transport protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G21630 |
| fragaria_vesca | FvH4_7g08110 FvH4_7g08110 FvH4_7g08110 |
| malus_domestica | MD02G1230100.v1.1 MD07G1082300.v1.1 |
| prunus_persica | Prupe.2G107900_v2.0.a1 |
| pyrus_communis | pycom02g19950 pycom07g06560 |
| rosa_chinensis | RchiOBHm_Chr1g0341181 |
| rosa_laevigata | RLG00000029068 |
| rosa_multiflora | Rmu_sc0004092.1_g000025 Rmu_sc0010892.1_g000009 Rmu_sc0019537.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00311780 |
| rosa_rugosa | Rorug01G0159700.1 |
| rosa_samantha | Rh1AG174000 Rh1BG141900 Rh1CG161800 |
| rosa_wichuraiana | Rw1G014450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2187 |
| AarI | CACCTGC | 1 cut(s) | 185 |
| Acc36I | ACCTGC | 1 cut(s) | 185 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 228, 448, 517 |
| AccBSI | CCGCTC | 3 cut(s) | 163, 183, 434 |
| AccI | GTMKAC | 1 cut(s) | 390 |
| AccII | CGCG | 1 cut(s) | 305 |
| AccIII | TCCGGA | 1 cut(s) | 460 |
| AclWI | GGATC | 6 cut(s) | 239, 471, 565, 1813, 2031, 2265 |
| AcoI | YGGCCR | 1 cut(s) | 1129 |
| AcsI | RAATTY | 1 cut(s) | 8 |
| AcuI | CTGAAG | 1 cut(s) | 1795 |
| AcvI | CACGTG | 1 cut(s) | 396 |
| AcyI | GRCGYC | 2 cut(s) | 695, 1956 |
| AfaI | GTAC | 6 cut(s) | 323, 504, 759, 1014, 1321, 2109 |
| AflIII | ACRYGT | 4 cut(s) | 393, 395, 505, 1024 |
| AhlI | ACTAGT | 1 cut(s) | 1105 |
| AjiI | CACGTC | 1 cut(s) | 1586 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 21, 53 |
| Alw21I | GWGCWC | 4 cut(s) | 312, 665, 788, 1669 |
| Alw26I | GTCTC | 3 cut(s) | 106, 485, 1474 |
| Alw44I | GTGCAC | 1 cut(s) | 784 |
| AlwI | GGATC | 6 cut(s) | 239, 471, 565, 1813, 2031, 2265 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1571, 2026 |
| Ama87I | CYCGRG | 2 cut(s) | 350, 648 |
| Aor13HI | TCCGGA | 1 cut(s) | 460 |
| AoxI | GGCC | 9 cut(s) | 620, 752, 846, 872, 886, 1129, 1342, 1894, 2145 |
| ApaI | GGGCCC | 2 cut(s) | 850, 876 |
| ApaLI | GTGCAC | 1 cut(s) | 784 |
| ApeKI | GCWGC | 8 cut(s) | 168, 583, 776, 813, 1006, 1565, 1568, 1922 |
| ApoI | RAATTY | 1 cut(s) | 8 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 62, 94, 1678, 1710 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 924, 2100 |
| AspLEI | GCGC | 2 cut(s) | 715, 799 |
| AsuC2I | CCSGG | 5 cut(s) | 679, 781, 837, 850, 1793 |
| AsuHPI | GGTGA | 3 cut(s) | 241, 1187, 2131 |
| AsuII | TTCGAA | 1 cut(s) | 40 |
| AvaI | CYCGRG | 2 cut(s) | 350, 648 |
| AvaII | GGWCC | 9 cut(s) | 16, 495, 577, 644, 745, 940, 1256, 1283, 1520 |
