RLG00000028817
NAC Family

dol-P-Man Man(7)GlcNAc(2)-PP-Dol

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
28474861 .. 28482997
8137 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028817

Sequence Viewer

Length: 1491 bp
ATGGCTTCCAAGGCTTCGAAATTTCTAGAGCGATTTGGTTACGATGTGGTACTGGGATCAATAGCTGCGTTTTACGTCTTCATGGCGCCTTACACTAAGGTTGAAGAAAGCTTCAACGTTCAGGCAATGCATGATATTCTATATCATCGACAAAACTTGGATAATTATGATCATTTGGAGTTCCCCGGAGTTGTTCCTCGCACGTTCATCGGTGCTTTGCTTGTATCAAGTTTGGCATCCCCTGCTGTTCTAGCAATGAACTTGCTGCACATGCCAAAGATTTATGGTCTTCTTACAGTTCGTTTGACATTAAGTTGCATCATATTATCTACATTACGCTTCTTTCGTCTTCAGGTTAGAGAAAAATTTGGACGTCAAGTAGAAGCTTTCTTTGTAATACTGACTGCAGCTCAGTTCCACCTTCTGTTCTATTGTACCCGTCCACTTCCAAATATACTAGCTCTAGGTGCAGTCAACTTGGCATATGGATATTGGTTAAAGGAGAAGTGTTATGCAGCTTTAAACTGTCTGATCTTTGCTACAGTTATCCTAAGATGTGATATTTTGTTGCTTCTCTGTCCTGTTGGCTTGGAGCTTTTGTTGACTAGATCAATTTCGTTATGGAAGGCATTGAAGTGCTGCACTTTGTGTGCTCTATTATGCATAGGTCTTACTGTATTTGTAGATTCAATAATGTGGAAAAGATTACTTTGGCCTGAATTTGAAGTTTTCTGGTTCAACTCTGTTCTAAATCGTAGTTCAGAGTGGGGCACACATCCATTTTACTGGTACTTCACTTCAGCACTTCCCCGCTCATTGCTTGCTGCATACCCCCTTTTCCTGCTAGGGATCTTACTTGACAGAAGAGTTTTGCCATTCGTTATTCCAGTGCTGTCCTTTGTTTTATTATACTCTAAGCTTCCCCATAAGGAGCTCCGCTTCATCATTAATTCAATTCCAATCTTCAATTTATCTGCTGCAATTGCAGCTACTAGAATCTATAACAATAGAAAAAAGACATTCTGGAACTTTCTTTATTTAATTATGCTCGGATTACTGTTGATCAGTCTAGGGTGCACGGCCATAACTTTTATGGCGTCCAATGAGAATTATCCGAGTGGTCATGCTTTAAAACATTTGCATGAGATTGGTCATCTTGGGAACAGAACAAATGAAATTTTGGTTCATATTGATACCTTTTCAGCCATGAATGGAATATCCCGCTTTTGTGAACATGATTTTCCATGGAGGTATTCTAAAGAGGAAGAGATTCGGGTGGAAGAATTATGCCAGAGAAATTTCAACTATCTTATCAATGAGCATCCTGCAATCAATGGATTCAAGTGTCTATCCAGTATAAATGGGTTTTCACGTGTTCGTCTTCAAATTGGCTTCCCACCAATTTTACTGGTTAAAGAGCCCAAAGTATTTATTCATGGAAATGTAAAACACAGCGATGTCCTCAACGGAATTTGGCCGGGCTGCTCCTGA

Protein Analysis

497

Amino Acids

56.81

Weight (kDa)

9.06

Isoelectric Point (pI)

