transport protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G21630 |
| fragaria_vesca | FvH4_7g08110 FvH4_7g08110 FvH4_7g08110 |
| malus_domestica | MD02G1230100.v1.1 MD07G1082300.v1.1 |
| prunus_persica | Prupe.2G107900_v2.0.a1 |
| pyrus_communis | pycom02g19950 pycom07g06560 |
| rosa_chinensis | RchiOBHm_Chr1g0341181 |
| rosa_laevigata | RLG00000029068 |
| rosa_multiflora | Rmu_sc0004092.1_g000025 Rmu_sc0010892.1_g000009 Rmu_sc0019537.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00311780 |
| rosa_rugosa | Rorug01G0159700.1 |
| rosa_samantha | Rh1AG174000 Rh1BG141900 Rh1CG161800 |
| rosa_wichuraiana | Rw1G014450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2025 |
| AarI | CACCTGC | 1 cut(s) | 404 |
| AatII | GACGTC | 2 cut(s) | 570, 1758 |
| Acc36I | ACCTGC | 2 cut(s) | 185, 404 |
| AccB1I | GGYRCC | 1 cut(s) | 645 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 228, 517 |
| AccBSI | CCGCTC | 2 cut(s) | 183, 434 |
| AccI | GTMKAC | 2 cut(s) | 390, 454 |
| AccII | CGCG | 1 cut(s) | 764 |
| AclWI | GGATC | 6 cut(s) | 552, 565, 774, 1073, 1869, 2103 |
| AcoI | YGGCCR | 4 cut(s) | 303, 752, 810, 1129 |
| AcsI | RAATTY | 1 cut(s) | 8 |
| AcuI | CTGAAG | 3 cut(s) | 1517, 1633, 1682 |
| AcyI | GRCGYC | 2 cut(s) | 567, 1755 |
| AfaI | GTAC | 4 cut(s) | 175, 323, 1113, 1947 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 228, 517, 629, 842, 843, 1057, 2045 |
| AflIII | ACRYGT | 1 cut(s) | 1024 |
| AgsI | TTSAA | 9 cut(s) | 553, 590, 1091, 1379, 1415, 1600, 1827, 2008, 2120 |
| AhlI | ACTAGT | 2 cut(s) | 1105, 1322 |
| AjnI | CCWGG | 4 cut(s) | 61, 1056, 1522, 1953 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1011, 1043 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 404, 436 |
| Alw21I | GWGCWC | 5 cut(s) | 312, 417, 665, 1295, 1322 |
| Alw26I | GTCTC | 3 cut(s) | 106, 444, 1474 |
| AlwI | GGATC | 6 cut(s) | 552, 565, 774, 1073, 1869, 2103 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 448, 1571 |
| Ama87I | CYCGRG | 1 cut(s) | 350 |
| AoxI | GGCC | 9 cut(s) | 303, 752, 774, 810, 872, 1129, 1342, 1732, 1983 |
| ApeKI | GCWGC | 8 cut(s) | 158, 168, 688, 1006, 1565, 1568, 1760, 1769 |
| ApoI | RAATTY | 1 cut(s) | 8 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 62, 94 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 924, 1938 |
| AsuC2I | CCSGG | 4 cut(s) | 302, 461, 837, 2046 |
| AsuHPI | GGTGA | 3 cut(s) | 241, 357, 1969 |
| AsuII | TTCGAA | 1 cut(s) | 40 |
| AvaI | CYCGRG | 1 cut(s) | 350 |
| AvaII | GGWCC | 7 cut(s) | 16, 495, 745, 940, 1256, 1283, 1520 |
| BaeGI | GKGCMC | 4 cut(s) | 648, 762, 837, 1051 |
