 417, 788
Alw26I GTCTC 4 cut(s) 106, 444, 1474, 1793
Alw44I GTGCAC 1 cut(s) 784
AlwI GGATC 9 cut(s) 52, 239, 471, 552, 565, 740, 753, 774, 1619
AlwNI CAGNNNCTG 2 cut(s) 448, 586
Ama87I CYCGRG 2 cut(s) 61, 350
AoxI GGCC 7 cut(s) 444, 643, 774, 886, 1129, 1309, 1342
ApaLI GTGCAC 1 cut(s) 784
ApeKI GCWGC 7 cut(s) 168, 580, 583, 1006, 1568, 1922, 1931
ApoI RAATTY 3 cut(s) 8, 1239, 1619
ArsI GACNNNNNNTTYG 2 cut(s) 62, 94
Asp700I GAANNNNTTC 1 cut(s) 924
AspA2I CCTAGG 1 cut(s) 647
AspLEI GCGC 4 cut(s) 185, 436, 1049, 1051
AspS9I GGNCC 9 cut(s) 445, 644, 774, 872, 940, 1256, 1283, 2198, 2257
AsuC2I CCSGG 4 cut(s) 62, 63, 837, 2208
AsuHPI GGTGA 4 cut(s) 241, 277, 478, 1187
AsuNHI GCTAGC 1 cut(s) 1421
AvaI CYCGRG 2 cut(s) 61, 350
AvaII GGWCC 6 cut(s) 872, 940, 1256, 1283, 2198, 2257
AvrII CCTAGG 1 cut(s) 647
BaeGI GKGCMC 1 cut(s) 788
BaeI ACNNNNGTAYC 2 cut(s) 1646, 1679
BalI TGGCCA 1 cut(s) 1131
BamHI GGATCC 2 cut(s) 557, 745
BanI GGYRCC 1 cut(s) 845
BanII GRGCYC 2 cut(s) 312, 417
BauI CACGAG 1 cut(s) 2067
BbrPI CACGTG 1 cut(s) 396
BbsI GAAGAC 2 cut(s) 367, 2242
Bbv12I GWGCWC 3 cut(s) 312, 417, 788
BbvI GCAGC 7 cut(s) 155, 570, 592, 1018, 1555, 1909, 1918
BccI CCATC 6 cut(s) 116, 290, 338, 1503, 1629, 2268
BceAI ACGGC 7 cut(s) 31, 49, 170, 343, 810, 1772, 1818
BciT130I CCWGG 9 cut(s) 29, 449, 679, 781, 850, 890, 944, 1058, 1313
BclI TGATCA 4 cut(s) 483, 1177, 1555, 2128
BcnI CCSGG 4 cut(s) 62, 63, 837, 2208
BcoDI GTCTC 4 cut(s) 106, 444, 1474, 1793
BfaI CTAG 5 cut(s) 20, 648, 1422, 1589, 2117
BfmI CTRYAG 2 cut(s) 1572, 1810
BfoI RGCGCY 1 cut(s) 437
BfuAI ACCTGC 2 cut(s) 185, 745
BglII AGATCT 1 cut(s) 225
BlnI CCTAGG 1 cut(s) 647
Bme18I GGWCC 6 cut(s) 872, 940, 1256, 1283, 2198, 2257
BmeRI GACNNNNNGTC 2 cut(s) 658, 1696
BmeT110I CYCGRG 2 cut(s) 61, 350
BmgT120I GGNCC 9 cut(s) 445, 644, 774, 872, 940, 1256, 1283, 2198, 2257
BmiI GGNNCC 4 cut(s) 559, 747, 759, 847
BmsI GCATC 2 cut(s) 1274, 1393
BmtI GCTAGC 1 cut(s) 1425
BpiI GAAGAC 2 cut(s) 367, 2242
BplI GAGNNNNNCTC 2 cut(s) 401, 433
BpmI CTGGAG 3 cut(s) 608, 1119, 2249
Bpu10I CCTNAGC 1 cut(s) 1899
BpuEI CTTGAG 1 cut(s) 410
BpuMI CCSGG 4 cut(s) 62, 63, 837, 2208
BsaAI YACGTR 3 cut(s) 396, 547, 1160
BsaBI GATNNNNATC 1 cut(s) 230
BsaHI GRCGYC 2 cut(s) 36, 695
BsaWI WCCGGW 1 cut(s) 629
