FvH4_7g09360
NAC Family

dol-P-Man Man(7)GlcNAc(2)-PP-Dol

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
9008335 .. 9016812
8478 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g09360.t8

Sequence Viewer

Length: 1491 bp
ATGGCTTCCAAGTCTTCGAAATTTCTAGAGCGATTCGGTTACGATGTGCTACTCGGATCAGTAGCTGCGTTTTATGTGTTCATGGCGCCCTACACCAAGGTCGAAGAAAGCTTCAACGTTCAGGCAATGCATGATATTCTATATCATCGGCAAAACTTGGACAATTATGATCATTTGGAGTTTCCGGGAGTTGTTCCTCGGACTTTCCTCGGTGCTTTTCTTGTATCGAGTTTGGCATCCCCTGCTATTCTAGCAATGAACTTGCTGCACATGCCAAAGATTTATGGTCTTTTTACAGTTCGTTTGACTGTAGGTTGCATCATATTATCTACATTACGCTTCTTTCGTCTTCAGGTTAGAGAAAAGTTTGGACGTCAAGTAGAAGCTTACTTTGTAATGCTAACTGCAGCTCAGTTCCACCTTCTGTTCTATTGTACCCGTCCACTTCCTAATATACTAGCTCTAGGTGCAGTCAACTTGGCATATGGATACTGGTTAAAGGAGAAGTCTTATGCAGCTTTAAACTGTTTGATCTTTGCTACAGTTACCCTAAGATGTGATGTTCTGTTACTTCTCTGTCCTATTGGCTTGGAGCTTTTGTTGACTAGATCAATTTCATTATGGAAGGCACTGAAGTACTGCACTTTGTGTGCTCTATTGTGCATAGGTCTTACTGTATTTGTTGATTCAATAATGTGGAGAAGAGTACTTTGGCCTGAGTTTGAAGTTCTCTGGTTCAACTCTGTTCTGAATCGAAGTTCAGAGTGGGGCACACATCCATTTCACTGGTACTTCACTTCAGCACTACCCCGCTCATTGCTTGCTGCATACCCTCTTTTCCTGCTAGGGATCTTACTTGACAGAAGGGTCTTGCCATTCATTATTCCAGTCTTTTCCTTTGTTGTACTATATTCTAAGCTTCCCCATAAGGAGCTCCGCTTTATCATTGGTTCAATTCCAATCTTCAACTTATCTGCCGCAGTTGCAGCTGCTAGAATCTATAACAATAGAAAAAAGACATTCTGGAAGTTTCTCTATGTAATTATGCTCGGATTACTGTTGATCAGTCTAGGGTGCACGGCCATAACTTTCATGGCATCCAATGAGAATTATCCCAGTGGTCATGCTTTACAACATTTGCATAAGATAGGTCATCTTGGGAACAGAACAAATGAAATCTTGGTTCATATTGATACATATTCAGCCATGAATGGAATATCCCGCTTTTGTGAACATGATTTTCCATGGAGATATTCGAAAGAGGAAGGTATTCCGGGGGAAGAATTATGCCAGAGAAATTTCAACTATCTTATCAATGAGCACCCTGCAATCAATGGGTTCAAGTGTCTATCTGCTGTAAATGGGTTCTCACGTGTTCGTCTTCAAAATGGCTTCCCACCAATTTTACTGGTTAAAGAGCCCAAAGTATATATTCACGGAAATGTAAGACACAGCGACATCCTTGACAGAATTTGGCCAGGCTGCTCCTGA

Protein Analysis

497

Amino Acids

56.79

Weight (kDa)

9.22

Isoelectric Point (pI)