| BalI | TGGCCA | 2 cut(s) | 754, 1131 |
| BamHI | GGATCC | 1 cut(s) | 557 |
| BanI | GGYRCC | 1 cut(s) | 645 |
| BanII | GRGCYC | 4 cut(s) | 312, 417, 483, 850 |
| BauI | CACGAG | 2 cut(s) | 473, 1905 |
| BbsI | GAAGAC | 2 cut(s) | 367, 2080 |
| Bbv12I | GWGCWC | 5 cut(s) | 312, 417, 665, 1295, 1322 |
| BbvI | GCAGC | 8 cut(s) | 145, 155, 675, 1018, 1555, 1577, 1747, 1781 |
| BccI | CCATC | 5 cut(s) | 116, 290, 338, 1503, 1907 |
| BceAI | ACGGC | 1 cut(s) | 156 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 656, 690, 702, 736 |
| BciT130I | CCWGG | 4 cut(s) | 63, 1058, 1524, 1955 |
| BcnI | CCSGG | 4 cut(s) | 302, 461, 837, 2046 |
| BcoDI | GTCTC | 3 cut(s) | 106, 444, 1474 |
| BcuI | ACTAGT | 2 cut(s) | 1105, 1322 |
| BfaI | CTAG | 6 cut(s) | 944, 1044, 1106, 1323, 1422, 1589 |
| BfmI | CTRYAG | 1 cut(s) | 1572 |
| BfuAI | ACCTGC | 2 cut(s) | 185, 404 |
| BglII | AGATCT | 1 cut(s) | 225 |
| Bme1390I | CCNGG | 8 cut(s) | 63, 302, 461, 837, 1058, 1524, 1955, 2046 |
| Bme18I | GGWCC | 7 cut(s) | 16, 495, 745, 940, 1256, 1283, 1520 |
| BmeT110I | CYCGRG | 1 cut(s) | 350 |
| BmiI | GGNNCC | 4 cut(s) | 496, 559, 647, 747 |
| BmrFI | CCNGG | 8 cut(s) | 63, 302, 461, 837, 1058, 1524, 1955, 2046 |
| BmrI | ACTGGG | 3 cut(s) | 92, 313, 639 |
| BmsI | GCATC | 4 cut(s) | 773, 1274, 1393, 1683 |
| BmuI | ACTGGG | 3 cut(s) | 92, 313, 639 |
| BpiI | GAAGAC | 2 cut(s) | 367, 2080 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 401, 433 |
| BpmI | CTGGAG | 2 cut(s) | 1119, 2087 |
| Bpu10I | CCTNAGC | 1 cut(s) | 800 |
| Bpu14I | TTCGAA | 1 cut(s) | 40 |
| BpuEI | CTTGAG | 3 cut(s) | 410, 593, 1292 |
| BpuMI | CCSGG | 4 cut(s) | 302, 461, 837, 2046 |
| Bsa29I | ATCGAT | 1 cut(s) | 1921 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1917 |
| BsaHI | GRCGYC | 2 cut(s) | 567, 1755 |
| BsaJI | CCNNGG | 6 cut(s) | 47, 61, 561, 749, 762, 1018 |
| BsaWI | WCCGGW | 2 cut(s) | 370, 527 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 228, 517, 629, 842, 843, 1057, 2045 |
| Bse118I | RCCGGY | 1 cut(s) | 622 |
| Bse1I | ACTGG | 7 cut(s) | 98, 319, 634, 755, 1102, 1441, 1943 |
| Bse3DI | GCAATG | 4 cut(s) | 636, 672, 1764, 1830 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1917 |
| BseBI | CCWGG | 4 cut(s) | 63, 1058, 1524, 1955 |
| BseCI | ATCGAT | 1 cut(s) | 1921 |
| BseDI | CCNNGG | 6 cut(s) | 47, 61, 561, 749, 762, 1018 |
| BseGI | GGATG | 1 cut(s) | 2059 |
| BseJI | GATNNNNATC | 1 cut(s) | 1917 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 228, 517, 629, 842, 843, 1057, 2045 |
| BseMI | GCAATG | 4 cut(s) | 636, 672, 1764, 1830 |