Bsc4I CCNNNNNNNGG 7 cut(s) 228, 477, 629, 648, 653, 842, 2207
Bse118I RCCGGY 2 cut(s) 641, 691
Bse1I ACTGG 5 cut(s) 1102, 1168, 1441, 1528, 2105
Bse3DI GCAATG 3 cut(s) 636, 672, 1926
Bse8I GATNNNNATC 1 cut(s) 230
BseBI CCWGG 9 cut(s) 29, 449, 679, 781, 850, 890, 944, 1058, 1313
BseGI GGATG 3 cut(s) 93, 1265, 2221
BseJI GATNNNNATC 1 cut(s) 230
BseLI CCNNNNNNNGG 7 cut(s) 228, 477, 629, 648, 653, 842, 2207
BseMI GCAATG 3 cut(s) 636, 672, 1926
BseMII CTCAG 6 cut(s) 455, 1602, 1890, 2012, 2063, 2156
BseNI ACTGG 5 cut(s) 1102, 1168, 1441, 1528, 2105
BsePI GCGCGC 1 cut(s) 1047
BseRI GAGGAG 6 cut(s) 137, 258, 422, 425, 746, 2055
BseSI GKGCMC 1 cut(s) 788
BseXI GCAGC 7 cut(s) 155, 570, 592, 1018, 1555, 1909, 1918
BsgI GTGCAG 1 cut(s) 1890
Bsh1236I CGCG 4 cut(s) 183, 764, 1049, 1720
BshFI GGCC 7 cut(s) 446, 645, 776, 888, 1131, 1311, 1344
BshNI GGYRCC 1 cut(s) 845
BsiHKAI GWGCWC 3 cut(s) 312, 417, 788
BsiHKCI CYCGRG 2 cut(s) 61, 350
BsiSI CCGG 8 cut(s) 62, 461, 630, 642, 692, 836, 1548, 2207
BslFI GGGAC 2 cut(s) 665, 1008
BslI CCNNNNNNNGG 7 cut(s) 228, 477, 629, 648, 653, 842, 2207
BsmAI GTCTC 4 cut(s) 106, 444, 1474, 1793
BsmBI CGTCTC 2 cut(s) 106, 1793
BsmFI GGGAC 2 cut(s) 665, 1008
BsmI GAATGC 1 cut(s) 2042
BsnI GGCC 7 cut(s) 446, 645, 776, 888, 1131, 1311, 1344
BsoBI CYCGRG 2 cut(s) 61, 350
Bsp1286I GDGCHC 3 cut(s) 312, 417, 788
Bsp1407I TGTACA 1 cut(s) 1012
BspANI GGCC 7 cut(s) 446, 645, 776, 888, 1131, 1311, 1344
BspCNI CTCAG 6 cut(s) 454, 1603, 1891, 2011, 2062, 2155
BspFNI CGCG 4 cut(s) 183, 764, 1049, 1720
BspHI TCATGA 1 cut(s) 1180
BspLI GGNNCC 4 cut(s) 559, 747, 759, 847
BspMI ACCTGC 2 cut(s) 185, 745
BspOI GCTAGC 1 cut(s) 1425
BspPI GGATC 9 cut(s) 52, 239, 471, 552, 565, 740, 753, 774, 1619
BspQI GCTCTTC 1 cut(s) 317
BspT107I GGYRCC 1 cut(s) 845
BsrDI GCAATG 3 cut(s) 636, 672, 1926
BsrFI RCCGGY 2 cut(s) 641, 691
BsrGI TGTACA 1 cut(s) 1012
BsrI ACTGG 5 cut(s) 1102, 1168, 1441, 1528, 2105
BssAI RCCGGY 2 cut(s) 641, 691
BssHII GCGCGC 1 cut(s) 1047
BssNI GRCGYC 2 cut(s) 36, 695
BssSI CACGAG 1 cut(s) 2067
BssT1I CCWWGG 2 cut(s) 561, 647
Bst2BI CACGAG 1 cut(s) 2067
Bst2UI CCWGG 9 cut(s) 29, 449, 679, 781, 850, 890, 944, 1058, 1313
Bst4CI ACNGT 7 cut(s) 208, 876, 1303, 1411, 1472, 1694, 1969
Bst6I CTCTTC 1 cut(s) 317
BstACI GRCGYC 2 cut(s) 36, 695
