MD07G1098100.v1.1
NAC Family

dol-P-Man Man(7)GlcNAc(2)-PP-Dol

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
10845664 .. 10851882
6219 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1098100.v1.1.491

Sequence Viewer

Length: 1320 bp
ATGGCTTCCAAGTCTTCCAATTTTCTTGAGCGCCATGGTTACGATTTGGTACTTGGATCGATAGCTGCGTTTTATGTGTTCATGGCGCCCTACACTAAGGTTGAAGAAAGCTTCAATGTCCAGGCAATGCATGACATTCTGTATTATCGAAATCGCATAGATAATTATGATCATCTGGAGTTCCCTGGAGTCGTTCCTCGCACTTTTCTGGGTGCATTGTTTGTTTCAAGTTTGGCATCTCCTTCTGTTTTAGCAATGGAACTGTTGCATTTGCCAAAGGTTTATAGTCTTTTAGCAGTTCGTTTGGCATTAGGTGGCATCATATTATCTACATTATGCTTCTTTCGCCTTCAGGTTAGACATAAGTTTGGACGTCAAGTGGAAGCTTTCTTTGTGATACTAACTGCAGTTCAGTTCCACCTTTTGTTCTATTGTACTCGTCCACTTCCAAATATACTAGCTCTGGGCGTAGTCAATTTGGCGTATGGGTATTGGTTAAAGGAGAAATATTATGCAGCCATAAACTGCCTGATTTTTGCTACGGTTATCTTTAGATGTGATATTTTGTTACTTCTTGGCCCTCTTGGCCTGGAGCTTTTGTTGACTAAAAGAATTTCATTATGGAAGACGTTTAAATGCTGCAGTTTGTGTGCTGTATTGTGCGTAGGCCTTACTGTTATAGTAGATTCAATTATGTGGAAAAGGTTACTGTGGCCCGAATTTGAAGTTTTCTGGTTCAACTCTGTGCTCAATAGAAGTTCAGAGTGGGGTATACATCCGTTTTACTGGTATTTCACTTCAGCACTCCCGCGGTCATTGCTTGCTGCATACCCTCTTTTTCTGCTTGGGGTCTTACTTGAGAGGAGGGTTTTGTTATTCGTTCTTCCAGCCTTGTCCTTTGTTTTACTTTACTCTAAGCTTCCCCACAAGGAGCTTCGTTTTATAATTAGCTCAGTTCCCATGTTCAACTTATCTGCTGCAATTGCTGCAACTAGAATCTATAACAATAGGAAGAAGACTTTCTGGAACTTGCTTTATCCAGTGATGCTTGGATTATTGTTGATCAGTCTAGGGTGCACTGTCATAAGTTTCATGGCTTCCAATGAAAATTATCCCAGTGGTCATGCTTTAAAACATTTGCATCAGACTGGCCATCTTGCGAACAGTTCAAATGAACATTGGGTTCACATTGATACGTTTTCTGCCATGAATGGAATATCCCGCTTCTGTGAAAATAATTTCCCATGGAGGTATTCTAAAGAAGAAGGGATTCCTCCCGAAGAGCTACACCGCAGAAATTTCACCTATCTTATAAAGTGA

Protein Analysis

440

Amino Acids

50.5

Weight (kDa)

9.24

Isoelectric Point (pI)