| BseMII | CTCAG | 3 cut(s) | 455, 1602, 1994 |
| BseNI | ACTGG | 7 cut(s) | 98, 319, 634, 755, 1102, 1441, 1943 |
| BseRI | GAGGAG | 4 cut(s) | 422, 425, 746, 1893 |
| BseSI | GKGCMC | 4 cut(s) | 648, 762, 837, 1051 |
| BseX3I | CGGCCG | 1 cut(s) | 303 |
| BseXI | GCAGC | 8 cut(s) | 145, 155, 675, 1018, 1555, 1577, 1747, 1781 |
| BseYI | CCCAGC | 1 cut(s) | 641 |
| Bsh1236I | CGCG | 1 cut(s) | 764 |
| Bsh1285I | CGRYCG | 1 cut(s) | 306 |
| BshFI | GGCC | 9 cut(s) | 305, 754, 776, 812, 874, 1131, 1344, 1734, 1985 |
| BshNI | GGYRCC | 1 cut(s) | 645 |
| BshVI | ATCGAT | 1 cut(s) | 1921 |
| BsiEI | CGRYCG | 1 cut(s) | 306 |
| BsiHKAI | GWGCWC | 5 cut(s) | 312, 417, 665, 1295, 1322 |
| BsiHKCI | CYCGRG | 1 cut(s) | 350 |
| BsiSI | CCGG | 7 cut(s) | 302, 371, 461, 528, 623, 837, 2045 |
| BslFI | GGGAC | 4 cut(s) | 80, 508, 518, 1008 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 228, 517, 629, 842, 843, 1057, 2045 |
| BsmAI | GTCTC | 3 cut(s) | 106, 444, 1474 |
| BsmFI | GGGAC | 4 cut(s) | 80, 508, 518, 1008 |
| BsmI | GAATGC | 1 cut(s) | 48 |
| BsnI | GGCC | 9 cut(s) | 305, 754, 776, 812, 874, 1131, 1344, 1734, 1985 |
| BsoBI | CYCGRG | 1 cut(s) | 350 |
| Bsp119I | TTCGAA | 1 cut(s) | 40 |
| Bsp19I | CCATGG | 1 cut(s) | 47 |
| BspANI | GGCC | 9 cut(s) | 305, 754, 776, 812, 874, 1131, 1344, 1734, 1985 |
| BspCNI | CTCAG | 3 cut(s) | 454, 1603, 1993 |
| BspDI | ATCGAT | 1 cut(s) | 1921 |
| BspFNI | CGCG | 1 cut(s) | 764 |
| BspLI | GGNNCC | 4 cut(s) | 496, 559, 647, 747 |
| BspMI | ACCTGC | 2 cut(s) | 185, 404 |
| BspPI | GGATC | 6 cut(s) | 552, 565, 774, 1073, 1869, 2103 |
| BspQI | GCTCTTC | 1 cut(s) | 317 |
| BspT104I | TTCGAA | 1 cut(s) | 40 |
| BspT107I | GGYRCC | 1 cut(s) | 645 |
| BsrBI | CCGCTC | 2 cut(s) | 183, 434 |
| BsrDI | GCAATG | 4 cut(s) | 636, 672, 1764, 1830 |
| BsrFI | RCCGGY | 1 cut(s) | 622 |
| BsrI | ACTGG | 7 cut(s) | 98, 319, 634, 755, 1102, 1441, 1943 |
| BssAI | RCCGGY | 1 cut(s) | 622 |
| BssECI | CCNNGG | 6 cut(s) | 47, 61, 561, 749, 762, 1018 |
| BssNI | GRCGYC | 2 cut(s) | 567, 1755 |
| BssSI | CACGAG | 2 cut(s) | 473, 1905 |
| BssT1I | CCWWGG | 4 cut(s) | 47, 561, 749, 1018 |
| Bst2BI | CACGAG | 2 cut(s) | 473, 1905 |
| Bst2UI | CCWGG | 4 cut(s) | 63, 1058, 1524, 1955 |
| Bst4CI | ACNGT | 6 cut(s) | 208, 650, 999, 1303, 1411, 1807 |
| Bst6I | CTCTTC | 1 cut(s) | 317 |
| BstACI | GRCGYC | 2 cut(s) | 567, 1755 |
| BstBI | TTCGAA | 1 cut(s) | 40 |
| BstC8I | GCNNGC | 7 cut(s) | 693, 762, 814, 829, 833, 872, 1585 |
| BstDEI | CTNAG | 5 cut(s) | 441, 800, 1154, 1611, 1980 |
| BstDSI | CCRYGG | 2 cut(s) | 47, 762 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1055 |