BstAUI TGTACA 1 cut(s) 1012
BstBAI YACGTR 3 cut(s) 396, 547, 1160
BstDEI CTNAG 7 cut(s) 441, 800, 1611, 1899, 1998, 2049, 2142
BstDSI CCRYGG 4 cut(s) 47, 749, 762, 1718
BstF5I GGATG 3 cut(s) 93, 1265, 2221
BstFNI CGCG 4 cut(s) 183, 764, 1049, 1720
BstH2I RGCGCY 1 cut(s) 437
BstHHI GCGC 4 cut(s) 185, 436, 1049, 1051
BstMAI GTCTC 4 cut(s) 106, 444, 1474, 1793
BstMWI GCNNNNNNNGC 9 cut(s) 177, 180, 243, 252, 355, 364, 589, 1928, 1931
BstNI CCWGG 9 cut(s) 29, 449, 679, 781, 850, 890, 944, 1058, 1313
BstNSI RCATGY 1 cut(s) 1028
BstSFI CTRYAG 2 cut(s) 1572, 1810
BstSLI GKGCMC 1 cut(s) 788
BstUI CGCG 4 cut(s) 183, 764, 1049, 1720
BstV1I GCAGC 7 cut(s) 155, 570, 592, 1018, 1555, 1909, 1918
BstV2I GAAGAC 2 cut(s) 367, 2242
BstX2I RGATCY 4 cut(s) 225, 231, 557, 745
BstXI CCANNNNNNTGG 1 cut(s) 856
BstYI RGATCY 4 cut(s) 225, 231, 557, 745
BsuRI GGCC 7 cut(s) 446, 645, 776, 888, 1131, 1311, 1344
BtgI CCRYGG 4 cut(s) 47, 749, 762, 1718
BtsCI GGATG 3 cut(s) 93, 1265, 2221
BtsIMutI CAGTG 2 cut(s) 1143, 2006
BveI ACCTGC 2 cut(s) 185, 745
CaiI CAGNNNCTG 2 cut(s) 448, 586
CciI TCATGA 1 cut(s) 1180
CfoI GCGC 4 cut(s) 185, 436, 1049, 1051
Cfr10I RCCGGY 2 cut(s) 641, 691
Cfr13I GGNCC 9 cut(s) 445, 644, 774, 872, 940, 1256, 1283, 2198, 2257
Cfr42I CCGCGG 2 cut(s) 765, 1721
Cfr9I CCCGGG 1 cut(s) 61
CseI GACGC 3 cut(s) 25, 79, 684
CsiI ACCWGGT 2 cut(s) 779, 1056
Csp6I GTAC 5 cut(s) 792, 1013, 1028, 1320, 2108
CviAII CATG 8 cut(s) 139, 506, 512, 1025, 1181, 1579, 1982, 2135
CviQI GTAC 5 cut(s) 792, 1013, 1028, 1320, 2108
DdeI CTNAG 7 cut(s) 441, 800, 1611, 1899, 1998, 2049, 2142
DraI TTTAAA 1 cut(s) 1144
DraIII CACNNNGTG 1 cut(s) 783
DriI GACNNNNNGTC 2 cut(s) 658, 1696
EaeI YGGCCR 2 cut(s) 1129, 1309
Eam1104I CTCTTC 1 cut(s) 317
Eam1105I GACNNNNNGTC 2 cut(s) 658, 1696
EarI CTCTTC 1 cut(s) 317
EciI GGCGGA 2 cut(s) 94, 652
Ecl136II GAGCTC 2 cut(s) 310, 415
Eco130I CCWWGG 2 cut(s) 561, 647
Eco24I GRGCYC 2 cut(s) 312, 417
Eco47I GGWCC 6 cut(s) 872, 940, 1256, 1283, 2198, 2257
Eco53kI GAGCTC 2 cut(s) 310, 415
Eco57I CTGAAG 1 cut(s) 2160
Eco72I CACGTG 1 cut(s) 396
Eco88I CYCGRG 2 cut(s) 61, 350
EcoICRI GAGCTC 2 cut(s) 310, 415
EcoO109I RGGNCCY 3 cut(s) 445, 940, 1283
EcoRI GAATTC 1 cut(s) 8
EcoRII CCWGG 9 cut(s) 27, 447, 677, 779, 848, 888, 942, 1056, 1311