| BaeGI | GKGCMC | 4 cut(s) | 788, 850, 876, 1051 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1646, 1679 |
| BalI | TGGCCA | 1 cut(s) | 1131 |
| BanII | GRGCYC | 3 cut(s) | 312, 850, 876 |
| BauI | CACGAG | 1 cut(s) | 2067 |
| BbrPI | CACGTG | 1 cut(s) | 396 |
| BbsI | GAAGAC | 3 cut(s) | 367, 446, 2242 |
| Bbv12I | GWGCWC | 4 cut(s) | 312, 665, 788, 1669 |
| BbvI | GCAGC | 8 cut(s) | 155, 570, 763, 825, 1018, 1555, 1577, 1909 |
| BccI | CCATC | 6 cut(s) | 116, 338, 1503, 1629, 1705, 2069 |
| BceAI | ACGGC | 2 cut(s) | 49, 962 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 656, 690 |
| BclI | TGATCA | 2 cut(s) | 766, 2128 |
| BcnI | CCSGG | 5 cut(s) | 679, 781, 837, 850, 1793 |
| BcoDI | GTCTC | 3 cut(s) | 106, 485, 1474 |
| BcuI | ACTAGT | 1 cut(s) | 1105 |
| BfaI | CTAG | 3 cut(s) | 1106, 1422, 1589 |
| BfmI | CTRYAG | 1 cut(s) | 1532 |
| BfuAI | ACCTGC | 1 cut(s) | 185 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1931 |
| BglII | AGATCT | 1 cut(s) | 225 |
| BlpI | GCTNAGC | 1 cut(s) | 800 |
| Bme18I | GGWCC | 9 cut(s) | 16, 495, 577, 644, 745, 940, 1256, 1283, 1520 |
| BmeT110I | CYCGRG | 2 cut(s) | 350, 648 |
| BmgBI | CACGTC | 1 cut(s) | 1586 |
| BmiI | GGNNCC | 5 cut(s) | 496, 747, 847, 848, 874 |
| BmrI | ACTGGG | 3 cut(s) | 92, 313, 639 |
| BmsI | GCATC | 2 cut(s) | 1274, 1393 |
| BmuI | ACTGGG | 3 cut(s) | 92, 313, 639 |
| BpiI | GAAGAC | 3 cut(s) | 367, 446, 2242 |
| BpmI | CTGGAG | 3 cut(s) | 511, 1119, 2249 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 800 |
| Bpu14I | TTCGAA | 1 cut(s) | 40 |
| BpuEI | CTTGAG | 2 cut(s) | 410, 593 |
| BpuMI | CCSGG | 5 cut(s) | 679, 781, 837, 850, 1793 |
| BsaAI | YACGTR | 2 cut(s) | 396, 1658 |
| BsaBI | GATNNNNATC | 2 cut(s) | 230, 2079 |
| BsaHI | GRCGYC | 2 cut(s) | 695, 1956 |
| BsaI | GGTCTC | 1 cut(s) | 485 |
| BsaJI | CCNNGG | 8 cut(s) | 47, 303, 617, 647, 749, 879, 889, 1718 |
| BsaWI | WCCGGW | 2 cut(s) | 370, 460 |
| Bse118I | RCCGGY | 2 cut(s) | 691, 760 |
| Bse1I | ACTGG | 7 cut(s) | 98, 319, 528, 634, 1102, 1168, 2105 |
| Bse3DI | GCAATG | 2 cut(s) | 672, 1926 |
| Bse8I | GATNNNNATC | 2 cut(s) | 230, 2079 |
| BseAI | TCCGGA | 1 cut(s) | 460 |
| BseDI | CCNNGG | 8 cut(s) | 47, 303, 617, 647, 749, 879, 889, 1718 |
| BseGI | GGATG | 2 cut(s) | 1801, 2221 |
| BseJI | GATNNNNATC | 2 cut(s) | 230, 2079 |
| BseMI | GCAATG | 2 cut(s) | 672, 1926 |
| BseMII | CTCAG | 3 cut(s) | 1602, 1778, 2156 |
| BseNI | ACTGG | 7 cut(s) | 98, 319, 528, 634, 1102, 1168, 2105 |
| BseRI | GAGGAG | 5 cut(s) | 422, 425, 746, 1519, 2055 |
| BseSI | GKGCMC | 4 cut(s) | 788, 850, 876, 1051 |