41.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_22 PF03901 26 - 333 6.8e-49 Alg9-like mannosyltransferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 866
AatII GACGTC 1 cut(s) 376
AccB1I GGYRCC 1 cut(s) 85
AccBSI CCGCTC 1 cut(s) 813
AciI CCGC 4 cut(s) 811, 937, 978, 1222
AclI AACGTT 1 cut(s) 117
AclWI GGATC 2 cut(s) 64, 857
AcoI YGGCCR 2 cut(s) 1080, 1475
AcsI RAATTY 3 cut(s) 20, 1297, 1470
AcuI CTGAAG 3 cut(s) 335, 653, 783
AcvI CACGTG 1 cut(s) 1373
AcyI GRCGYC 2 cut(s) 86, 373
AdeI CACNNNGTG 1 cut(s) 648
AfaI GTAC 5 cut(s) 436, 638, 708, 791, 906
AflIII ACRYGT 1 cut(s) 1372
AgsI TTSAA 9 cut(s) 115, 690, 725, 739, 954, 967, 1303, 1342, 1385
AjnI CCWGG 1 cut(s) 1477
AjuI GAANNNNNNNTTGG 2 cut(s) 694, 726
Alw21I GWGCWC 4 cut(s) 655, 936, 1079, 1323
Alw44I GTGCAC 1 cut(s) 1075
AlwI GGATC 2 cut(s) 64, 857
AlwNI CAGNNNCTG 1 cut(s) 65
AoxI GGCC 3 cut(s) 713, 1080, 1475
ApaLI GTGCAC 1 cut(s) 1075
ApeKI GCWGC 8 cut(s) 65, 265, 407, 515, 824, 986, 989, 1482
ApoI RAATTY 3 cut(s) 20, 1297, 1470
Asp700I GAANNNNTTC 1 cut(s) 1269
AspLEI GCGC 1 cut(s) 88
AsuC2I CCSGG 2 cut(s) 186, 1275
AsuII TTCGAA 2 cut(s) 17, 1256
BaeGI GKGCMC 2 cut(s) 773, 1079
BalI TGGCCA 1 cut(s) 1477
BanI GGYRCC 1 cut(s) 85
BanII GRGCYC 2 cut(s) 936, 1422
BbrPI CACGTG 1 cut(s) 1373
BbsI GAAGAC 3 cut(s) 6, 341, 1373
Bbv12I GWGCWC 4 cut(s) 655, 936, 1079, 1323
BbvI GCAGC 8 cut(s) 52, 252, 419, 527, 811, 976, 998, 1469
BceAI ACGGC 1 cut(s) 1095
BciT130I CCWGG 1 cut(s) 1479
BciVI GTATCC 1 cut(s) 482
BclI TGATCA 2 cut(s) 169, 1062
BcnI CCSGG 2 cut(s) 186, 1275
BfaI CTAG 8 cut(s) 26, 251, 458, 464, 606, 845, 993, 1070
BfmI CTRYAG 3 cut(s) 309, 405, 540
BfoI RGCGCY 1 cut(s) 89
BfuI GTATCC 1 cut(s) 482
BisI GCNGC 9 cut(s) 66, 266, 408, 516, 825, 978, 987, 990, 1483
BlsI GCNGC 9 cut(s) 67, 267, 409, 517, 826, 979, 988, 991, 1484
BmcAI AGTACT 2 cut(s) 638, 708
Bme1390I CCNGG 3 cut(s) 186, 1275, 1479
BmiI GGNNCC 1 cut(s) 87
BmrFI CCNGG 3 cut(s) 186, 1275, 1479
BmrI ACTGGG 1 cut(s) 1110
BmsI GCATC 3 cut(s) 245, 327, 1106
BmuI ACTGGG 1 cut(s) 1110
BpiI GAAGAC 3 cut(s) 6, 341, 1373
Bpu14I TTCGAA 2 cut(s) 17, 1256
BpuMI CCSGG 2 cut(s) 186, 1275
BsaAI YACGTR 1 cut(s) 1373
BsaHI GRCGYC 2 cut(s) 86, 373