| BstF5I | GGATG | 1 cut(s) | 2059 |
| BstFNI | CGCG | 1 cut(s) | 764 |
| BstMAI | GTCTC | 3 cut(s) | 106, 444, 1474 |
| BstMCI | CGRYCG | 1 cut(s) | 306 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 177, 243, 252, 669, 1766, 1769 |
| BstNI | CCWGG | 4 cut(s) | 63, 1058, 1524, 1955 |
| BstNSI | RCATGY | 1 cut(s) | 1028 |
| BstSCI | CCNGG | 8 cut(s) | 61, 300, 459, 835, 1056, 1522, 1953, 2044 |
| BstSFI | CTRYAG | 1 cut(s) | 1572 |
| BstSLI | GKGCMC | 4 cut(s) | 648, 762, 837, 1051 |
| BstUI | CGCG | 1 cut(s) | 764 |
| BstV1I | GCAGC | 8 cut(s) | 145, 155, 675, 1018, 1555, 1577, 1747, 1781 |
| BstV2I | GAAGAC | 2 cut(s) | 367, 2080 |
| BstX2I | RGATCY | 3 cut(s) | 225, 557, 1861 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 820 |
| BstYI | RGATCY | 3 cut(s) | 225, 557, 1861 |
| BstZI | CGGCCG | 1 cut(s) | 303 |
| Bsu15I | ATCGAT | 1 cut(s) | 1921 |
| BsuRI | GGCC | 9 cut(s) | 305, 754, 776, 812, 874, 1131, 1344, 1734, 1985 |
| BsuTUI | ATCGAT | 1 cut(s) | 1921 |
| BtgI | CCRYGG | 2 cut(s) | 47, 762 |
| BtsCI | GGATG | 1 cut(s) | 2059 |
| BtsI | GCAGTG | 2 cut(s) | 792, 984 |
| BtsIMutI | CAGTG | 3 cut(s) | 762, 792, 984 |
| BveI | ACCTGC | 2 cut(s) | 185, 404 |
| Cac8I | GCNNGC | 7 cut(s) | 693, 762, 814, 829, 833, 872, 1585 |
| CaiI | CAGNNNCTG | 2 cut(s) | 448, 1571 |
| Cfr10I | RCCGGY | 1 cut(s) | 622 |
| Cfr42I | CCGCGG | 1 cut(s) | 765 |
| ClaI | ATCGAT | 1 cut(s) | 1921 |
| CseI | GACGC | 1 cut(s) | 1802 |
| CsiI | ACCWGGT | 1 cut(s) | 1056 |
| Csp6I | GTAC | 4 cut(s) | 174, 322, 1112, 1946 |
| CviQI | GTAC | 4 cut(s) | 174, 322, 1112, 1946 |
| DdeI | CTNAG | 5 cut(s) | 441, 800, 1154, 1611, 1980 |
| EaeI | YGGCCR | 4 cut(s) | 303, 752, 810, 1129 |
| EagI | CGGCCG | 1 cut(s) | 303 |
| Eam1104I | CTCTTC | 1 cut(s) | 317 |
| EarI | CTCTTC | 1 cut(s) | 317 |
| EciI | GGCGGA | 2 cut(s) | 94, 1858 |
| Ecl136II | GAGCTC | 2 cut(s) | 310, 415 |
| EclXI | CGGCCG | 1 cut(s) | 303 |
| Eco130I | CCWWGG | 4 cut(s) | 47, 561, 749, 1018 |
| Eco24I | GRGCYC | 4 cut(s) | 312, 417, 483, 850 |
| Eco32I | GATATC | 1 cut(s) | 1856 |
| Eco47I | GGWCC | 7 cut(s) | 16, 495, 745, 940, 1256, 1283, 1520 |
| Eco52I | CGGCCG | 1 cut(s) | 303 |
| Eco53kI | GAGCTC | 2 cut(s) | 310, 415 |
| Eco57I | CTGAAG | 3 cut(s) | 1517, 1633, 1682 |
| Eco88I | CYCGRG | 1 cut(s) | 350 |
| EcoICRI | GAGCTC | 2 cut(s) | 310, 415 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1055 |
| EcoO109I | RGGNCCY | 4 cut(s) | 495, 745, 940, 1283 |
| EcoRII | CCWGG | 4 cut(s) | 61, 1056, 1522, 1953 |
| EcoRV | GATATC | 1 cut(s) | 1856 |
