transport protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G21630 |
| fragaria_vesca | FvH4_7g08110 FvH4_7g08110 FvH4_7g08110 |
| malus_domestica | MD02G1230100.v1.1 MD07G1082300.v1.1 |
| prunus_persica | Prupe.2G107900_v2.0.a1 |
| pyrus_communis | pycom02g19950 pycom07g06560 |
| rosa_chinensis | RchiOBHm_Chr1g0341181 |
| rosa_laevigata | RLG00000029068 |
| rosa_multiflora | Rmu_sc0004092.1_g000025 Rmu_sc0010892.1_g000009 Rmu_sc0019537.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00311780 |
| rosa_rugosa | Rorug01G0159700.1 |
| rosa_samantha | Rh1AG174000 Rh1BG141900 Rh1CG161800 |
| rosa_wichuraiana | Rw1G014450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 404 |
| Acc16I | TGCGCA | 1 cut(s) | 1048 |
| Acc36I | ACCTGC | 2 cut(s) | 404, 745 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 228, 448, 517 |
| AccBSI | CCGCTC | 1 cut(s) | 183 |
| AccI | GTMKAC | 2 cut(s) | 111, 390 |
| AccII | CGCG | 2 cut(s) | 174, 797 |
| AclWI | GGATC | 6 cut(s) | 239, 552, 565, 585, 740, 774 |
| AcoI | YGGCCR | 2 cut(s) | 624, 1309 |
| AcsI | RAATTY | 2 cut(s) | 8, 707 |
| AdeI | CACNNNGTG | 1 cut(s) | 783 |
| AfaI | GTAC | 3 cut(s) | 1014, 1029, 1321 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 228, 448, 477, 517, 629, 648, 653, 654, 842 |
| AflIII | ACRYGT | 3 cut(s) | 546, 1024, 1159 |
| AgsI | TTSAA | 8 cut(s) | 250, 553, 1002, 1091, 1274, 1379, 1415, 1503 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 658 |
| AjiI | CACGTC | 1 cut(s) | 508 |
| AjnI | CCWGG | 9 cut(s) | 27, 441, 647, 779, 835, 888, 942, 1056, 1311 |
| Alw21I | GWGCWC | 3 cut(s) | 312, 417, 788 |
| Alw26I | GTCTC | 3 cut(s) | 106, 1297, 1474 |
| Alw44I | GTGCAC | 1 cut(s) | 784 |
| AlwI | GGATC | 6 cut(s) | 239, 552, 565, 585, 740, 774 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 448 |
| Ama87I | CYCGRG | 2 cut(s) | 61, 350 |
| AoxI | GGCC | 5 cut(s) | 624, 643, 886, 1309, 1342 |
| ApaLI | GTGCAC | 1 cut(s) | 784 |
| ApeKI | GCWGC | 3 cut(s) | 168, 583, 1006 |
| ApoI | RAATTY | 2 cut(s) | 8, 707 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 62, 94 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 924 |
| AspLEI | GCGC | 4 cut(s) | 448, 715, 799, 1049 |
| AspS9I | GGNCC | 6 cut(s) | 16, 644, 872, 940, 1256, 1283 |
| AsuC2I | CCSGG | 2 cut(s) | 62, 63 |
| AsuHPI | GGTGA | 2 cut(s) | 478, 1187 |
| AsuNHI | GCTAGC | 1 cut(s) | 1421 |
| AvaI | CYCGRG | 2 cut(s) | 61, 350 |
| AvaII | GGWCC | 5 cut(s) | 16, 872, 940, 1256, 1283 |