EcoT14I CCWWGG 2 cut(s) 561, 647
EcoT38I GRGCYC 2 cut(s) 312, 417
ErhI CCWWGG 2 cut(s) 561, 647
Esp3I CGTCTC 2 cut(s) 106, 1793
FaeI CATG 8 cut(s) 142, 509, 515, 1028, 1184, 1582, 1985, 2138
FalI AAGNNNNNCTT 4 cut(s) 1137, 1169, 2187, 2219
FaqI GGGAC 2 cut(s) 665, 1008
FatI CATG 8 cut(s) 138, 505, 511, 1024, 1180, 1578, 1981, 2134
FauI CCCGC 3 cut(s) 260, 310, 769
FauNDI CATATG 1 cut(s) 1659
FbaI TGATCA 4 cut(s) 483, 1177, 1555, 2128
FblI GTMKAC 2 cut(s) 390, 878
FokI GGATG 3 cut(s) 80, 1252, 2228
FriOI GRGCYC 2 cut(s) 312, 417
FspBI CTAG 5 cut(s) 20, 648, 1422, 1589, 2117
GlaI GCGC 4 cut(s) 184, 435, 1048, 1050
GsuI CTGGAG 3 cut(s) 608, 1119, 2249
HaeII RGCGCY 1 cut(s) 437
HaeIII GGCC 7 cut(s) 446, 645, 776, 888, 1131, 1311, 1344
HapII CCGG 8 cut(s) 62, 461, 630, 642, 692, 836, 1548, 2207
HgaI GACGC 3 cut(s) 25, 79, 684
HhaI GCGC 4 cut(s) 185, 436, 1049, 1051
Hin1I GRCGYC 2 cut(s) 36, 695
Hin1II CATG 8 cut(s) 142, 509, 515, 1028, 1184, 1582, 1985, 2138
Hin6I GCGC 4 cut(s) 183, 434, 1047, 1049
HinP1I GCGC 4 cut(s) 183, 434, 1047, 1049
HincII GTYRAC 2 cut(s) 391, 571
HindII GTYRAC 2 cut(s) 391, 571
HinfI GANTC 9 cut(s) 77, 341, 633, 953, 1148, 1858, 1942, 1955, 2075
HpaII CCGG 8 cut(s) 62, 461, 630, 642, 692, 836, 1548, 2207
HphI GGTGA 4 cut(s) 241, 277, 478, 1187
Hpy166II GTNNAC 9 cut(s) 81, 363, 391, 571, 711, 786, 872, 879, 2201
Hpy188I TCNGA 7 cut(s) 120, 700, 771, 919, 1297, 1476, 2080
Hpy8I GTNNAC 9 cut(s) 81, 363, 391, 571, 711, 786, 872, 879, 2201
Hpy99I CGWCG 6 cut(s) 212, 293, 349, 389, 392, 700
HpyCH4III ACNGT 7 cut(s) 208, 876, 1303, 1411, 1472, 1694, 1969
HpyCH4IV ACGT 4 cut(s) 395, 546, 1159, 1233
HpyCH4V TGCA 6 cut(s) 739, 786, 1085, 1118, 1265, 1907
HpyF10VI GCNNNNNNNGC 9 cut(s) 177, 180, 243, 252, 355, 364, 589, 1928, 1931
HpyF3I CTNAG 7 cut(s) 441, 800, 1611, 1899, 1998, 2049, 2142
HpySE526I ACGT 4 cut(s) 395, 546, 1159, 1233
Hsp92I GRCGYC 2 cut(s) 36, 695
Hsp92II CATG 8 cut(s) 142, 509, 515, 1028, 1184, 1582, 1985, 2138
HspAI GCGC 4 cut(s) 183, 434, 1047, 1049
KroI GCCGGC 2 cut(s) 641, 691
KroNI GCCGGC 2 cut(s) 643, 693
Ksp22I TGATCA 4 cut(s) 483, 1177, 1555, 2128
KspI CCGCGG 2 cut(s) 765, 1721
LguI GCTCTTC 1 cut(s) 317
LmnI GCTCC 6 cut(s) 412, 495, 577, 589, 824, 2068
Lsp1109I GCAGC 7 cut(s) 155, 570, 592, 1018, 1555, 1909, 1918