| EcoT14I | CCWWGG | 4 cut(s) | 47, 561, 749, 1018 |
| EcoT38I | GRGCYC | 4 cut(s) | 312, 417, 483, 850 |
| ErhI | CCWWGG | 4 cut(s) | 47, 561, 749, 1018 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2025, 2057 |
| FaqI | GGGAC | 4 cut(s) | 80, 508, 518, 1008 |
| FauI | CCCGC | 5 cut(s) | 260, 700, 769, 863, 1958 |
| FblI | GTMKAC | 2 cut(s) | 390, 454 |
| FokI | GGATG | 1 cut(s) | 2066 |
| FriOI | GRGCYC | 4 cut(s) | 312, 417, 483, 850 |
| FspBI | CTAG | 6 cut(s) | 944, 1044, 1106, 1323, 1422, 1589 |
| GsaI | CCCAGC | 1 cut(s) | 645 |
| GsuI | CTGGAG | 2 cut(s) | 1119, 2087 |
| HaeIII | GGCC | 9 cut(s) | 305, 754, 776, 812, 874, 1131, 1344, 1734, 1985 |
| HapII | CCGG | 7 cut(s) | 302, 371, 461, 528, 623, 837, 2045 |
| HgaI | GACGC | 1 cut(s) | 1802 |
| Hin1I | GRCGYC | 2 cut(s) | 567, 1755 |
| HincII | GTYRAC | 3 cut(s) | 391, 571, 1663 |
| HindII | GTYRAC | 3 cut(s) | 391, 571, 1663 |
| HinfI | GANTC | 8 cut(s) | 23, 77, 341, 953, 1148, 1482, 1780, 2008 |
| HpaII | CCGG | 7 cut(s) | 302, 371, 461, 528, 623, 837, 2045 |
| HphI | GGTGA | 3 cut(s) | 241, 357, 1969 |
| Hpy166II | GTNNAC | 8 cut(s) | 81, 324, 391, 455, 511, 571, 1015, 1663 |
| Hpy188I | TCNGA | 8 cut(s) | 120, 289, 700, 771, 852, 919, 1297, 1652 |
| Hpy8I | GTNNAC | 8 cut(s) | 81, 324, 391, 455, 511, 571, 1015, 1663 |
| Hpy99I | CGWCG | 6 cut(s) | 212, 349, 389, 392, 1760, 2072 |
| HpyAV | CCTTC | 8 cut(s) | 508, 736, 878, 885, 1384, 1541, 1713, 2022 |
| HpyCH4III | ACNGT | 6 cut(s) | 208, 650, 999, 1303, 1411, 1807 |
| HpyCH4IV | ACGT | 4 cut(s) | 54, 567, 1159, 1755 |
| HpyCH4V | TGCA | 8 cut(s) | 399, 713, 739, 786, 1085, 1265, 1328, 1769 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 177, 243, 252, 669, 1766, 1769 |
| HpyF3I | CTNAG | 5 cut(s) | 441, 800, 1154, 1611, 1980 |
| HpySE526I | ACGT | 4 cut(s) | 54, 567, 1159, 1755 |
| Hsp92I | GRCGYC | 2 cut(s) | 567, 1755 |
| KspI | CCGCGG | 1 cut(s) | 765 |
| LguI | GCTCTTC | 1 cut(s) | 317 |
| LmnI | GCTCC | 7 cut(s) | 188, 412, 577, 824, 1317, 1906, 2041 |
| Lsp1109I | GCAGC | 8 cut(s) | 145, 155, 675, 1018, 1555, 1577, 1747, 1781 |
| LweI | GCATC | 4 cut(s) | 773, 1274, 1393, 1683 |
| MabI | ACCWGGT | 1 cut(s) | 1056 |
| MaeI | CTAG | 6 cut(s) | 944, 1044, 1106, 1323, 1422, 1589 |
| MaeII | ACGT | 4 cut(s) | 54, 567, 1159, 1755 |
| MaeIII | GTNAC | 4 cut(s) | 650, 1489, 1675, 1893 |
| MbiI | CCGCTC | 2 cut(s) | 183, 434 |
| MboII | GAAGA | 6 cut(s) | 304, 367, 1288, 1345, 1518, 2080 |
| MfeI | CAATTG | 1 cut(s) | 1889 |
| MflI | RGATCY | 3 cut(s) | 225, 557, 1861 |
| MlsI | TGGCCA | 2 cut(s) | 754, 1131 |
| MluCI | AATT | 6 cut(s) | 8, 515, 718, 1080, 1380, 1889 |