BsaJI CCNNGG 5 cut(s) 96, 197, 208, 1244, 1274
BsaXI ACNNNNNCTCC 2 cut(s) 584, 614
Bse1I ACTGG 5 cut(s) 497, 791, 887, 1116, 1413
Bse3DI GCAATG 3 cut(s) 132, 261, 815
BseBI CCWGG 1 cut(s) 1479
BseDI CCNNGG 5 cut(s) 96, 197, 208, 1244, 1274
BseGI GGATG 4 cut(s) 236, 775, 1097, 1458
BseMI GCAATG 3 cut(s) 132, 261, 815
BseMII CTCAG 2 cut(s) 425, 708
BseNI ACTGG 5 cut(s) 497, 791, 887, 1116, 1413
BseSI GKGCMC 2 cut(s) 773, 1079
BseXI GCAGC 8 cut(s) 52, 252, 419, 527, 811, 976, 998, 1469
BsgI GTGCAG 3 cut(s) 251, 489, 625
BshFI GGCC 3 cut(s) 715, 1082, 1477
BshNI GGYRCC 1 cut(s) 85
BsiHKAI GWGCWC 4 cut(s) 655, 936, 1079, 1323
BsiSI CCGG 2 cut(s) 185, 1274
BsnI GGCC 3 cut(s) 715, 1082, 1477
Bsp119I TTCGAA 2 cut(s) 17, 1256
Bsp1286I GDGCHC 6 cut(s) 655, 773, 936, 1079, 1323, 1422
Bsp143I GATC 6 cut(s) 56, 169, 531, 608, 849, 1062
Bsp19I CCATGG 1 cut(s) 1244
BspACI CCGC 4 cut(s) 811, 937, 978, 1222
BspANI GGCC 3 cut(s) 715, 1082, 1477
BspCNI CTCAG 2 cut(s) 424, 709
BspLI GGNNCC 1 cut(s) 87
BspMAI CTGCAG 1 cut(s) 409
BspPI GGATC 2 cut(s) 64, 857
BspT104I TTCGAA 2 cut(s) 17, 1256
BspT107I GGYRCC 1 cut(s) 85
BsrBI CCGCTC 1 cut(s) 813
BsrDI GCAATG 3 cut(s) 132, 261, 815
BsrI ACTGG 5 cut(s) 497, 791, 887, 1116, 1413
BssECI CCNNGG 5 cut(s) 96, 197, 208, 1244, 1274
BssMI GATC 6 cut(s) 56, 169, 531, 608, 849, 1062
BssNI GRCGYC 2 cut(s) 86, 373
BssT1I CCWWGG 2 cut(s) 96, 1244
Bst2UI CCWGG 1 cut(s) 1479
Bst4CI ACNGT 6 cut(s) 298, 310, 527, 544, 676, 1059
Bst6I CTCTTC 1 cut(s) 697
BstACI GRCGYC 2 cut(s) 86, 373
BstAPI GCANNNNNTGC 1 cut(s) 242
BstBAI YACGTR 1 cut(s) 1373
BstBI TTCGAA 2 cut(s) 17, 1256
BstC8I GCNNGC 1 cut(s) 822
BstDEI CTNAG 4 cut(s) 411, 551, 717, 915
BstDSI CCRYGG 1 cut(s) 1244
BstF5I GGATG 4 cut(s) 236, 775, 1097, 1458
BstH2I RGCGCY 1 cut(s) 89
BstHHI GCGC 1 cut(s) 88
BstKTI GATC 6 cut(s) 59, 172, 534, 611, 852, 1065
BstMBI GATC 6 cut(s) 56, 169, 531, 608, 849, 1062
BstMWI GCNNNNNNNGC 6 cut(s) 242, 251, 271, 467, 983, 986
BstNI CCWGG 1 cut(s) 1479
BstNSI RCATGY 1 cut(s) 274
BstSCI CCNGG 3 cut(s) 184, 1273, 1477
BstSFI CTRYAG 3 cut(s) 309, 405, 540
BstSLI GKGCMC 2 cut(s) 773, 1079
BstV1I GCAGC 8 cut(s) 52, 252, 419, 527, 811, 976, 998, 1469