43.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_22 PF03901 25 - 358 8.4e-53 Alg9-like mannosyltransferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 376
AccB1I GGYRCC 1 cut(s) 85
AccBSI CCGCTC 1 cut(s) 813
AciI CCGC 3 cut(s) 811, 937, 1222
AclI AACGTT 1 cut(s) 117
AclWI GGATC 2 cut(s) 64, 857
AcoI YGGCCR 2 cut(s) 1080, 1475
AcsI RAATTY 6 cut(s) 20, 365, 719, 1176, 1297, 1470
AcuI CTGAAG 2 cut(s) 335, 783
AcvI CACGTG 1 cut(s) 1373
AcyI GRCGYC 3 cut(s) 86, 373, 1097
AdeI CACNNNGTG 1 cut(s) 648
AfaI GTAC 3 cut(s) 51, 436, 791
AflIII ACRYGT 1 cut(s) 1372
Alw21I GWGCWC 3 cut(s) 655, 936, 1079
Alw44I GTGCAC 1 cut(s) 1075
AlwI GGATC 2 cut(s) 64, 857
AoxI GGCC 3 cut(s) 713, 1080, 1475
ApaLI GTGCAC 1 cut(s) 1075
ApeKI GCWGC 9 cut(s) 65, 265, 407, 515, 639, 824, 977, 986, 1482
ApoI RAATTY 6 cut(s) 20, 365, 719, 1176, 1297, 1470
AseI ATTAAT 1 cut(s) 948
Asp700I GAANNNNTTC 1 cut(s) 1269
AspLEI GCGC 1 cut(s) 88
AsuC2I CCSGG 2 cut(s) 186, 1479
AsuII TTCGAA 1 cut(s) 17
BaeGI GKGCMC 2 cut(s) 773, 1079
BanI GGYRCC 1 cut(s) 85
BanII GRGCYC 2 cut(s) 936, 1422
BbrPI CACGTG 1 cut(s) 1373
BbsI GAAGAC 4 cut(s) 70, 281, 341, 1373
Bbv12I GWGCWC 3 cut(s) 655, 936, 1079
BbvI GCAGC 9 cut(s) 52, 252, 419, 527, 626, 811, 964, 998, 1469
BceAI ACGGC 1 cut(s) 1095
BcgI CGANNNNNNTGC 2 cut(s) 190, 224
BclI TGATCA 2 cut(s) 169, 1062
BcnI CCSGG 2 cut(s) 186, 1479
BfaI CTAG 8 cut(s) 26, 251, 458, 464, 606, 845, 993, 1070
BfmI CTRYAG 2 cut(s) 405, 540
BfoI RGCGCY 1 cut(s) 89
BisI GCNGC 9 cut(s) 66, 266, 408, 516, 640, 825, 978, 987, 1483
BlsI GCNGC 9 cut(s) 67, 267, 409, 517, 641, 826, 979, 988, 1484
Bme1390I CCNGG 2 cut(s) 186, 1479
BmiI GGNNCC 1 cut(s) 87
BmrFI CCNGG 2 cut(s) 186, 1479
BmrI ACTGGG 1 cut(s) 62
BmsI GCATC 3 cut(s) 245, 327, 1330
BmuI ACTGGG 1 cut(s) 62
BpiI GAAGAC 4 cut(s) 70, 281, 341, 1373
Bpu14I TTCGAA 1 cut(s) 17
BpuMI CCSGG 2 cut(s) 186, 1479
BsaAI YACGTR 1 cut(s) 1373
BsaHI GRCGYC 3 cut(s) 86, 373, 1097
BsaJI CCNNGG 3 cut(s) 9, 184, 1244
BsaXI ACNNNNNCTCC 2 cut(s) 584, 614
Bse1I ACTGG 5 cut(s) 57, 791, 887, 1353, 1413
Bse3DI GCAATG 3 cut(s) 132, 261, 815
BseDI CCNNGG 3 cut(s) 9, 184, 1244
BseGI GGATG 3 cut(s) 236, 775, 1321
BseMI GCAATG 3 cut(s) 132, 261, 815
BseMII CTCAG 1 cut(s) 425
BseNI ACTGG 5 cut(s) 57, 791, 887, 1353, 1413
BseSI GKGCMC 2 cut(s) 773, 1079
BseXI GCAGC 9 cut(s) 52, 252, 419, 527, 626, 811, 964, 998, 1469
BsgI GTGCAG 3 cut(s) 251, 489, 625
BshFI GGCC 3 cut(s) 715, 1082, 1477
BshNI GGYRCC 1 cut(s) 85
BsiHKAI GWGCWC 3 cut(s) 655, 936, 1079
BsiSI CCGG 2 cut(s) 186, 1478
BsnI GGCC 3 cut(s) 715, 1082, 1477