| BseXI | GCAGC | 8 cut(s) | 155, 570, 763, 825, 1018, 1555, 1577, 1909 |
| Bsh1236I | CGCG | 1 cut(s) | 305 |
| BshFI | GGCC | 9 cut(s) | 622, 754, 848, 874, 888, 1131, 1344, 1896, 2147 |
| BsiHKAI | GWGCWC | 4 cut(s) | 312, 665, 788, 1669 |
| BsiHKCI | CYCGRG | 2 cut(s) | 350, 648 |
| BsiSI | CCGG | 9 cut(s) | 371, 461, 679, 692, 761, 781, 836, 850, 1793 |
| BslFI | GGGAC | 4 cut(s) | 80, 508, 665, 1008 |
| BsmAI | GTCTC | 3 cut(s) | 106, 485, 1474 |
| BsmFI | GGGAC | 4 cut(s) | 80, 508, 665, 1008 |
| BsmI | GAATGC | 1 cut(s) | 48 |
| BsnI | GGCC | 9 cut(s) | 622, 754, 848, 874, 888, 1131, 1344, 1896, 2147 |
| Bso31I | GGTCTC | 1 cut(s) | 485 |
| BsoBI | CYCGRG | 2 cut(s) | 350, 648 |
| Bsp119I | TTCGAA | 1 cut(s) | 40 |
| Bsp120I | GGGCCC | 2 cut(s) | 846, 872 |
| Bsp1286I | GDGCHC | 7 cut(s) | 312, 665, 788, 850, 876, 1051, 1669 |
| Bsp13I | TCCGGA | 1 cut(s) | 460 |
| Bsp1407I | TGTACA | 1 cut(s) | 1012 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 800 |
| Bsp19I | CCATGG | 1 cut(s) | 47 |
| BspANI | GGCC | 9 cut(s) | 622, 754, 848, 874, 888, 1131, 1344, 1896, 2147 |
| BspCNI | CTCAG | 3 cut(s) | 1603, 1777, 2155 |
| BspEI | TCCGGA | 1 cut(s) | 460 |
| BspFNI | CGCG | 1 cut(s) | 305 |
| BspLI | GGNNCC | 5 cut(s) | 496, 747, 847, 848, 874 |
| BspMI | ACCTGC | 1 cut(s) | 185 |
| BspPI | GGATC | 6 cut(s) | 239, 471, 565, 1813, 2031, 2265 |
| BspQI | GCTCTTC | 1 cut(s) | 317 |
| BspT104I | TTCGAA | 1 cut(s) | 40 |
| BspTNI | GGTCTC | 1 cut(s) | 485 |
| BsrBI | CCGCTC | 3 cut(s) | 163, 183, 434 |
| BsrDI | GCAATG | 2 cut(s) | 672, 1926 |
| BsrFI | RCCGGY | 2 cut(s) | 691, 760 |
| BsrGI | TGTACA | 1 cut(s) | 1012 |
| BsrI | ACTGG | 7 cut(s) | 98, 319, 528, 634, 1102, 1168, 2105 |
| BssAI | RCCGGY | 2 cut(s) | 691, 760 |
| BssECI | CCNNGG | 8 cut(s) | 47, 303, 617, 647, 749, 879, 889, 1718 |
| BssNI | GRCGYC | 2 cut(s) | 695, 1956 |
| BssSI | CACGAG | 1 cut(s) | 2067 |
| BssT1I | CCWWGG | 2 cut(s) | 47, 749 |
| Bst2BI | CACGAG | 1 cut(s) | 2067 |
| Bst4CI | ACNGT | 7 cut(s) | 208, 1205, 1303, 1411, 1694, 1722, 1969 |
| Bst6I | CTCTTC | 1 cut(s) | 317 |
| BstACI | GRCGYC | 2 cut(s) | 695, 1956 |
| BstAUI | TGTACA | 1 cut(s) | 1012 |
| BstBAI | YACGTR | 2 cut(s) | 396, 1658 |
| BstBI | TTCGAA | 1 cut(s) | 40 |
| BstC8I | GCNNGC | 4 cut(s) | 693, 774, 811, 1116 |
| BstDEI | CTNAG | 5 cut(s) | 800, 1611, 1764, 1951, 2142 |
| BstDSI | CCRYGG | 4 cut(s) | 47, 303, 879, 1718 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1055 |
| BstF5I | GGATG | 2 cut(s) | 1801, 2221 |
| BstFNI | CGCG | 1 cut(s) | 305 |
| BstHHI | GCGC | 2 cut(s) | 715, 799 |