BstV2I GAAGAC 3 cut(s) 6, 341, 1373
BstX2I RGATCY 1 cut(s) 849
BstXI CCANNNNNNTGG 1 cut(s) 786
BstYI RGATCY 1 cut(s) 849
BsuI GTATCC 1 cut(s) 482
BsuRI GGCC 3 cut(s) 715, 1082, 1477
BtgI CCRYGG 1 cut(s) 1244
BtsCI GGATG 4 cut(s) 236, 775, 1097, 1458
BtsIMutI CAGTG 3 cut(s) 629, 784, 1123
Cac8I GCNNGC 1 cut(s) 822
CaiI CAGNNNCTG 1 cut(s) 65
CfoI GCGC 1 cut(s) 88
Csp6I GTAC 5 cut(s) 435, 637, 707, 790, 905
CviAII CATG 8 cut(s) 82, 131, 271, 1093, 1124, 1207, 1235, 1245
CviQI GTAC 5 cut(s) 435, 637, 707, 790, 905
DdeI CTNAG 4 cut(s) 411, 551, 717, 915
DinI GGCGCC 1 cut(s) 87
DpnI GATC 6 cut(s) 58, 171, 533, 610, 851, 1064
DpnII GATC 6 cut(s) 56, 169, 531, 608, 849, 1062
DraI TTTAAA 1 cut(s) 522
DraIII CACNNNGTG 1 cut(s) 648
DrdI GACNNNNNNGTC 1 cut(s) 866
DseDI GACNNNNNNGTC 1 cut(s) 866
EaeI YGGCCR 2 cut(s) 1080, 1475
Eam1104I CTCTTC 1 cut(s) 697
EarI CTCTTC 1 cut(s) 697
Ecl136II GAGCTC 1 cut(s) 934
Eco130I CCWWGG 2 cut(s) 96, 1244
Eco24I GRGCYC 2 cut(s) 936, 1422
Eco53kI GAGCTC 1 cut(s) 934
Eco57I CTGAAG 3 cut(s) 335, 653, 783
Eco72I CACGTG 1 cut(s) 1373
EcoICRI GAGCTC 1 cut(s) 934
EcoRII CCWGG 1 cut(s) 1477
EcoT14I CCWWGG 2 cut(s) 96, 1244
EcoT22I ATGCAT 1 cut(s) 132
EcoT38I GRGCYC 2 cut(s) 936, 1422
EgeI GGCGCC 1 cut(s) 87
EheI GGCGCC 1 cut(s) 87
ErhI CCWWGG 2 cut(s) 96, 1244
FaeI CATG 8 cut(s) 85, 134, 274, 1096, 1127, 1210, 1238, 1248
FatI CATG 8 cut(s) 81, 130, 270, 1092, 1123, 1206, 1234, 1244
FauI CCCGC 2 cut(s) 818, 1229
FauNDI CATATG 1 cut(s) 484
FbaI TGATCA 2 cut(s) 169, 1062
Fnu4HI GCNGC 9 cut(s) 66, 266, 408, 516, 825, 978, 987, 990, 1483
FokI GGATG 4 cut(s) 223, 762, 1084, 1445
FriOI GRGCYC 2 cut(s) 936, 1422
Fsp4HI GCNGC 9 cut(s) 66, 266, 408, 516, 825, 978, 987, 990, 1483
FspBI CTAG 8 cut(s) 26, 251, 458, 464, 606, 845, 993, 1070
GlaI GCGC 1 cut(s) 87
GluI GCNGC 9 cut(s) 66, 266, 408, 516, 825, 978, 987, 990, 1483
HaeII RGCGCY 1 cut(s) 89
HaeIII GGCC 3 cut(s) 715, 1082, 1477
HapII CCGG 2 cut(s) 185, 1274
HhaI GCGC 1 cut(s) 88
Hin1I GRCGYC 2 cut(s) 86, 373
Hin1II CATG 8 cut(s) 85, 134, 274, 1096, 1127, 1210, 1238, 1248
Hin6I GCGC 1 cut(s) 86
HinP1I GCGC 1 cut(s) 86
HincII GTYRAC 2 cut(s) 475, 603
HindII GTYRAC 2 cut(s) 475, 603
