Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0005686

Physical Location & Seq

Genomic Coordinates Reverse (-)

17903262 .. 17911262

Gene Structure 8001 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G122100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1410 bp

ATGGCGCCCTACACTAAGGTTGAAGAAAGCTTCAATGTTCAGGCAATGCATGATATACTATATCATCGACATCACTTAGATAATTATGATCATTTGGAGTTCCCTGGAGTGGTTCCTCGCACTTTCCTTGGTGCATTGCTTGTATCAAGTTTGGCAGCTCCTTCTGTTTTAGCAATGGACTTGTTGCATGTATCAAAGATTTATAGTCTTTTTGCAGTTCGTTTGGCATTAGGTGGTGTCATATTATCTACATTACGTTTCTTTCGTCTTCAGGTTAGACATAAGTTTGGACTTCAAGTAGAAGCTTTCTTTGTTATATTAACTGCAGTTCAGTTCCACCTTTTGTTCTATTGTACTCGCCCACTTCCAAATGTACTAGCTCTGGGTGTAGTCAATTTGGCATATGGATATTGGTTAAAGGAGAAATGTTATGCAGCTATAAACTGTCTGATTTTTGCTACAGTTATCTTTAGATGTGATATTTTGTTACTTCTTTGCCCTCTTGGCTTGGAGCTTTTGTTGACTAGAAGAATTTCATTATGGAAGGCGTTGAAATGCTGCAGTTTGTGTGCTATATTATGCATAGGTCTTACTGTATTAGTAGATTCAATTATGTGGAAAAGGTTACTGTGGCCTGAATTTGAAGTTTTCTGGTTCAACTCTGTTCTGAATCGAAGTTCAGAGTGGGGTACACATCCGTTTCACTGGTACTTCACTTCAGCACTCCCTCGCTTGTTGCTTGCTGCATACCCTCTTTTTCTGCTTGGGGTCTTACTGGACAGAAGGATTTTGTTATTCATTCTTCCAGTCTTCTCCTTTGTTTTACTTTACTCTAAGCTTCCCCACAAGGAGCTTCGTTTTATCCTTAGCTCAGTTCCCATCTTCAACTTATCTGCTGCAATTGCTGCTACTAGAGTCTATAACAATAGGAAGAAGACTTATTGGAAGTTTCTCTATCCAATTATGCTCGGATTATTGTTGATCAGTCTAGGGTGCACCGTCATAACTTTCATGGCATCCAATGAGAATTATCCCAGTGGTCATGCTCTAAAACATTTGCATGAGACTCGTCAGTTTGCTAACCGTACAAATGAACTTTGGGTTCACATCGATACTTTTTCGGCCATGAATGGAATATCCCGCTTTTGTGAAAATAAGTTTCCATGGAGGTATTCTAAAGAAGAAGGGATTCCTCCAGAAGAATTATACCAGAGAAATTTCACCTATCTTATAAATGAGCATCCTGCCATCAATGGATTTAAGTGTCTATTAGCTGAAAATGGTTTCTCACGGGTTCGTTTAAGAACTGGCTTCCCACCTATTTTACTGGTTAAAGAGCCCAAGATTTATATTCATGGAAATGTAAGAAACAAAGATGTCATGCGTAGAAATTGGCCAGGCTGCTCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006464 GO:0006486 GO:0006487 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0012505 GO:0019538 GO:0019941 GO:0030163 GO:0030433 GO:0033554 GO:0034645 GO:0034976 GO:0036211 GO:0036503 GO:0042221 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051603 GO:0051716 GO:0070085 GO:0071704 GO:1901135 GO:1901137 GO:1901564 GO:1901565 GO:1901566 GO:1901575 GO:1901576 GO:1901698

KEGG Pathways

Metabolic & Signaling

ko00510 ko00513 ko01100 map00510 map00513 map01100

Pfam Domains

Protein Families

Glyco_transf_22

Protein Analysis

470

Amino Acids

54.23

Weight (kDa)

9.44

Isoelectric Point (pI)