Bsp119I TTCGAA 1 cut(s) 17
Bsp1286I GDGCHC 5 cut(s) 655, 773, 936, 1079, 1422
Bsp143I GATC 6 cut(s) 56, 169, 531, 608, 849, 1062
Bsp19I CCATGG 1 cut(s) 1244
BspACI CCGC 3 cut(s) 811, 937, 1222
BspANI GGCC 3 cut(s) 715, 1082, 1477
BspCNI CTCAG 1 cut(s) 424
BspLI GGNNCC 1 cut(s) 87
BspMAI CTGCAG 1 cut(s) 409
BspPI GGATC 2 cut(s) 64, 857
BspT104I TTCGAA 1 cut(s) 17
BspT107I GGYRCC 1 cut(s) 85
BsrBI CCGCTC 1 cut(s) 813
BsrDI GCAATG 3 cut(s) 132, 261, 815
BsrI ACTGG 5 cut(s) 57, 791, 887, 1353, 1413
BssECI CCNNGG 3 cut(s) 9, 184, 1244
BssMI GATC 6 cut(s) 56, 169, 531, 608, 849, 1062
BssNI GRCGYC 3 cut(s) 86, 373, 1097
BssT1I CCWWGG 2 cut(s) 9, 1244
Bst4CI ACNGT 5 cut(s) 298, 527, 544, 676, 1059
Bst6I CTCTTC 2 cut(s) 859, 1260
BstACI GRCGYC 3 cut(s) 86, 373, 1097
BstAPI GCANNNNNTGC 1 cut(s) 242
BstBAI YACGTR 1 cut(s) 1373
BstBI TTCGAA 1 cut(s) 17
BstC8I GCNNGC 1 cut(s) 822
BstDEI CTNAG 4 cut(s) 96, 411, 551, 915
BstDSI CCRYGG 1 cut(s) 1244
BstF5I GGATG 3 cut(s) 236, 775, 1321
BstH2I RGCGCY 1 cut(s) 89
BstHHI GCGC 1 cut(s) 88
BstKTI GATC 6 cut(s) 59, 172, 534, 611, 852, 1065
BstMBI GATC 6 cut(s) 56, 169, 531, 608, 849, 1062
BstMWI GCNNNNNNNGC 7 cut(s) 11, 242, 251, 271, 467, 983, 986
BstNSI RCATGY 1 cut(s) 274
BstSCI CCNGG 2 cut(s) 184, 1477
BstSFI CTRYAG 2 cut(s) 405, 540
BstSLI GKGCMC 2 cut(s) 773, 1079
BstV1I GCAGC 9 cut(s) 52, 252, 419, 527, 626, 811, 964, 998, 1469
BstV2I GAAGAC 4 cut(s) 70, 281, 341, 1373
BstX2I RGATCY 1 cut(s) 849
BstXI CCANNNNNNTGG 1 cut(s) 786
BstYI RGATCY 1 cut(s) 849
BsuRI GGCC 3 cut(s) 715, 1082, 1477
BtgI CCRYGG 1 cut(s) 1244
BtgZI GCGATG 1 cut(s) 1470
BtsCI GGATG 3 cut(s) 236, 775, 1321
BtsIMutI CAGTG 1 cut(s) 894
Cac8I GCNNGC 1 cut(s) 822
CfoI GCGC 1 cut(s) 88
CseI GACGC 1 cut(s) 1086
Csp6I GTAC 3 cut(s) 50, 435, 790
CviAII CATG 9 cut(s) 82, 131, 271, 1124, 1142, 1207, 1235, 1245, 1436
CviQI GTAC 3 cut(s) 50, 435, 790
DdeI CTNAG 4 cut(s) 96, 411, 551, 915
DinI GGCGCC 1 cut(s) 87
DpnI GATC 6 cut(s) 58, 171, 533, 610, 851, 1064
DpnII GATC 6 cut(s) 56, 169, 531, 608, 849, 1062
DraI TTTAAA 2 cut(s) 522, 1131
DraIII CACNNNGTG 1 cut(s) 648
EaeI YGGCCR 2 cut(s) 1080, 1475
Eam1104I CTCTTC 2 cut(s) 859, 1260
EarI CTCTTC 2 cut(s) 859, 1260
Ecl136II GAGCTC 1 cut(s) 934
Eco130I CCWWGG 2 cut(s) 9, 1244
Eco24I GRGCYC 2 cut(s) 936, 1422
Eco53kI GAGCTC 1 cut(s) 934
Eco57I CTGAAG 2 cut(s) 335, 783
Eco72I CACGTG 1 cut(s) 1373
EcoICRI GAGCTC 1 cut(s) 934
EcoT14I CCWWGG 2 cut(s) 9, 1244
EcoT22I ATGCAT 2 cut(s) 132, 665
EcoT38I GRGCYC 2 cut(s) 936, 1422
EgeI GGCGCC 1 cut(s) 87
EheI GGCGCC 1 cut(s) 87