HindIII AAGCTT 3 cut(s) 109, 384, 917
HinfI GANTC 4 cut(s) 33, 686, 751, 996
HpaII CCGG 2 cut(s) 185, 1274
Hpy166II GTNNAC 5 cut(s) 443, 475, 603, 1077, 1232
Hpy188I TCNGA 5 cut(s) 56, 201, 750, 763, 1052
Hpy188III TCNNGA 3 cut(s) 26, 1024, 1488
Hpy8I GTNNAC 5 cut(s) 443, 475, 603, 1077, 1232
HpyAV CCTTC 4 cut(s) 431, 619, 858, 1259
HpyCH4III ACNGT 6 cut(s) 298, 310, 527, 544, 676, 1059
HpyCH4IV ACGT 3 cut(s) 117, 373, 1372
HpyF10VI GCNNNNNNNGC 6 cut(s) 242, 251, 271, 467, 983, 986
HpyF3I CTNAG 4 cut(s) 411, 551, 717, 915
HpySE526I ACGT 3 cut(s) 117, 373, 1372
Hsp92I GRCGYC 2 cut(s) 86, 373
Hsp92II CATG 8 cut(s) 85, 134, 274, 1096, 1127, 1210, 1238, 1248
HspAI GCGC 1 cut(s) 86
KasI GGCGCC 1 cut(s) 85
Ksp22I TGATCA 2 cut(s) 169, 1062
Kzo9I GATC 6 cut(s) 56, 169, 531, 608, 849, 1062
LmnI GCTCC 4 cut(s) 592, 931, 939, 1490
Lsp1109I GCAGC 8 cut(s) 52, 252, 419, 527, 811, 976, 998, 1469
LweI GCATC 3 cut(s) 245, 327, 1106
MaeI CTAG 8 cut(s) 26, 251, 458, 464, 606, 845, 993, 1070
MaeII ACGT 3 cut(s) 117, 373, 1372
MaeIII GTNAC 3 cut(s) 38, 544, 567
MalI GATC 6 cut(s) 58, 171, 533, 610, 851, 1064
MbiI CCGCTC 1 cut(s) 813
MboI GATC 6 cut(s) 56, 169, 531, 608, 849, 1062
MboII GAAGA 7 cut(s) 6, 116, 341, 714, 955, 1292, 1373
MflI RGATCY 1 cut(s) 849
MhlI GDGCHC 6 cut(s) 655, 773, 936, 1079, 1323, 1422
MlsI TGGCCA 1 cut(s) 1477
MluNI TGGCCA 1 cut(s) 1477
Mly113I GGCGCC 1 cut(s) 86
MnlI CCTC 4 cut(s) 207, 218, 843, 1255
Mox20I TGGCCA 1 cut(s) 1477
Mph1103I ATGCAT 1 cut(s) 132
MroXI GAANNNNTTC 1 cut(s) 1269
MscI TGGCCA 1 cut(s) 1477
MseI TTAA 3 cut(s) 497, 521, 1413
MslI CAYNNNNRTG 1 cut(s) 1440
Msp20I TGGCCA 1 cut(s) 1477
MspA1I CMGCKG 1 cut(s) 989
MspI CCGG 2 cut(s) 185, 1274
MspR9I CCNGG 3 cut(s) 186, 1275, 1479
MvaI CCWGG 1 cut(s) 1479
MwoI GCNNNNNNNGC 6 cut(s) 242, 251, 271, 467, 983, 986
NarI GGCGCC 1 cut(s) 86
NciI CCSGG 2 cut(s) 186, 1275
NcoI CCATGG 1 cut(s) 1244
NdeI CATATG 1 cut(s) 484
NdeII GATC 6 cut(s) 56, 169, 531, 608, 849, 1062
NlaIII CATG 8 cut(s) 85, 134, 274, 1096, 1127, 1210, 1238, 1248
NlaIV GGNNCC 1 cut(s) 87
NsiI ATGCAT 1 cut(s) 132
NspI RCATGY 1 cut(s) 274
NspV TTCGAA 2 cut(s) 17, 1256
PcsI WCGNNNNNNNCGW 1 cut(s) 343