| BaeGI | GKGCMC | 2 cut(s) | 68, 788 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1290, 1323 |
| BalI | TGGCCA | 1 cut(s) | 1311 |
| BamHI | GGATCC | 1 cut(s) | 557 |
| BanII | GRGCYC | 3 cut(s) | 312, 417, 483 |
| BbsI | GAAGAC | 1 cut(s) | 367 |
| Bbv12I | GWGCWC | 3 cut(s) | 312, 417, 788 |
| BbvI | GCAGC | 3 cut(s) | 155, 570, 1018 |
| BccI | CCATC | 3 cut(s) | 338, 883, 1503 |
| BceAI | ACGGC | 4 cut(s) | 31, 49, 92, 962 |
| BciT130I | CCWGG | 9 cut(s) | 29, 443, 649, 781, 837, 890, 944, 1058, 1313 |
| BclI | TGATCA | 1 cut(s) | 1177 |
| BcnI | CCSGG | 2 cut(s) | 62, 63 |
| BcoDI | GTCTC | 3 cut(s) | 106, 1297, 1474 |
| BfaI | CTAG | 2 cut(s) | 20, 1422 |
| BfoI | RGCGCY | 1 cut(s) | 449 |
| BfuAI | ACCTGC | 2 cut(s) | 404, 745 |
| BglII | AGATCT | 1 cut(s) | 225 |
| BisI | GCNGC | 7 cut(s) | 169, 172, 181, 219, 584, 810, 1007 |
| BlsI | GCNGC | 7 cut(s) | 170, 173, 182, 220, 585, 811, 1008 |
| Bme18I | GGWCC | 5 cut(s) | 16, 872, 940, 1256, 1283 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 658 |
| BmeT110I | CYCGRG | 2 cut(s) | 61, 350 |
| BmgBI | CACGTC | 1 cut(s) | 508 |
| BmgT120I | GGNCC | 6 cut(s) | 16, 644, 872, 940, 1256, 1283 |
| BmiI | GGNNCC | 4 cut(s) | 559, 646, 759, 847 |
| BmsI | GCATC | 3 cut(s) | 33, 704, 1393 |
| BmtI | GCTAGC | 1 cut(s) | 1425 |
| BpiI | GAAGAC | 1 cut(s) | 367 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 401, 433 |
| BpmI | CTGGAG | 1 cut(s) | 1119 |
| BpuEI | CTTGAG | 2 cut(s) | 410, 608 |
| BpuMI | CCSGG | 2 cut(s) | 62, 63 |
| BsaAI | YACGTR | 2 cut(s) | 547, 1160 |
| BsaBI | GATNNNNATC | 1 cut(s) | 230 |
| BsaWI | WCCGGW | 1 cut(s) | 629 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 228, 448, 477, 517, 629, 648, 653, 654, 842 |
| Bse118I | RCCGGY | 3 cut(s) | 622, 641, 691 |
| Bse1I | ACTGG | 5 cut(s) | 143, 1102, 1168, 1441, 1528 |
| Bse3DI | GCAATG | 2 cut(s) | 636, 672 |
| Bse8I | GATNNNNATC | 1 cut(s) | 230 |
| BseBI | CCWGG | 9 cut(s) | 29, 443, 649, 781, 837, 890, 944, 1058, 1313 |
| BseGI | GGATG | 1 cut(s) | 48 |
| BseJI | GATNNNNATC | 1 cut(s) | 230 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 228, 448, 477, 517, 629, 648, 653, 654, 842 |
| BseMI | GCAATG | 2 cut(s) | 636, 672 |
| BseMII | CTCAG | 2 cut(s) | 657, 690 |
| BseNI | ACTGG | 5 cut(s) | 143, 1102, 1168, 1441, 1528 |
| BseRI | GAGGAG | 3 cut(s) | 422, 425, 746 |
| BseSI | GKGCMC | 2 cut(s) | 68, 788 |
| BseXI | GCAGC | 3 cut(s) | 155, 570, 1018 |
| BseYI | CCCAGC | 1 cut(s) | 448 |
| Bsh1236I | CGCG | 2 cut(s) | 174, 797 |
| Bsh1285I | CGRYCG | 1 cut(s) | 882 |