ErhI CCWWGG 2 cut(s) 9, 1244
FaeI CATG 9 cut(s) 85, 134, 274, 1127, 1145, 1210, 1238, 1248, 1439
FatI CATG 9 cut(s) 81, 130, 270, 1123, 1141, 1206, 1234, 1244, 1435
FauI CCCGC 2 cut(s) 818, 1229
FauNDI CATATG 1 cut(s) 484
FbaI TGATCA 2 cut(s) 169, 1062
Fnu4HI GCNGC 9 cut(s) 66, 266, 408, 516, 640, 825, 978, 987, 1483
FokI GGATG 3 cut(s) 223, 762, 1308
FriOI GRGCYC 2 cut(s) 936, 1422
Fsp4HI GCNGC 9 cut(s) 66, 266, 408, 516, 640, 825, 978, 987, 1483
FspBI CTAG 8 cut(s) 26, 251, 458, 464, 606, 845, 993, 1070
GlaI GCGC 1 cut(s) 87
GluI GCNGC 9 cut(s) 66, 266, 408, 516, 640, 825, 978, 987, 1483
HaeII RGCGCY 1 cut(s) 89
HaeIII GGCC 3 cut(s) 715, 1082, 1477
HapII CCGG 2 cut(s) 186, 1478
HgaI GACGC 1 cut(s) 1086
HhaI GCGC 1 cut(s) 88
Hin1I GRCGYC 3 cut(s) 86, 373, 1097
Hin1II CATG 9 cut(s) 85, 134, 274, 1127, 1145, 1210, 1238, 1248, 1439
Hin6I GCGC 1 cut(s) 86
HinP1I GCGC 1 cut(s) 86
HincII GTYRAC 2 cut(s) 475, 603
HindII GTYRAC 2 cut(s) 475, 603
HindIII AAGCTT 3 cut(s) 109, 384, 917
HinfI GANTC 4 cut(s) 686, 996, 1270, 1338
HpaII CCGG 2 cut(s) 186, 1478
Hpy166II GTNNAC 5 cut(s) 443, 475, 603, 1077, 1232
Hpy188I TCNGA 4 cut(s) 531, 763, 1052, 1116
Hpy188III TCNNGA 3 cut(s) 26, 1024, 1488
Hpy8I GTNNAC 5 cut(s) 443, 475, 603, 1077, 1232
HpyAV CCTTC 2 cut(s) 431, 619
HpyCH4III ACNGT 5 cut(s) 298, 527, 544, 676, 1059
HpyCH4IV ACGT 5 cut(s) 75, 117, 203, 373, 1372
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 242, 251, 271, 467, 983, 986
HpyF3I CTNAG 4 cut(s) 96, 411, 551, 915
HpySE526I ACGT 5 cut(s) 75, 117, 203, 373, 1372
Hsp92I GRCGYC 3 cut(s) 86, 373, 1097
Hsp92II CATG 9 cut(s) 85, 134, 274, 1127, 1145, 1210, 1238, 1248, 1439
HspAI GCGC 1 cut(s) 86
KasI GGCGCC 1 cut(s) 85
Ksp22I TGATCA 2 cut(s) 169, 1062
Kzo9I GATC 6 cut(s) 56, 169, 531, 608, 849, 1062
LmnI GCTCC 4 cut(s) 592, 931, 939, 1490
Lsp1109I GCAGC 9 cut(s) 52, 252, 419, 527, 626, 811, 964, 998, 1469
LweI GCATC 3 cut(s) 245, 327, 1330
MaeI CTAG 8 cut(s) 26, 251, 458, 464, 606, 845, 993, 1070
MaeII ACGT 5 cut(s) 75, 117, 203, 373, 1372
MaeIII GTNAC 1 cut(s) 38
MalI GATC 6 cut(s) 58, 171, 533, 610, 851, 1064
MbiI CCGCTC 1 cut(s) 813
MboI GATC 6 cut(s) 56, 169, 531, 608, 849, 1062
MboII GAAGA 9 cut(s) 70, 116, 281, 341, 876, 955, 1277, 1292, 1373
MfeI CAATTG 1 cut(s) 981
MflI RGATCY 1 cut(s) 849
MhlI GDGCHC 5 cut(s) 655, 773, 936, 1079, 1422
Mly113I GGCGCC 1 cut(s) 86
MnlI CCTC 4 cut(s) 207, 1242, 1255, 1472
Mph1103I ATGCAT 2 cut(s) 132, 665
MroXI GAANNNNTTC 1 cut(s) 1269
MseI TTAA 7 cut(s) 311, 497, 521, 948, 1040, 1130, 1413
MslI CAYNNNNRTG 4 cut(s) 634, 1140, 1440, 1455