| MluNI | TGGCCA | 2 cut(s) | 754, 1131 |
| MlyI | GAGTC | 4 cut(s) | 86, 335, 1142, 1476 |
| MmeI | TCCRAC | 1 cut(s) | 708 |
| Mox20I | TGGCCA | 2 cut(s) | 754, 1131 |
| MroXI | GAANNNNTTC | 2 cut(s) | 924, 1938 |
| MscI | TGGCCA | 2 cut(s) | 754, 1131 |
| MseI | TTAA | 6 cut(s) | 717, 1077, 1143, 1167, 1386, 1620 |
| MslI | CAYNNNNRTG | 3 cut(s) | 398, 1363, 1467 |
| Msp20I | TGGCCA | 2 cut(s) | 754, 1131 |
| MspA1I | CMGCKG | 3 cut(s) | 168, 764, 1568 |
| MspI | CCGG | 7 cut(s) | 302, 371, 461, 528, 623, 837, 2045 |
| MspR9I | CCNGG | 8 cut(s) | 63, 302, 461, 837, 1058, 1524, 1955, 2046 |
| MunI | CAATTG | 1 cut(s) | 1889 |
| Mva1269I | GAATGC | 1 cut(s) | 48 |
| MvaI | CCWGG | 4 cut(s) | 63, 1058, 1524, 1955 |
| MvnI | CGCG | 1 cut(s) | 764 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 177, 243, 252, 669, 1766, 1769 |
| NciI | CCSGG | 4 cut(s) | 302, 461, 837, 2046 |
| NcoI | CCATGG | 1 cut(s) | 47 |
| NlaIV | GGNNCC | 4 cut(s) | 496, 559, 647, 747 |
| NmeAIII | GCCGAG | 1 cut(s) | 331 |
| NmuCI | GTSAC | 1 cut(s) | 650 |
| NspI | RCATGY | 1 cut(s) | 1028 |
| NspV | TTCGAA | 1 cut(s) | 40 |
| PaeR7I | CTCGAG | 1 cut(s) | 350 |
| PaqCI | CACCTGC | 1 cut(s) | 404 |
| PciI | ACATGT | 1 cut(s) | 1024 |
| PciSI | GCTCTTC | 1 cut(s) | 317 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 384, 498 |
| PctI | GAATGC | 1 cut(s) | 48 |
| PdmI | GAANNNNTTC | 2 cut(s) | 924, 1938 |
| PfeI | GAWTC | 4 cut(s) | 23, 953, 1780, 2008 |
| PflFI | GACNNNGTC | 1 cut(s) | 2072 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 228, 517 |
| PfoI | TCCNGGA | 2 cut(s) | 459, 2044 |
| PleI | GAGTC | 4 cut(s) | 85, 335, 1142, 1476 |
| PpsI | GAGTC | 4 cut(s) | 85, 335, 1142, 1476 |
| PpuMI | RGGWCCY | 4 cut(s) | 495, 745, 940, 1283 |
| PscI | ACATGT | 1 cut(s) | 1024 |
| PsiI | TTATAA | 1 cut(s) | 2025 |
| Psp124BI | GAGCTC | 2 cut(s) | 312, 417 |
| Psp5II | RGGWCCY | 4 cut(s) | 495, 745, 940, 1283 |
| Psp6I | CCWGG | 4 cut(s) | 61, 1056, 1522, 1953 |
| PspFI | CCCAGC | 1 cut(s) | 641 |
| PspGI | CCWGG | 4 cut(s) | 61, 1056, 1522, 1953 |
| PspN4I | GGNNCC | 4 cut(s) | 496, 559, 647, 747 |
| PspPPI | RGGWCCY | 4 cut(s) | 495, 745, 940, 1283 |
| PstNI | CAGNNNCTG | 2 cut(s) | 448, 1571 |
| PsuI | RGATCY | 3 cut(s) | 225, 557, 1861 |
| PsyI | GACNNNGTC | 1 cut(s) | 2072 |
| PvuII | CAGCTG | 1 cut(s) | 1568 |
| RsaI | GTAC | 4 cut(s) | 175, 323, 1113, 1947 |
| RsaNI | GTAC | 4 cut(s) | 174, 322, 1112, 1946 |
| RseI | CAYNNNNRTG | 3 cut(s) | 398, 1363, 1467 |
| SacI | GAGCTC | 2 cut(s) | 312, 417 |
| SacII | CCGCGG | 1 cut(s) | 765 |