| BshFI | GGCC | 5 cut(s) | 626, 645, 888, 1311, 1344 |
| BsiEI | CGRYCG | 1 cut(s) | 882 |
| BsiHKAI | GWGCWC | 3 cut(s) | 312, 417, 788 |
| BsiHKCI | CYCGRG | 2 cut(s) | 61, 350 |
| BsiSI | CCGG | 6 cut(s) | 62, 623, 630, 642, 692, 761 |
| BslFI | GGGAC | 4 cut(s) | 80, 424, 665, 1008 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 228, 448, 477, 517, 629, 648, 653, 654, 842 |
| BsmAI | GTCTC | 3 cut(s) | 106, 1297, 1474 |
| BsmBI | CGTCTC | 1 cut(s) | 106 |
| BsmFI | GGGAC | 4 cut(s) | 80, 424, 665, 1008 |
| BsmI | GAATGC | 2 cut(s) | 860, 1132 |
| BsnI | GGCC | 5 cut(s) | 626, 645, 888, 1311, 1344 |
| BsoBI | CYCGRG | 2 cut(s) | 61, 350 |
| Bsp1286I | GDGCHC | 5 cut(s) | 68, 312, 417, 483, 788 |
| Bsp1407I | TGTACA | 1 cut(s) | 1012 |
| BspANI | GGCC | 5 cut(s) | 626, 645, 888, 1311, 1344 |
| BspCNI | CTCAG | 2 cut(s) | 658, 691 |
| BspFNI | CGCG | 2 cut(s) | 174, 797 |
| BspHI | TCATGA | 1 cut(s) | 1180 |
| BspLI | GGNNCC | 4 cut(s) | 559, 646, 759, 847 |
| BspMI | ACCTGC | 2 cut(s) | 404, 745 |
| BspOI | GCTAGC | 1 cut(s) | 1425 |
| BspPI | GGATC | 6 cut(s) | 239, 552, 565, 585, 740, 774 |
| BspQI | GCTCTTC | 1 cut(s) | 317 |
| BsrBI | CCGCTC | 1 cut(s) | 183 |
| BsrDI | GCAATG | 2 cut(s) | 636, 672 |
| BsrFI | RCCGGY | 3 cut(s) | 622, 641, 691 |
| BsrGI | TGTACA | 1 cut(s) | 1012 |
| BsrI | ACTGG | 5 cut(s) | 143, 1102, 1168, 1441, 1528 |
| BssAI | RCCGGY | 3 cut(s) | 622, 641, 691 |
| BssT1I | CCWWGG | 2 cut(s) | 561, 749 |
| Bst2UI | CCWGG | 9 cut(s) | 29, 443, 649, 781, 837, 890, 944, 1058, 1313 |
| Bst4CI | ACNGT | 3 cut(s) | 208, 1303, 1411 |
| Bst6I | CTCTTC | 1 cut(s) | 317 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1544 |
| BstAUI | TGTACA | 1 cut(s) | 1012 |
| BstBAI | YACGTR | 2 cut(s) | 547, 1160 |
| BstC8I | GCNNGC | 8 cut(s) | 624, 643, 693, 774, 814, 1045, 1116, 1423 |
| BstDEI | CTNAG | 2 cut(s) | 666, 699 |
| BstDSI | CCRYGG | 1 cut(s) | 47 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 840 |
| BstF5I | GGATG | 1 cut(s) | 48 |
| BstFNI | CGCG | 2 cut(s) | 174, 797 |
| BstH2I | RGCGCY | 1 cut(s) | 449 |
| BstHHI | GCGC | 4 cut(s) | 448, 715, 799, 1049 |
| BstMAI | GTCTC | 3 cut(s) | 106, 1297, 1474 |
| BstMCI | CGRYCG | 1 cut(s) | 882 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 177, 180, 243, 252, 355, 589, 1544 |
| BstNI | CCWGG | 9 cut(s) | 29, 443, 649, 781, 837, 890, 944, 1058, 1313 |
| BstNSI | RCATGY | 2 cut(s) | 142, 1028 |
| BstSLI | GKGCMC | 2 cut(s) | 68, 788 |
| BstUI | CGCG | 2 cut(s) | 174, 797 |