LweI GCATC 2 cut(s) 1274, 1393
MabI ACCWGGT 2 cut(s) 779, 1056
MaeI CTAG 5 cut(s) 20, 648, 1422, 1589, 2117
MaeII ACGT 4 cut(s) 395, 546, 1159, 1233
MaeIII GTNAC 3 cut(s) 1489, 1837, 2055
MboII GAAGA 7 cut(s) 304, 367, 373, 1345, 1518, 1723, 2242
MflI RGATCY 4 cut(s) 225, 231, 557, 745
MhlI GDGCHC 3 cut(s) 312, 417, 788
MlsI TGGCCA 1 cut(s) 1131
MluNI TGGCCA 1 cut(s) 1131
MlyI GAGTC 5 cut(s) 86, 335, 642, 1142, 1949
MmeI TCCRAC 2 cut(s) 678, 708
Mox20I TGGCCA 1 cut(s) 1131
MroNI GCCGGC 2 cut(s) 641, 691
MroXI GAANNNNTTC 1 cut(s) 924
MscI TGGCCA 1 cut(s) 1131
MseI TTAA 3 cut(s) 1077, 1143, 1386
MslI CAYNNNNRTG 3 cut(s) 398, 510, 1363
Msp20I TGGCCA 1 cut(s) 1131
MspA1I CMGCKG 5 cut(s) 168, 583, 764, 1568, 1720
MspI CCGG 8 cut(s) 62, 461, 630, 642, 692, 836, 1548, 2207
Mva1269I GAATGC 1 cut(s) 2042
MvaI CCWGG 9 cut(s) 29, 449, 679, 781, 850, 890, 944, 1058, 1313
MvnI CGCG 4 cut(s) 183, 764, 1049, 1720
MwoI GCNNNNNNNGC 9 cut(s) 177, 180, 243, 252, 355, 364, 589, 1928, 1931
NaeI GCCGGC 2 cut(s) 643, 693
NciI CCSGG 4 cut(s) 62, 63, 837, 2208
NdeI CATATG 1 cut(s) 1659
NgoMIV GCCGGC 2 cut(s) 641, 691
NheI GCTAGC 1 cut(s) 1421
NlaIII CATG 8 cut(s) 142, 509, 515, 1028, 1184, 1582, 1985, 2138
NlaIV GGNNCC 4 cut(s) 559, 747, 759, 847
NmeAIII GCCGAG 1 cut(s) 331
NspI RCATGY 1 cut(s) 1028
PaeR7I CTCGAG 1 cut(s) 350
PagI TCATGA 1 cut(s) 1180
PaqCI CACCTGC 1 cut(s) 185
PasI CCCWGGG 1 cut(s) 448
PauI GCGCGC 1 cut(s) 1047
PciI ACATGT 1 cut(s) 1024
PciSI GCTCTTC 1 cut(s) 317
PcsI WCGNNNNNNNCGW 1 cut(s) 498
PctI GAATGC 1 cut(s) 2042
PdiI GCCGGC 2 cut(s) 643, 693
PdmI GAANNNNTTC 1 cut(s) 924
PfeI GAWTC 4 cut(s) 953, 1858, 1942, 2075
PflFI GACNNNGTC 2 cut(s) 35, 1301
PflMI CCANNNNNTGG 1 cut(s) 228
PfoI TCCNGGA 1 cut(s) 2206
PleI GAGTC 5 cut(s) 85, 335, 641, 1142, 1949
PmaCI CACGTG 1 cut(s) 396
PmlI CACGTG 1 cut(s) 396
PpsI GAGTC 5 cut(s) 85, 335, 641, 1142, 1949
Ppu21I YACGTR 3 cut(s) 396, 547, 1160
PpuMI RGGWCCY 2 cut(s) 940, 1283
PscI ACATGT 1 cut(s) 1024
PsiI TTATAA 1 cut(s) 2187
Psp124BI GAGCTC 2 cut(s) 312, 417
Psp5II RGGWCCY 2 cut(s) 940, 1283
Psp6I CCWGG 9 cut(s) 27, 447, 677, 779, 848, 888, 942, 1056, 1311
PspCI CACGTG 1 cut(s) 396
PspGI CCWGG 9 cut(s) 27, 447, 677, 779, 848, 888, 942, 1056, 1311
PspN4I GGNNCC 4 cut(s) 559, 747, 759, 847