| BstMAI | GTCTC | 3 cut(s) | 106, 485, 1474 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 177, 180, 243, 252, 669, 810, 1928, 1931 |
| BstNSI | RCATGY | 2 cut(s) | 509, 1028 |
| BstSFI | CTRYAG | 1 cut(s) | 1532 |
| BstSLI | GKGCMC | 4 cut(s) | 788, 850, 876, 1051 |
| BstSNI | TACGTA | 1 cut(s) | 1658 |
| BstUI | CGCG | 1 cut(s) | 305 |
| BstV1I | GCAGC | 8 cut(s) | 155, 570, 763, 825, 1018, 1555, 1577, 1909 |
| BstV2I | GAAGAC | 3 cut(s) | 367, 446, 2242 |
| BstX2I | RGATCY | 3 cut(s) | 225, 231, 2023 |
| BstYI | RGATCY | 3 cut(s) | 225, 231, 2023 |
| BsuRI | GGCC | 9 cut(s) | 622, 754, 848, 874, 888, 1131, 1344, 1896, 2147 |
| BtgI | CCRYGG | 4 cut(s) | 47, 303, 879, 1718 |
| BtrI | CACGTC | 1 cut(s) | 1586 |
| BtsCI | GGATG | 2 cut(s) | 1801, 2221 |
| BtsI | GCAGTG | 1 cut(s) | 792 |
| BtsIMutI | CAGTG | 3 cut(s) | 535, 792, 1407 |
| BveI | ACCTGC | 1 cut(s) | 185 |
| Cac8I | GCNNGC | 4 cut(s) | 693, 774, 811, 1116 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1571, 2026 |
| CfoI | GCGC | 2 cut(s) | 715, 799 |
| Cfr10I | RCCGGY | 2 cut(s) | 691, 760 |
| Cfr42I | CCGCGG | 1 cut(s) | 306 |
| CseI | GACGC | 2 cut(s) | 684, 1964 |
| CsiI | ACCWGGT | 1 cut(s) | 1056 |
| Csp6I | GTAC | 6 cut(s) | 322, 503, 758, 1013, 1320, 2108 |
| CviAII | CATG | 8 cut(s) | 48, 139, 506, 1025, 1329, 1579, 1982, 2135 |
| CviQI | GTAC | 6 cut(s) | 322, 503, 758, 1013, 1320, 2108 |
| DdeI | CTNAG | 5 cut(s) | 800, 1611, 1764, 1951, 2142 |
| EaeI | YGGCCR | 1 cut(s) | 1129 |
| Eam1104I | CTCTTC | 1 cut(s) | 317 |
| EarI | CTCTTC | 1 cut(s) | 317 |
| EciI | GGCGGA | 1 cut(s) | 94 |
| Ecl136II | GAGCTC | 1 cut(s) | 310 |
| Eco105I | TACGTA | 1 cut(s) | 1658 |
| Eco130I | CCWWGG | 2 cut(s) | 47, 749 |
| Eco24I | GRGCYC | 3 cut(s) | 312, 850, 876 |
| Eco31I | GGTCTC | 1 cut(s) | 485 |
| Eco47I | GGWCC | 9 cut(s) | 16, 495, 577, 644, 745, 940, 1256, 1283, 1520 |
| Eco53kI | GAGCTC | 1 cut(s) | 310 |
| Eco57I | CTGAAG | 1 cut(s) | 1795 |
| Eco72I | CACGTG | 1 cut(s) | 396 |
| Eco88I | CYCGRG | 2 cut(s) | 350, 648 |
| EcoICRI | GAGCTC | 1 cut(s) | 310 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1055 |
| EcoO109I | RGGNCCY | 6 cut(s) | 495, 745, 846, 873, 940, 1283 |
| EcoRI | GAATTC | 1 cut(s) | 8 |
| EcoT14I | CCWWGG | 2 cut(s) | 47, 749 |
| EcoT38I | GRGCYC | 3 cut(s) | 312, 850, 876 |
| ErhI | CCWWGG | 2 cut(s) | 47, 749 |
| FaeI | CATG | 8 cut(s) | 51, 142, 509, 1028, 1332, 1582, 1985, 2138 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2187, 2219 |
| FaqI | GGGAC | 4 cut(s) | 80, 508, 665, 1008 |