43.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_22 PF03901 25 - 400 1.9e-53 Alg9-like mannosyltransferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 944, 1313
AatII GACGTC 1 cut(s) 376
AccB1I GGYRCC 1 cut(s) 85
AccI GTMKAC 1 cut(s) 772
AccII CGCG 1 cut(s) 811
AciI CCGC 4 cut(s) 809, 811, 1222, 1291
AclWI GGATC 1 cut(s) 64
AcoI YGGCCR 1 cut(s) 1150
AcsI RAATTY 3 cut(s) 612, 719, 1297
AcuI CTGAAG 2 cut(s) 335, 783
AcyI GRCGYC 2 cut(s) 86, 373
AfaI GTAC 2 cut(s) 51, 436
AgsI TTSAA 8 cut(s) 104, 115, 228, 690, 725, 739, 967, 1170
AjnI CCWGG 3 cut(s) 120, 184, 588
AluBI AGCT 9 cut(s) 65, 111, 386, 461, 595, 919, 934, 951, 1285
AluI AGCT 9 cut(s) 65, 111, 386, 461, 595, 919, 934, 951, 1285
Alw21I GWGCWC 2 cut(s) 750, 1079
Alw44I GTGCAC 1 cut(s) 1075
AlwI GGATC 1 cut(s) 64
AoxI GGCC 5 cut(s) 577, 586, 667, 713, 1150
ApaLI GTGCAC 1 cut(s) 1075
ApeKI GCWGC 6 cut(s) 65, 515, 639, 824, 977, 986
ApoI RAATTY 3 cut(s) 612, 719, 1297
Asp700I GAANNNNTTC 2 cut(s) 1019, 1269
AspLEI GCGC 2 cut(s) 33, 88
AspS9I GGNCC 2 cut(s) 578, 714
AsuHPI GGTGA 1 cut(s) 1294
BaeGI GKGCMC 1 cut(s) 1079
BalI TGGCCA 1 cut(s) 1152
BanI GGYRCC 1 cut(s) 85
BbsI GAAGAC 3 cut(s) 6, 632, 1022
Bbv12I GWGCWC 2 cut(s) 750, 1079
BbvI GCAGC 6 cut(s) 52, 527, 626, 811, 964, 973
BccI CCATC 1 cut(s) 1161
BciT130I CCWGG 3 cut(s) 122, 186, 590
BclI TGATCA 2 cut(s) 169, 1062
BfaI CTAG 3 cut(s) 458, 993, 1070
BfmI CTRYAG 2 cut(s) 405, 640
BfoI RGCGCY 2 cut(s) 34, 89
BglI GCCNNNNNGGC 1 cut(s) 585
BisI GCNGC 6 cut(s) 66, 516, 640, 825, 978, 987
BlsI GCNGC 6 cut(s) 67, 517, 641, 826, 979, 988
Bme1390I CCNGG 3 cut(s) 122, 186, 590
BmgT120I GGNCC 2 cut(s) 578, 714
BmiI GGNNCC 1 cut(s) 87
BmrFI CCNGG 3 cut(s) 122, 186, 590
BmrI ACTGGG 1 cut(s) 1110
BmsI GCATC 4 cut(s) 245, 327, 1035, 1150
BmuI ACTGGG 1 cut(s) 1110
BpiI GAAGAC 3 cut(s) 6, 632, 1022
BpmI CTGGAG 3 cut(s) 197, 207, 611
BpuEI CTTGAG 2 cut(s) 47, 878
Bsa29I ATCGAT 1 cut(s) 59
BsaHI GRCGYC 2 cut(s) 86, 373
BsaJI CCNNGG 4 cut(s) 34, 184, 809, 1244
BsaXI ACNNNNNCTCC 2 cut(s) 584, 614
Bse1I ACTGG 4 cut(s) 791, 1040, 1116, 1153
Bse3DI GCAATG 3 cut(s) 132, 261, 815
BseBI CCWGG 3 cut(s) 122, 186, 590
BseCI ATCGAT 1 cut(s) 59
BseDI CCNNGG 4 cut(s) 34, 184, 809, 1244
BseGI GGATG 1 cut(s) 775
BseMI GCAATG 3 cut(s) 132, 261, 815
BseMII CTCAG 1 cut(s) 966
BseNI ACTGG 4 cut(s) 791, 1040, 1116, 1153
BseRI GAGGAG 1 cut(s) 877
BseSI GKGCMC 1 cut(s) 1079
BseXI GCAGC 6 cut(s) 52, 527, 626, 811, 964, 973
Bsh1236I CGCG 1 cut(s) 811
BshFI GGCC 5 cut(s) 579, 588, 669, 715, 1152
BshNI GGYRCC 1 cut(s) 85
BshVI ATCGAT 1 cut(s) 59
BsiHKAI GWGCWC 2 cut(s) 750, 1079
BsnI GGCC 5 cut(s) 579, 588, 669, 715, 1152
Bsp1286I GDGCHC 2 cut(s) 750, 1079
Bsp143I GATC 3 cut(s) 56, 169, 1062