| BstV1I | GCAGC | 3 cut(s) | 155, 570, 1018 |
| BstV2I | GAAGAC | 1 cut(s) | 367 |
| BstX2I | RGATCY | 4 cut(s) | 225, 231, 557, 745 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 856 |
| BstYI | RGATCY | 4 cut(s) | 225, 231, 557, 745 |
| BsuRI | GGCC | 5 cut(s) | 626, 645, 888, 1311, 1344 |
| BtgI | CCRYGG | 1 cut(s) | 47 |
| BtrI | CACGTC | 1 cut(s) | 508 |
| BtsCI | GGATG | 1 cut(s) | 48 |
| BtsIMutI | CAGTG | 1 cut(s) | 1143 |
| BveI | ACCTGC | 2 cut(s) | 404, 745 |
| Cac8I | GCNNGC | 8 cut(s) | 624, 643, 693, 774, 814, 1045, 1116, 1423 |
| CaiI | CAGNNNCTG | 1 cut(s) | 448 |
| CciI | TCATGA | 1 cut(s) | 1180 |
| CfoI | GCGC | 4 cut(s) | 448, 715, 799, 1049 |
| Cfr10I | RCCGGY | 3 cut(s) | 622, 641, 691 |
| Cfr13I | GGNCC | 6 cut(s) | 16, 644, 872, 940, 1256, 1283 |
| Cfr9I | CCCGGG | 1 cut(s) | 61 |
| CseI | GACGC | 2 cut(s) | 79, 163 |
| CsiI | ACCWGGT | 2 cut(s) | 779, 1056 |
| Csp6I | GTAC | 3 cut(s) | 1013, 1028, 1320 |
| CviAII | CATG | 5 cut(s) | 139, 400, 1025, 1181, 1329 |
| CviQI | GTAC | 3 cut(s) | 1013, 1028, 1320 |
| DdeI | CTNAG | 2 cut(s) | 666, 699 |
| DraI | TTTAAA | 1 cut(s) | 1144 |
| DraIII | CACNNNGTG | 1 cut(s) | 783 |
| DriI | GACNNNNNGTC | 1 cut(s) | 658 |
| EaeI | YGGCCR | 2 cut(s) | 624, 1309 |
| Eam1104I | CTCTTC | 1 cut(s) | 317 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 658 |
| EarI | CTCTTC | 1 cut(s) | 317 |
| EciI | GGCGGA | 3 cut(s) | 94, 357, 779 |
| Ecl136II | GAGCTC | 2 cut(s) | 310, 415 |
| Eco130I | CCWWGG | 2 cut(s) | 561, 749 |
| Eco24I | GRGCYC | 3 cut(s) | 312, 417, 483 |
| Eco47I | GGWCC | 5 cut(s) | 16, 872, 940, 1256, 1283 |
| Eco53kI | GAGCTC | 2 cut(s) | 310, 415 |
| Eco88I | CYCGRG | 2 cut(s) | 61, 350 |
| EcoICRI | GAGCTC | 2 cut(s) | 310, 415 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 840 |
| EcoO109I | RGGNCCY | 2 cut(s) | 940, 1283 |
| EcoRI | GAATTC | 1 cut(s) | 8 |
| EcoRII | CCWGG | 9 cut(s) | 27, 441, 647, 779, 835, 888, 942, 1056, 1311 |
| EcoT14I | CCWWGG | 2 cut(s) | 561, 749 |
| EcoT38I | GRGCYC | 3 cut(s) | 312, 417, 483 |
| ErhI | CCWWGG | 2 cut(s) | 561, 749 |
| Esp3I | CGTCTC | 1 cut(s) | 106 |
| FaeI | CATG | 5 cut(s) | 142, 403, 1028, 1184, 1332 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1137, 1169 |
| FaqI | GGGAC | 4 cut(s) | 80, 424, 665, 1008 |
| FatI | CATG | 5 cut(s) | 138, 399, 1024, 1180, 1328 |
| FauI | CCCGC | 1 cut(s) | 310 |
| FauNDI | CATATG | 1 cut(s) | 1557 |
| FbaI | TGATCA | 1 cut(s) | 1177 |
| FblI | GTMKAC | 2 cut(s) | 111, 390 |