42.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005686)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02145 AT1G02145 AT1G02145 AT1G02145
fragaria_vesca	FvH4_7g09360 FvH4_7g09360 FvH4_7g09360 FvH4_7g09360 FvH4_7g09360 FvH4_7g09360 FvH4_7g09360
malus_domestica	MD07G1098100.v1.1
prunus_persica	Prupe.2G122100_v2.0.a1
pyrus_communis	pycom07g08070
rosa_chinensis	RchiOBHm_Chr1g0346061
rosa_laevigata	RLG00000028817
rosa_multiflora	Rmu_sc0003809.1_g000018 Rmu_ssc0000255.1_g000074
rosa_roxburghii	Rroxscaffold_4G00308880
rosa_rugosa	Rorug01G0177600 Rorug01G0177700
rosa_samantha	Rh1AG197000 Rh1BG162300 Rh1CG181900 Rh1DG192900
rosa_wichuraiana	Rw0G001210 Rw1G016360 Rw1G016550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1232
AccB1I	GGYRCC	1 cut(s)	4
AciI	CCGC	1 cut(s)	1141
AcoI	YGGCCR	2 cut(s)	1122, 1394
AcsI	RAATTY	3 cut(s)	531, 638, 1216
AcuI	CTGAAG	2 cut(s)	254, 702
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	5 cut(s)	355, 375, 691, 710, 1087
AfiI	CCNNNNNNNGG	1 cut(s)	109
AgsI	TTSAA	8 cut(s)	23, 34, 296, 553, 609, 644, 658, 886
AjnI	CCWGG	2 cut(s)	103, 1396
Alw21I	GWGCWC	1 cut(s)	998
Alw26I	GTCTC	1 cut(s)	1058
Alw44I	GTGCAC	1 cut(s)	994
AoxI	GGCC	3 cut(s)	632, 1122, 1394
ApaLI	GTGCAC	1 cut(s)	994
ApeKI	GCWGC	7 cut(s)	155, 434, 558, 743, 896, 905, 1401
ApoI	RAATTY	3 cut(s)	531, 638, 1216
Asp700I	GAANNNNTTC	2 cut(s)	532, 1188
AspLEI	GCGC	1 cut(s)	7
AsuHPI	GGTGA	1 cut(s)	1213
BaeGI	GKGCMC	1 cut(s)	998
BalI	TGGCCA	1 cut(s)	1396
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	1 cut(s)	1341
BauI	CACGAG	1 cut(s)	1405
BbsI	GAAGAC	3 cut(s)	260, 802, 941
Bbv12I	GWGCWC	1 cut(s)	998
BbvI	GCAGC	7 cut(s)	167, 446, 545, 730, 883, 892, 1388
BccI	CCATC	2 cut(s)	887, 1256
BcgI	CGANNNNNNTGC	2 cut(s)	1049, 1083
BciT130I	CCWGG	2 cut(s)	105, 1398
BclI	TGATCA	2 cut(s)	88, 981
BcoDI	GTCTC	1 cut(s)	1058
BfaI	CTAG	4 cut(s)	377, 525, 912, 989
BfmI	CTRYAG	3 cut(s)	324, 459, 559
BfoI	RGCGCY	1 cut(s)	8
BglI	GCCNNNNNGGC	1 cut(s)	504
BisI	GCNGC	7 cut(s)	156, 435, 559, 744, 897, 906, 1402
BlsI	GCNGC	7 cut(s)	157, 436, 560, 745, 898, 907, 1403
Bme1390I	CCNGG	2 cut(s)	105, 1398
BmiI	GGNNCC	2 cut(s)	6, 114
BmrFI	CCNGG	2 cut(s)	105, 1398
BmrI	ACTGGG	1 cut(s)	1029
BmsI	GCATC	2 cut(s)	1025, 1249
BmuI	ACTGGG	1 cut(s)	1029
BpiI	GAAGAC	3 cut(s)	260, 802, 941
BpmI	CTGGAG	2 cut(s)	126, 1179
Bpu10I	CCTNAGC	1 cut(s)	866
Bsa29I	ATCGAT	1 cut(s)	1110
BsaHI	GRCGYC	1 cut(s)	5
BsaJI	CCNNGG	3 cut(s)	103, 127, 1163