| FatI | CATG | 8 cut(s) | 47, 138, 505, 1024, 1328, 1578, 1981, 2134 |
| FauI | CCCGC | 4 cut(s) | 168, 260, 310, 765 |
| FbaI | TGATCA | 2 cut(s) | 766, 2128 |
| FblI | GTMKAC | 1 cut(s) | 390 |
| FokI | GGATG | 2 cut(s) | 1808, 2228 |
| FriOI | GRGCYC | 3 cut(s) | 312, 850, 876 |
| FspBI | CTAG | 3 cut(s) | 1106, 1422, 1589 |
| GlaI | GCGC | 2 cut(s) | 714, 798 |
| GsuI | CTGGAG | 3 cut(s) | 511, 1119, 2249 |
| HaeIII | GGCC | 9 cut(s) | 622, 754, 848, 874, 888, 1131, 1344, 1896, 2147 |
| HapII | CCGG | 9 cut(s) | 371, 461, 679, 692, 761, 781, 836, 850, 1793 |
| HgaI | GACGC | 2 cut(s) | 684, 1964 |
| HhaI | GCGC | 2 cut(s) | 715, 799 |
| Hin1I | GRCGYC | 2 cut(s) | 695, 1956 |
| Hin1II | CATG | 8 cut(s) | 51, 142, 509, 1028, 1332, 1582, 1985, 2138 |
| Hin6I | GCGC | 2 cut(s) | 713, 797 |
| HinP1I | GCGC | 2 cut(s) | 713, 797 |
| HincII | GTYRAC | 2 cut(s) | 391, 571 |
| HindII | GTYRAC | 2 cut(s) | 391, 571 |
| HpaII | CCGG | 9 cut(s) | 371, 461, 679, 692, 761, 781, 836, 850, 1793 |
| HphI | GGTGA | 3 cut(s) | 241, 1187, 2131 |
| Hpy166II | GTNNAC | 6 cut(s) | 81, 324, 391, 511, 571, 786 |
| Hpy188I | TCNGA | 6 cut(s) | 120, 289, 700, 919, 1297, 1814 |
| Hpy8I | GTNNAC | 6 cut(s) | 81, 324, 391, 511, 571, 786 |
| Hpy99I | CGWCG | 6 cut(s) | 293, 349, 389, 392, 700, 1761 |
| HpyAV | CCTTC | 9 cut(s) | 139, 250, 508, 556, 736, 878, 1384, 1875, 2184 |
| HpyCH4III | ACNGT | 7 cut(s) | 208, 1205, 1303, 1411, 1694, 1722, 1969 |
| HpyCH4IV | ACGT | 5 cut(s) | 395, 1585, 1657, 1759, 1917 |
| HpyCH4V | TGCA | 6 cut(s) | 739, 786, 1070, 1085, 1265, 1328 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 177, 180, 243, 252, 669, 810, 1928, 1931 |
| HpyF3I | CTNAG | 5 cut(s) | 800, 1611, 1764, 1951, 2142 |
| HpySE526I | ACGT | 5 cut(s) | 395, 1585, 1657, 1759, 1917 |
| Hsp92I | GRCGYC | 2 cut(s) | 695, 1956 |
| Hsp92II | CATG | 8 cut(s) | 51, 142, 509, 1028, 1332, 1582, 1985, 2138 |
| HspAI | GCGC | 2 cut(s) | 713, 797 |
| Kpn2I | TCCGGA | 1 cut(s) | 460 |
| KroI | GCCGGC | 1 cut(s) | 691 |
| KroNI | GCCGGC | 1 cut(s) | 693 |
| Ksp22I | TGATCA | 2 cut(s) | 766, 2128 |
| KspI | CCGCGG | 1 cut(s) | 306 |
| LguI | GCTCTTC | 1 cut(s) | 317 |
| LmnI | GCTCC | 7 cut(s) | 168, 188, 307, 412, 824, 2068, 2203 |
| Lsp1109I | GCAGC | 8 cut(s) | 155, 570, 763, 825, 1018, 1555, 1577, 1909 |
| LweI | GCATC | 2 cut(s) | 1274, 1393 |
| MabI | ACCWGGT | 1 cut(s) | 1056 |
| MaeI | CTAG | 3 cut(s) | 1106, 1422, 1589 |
| MaeII | ACGT | 5 cut(s) | 395, 1585, 1657, 1759, 1917 |
| MaeIII | GTNAC | 1 cut(s) | 1489 |
| MbiI | CCGCTC | 3 cut(s) | 163, 183, 434 |