| SalI | GTCGAC | 1 cut(s) | 389 |
| SapI | GCTCTTC | 1 cut(s) | 317 |
| SaqAI | TTAA | 6 cut(s) | 717, 1077, 1143, 1167, 1386, 1620 |
| SchI | GAGTC | 4 cut(s) | 86, 335, 1142, 1476 |
| ScrFI | CCNGG | 8 cut(s) | 63, 302, 461, 837, 1058, 1524, 1955, 2046 |
| SexAI | ACCWGGT | 1 cut(s) | 1056 |
| SfaNI | GCATC | 4 cut(s) | 773, 1274, 1393, 1683 |
| SfcI | CTRYAG | 1 cut(s) | 1572 |
| Sfr274I | CTCGAG | 1 cut(s) | 350 |
| Sfr303I | CCGCGG | 1 cut(s) | 765 |
| SfuI | TTCGAA | 1 cut(s) | 40 |
| SgrBI | CCGCGG | 1 cut(s) | 765 |
| SinI | GGWCC | 7 cut(s) | 16, 495, 745, 940, 1256, 1283, 1520 |
| SlaI | CTCGAG | 1 cut(s) | 350 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 398, 1363, 1467 |
| SmlI | CTYRAG | 4 cut(s) | 350, 425, 608, 1271 |
| SmoI | CTYRAG | 4 cut(s) | 350, 425, 608, 1271 |
| SpeI | ACTAGT | 2 cut(s) | 1105, 1322 |
| Sse9I | AATT | 6 cut(s) | 8, 515, 718, 1080, 1380, 1889 |
| SspI | AATATT | 1 cut(s) | 1374 |
| SspMI | CTAG | 6 cut(s) | 944, 1044, 1106, 1323, 1422, 1589 |
| SstI | GAGCTC | 2 cut(s) | 312, 417 |
| StyD4I | CCNGG | 8 cut(s) | 61, 300, 459, 835, 1056, 1522, 1953, 2044 |
| StyI | CCWWGG | 4 cut(s) | 47, 561, 749, 1018 |
| TaaI | ACNGT | 6 cut(s) | 208, 650, 999, 1303, 1411, 1807 |
| TaiI | ACGT | 4 cut(s) | 57, 570, 1162, 1758 |
| TaqI | TCGA | 9 cut(s) | 21, 40, 210, 333, 351, 390, 905, 1502, 1921 |
| TasI | AATT | 6 cut(s) | 8, 515, 718, 1080, 1380, 1889 |
| TatI | WGTACW | 2 cut(s) | 321, 1111 |
| TauI | GCSGC | 3 cut(s) | 183, 221, 812 |
| TfiI | GAWTC | 4 cut(s) | 23, 953, 1780, 2008 |
| Tru1I | TTAA | 6 cut(s) | 717, 1077, 1143, 1167, 1386, 1620 |
| Tru9I | TTAA | 6 cut(s) | 717, 1077, 1143, 1167, 1386, 1620 |
| TscAI | CASTG | 3 cut(s) | 762, 799, 984 |
| TseFI | GTSAC | 1 cut(s) | 650 |
| TseI | GCWGC | 8 cut(s) | 158, 168, 688, 1006, 1565, 1568, 1760, 1769 |
| Tsp45I | GTSAC | 1 cut(s) | 650 |
| TspDTI | ATGAA | 6 cut(s) | 494, 1650, 1704, 1710, 1715, 1808 |
| TspGWI | ACGGA | 2 cut(s) | 175, 1475 |
| TspRI | CASTG | 3 cut(s) | 762, 799, 984 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2072 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 228, 517 |
| VpaK11BI | GGWCC | 7 cut(s) | 16, 495, 745, 940, 1256, 1283, 1520 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1055 |
| XapI | RAATTY | 1 cut(s) | 8 |
| XceI | RCATGY | 1 cut(s) | 1028 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 886 |
| XhoI | CTCGAG | 1 cut(s) | 350 |
| XmiI | GTMKAC | 2 cut(s) | 390, 454 |
| XmnI | GAANNNNTTC | 2 cut(s) | 924, 1938 |
| XspI | CTAG | 6 cut(s) | 944, 1044, 1106, 1323, 1422, 1589 |
| ZraI | GACGTC | 2 cut(s) | 568, 1756 |