BsaXI	ACNNNNNCTCC	2 cut(s)	503, 533
Bsc4I	CCNNNNNNNGG	1 cut(s)	109
Bse1I	ACTGG	6 cut(s)	710, 780, 806, 1035, 1312, 1332
Bse3DI	GCAATG	3 cut(s)	51, 134, 180
BseBI	CCWGG	2 cut(s)	105, 1398
BseCI	ATCGAT	1 cut(s)	1110
BseDI	CCNNGG	3 cut(s)	103, 127, 1163
BseGI	GGATG	3 cut(s)	694, 1016, 1240
BseLI	CCNNNNNNNGG	1 cut(s)	109
BseMI	GCAATG	3 cut(s)	51, 134, 180
BseMII	CTCAG	1 cut(s)	885
BseNI	ACTGG	6 cut(s)	710, 780, 806, 1035, 1312, 1332
BseSI	GKGCMC	1 cut(s)	998
BseXI	GCAGC	7 cut(s)	167, 446, 545, 730, 883, 892, 1388
BshFI	GGCC	3 cut(s)	634, 1124, 1396
BshNI	GGYRCC	1 cut(s)	4
BshVI	ATCGAT	1 cut(s)	1110
BsiHKAI	GWGCWC	1 cut(s)	998
BslI	CCNNNNNNNGG	1 cut(s)	109
BsmAI	GTCTC	1 cut(s)	1058
BsnI	GGCC	3 cut(s)	634, 1124, 1396
Bsp1286I	GDGCHC	2 cut(s)	998, 1341
Bsp143I	GATC	2 cut(s)	88, 981
Bsp19I	CCATGG	1 cut(s)	1163
BspACI	CCGC	1 cut(s)	1141
BspANI	GGCC	3 cut(s)	634, 1124, 1396
BspCNI	CTCAG	1 cut(s)	884
BspDI	ATCGAT	1 cut(s)	1110
BspLI	GGNNCC	2 cut(s)	6, 114
BspMAI	CTGCAG	2 cut(s)	328, 563
BspT107I	GGYRCC	1 cut(s)	4
BsrDI	GCAATG	3 cut(s)	51, 134, 180
BsrI	ACTGG	6 cut(s)	710, 780, 806, 1035, 1312, 1332
BssECI	CCNNGG	3 cut(s)	103, 127, 1163
BssMI	GATC	2 cut(s)	88, 981
BssNI	GRCGYC	1 cut(s)	5
BssSI	CACGAG	1 cut(s)	1405
BssT1I	CCWWGG	2 cut(s)	127, 1163
Bst2BI	CACGAG	1 cut(s)	1405
Bst2UI	CCWGG	2 cut(s)	105, 1398
Bst4CI	ACNGT	6 cut(s)	446, 463, 595, 630, 1000, 1085
BstACI	GRCGYC	1 cut(s)	5
BstAPI	GCANNNNNTGC	1 cut(s)	905
BstC8I	GCNNGC	1 cut(s)	741
BstDEI	CTNAG	5 cut(s)	15, 76, 834, 866, 871
BstDSI	CCRYGG	1 cut(s)	1163
BstF5I	GGATG	3 cut(s)	694, 1016, 1240
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	1 cut(s)	7
BstKTI	GATC	2 cut(s)	91, 984
BstMAI	GTCTC	1 cut(s)	1058
BstMBI	GATC	2 cut(s)	88, 981
BstMWI	GCNNNNNNNGC	3 cut(s)	504, 902, 905
BstNI	CCWGG	2 cut(s)	105, 1398
BstNSI	RCATGY	1 cut(s)	191
BstSCI	CCNGG	2 cut(s)	103, 1396
BstSFI	CTRYAG	3 cut(s)	324, 459, 559
BstSLI	GKGCMC	1 cut(s)	998
BstV1I	GCAGC	7 cut(s)	167, 446, 545, 730, 883, 892, 1388
BstV2I	GAAGAC	3 cut(s)	260, 802, 941
Bsu15I	ATCGAT	1 cut(s)	1110
BsuRI	GGCC	3 cut(s)	634, 1124, 1396
BsuTUI	ATCGAT	1 cut(s)	1110
BtgI	CCRYGG	1 cut(s)	1163
BtsCI	GGATG	3 cut(s)	694, 1016, 1240
BtsIMutI	CAGTG	2 cut(s)	703, 1042
Cac8I	GCNNGC	1 cut(s)	741
CfoI	GCGC	1 cut(s)	7
ClaI	ATCGAT	1 cut(s)	1110
Csp6I	GTAC	5 cut(s)	354, 374, 690, 709, 1086
CviAII	CATG	9 cut(s)	50, 188, 1012, 1043, 1061, 1126, 1164, 1355, 1381
CviQI	GTAC	5 cut(s)	354, 374, 690, 709, 1086
DdeI	CTNAG	5 cut(s)	15, 76, 834, 866, 871