PspPI GGNCC 9 cut(s) 445, 644, 774, 872, 940, 1256, 1283, 2198, 2257
PspPPI RGGWCCY 2 cut(s) 940, 1283
PstNI CAGNNNCTG 2 cut(s) 448, 586
PsuI RGATCY 4 cut(s) 225, 231, 557, 745
PsyI GACNNNGTC 2 cut(s) 35, 1301
PteI GCGCGC 1 cut(s) 1047
PvuII CAGCTG 1 cut(s) 583
RsaI GTAC 5 cut(s) 793, 1014, 1029, 1321, 2109
RsaNI GTAC 5 cut(s) 792, 1013, 1028, 1320, 2108
RseI CAYNNNNRTG 3 cut(s) 398, 510, 1363
SacI GAGCTC 2 cut(s) 312, 417
SacII CCGCGG 2 cut(s) 765, 1721
SalI GTCGAC 1 cut(s) 389
SapI GCTCTTC 1 cut(s) 317
SaqAI TTAA 3 cut(s) 1077, 1143, 1386
Sau96I GGNCC 9 cut(s) 445, 644, 774, 872, 940, 1256, 1283, 2198, 2257
SchI GAGTC 5 cut(s) 86, 335, 642, 1142, 1949
SduI GDGCHC 3 cut(s) 312, 417, 788
SexAI ACCWGGT 2 cut(s) 779, 1056
SfaNI GCATC 2 cut(s) 1274, 1393
SfcI CTRYAG 2 cut(s) 1572, 1810
Sfr274I CTCGAG 1 cut(s) 350
Sfr303I CCGCGG 2 cut(s) 765, 1721
SgrBI CCGCGG 2 cut(s) 765, 1721
SinI GGWCC 6 cut(s) 872, 940, 1256, 1283, 2198, 2257
SlaI CTCGAG 1 cut(s) 350
SmaI CCCGGG 1 cut(s) 63
SmiMI CAYNNNNRTG 3 cut(s) 398, 510, 1363
SmlI CTYRAG 2 cut(s) 350, 425
SmoI CTYRAG 2 cut(s) 350, 425
SspI AATATT 1 cut(s) 1374
SspMI CTAG 5 cut(s) 20, 648, 1422, 1589, 2117
SstI GAGCTC 2 cut(s) 312, 417
StyI CCWWGG 2 cut(s) 561, 647
TaaI ACNGT 7 cut(s) 208, 876, 1303, 1411, 1472, 1694, 1969
TaiI ACGT 4 cut(s) 398, 549, 1162, 1236
TaqI TCGA 7 cut(s) 15, 210, 333, 351, 390, 405, 1272
TatI WGTACW 2 cut(s) 1012, 1027
TauI GCSGC 6 cut(s) 174, 183, 221, 370, 812, 1568
TfiI GAWTC 4 cut(s) 953, 1858, 1942, 2075
Tru1I TTAA 3 cut(s) 1077, 1143, 1386
Tru9I TTAA 3 cut(s) 1077, 1143, 1386
TscAI CASTG 2 cut(s) 1143, 2006
TseI GCWGC 7 cut(s) 168, 580, 583, 1006, 1568, 1922, 1931
TspDTI ATGAA 7 cut(s) 367, 959, 1739, 1857, 1877, 1970, 2208
TspGWI ACGGA 3 cut(s) 29, 738, 1686
TspMI CCCGGG 1 cut(s) 61
TspRI CASTG 2 cut(s) 1143, 2006
Tth111I GACNNNGTC 2 cut(s) 35, 1301
Van91I CCANNNNNTGG 1 cut(s) 228
VneI GTGCAC 1 cut(s) 784
VpaK11BI GGWCC 6 cut(s) 872, 940, 1256, 1283, 2198, 2257
XapI RAATTY 3 cut(s) 8, 1239, 1619
XceI RCATGY 1 cut(s) 1028
XhoI CTCGAG 1 cut(s) 350
XmaI CCCGGG 1 cut(s) 61
XmaJI CCTAGG 1 cut(s) 647
XmiI GTMKAC 2 cut(s) 390, 878
XmnI GAANNNNTTC 1 cut(s) 924
XspI CTAG 5 cut(s) 20, 648, 1422, 1589, 2117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.