| Fnu4HI | GCNGC | 7 cut(s) | 169, 172, 181, 219, 584, 810, 1007 |
| FokI | GGATG | 1 cut(s) | 55 |
| FriOI | GRGCYC | 3 cut(s) | 312, 417, 483 |
| Fsp4HI | GCNGC | 7 cut(s) | 169, 172, 181, 219, 584, 810, 1007 |
| FspBI | CTAG | 2 cut(s) | 20, 1422 |
| FspI | TGCGCA | 1 cut(s) | 1048 |
| GlaI | GCGC | 4 cut(s) | 447, 714, 798, 1048 |
| GluI | GCNGC | 7 cut(s) | 169, 172, 181, 219, 584, 810, 1007 |
| GsaI | CCCAGC | 1 cut(s) | 452 |
| GsuI | CTGGAG | 1 cut(s) | 1119 |
| HaeII | RGCGCY | 1 cut(s) | 449 |
| HaeIII | GGCC | 5 cut(s) | 626, 645, 888, 1311, 1344 |
| HapII | CCGG | 6 cut(s) | 62, 623, 630, 642, 692, 761 |
| HgaI | GACGC | 2 cut(s) | 79, 163 |
| HhaI | GCGC | 4 cut(s) | 448, 715, 799, 1049 |
| Hin1II | CATG | 5 cut(s) | 142, 403, 1028, 1184, 1332 |
| Hin6I | GCGC | 4 cut(s) | 446, 713, 797, 1047 |
| HinP1I | GCGC | 4 cut(s) | 446, 713, 797, 1047 |
| HincII | GTYRAC | 1 cut(s) | 391 |
| HindII | GTYRAC | 1 cut(s) | 391 |
| HinfI | GANTC | 8 cut(s) | 23, 77, 341, 364, 522, 633, 953, 1148 |
| HpaII | CCGG | 6 cut(s) | 62, 623, 630, 642, 692, 761 |
| HphI | GGTGA | 2 cut(s) | 478, 1187 |
| Hpy166II | GTNNAC | 8 cut(s) | 16, 81, 112, 391, 505, 511, 786, 872 |
| Hpy188I | TCNGA | 8 cut(s) | 42, 120, 289, 667, 700, 919, 1297, 1476 |
| Hpy188III | TCNNGA | 6 cut(s) | 229, 352, 493, 843, 1181, 1503 |
| Hpy8I | GTNNAC | 8 cut(s) | 16, 81, 112, 391, 505, 511, 786, 872 |
| Hpy99I | CGWCG | 7 cut(s) | 95, 212, 293, 349, 364, 389, 392 |
| HpyAV | CCTTC | 6 cut(s) | 139, 208, 250, 499, 878, 1384 |
| HpyCH4III | ACNGT | 3 cut(s) | 208, 1303, 1411 |
| HpyCH4IV | ACGT | 5 cut(s) | 54, 507, 546, 1159, 1233 |
| HpyCH4V | TGCA | 7 cut(s) | 399, 677, 739, 786, 1085, 1118, 1328 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 177, 180, 243, 252, 355, 589, 1544 |
| HpyF3I | CTNAG | 2 cut(s) | 666, 699 |
| HpySE526I | ACGT | 5 cut(s) | 54, 507, 546, 1159, 1233 |
| Hsp92II | CATG | 5 cut(s) | 142, 403, 1028, 1184, 1332 |
| HspAI | GCGC | 4 cut(s) | 446, 713, 797, 1047 |
| KroI | GCCGGC | 3 cut(s) | 622, 641, 691 |
| KroNI | GCCGGC | 3 cut(s) | 624, 643, 693 |
| Ksp22I | TGATCA | 1 cut(s) | 1177 |
| LguI | GCTCTTC | 1 cut(s) | 317 |
| LmnI | GCTCC | 5 cut(s) | 188, 412, 495, 824, 845 |
| Lsp1109I | GCAGC | 3 cut(s) | 155, 570, 1018 |
| LweI | GCATC | 3 cut(s) | 33, 704, 1393 |
| MabI | ACCWGGT | 2 cut(s) | 779, 1056 |
| MaeI | CTAG | 2 cut(s) | 20, 1422 |
| MaeII | ACGT | 5 cut(s) | 54, 507, 546, 1159, 1233 |
| MaeIII | GTNAC | 1 cut(s) | 1489 |
| MbiI | CCGCTC | 1 cut(s) | 183 |