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	2 cut(s)	90, 983
DpnII	GATC	2 cut(s)	88, 981
EaeI	YGGCCR	2 cut(s)	1122, 1394
Eco130I	CCWWGG	2 cut(s)	127, 1163
Eco24I	GRGCYC	1 cut(s)	1341
Eco57I	CTGAAG	2 cut(s)	254, 702
EcoRII	CCWGG	2 cut(s)	103, 1396
EcoT14I	CCWWGG	2 cut(s)	127, 1163
EcoT22I	ATGCAT	2 cut(s)	51, 584
EcoT38I	GRGCYC	1 cut(s)	1341
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	2 cut(s)	127, 1163
FaeI	CATG	9 cut(s)	53, 191, 1015, 1046, 1064, 1129, 1167, 1358, 1384
FatI	CATG	9 cut(s)	49, 187, 1011, 1042, 1060, 1125, 1163, 1354, 1380
FauI	CCCGC	1 cut(s)	1148
FauNDI	CATATG	1 cut(s)	403
FbaI	TGATCA	2 cut(s)	88, 981
Fnu4HI	GCNGC	7 cut(s)	156, 435, 559, 744, 897, 906, 1402
FokI	GGATG	3 cut(s)	681, 1003, 1227
FriOI	GRGCYC	1 cut(s)	1341
Fsp4HI	GCNGC	7 cut(s)	156, 435, 559, 744, 897, 906, 1402
FspBI	CTAG	4 cut(s)	377, 525, 912, 989
GlaI	GCGC	1 cut(s)	6
GluI	GCNGC	7 cut(s)	156, 435, 559, 744, 897, 906, 1402
GsuI	CTGGAG	2 cut(s)	126, 1179
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	3 cut(s)	634, 1124, 1396
HhaI	GCGC	1 cut(s)	7
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	9 cut(s)	53, 191, 1015, 1046, 1064, 1129, 1167, 1358, 1384
Hin6I	GCGC	1 cut(s)	5
HinP1I	GCGC	1 cut(s)	5
HincII	GTYRAC	1 cut(s)	522
HindII	GTYRAC	1 cut(s)	522
HindIII	AAGCTT	3 cut(s)	28, 303, 836
HinfI	GANTC	5 cut(s)	605, 670, 915, 1066, 1189
HphI	GGTGA	1 cut(s)	1213
Hpy166II	GTNNAC	4 cut(s)	522, 692, 996, 1105
Hpy188I	TCNGA	4 cut(s)	450, 669, 682, 971
Hpy188III	TCNNGA	2 cut(s)	1196, 1407
Hpy8I	GTNNAC	4 cut(s)	522, 692, 996, 1105
HpyAV	CCTTC	4 cut(s)	171, 538, 777, 1178
HpyCH4III	ACNGT	6 cut(s)	446, 463, 595, 630, 1000, 1085
HpyCH4IV	ACGT	1 cut(s)	256
HpyF10VI	GCNNNNNNNGC	3 cut(s)	504, 902, 905
HpyF3I	CTNAG	5 cut(s)	15, 76, 834, 866, 871
HpySE526I	ACGT	1 cut(s)	256
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	9 cut(s)	53, 191, 1015, 1046, 1064, 1129, 1167, 1358, 1384
HspAI	GCGC	1 cut(s)	5
KasI	GGCGCC	1 cut(s)	4
Ksp22I	TGATCA	2 cut(s)	88, 981
Kzo9I	GATC	2 cut(s)	88, 981
LmnI	GCTCC	3 cut(s)	163, 511, 850
Lsp1109I	GCAGC	7 cut(s)	167, 446, 545, 730, 883, 892, 1388
LweI	GCATC	2 cut(s)	1025, 1249
MaeI	CTAG	4 cut(s)	377, 525, 912, 989
MaeII	ACGT	1 cut(s)	256
MaeIII	GTNAC	2 cut(s)	486, 624
MalI	GATC	2 cut(s)	90, 983
MboI	GATC	2 cut(s)	88, 981
MfeI	CAATTG	1 cut(s)	900
MhlI	GDGCHC	2 cut(s)	998, 1341
MlsI	TGGCCA	1 cut(s)	1396
MluNI	TGGCCA	1 cut(s)	1396
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	2 cut(s)	924, 1060