MspI CCGG 2 cut(s) 186, 1478
MspR9I CCNGG 2 cut(s) 186, 1479
MunI CAATTG 1 cut(s) 981
MwoI GCNNNNNNNGC 7 cut(s) 11, 242, 251, 271, 467, 983, 986
NarI GGCGCC 1 cut(s) 86
NciI CCSGG 2 cut(s) 186, 1479
NcoI CCATGG 1 cut(s) 1244
NdeI CATATG 1 cut(s) 484
NdeII GATC 6 cut(s) 56, 169, 531, 608, 849, 1062
NlaIII CATG 9 cut(s) 85, 134, 274, 1127, 1145, 1210, 1238, 1248, 1439
NlaIV GGNNCC 1 cut(s) 87
NsiI ATGCAT 2 cut(s) 132, 665
NspI RCATGY 1 cut(s) 274
NspV TTCGAA 1 cut(s) 17
PcsI WCGNNNNNNNCGW 1 cut(s) 343
PdmI GAANNNNTTC 1 cut(s) 1269
PfeI GAWTC 4 cut(s) 686, 996, 1270, 1338
PkrI GCNGC 9 cut(s) 67, 267, 409, 517, 641, 826, 979, 988, 1484
PluTI GGCGCC 1 cut(s) 89
PmaCI CACGTG 1 cut(s) 1373
PmlI CACGTG 1 cut(s) 1373
Ppu21I YACGTR 1 cut(s) 1373
PshBI ATTAAT 1 cut(s) 948
Psp124BI GAGCTC 1 cut(s) 936
Psp1406I AACGTT 1 cut(s) 117
PspCI CACGTG 1 cut(s) 1373
PspN4I GGNNCC 1 cut(s) 87
PstI CTGCAG 1 cut(s) 409
PsuI RGATCY 1 cut(s) 849
RsaI GTAC 3 cut(s) 51, 436, 791
RsaNI GTAC 3 cut(s) 50, 435, 790
RseI CAYNNNNRTG 4 cut(s) 634, 1140, 1440, 1455
SacI GAGCTC 1 cut(s) 936
SaqAI TTAA 7 cut(s) 311, 497, 521, 948, 1040, 1130, 1413
SatI GCNGC 9 cut(s) 66, 266, 408, 516, 640, 825, 978, 987, 1483
Sau3AI GATC 6 cut(s) 56, 169, 531, 608, 849, 1062
ScrFI CCNGG 2 cut(s) 186, 1479
SduI GDGCHC 5 cut(s) 655, 773, 936, 1079, 1422
SfaNI GCATC 3 cut(s) 245, 327, 1330
SfcI CTRYAG 2 cut(s) 405, 540
SfoI GGCGCC 1 cut(s) 87
SfuI TTCGAA 1 cut(s) 17
SmiMI CAYNNNNRTG 4 cut(s) 634, 1140, 1440, 1455
SsiI CCGC 3 cut(s) 811, 937, 1222
SspDI GGCGCC 1 cut(s) 85
SspMI CTAG 8 cut(s) 26, 251, 458, 464, 606, 845, 993, 1070
SstI GAGCTC 1 cut(s) 936
StyD4I CCNGG 2 cut(s) 184, 1477
StyI CCWWGG 2 cut(s) 9, 1244
TaaI ACNGT 5 cut(s) 298, 527, 544, 676, 1059
TaiI ACGT 5 cut(s) 78, 120, 206, 376, 1375
TaqI TCGA 2 cut(s) 17, 148
TfiI GAWTC 4 cut(s) 686, 996, 1270, 1338
Tru1I TTAA 7 cut(s) 311, 497, 521, 948, 1040, 1130, 1413
Tru9I TTAA 7 cut(s) 311, 497, 521, 948, 1040, 1130, 1413
TscAI CASTG 1 cut(s) 894
TseI GCWGC 9 cut(s) 65, 265, 407, 515, 639, 824, 977, 986, 1482
TspDTI ATGAA 8 cut(s) 70, 196, 272, 931, 1175, 1188, 1223, 1424
TspGWI ACGGA 1 cut(s) 1482
TspRI CASTG 1 cut(s) 894
VneI GTGCAC 1 cut(s) 1075
VspI ATTAAT 1 cut(s) 948
XapI RAATTY 6 cut(s) 20, 365, 719, 1176, 1297, 1470
XbaI TCTAGA 1 cut(s) 25
XceI RCATGY 1 cut(s) 274
XcmI CCANNNNNNNNNTGG 1 cut(s) 1090
XmnI GAANNNNTTC 1 cut(s) 1269
XspI CTAG 8 cut(s) 26, 251, 458, 464, 606, 845, 993, 1070
ZraI GACGTC 1 cut(s) 374
Zsp2I ATGCAT 2 cut(s) 132, 665
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.