| MboII | GAAGA | 5 cut(s) | 304, 367, 373, 1345, 1518 |
| MflI | RGATCY | 4 cut(s) | 225, 231, 557, 745 |
| MhlI | GDGCHC | 5 cut(s) | 68, 312, 417, 483, 788 |
| MlsI | TGGCCA | 1 cut(s) | 1311 |
| MluNI | TGGCCA | 1 cut(s) | 1311 |
| MlyI | GAGTC | 5 cut(s) | 86, 335, 358, 642, 1142 |
| MmeI | TCCRAC | 2 cut(s) | 312, 708 |
| Mox20I | TGGCCA | 1 cut(s) | 1311 |
| MroNI | GCCGGC | 3 cut(s) | 622, 641, 691 |
| MroXI | GAANNNNTTC | 1 cut(s) | 924 |
| MscI | TGGCCA | 1 cut(s) | 1311 |
| MseI | TTAA | 5 cut(s) | 801, 1077, 1143, 1236, 1386 |
| MslI | CAYNNNNRTG | 4 cut(s) | 398, 700, 1363, 1467 |
| Msp20I | TGGCCA | 1 cut(s) | 1311 |
| MspA1I | CMGCKG | 2 cut(s) | 168, 583 |
| MspI | CCGG | 6 cut(s) | 62, 623, 630, 642, 692, 761 |
| Mva1269I | GAATGC | 2 cut(s) | 860, 1132 |
| MvaI | CCWGG | 9 cut(s) | 29, 443, 649, 781, 837, 890, 944, 1058, 1313 |
| MvnI | CGCG | 2 cut(s) | 174, 797 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 177, 180, 243, 252, 355, 589, 1544 |
| NaeI | GCCGGC | 3 cut(s) | 624, 643, 693 |
| NciI | CCSGG | 2 cut(s) | 62, 63 |
| NdeI | CATATG | 1 cut(s) | 1557 |
| NgoMIV | GCCGGC | 3 cut(s) | 622, 641, 691 |
| NheI | GCTAGC | 1 cut(s) | 1421 |
| NlaIII | CATG | 5 cut(s) | 142, 403, 1028, 1184, 1332 |
| NlaIV | GGNNCC | 4 cut(s) | 559, 646, 759, 847 |
| NmeAIII | GCCGAG | 1 cut(s) | 331 |
| NsbI | TGCGCA | 1 cut(s) | 1048 |
| NspI | RCATGY | 2 cut(s) | 142, 1028 |
| PaeR7I | CTCGAG | 1 cut(s) | 350 |
| PagI | TCATGA | 1 cut(s) | 1180 |
| PaqCI | CACCTGC | 1 cut(s) | 404 |
| PasI | CCCWGGG | 1 cut(s) | 648 |
| PciI | ACATGT | 1 cut(s) | 1024 |
| PciSI | GCTCTTC | 1 cut(s) | 317 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 498 |
| PctI | GAATGC | 2 cut(s) | 860, 1132 |
| PdiI | GCCGGC | 3 cut(s) | 624, 643, 693 |
| PdmI | GAANNNNTTC | 1 cut(s) | 924 |
| PfeI | GAWTC | 3 cut(s) | 23, 522, 953 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 228, 448, 517 |
| PkrI | GCNGC | 7 cut(s) | 170, 173, 182, 220, 585, 811, 1008 |
| PleI | GAGTC | 5 cut(s) | 85, 335, 358, 641, 1142 |
| PpsI | GAGTC | 5 cut(s) | 85, 335, 358, 641, 1142 |
| Ppu21I | YACGTR | 2 cut(s) | 547, 1160 |
| PpuMI | RGGWCCY | 2 cut(s) | 940, 1283 |
| PscI | ACATGT | 1 cut(s) | 1024 |
| Psp124BI | GAGCTC | 2 cut(s) | 312, 417 |
| Psp5II | RGGWCCY | 2 cut(s) | 940, 1283 |
| Psp6I | CCWGG | 9 cut(s) | 27, 441, 647, 779, 835, 888, 942, 1056, 1311 |
| PspFI | CCCAGC | 1 cut(s) | 448 |
| PspGI | CCWGG | 9 cut(s) | 27, 441, 647, 779, 835, 888, 942, 1056, 1311 |
| PspN4I | GGNNCC | 4 cut(s) | 559, 646, 759, 847 |