MnlI	CCTC	6 cut(s)	126, 510, 738, 762, 1161, 1203
Mox20I	TGGCCA	1 cut(s)	1396
Mph1103I	ATGCAT	2 cut(s)	51, 584
MroXI	GAANNNNTTC	2 cut(s)	532, 1188
MscI	TGGCCA	1 cut(s)	1396
MseI	TTAA	5 cut(s)	320, 416, 1260, 1301, 1332
MslI	CAYNNNNRTG	2 cut(s)	1059, 1359
Msp20I	TGGCCA	1 cut(s)	1396
MspR9I	CCNGG	2 cut(s)	105, 1398
MunI	CAATTG	1 cut(s)	900
MvaI	CCWGG	2 cut(s)	105, 1398
MwoI	GCNNNNNNNGC	3 cut(s)	504, 902, 905
NarI	GGCGCC	1 cut(s)	5
NcoI	CCATGG	1 cut(s)	1163
NdeI	CATATG	1 cut(s)	403
NdeII	GATC	2 cut(s)	88, 981
NlaIII	CATG	9 cut(s)	53, 191, 1015, 1046, 1064, 1129, 1167, 1358, 1384
NlaIV	GGNNCC	2 cut(s)	6, 114
NsiI	ATGCAT	2 cut(s)	51, 584
NspI	RCATGY	1 cut(s)	191
PcsI	WCGNNNNNNNCGW	1 cut(s)	262
PdmI	GAANNNNTTC	2 cut(s)	532, 1188
PfeI	GAWTC	3 cut(s)	605, 670, 1189
PkrI	GCNGC	7 cut(s)	157, 436, 560, 745, 898, 907, 1403
PleI	GAGTC	2 cut(s)	923, 1060
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	2 cut(s)	923, 1060
PsiI	TTATAA	1 cut(s)	1232
Psp6I	CCWGG	2 cut(s)	103, 1396
PspGI	CCWGG	2 cut(s)	103, 1396
PspN4I	GGNNCC	2 cut(s)	6, 114
PstI	CTGCAG	2 cut(s)	328, 563
RsaI	GTAC	5 cut(s)	355, 375, 691, 710, 1087
RsaNI	GTAC	5 cut(s)	354, 374, 690, 709, 1086
RseI	CAYNNNNRTG	2 cut(s)	1059, 1359
SaqAI	TTAA	5 cut(s)	320, 416, 1260, 1301, 1332
SatI	GCNGC	7 cut(s)	156, 435, 559, 744, 897, 906, 1402
Sau3AI	GATC	2 cut(s)	88, 981
SchI	GAGTC	2 cut(s)	924, 1060
ScrFI	CCNGG	2 cut(s)	105, 1398
SduI	GDGCHC	2 cut(s)	998, 1341
SfaNI	GCATC	2 cut(s)	1025, 1249
SfcI	CTRYAG	3 cut(s)	324, 459, 559
SfoI	GGCGCC	1 cut(s)	6
SmiMI	CAYNNNNRTG	2 cut(s)	1059, 1359
SsiI	CCGC	1 cut(s)	1141
SspDI	GGCGCC	1 cut(s)	4
SspMI	CTAG	4 cut(s)	377, 525, 912, 989
StyD4I	CCNGG	2 cut(s)	103, 1396
StyI	CCWWGG	2 cut(s)	127, 1163
TaaI	ACNGT	6 cut(s)	446, 463, 595, 630, 1000, 1085
TaiI	ACGT	1 cut(s)	259
TaqI	TCGA	3 cut(s)	67, 673, 1110
TatI	WGTACW	2 cut(s)	353, 373
TfiI	GAWTC	3 cut(s)	605, 670, 1189
Tru1I	TTAA	5 cut(s)	320, 416, 1260, 1301, 1332
Tru9I	TTAA	5 cut(s)	320, 416, 1260, 1301, 1332
TscAI	CASTG	2 cut(s)	710, 1042
TseI	GCWGC	7 cut(s)	155, 434, 558, 743, 896, 905, 1401
TspDTI	ATGAA	6 cut(s)	525, 787, 1000, 1107, 1142, 1343
TspGWI	ACGGA	1 cut(s)	687
TspRI	CASTG	2 cut(s)	710, 1042
VneI	GTGCAC	1 cut(s)	994
XapI	RAATTY	3 cut(s)	531, 638, 1216
XceI	RCATGY	1 cut(s)	191
XmnI	GAANNNNTTC	2 cut(s)	532, 1188
XspI	CTAG	4 cut(s)	377, 525, 912, 989
Zsp2I	ATGCAT	2 cut(s)	51, 584

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.