| MboII | GAAGA | 9 cut(s) | 304, 367, 446, 449, 541, 1345, 1692, 1723, 2242 |
| MfeI | CAATTG | 1 cut(s) | 2051 |
| MflI | RGATCY | 3 cut(s) | 225, 231, 2023 |
| MhlI | GDGCHC | 7 cut(s) | 312, 665, 788, 850, 876, 1051, 1669 |
| MlsI | TGGCCA | 1 cut(s) | 1131 |
| MluNI | TGGCCA | 1 cut(s) | 1131 |
| MlyI | GAGTC | 3 cut(s) | 86, 335, 1142 |
| MmeI | TCCRAC | 4 cut(s) | 312, 678, 708, 1320 |
| Mox20I | TGGCCA | 1 cut(s) | 1131 |
| MroI | TCCGGA | 1 cut(s) | 460 |
| MroNI | GCCGGC | 1 cut(s) | 691 |
| MroXI | GAANNNNTTC | 2 cut(s) | 924, 2100 |
| MscI | TGGCCA | 1 cut(s) | 1131 |
| MseI | TTAA | 6 cut(s) | 717, 1077, 1143, 1155, 1386, 1782 |
| MslI | CAYNNNNRTG | 3 cut(s) | 398, 1363, 1467 |
| Msp20I | TGGCCA | 1 cut(s) | 1131 |
| MspA1I | CMGCKG | 5 cut(s) | 168, 305, 583, 772, 1568 |
| MspI | CCGG | 9 cut(s) | 371, 461, 679, 692, 761, 781, 836, 850, 1793 |
| MunI | CAATTG | 1 cut(s) | 2051 |
| Mva1269I | GAATGC | 1 cut(s) | 48 |
| MvnI | CGCG | 1 cut(s) | 305 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 177, 180, 243, 252, 669, 810, 1928, 1931 |
| NaeI | GCCGGC | 1 cut(s) | 693 |
| NciI | CCSGG | 5 cut(s) | 679, 781, 837, 850, 1793 |
| NcoI | CCATGG | 1 cut(s) | 47 |
| NgoMIV | GCCGGC | 1 cut(s) | 691 |
| NlaIII | CATG | 8 cut(s) | 51, 142, 509, 1028, 1332, 1582, 1985, 2138 |
| NlaIV | GGNNCC | 5 cut(s) | 496, 747, 847, 848, 874 |
| NspI | RCATGY | 2 cut(s) | 509, 1028 |
| NspV | TTCGAA | 1 cut(s) | 40 |
| PaeR7I | CTCGAG | 1 cut(s) | 350 |
| PaqCI | CACCTGC | 1 cut(s) | 185 |
| PciI | ACATGT | 2 cut(s) | 505, 1024 |
| PciSI | GCTCTTC | 1 cut(s) | 317 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1499 |
| PctI | GAATGC | 1 cut(s) | 48 |
| PdiI | GCCGGC | 1 cut(s) | 693 |
| PdmI | GAANNNNTTC | 2 cut(s) | 924, 2100 |
| PfeI | GAWTC | 7 cut(s) | 23, 58, 925, 953, 1858, 1942, 2170 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 228, 448, 517 |
| PfoI | TCCNGGA | 2 cut(s) | 12, 2206 |
| PleI | GAGTC | 3 cut(s) | 85, 335, 1142 |
| PmaCI | CACGTG | 1 cut(s) | 396 |
| PmlI | CACGTG | 1 cut(s) | 396 |
| PpsI | GAGTC | 3 cut(s) | 85, 335, 1142 |
| Ppu21I | YACGTR | 2 cut(s) | 396, 1658 |
| PpuMI | RGGWCCY | 4 cut(s) | 495, 745, 940, 1283 |
| PscI | ACATGT | 2 cut(s) | 505, 1024 |
| PsiI | TTATAA | 1 cut(s) | 2187 |
| Psp124BI | GAGCTC | 1 cut(s) | 312 |
| Psp5II | RGGWCCY | 4 cut(s) | 495, 745, 940, 1283 |
| PspCI | CACGTG | 1 cut(s) | 396 |
| PspN4I | GGNNCC | 5 cut(s) | 496, 747, 847, 848, 874 |
| PspOMI | GGGCCC | 2 cut(s) | 846, 872 |
| PspPPI | RGGWCCY | 4 cut(s) | 495, 745, 940, 1283 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1571, 2026 |