| PspPI | GGNCC | 6 cut(s) | 16, 644, 872, 940, 1256, 1283 |
| PspPPI | RGGWCCY | 2 cut(s) | 940, 1283 |
| PstNI | CAGNNNCTG | 1 cut(s) | 448 |
| PsuI | RGATCY | 4 cut(s) | 225, 231, 557, 745 |
| PvuII | CAGCTG | 1 cut(s) | 583 |
| RsaI | GTAC | 3 cut(s) | 1014, 1029, 1321 |
| RsaNI | GTAC | 3 cut(s) | 1013, 1028, 1320 |
| RseI | CAYNNNNRTG | 4 cut(s) | 398, 700, 1363, 1467 |
| SacI | GAGCTC | 2 cut(s) | 312, 417 |
| SalI | GTCGAC | 1 cut(s) | 389 |
| SapI | GCTCTTC | 1 cut(s) | 317 |
| SaqAI | TTAA | 5 cut(s) | 801, 1077, 1143, 1236, 1386 |
| SatI | GCNGC | 7 cut(s) | 169, 172, 181, 219, 584, 810, 1007 |
| Sau96I | GGNCC | 6 cut(s) | 16, 644, 872, 940, 1256, 1283 |
| SchI | GAGTC | 5 cut(s) | 86, 335, 358, 642, 1142 |
| SduI | GDGCHC | 5 cut(s) | 68, 312, 417, 483, 788 |
| SexAI | ACCWGGT | 2 cut(s) | 779, 1056 |
| SfaNI | GCATC | 3 cut(s) | 33, 704, 1393 |
| Sfr274I | CTCGAG | 1 cut(s) | 350 |
| SinI | GGWCC | 5 cut(s) | 16, 872, 940, 1256, 1283 |
| SlaI | CTCGAG | 1 cut(s) | 350 |
| SmaI | CCCGGG | 1 cut(s) | 63 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 398, 700, 1363, 1467 |
| SmlI | CTYRAG | 3 cut(s) | 350, 425, 587 |
| SmoI | CTYRAG | 3 cut(s) | 350, 425, 587 |
| SspI | AATATT | 1 cut(s) | 1374 |
| SspMI | CTAG | 2 cut(s) | 20, 1422 |
| SstI | GAGCTC | 2 cut(s) | 312, 417 |
| StyI | CCWWGG | 2 cut(s) | 561, 749 |
| TaaI | ACNGT | 3 cut(s) | 208, 1303, 1411 |
| TaiI | ACGT | 5 cut(s) | 57, 510, 549, 1162, 1236 |
| TaqI | TCGA | 6 cut(s) | 210, 333, 351, 390, 405, 878 |
| TaqII | GACCGA | 1 cut(s) | 896 |
| TatI | WGTACW | 3 cut(s) | 1012, 1027, 1319 |
| TauI | GCSGC | 4 cut(s) | 174, 183, 221, 812 |
| TfiI | GAWTC | 3 cut(s) | 23, 522, 953 |
| Tru1I | TTAA | 5 cut(s) | 801, 1077, 1143, 1236, 1386 |
| Tru9I | TTAA | 5 cut(s) | 801, 1077, 1143, 1236, 1386 |
| TscAI | CASTG | 1 cut(s) | 1143 |
| TseI | GCWGC | 3 cut(s) | 168, 583, 1006 |
| TspDTI | ATGAA | 3 cut(s) | 367, 853, 959 |
| TspGWI | ACGGA | 1 cut(s) | 175 |
| TspMI | CCCGGG | 1 cut(s) | 61 |
| TspRI | CASTG | 1 cut(s) | 1143 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 228, 448, 517 |
| VneI | GTGCAC | 1 cut(s) | 784 |
| VpaK11BI | GGWCC | 5 cut(s) | 16, 872, 940, 1256, 1283 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 840 |
| XapI | RAATTY | 2 cut(s) | 8, 707 |
| XceI | RCATGY | 2 cut(s) | 142, 1028 |
| XhoI | CTCGAG | 1 cut(s) | 350 |
| XmaI | CCCGGG | 1 cut(s) | 61 |
| XmiI | GTMKAC | 2 cut(s) | 111, 390 |
| XmnI | GAANNNNTTC | 1 cut(s) | 924 |
| XspI | CTAG | 2 cut(s) | 20, 1422 |