PdmI GAANNNNTTC 1 cut(s) 1269
PfeI GAWTC 4 cut(s) 33, 686, 751, 996
PfoI TCCNGGA 1 cut(s) 184
PkrI GCNGC 9 cut(s) 67, 267, 409, 517, 826, 979, 988, 991, 1484
PluTI GGCGCC 1 cut(s) 89
PmaCI CACGTG 1 cut(s) 1373
PmlI CACGTG 1 cut(s) 1373
Ppu21I YACGTR 1 cut(s) 1373
Psp124BI GAGCTC 1 cut(s) 936
Psp1406I AACGTT 1 cut(s) 117
Psp6I CCWGG 1 cut(s) 1477
PspCI CACGTG 1 cut(s) 1373
PspGI CCWGG 1 cut(s) 1477
PspN4I GGNNCC 1 cut(s) 87
PstI CTGCAG 1 cut(s) 409
PstNI CAGNNNCTG 1 cut(s) 65
PsuI RGATCY 1 cut(s) 849
PvuII CAGCTG 1 cut(s) 989
RsaI GTAC 5 cut(s) 436, 638, 708, 791, 906
RsaNI GTAC 5 cut(s) 435, 637, 707, 790, 905
RseI CAYNNNNRTG 1 cut(s) 1440
SacI GAGCTC 1 cut(s) 936
SaqAI TTAA 3 cut(s) 497, 521, 1413
SatI GCNGC 9 cut(s) 66, 266, 408, 516, 825, 978, 987, 990, 1483
Sau3AI GATC 6 cut(s) 56, 169, 531, 608, 849, 1062
ScaI AGTACT 2 cut(s) 638, 708
ScrFI CCNGG 3 cut(s) 186, 1275, 1479
SduI GDGCHC 6 cut(s) 655, 773, 936, 1079, 1323, 1422
SfaNI GCATC 3 cut(s) 245, 327, 1106
SfcI CTRYAG 3 cut(s) 309, 405, 540
SfoI GGCGCC 1 cut(s) 87
SfuI TTCGAA 2 cut(s) 17, 1256
SmiMI CAYNNNNRTG 1 cut(s) 1440
SsiI CCGC 4 cut(s) 811, 937, 978, 1222
SspDI GGCGCC 1 cut(s) 85
SspMI CTAG 8 cut(s) 26, 251, 458, 464, 606, 845, 993, 1070
SstI GAGCTC 1 cut(s) 936
StyD4I CCNGG 3 cut(s) 184, 1273, 1477
StyI CCWWGG 2 cut(s) 96, 1244
TaaI ACNGT 6 cut(s) 298, 310, 527, 544, 676, 1059
TaiI ACGT 3 cut(s) 120, 376, 1375
TaqI TCGA 5 cut(s) 17, 102, 227, 754, 1256
TatI WGTACW 3 cut(s) 636, 706, 904
TauI GCSGC 1 cut(s) 980
TfiI GAWTC 4 cut(s) 33, 686, 751, 996
Tru1I TTAA 3 cut(s) 497, 521, 1413
Tru9I TTAA 3 cut(s) 497, 521, 1413
TscAI CASTG 3 cut(s) 636, 791, 1123
TseI GCWGC 8 cut(s) 65, 265, 407, 515, 824, 986, 989, 1482
TspDTI ATGAA 8 cut(s) 70, 272, 606, 868, 1081, 1175, 1188, 1223
TspGWI ACGGA 1 cut(s) 1452
TspRI CASTG 3 cut(s) 636, 791, 1123
VneI GTGCAC 1 cut(s) 1075
XapI RAATTY 3 cut(s) 20, 1297, 1470
XbaI TCTAGA 1 cut(s) 25
XceI RCATGY 1 cut(s) 274
XcmI CCANNNNNNNNNTGG 1 cut(s) 1090
XmnI GAANNNNTTC 1 cut(s) 1269
XspI CTAG 8 cut(s) 26, 251, 458, 464, 606, 845, 993, 1070
ZraI GACGTC 1 cut(s) 374
ZrmI AGTACT 2 cut(s) 638, 708
Zsp2I ATGCAT 1 cut(s) 132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.