| PsuI | RGATCY | 3 cut(s) | 225, 231, 2023 |
| PvuII | CAGCTG | 2 cut(s) | 583, 1568 |
| RsaI | GTAC | 6 cut(s) | 323, 504, 759, 1014, 1321, 2109 |
| RsaNI | GTAC | 6 cut(s) | 322, 503, 758, 1013, 1320, 2108 |
| RseI | CAYNNNNRTG | 3 cut(s) | 398, 1363, 1467 |
| SacI | GAGCTC | 1 cut(s) | 312 |
| SacII | CCGCGG | 1 cut(s) | 306 |
| SalI | GTCGAC | 1 cut(s) | 389 |
| SapI | GCTCTTC | 1 cut(s) | 317 |
| SaqAI | TTAA | 6 cut(s) | 717, 1077, 1143, 1155, 1386, 1782 |
| SchI | GAGTC | 3 cut(s) | 86, 335, 1142 |
| SduI | GDGCHC | 7 cut(s) | 312, 665, 788, 850, 876, 1051, 1669 |
| SexAI | ACCWGGT | 1 cut(s) | 1056 |
| SfaNI | GCATC | 2 cut(s) | 1274, 1393 |
| SfcI | CTRYAG | 1 cut(s) | 1532 |
| Sfr274I | CTCGAG | 1 cut(s) | 350 |
| Sfr303I | CCGCGG | 1 cut(s) | 306 |
| SfuI | TTCGAA | 1 cut(s) | 40 |
| SgrBI | CCGCGG | 1 cut(s) | 306 |
| SinI | GGWCC | 9 cut(s) | 16, 495, 577, 644, 745, 940, 1256, 1283, 1520 |
| SlaI | CTCGAG | 1 cut(s) | 350 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 398, 1363, 1467 |
| SmlI | CTYRAG | 3 cut(s) | 350, 425, 608 |
| SmoI | CTYRAG | 3 cut(s) | 350, 425, 608 |
| SnaBI | TACGTA | 1 cut(s) | 1658 |
| SpeI | ACTAGT | 1 cut(s) | 1105 |
| SspI | AATATT | 1 cut(s) | 1374 |
| SspMI | CTAG | 3 cut(s) | 1106, 1422, 1589 |
| SstI | GAGCTC | 1 cut(s) | 312 |
| StyI | CCWWGG | 2 cut(s) | 47, 749 |
| TaaI | ACNGT | 7 cut(s) | 208, 1205, 1303, 1411, 1694, 1722, 1969 |
| TaiI | ACGT | 5 cut(s) | 398, 1588, 1660, 1762, 1920 |
| TaqI | TCGA | 8 cut(s) | 40, 333, 351, 390, 405, 560, 905, 1502 |
| TatI | WGTACW | 3 cut(s) | 321, 1012, 1319 |
| TauI | GCSGC | 4 cut(s) | 174, 183, 221, 1934 |
| TfiI | GAWTC | 7 cut(s) | 23, 58, 925, 953, 1858, 1942, 2170 |
| Tru1I | TTAA | 6 cut(s) | 717, 1077, 1143, 1155, 1386, 1782 |
| Tru9I | TTAA | 6 cut(s) | 717, 1077, 1143, 1155, 1386, 1782 |
| TscAI | CASTG | 3 cut(s) | 535, 799, 1414 |
| TseI | GCWGC | 8 cut(s) | 168, 583, 776, 813, 1006, 1565, 1568, 1922 |
| TspGWI | ACGGA | 2 cut(s) | 175, 896 |
| TspRI | CASTG | 3 cut(s) | 535, 799, 1414 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 228, 448, 517 |
| VneI | GTGCAC | 1 cut(s) | 784 |
| VpaK11BI | GGWCC | 9 cut(s) | 16, 495, 577, 644, 745, 940, 1256, 1283, 1520 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1055 |
| XapI | RAATTY | 1 cut(s) | 8 |
| XceI | RCATGY | 2 cut(s) | 509, 1028 |
| XhoI | CTCGAG | 1 cut(s) | 350 |
| XmiI | GTMKAC | 1 cut(s) | 390 |
| XmnI | GAANNNNTTC | 2 cut(s) | 924, 2100 |
| XspI | CTAG | 3 cut(s) | 1106, 1422, 1589 |