Bsp19I CCATGG 2 cut(s) 34, 1244
BspACI CCGC 4 cut(s) 809, 811, 1222, 1291
BspANI GGCC 5 cut(s) 579, 588, 669, 715, 1152
BspCNI CTCAG 1 cut(s) 965
BspDI ATCGAT 1 cut(s) 59
BspFNI CGCG 1 cut(s) 811
BspLI GGNNCC 1 cut(s) 87
BspMAI CTGCAG 2 cut(s) 409, 644
BspPI GGATC 1 cut(s) 64
BspQI GCTCTTC 1 cut(s) 1275
BspT107I GGYRCC 1 cut(s) 85
BsrDI GCAATG 3 cut(s) 132, 261, 815
BsrI ACTGG 4 cut(s) 791, 1040, 1116, 1153
BssECI CCNNGG 4 cut(s) 34, 184, 809, 1244
BssMI GATC 3 cut(s) 56, 169, 1062
BssNAI GTATAC 1 cut(s) 773
BssNI GRCGYC 2 cut(s) 86, 373
BssT1I CCWWGG 2 cut(s) 34, 1244
Bst1107I GTATAC 1 cut(s) 773
Bst2UI CCWGG 3 cut(s) 122, 186, 590
Bst4CI ACNGT 6 cut(s) 264, 544, 676, 711, 1081, 1166
Bst6I CTCTTC 1 cut(s) 1275
BstACI GRCGYC 2 cut(s) 86, 373
BstAPI GCANNNNNTGC 1 cut(s) 986
BstC8I GCNNGC 1 cut(s) 822
BstDEI CTNAG 3 cut(s) 96, 915, 952
BstDSI CCRYGG 3 cut(s) 34, 809, 1244
BstF5I GGATG 1 cut(s) 775
BstFNI CGCG 1 cut(s) 811
BstH2I RGCGCY 2 cut(s) 34, 89
BstHHI GCGC 2 cut(s) 33, 88
BstKTI GATC 3 cut(s) 59, 172, 1065
BstMBI GATC 3 cut(s) 56, 169, 1062
BstMWI GCNNNNNNNGC 5 cut(s) 345, 585, 817, 983, 986
BstNI CCWGG 3 cut(s) 122, 186, 590
BstSCI CCNGG 3 cut(s) 120, 184, 588
BstSFI CTRYAG 2 cut(s) 405, 640
BstSLI GKGCMC 1 cut(s) 1079
BstUI CGCG 1 cut(s) 811
BstV1I GCAGC 6 cut(s) 52, 527, 626, 811, 964, 973
BstV2I GAAGAC 3 cut(s) 6, 632, 1022
BstZ17I GTATAC 1 cut(s) 773
Bsu15I ATCGAT 1 cut(s) 59
BsuRI GGCC 5 cut(s) 579, 588, 669, 715, 1152
BsuTUI ATCGAT 1 cut(s) 59
BtgI CCRYGG 3 cut(s) 34, 809, 1244
BtsCI GGATG 1 cut(s) 775
BtsIMutI CAGTG 3 cut(s) 1047, 1077, 1123
Cac8I GCNNGC 1 cut(s) 822
CfoI GCGC 2 cut(s) 33, 88
Cfr13I GGNCC 2 cut(s) 578, 714
Cfr42I CCGCGG 1 cut(s) 812
ClaI ATCGAT 1 cut(s) 59
Csp6I GTAC 2 cut(s) 50, 435
CviAII CATG 8 cut(s) 35, 82, 131, 961, 1093, 1124, 1207, 1245
CviQI GTAC 2 cut(s) 50, 435
DdeI CTNAG 3 cut(s) 96, 915, 952
DinI GGCGCC 1 cut(s) 87
DpnI GATC 3 cut(s) 58, 171, 1064
DpnII GATC 3 cut(s) 56, 169, 1062
DraI TTTAAA 2 cut(s) 634, 1131
EaeI YGGCCR 1 cut(s) 1150
Eam1104I CTCTTC 1 cut(s) 1275
EarI CTCTTC 1 cut(s) 1275
Eco130I CCWWGG 2 cut(s) 34, 1244
Eco147I AGGCCT 1 cut(s) 669
Eco57I CTGAAG 2 cut(s) 335, 783
EcoRII CCWGG 3 cut(s) 120, 184, 588
EcoT14I CCWWGG 2 cut(s) 34, 1244
EcoT22I ATGCAT 1 cut(s) 132
EgeI GGCGCC 1 cut(s) 87
EheI GGCGCC 1 cut(s) 87
ErhI CCWWGG 2 cut(s) 34, 1244
FaeI CATG 8 cut(s) 38, 85, 134, 964, 1096, 1127, 1210, 1248
FatI CATG 8 cut(s) 34, 81, 130, 960, 1092, 1123, 1206, 1244
FauI CCCGC 2 cut(s) 816, 1229
FbaI TGATCA 2 cut(s) 169, 1062
FblI GTMKAC 1 cut(s) 772
Fnu4HI GCNGC 6 cut(s) 66, 516, 640, 825, 978, 987
FokI GGATG 1 cut(s) 762
Fsp4HI GCNGC 6 cut(s) 66, 516, 640, 825, 978, 987
FspBI CTAG 3 cut(s) 458, 993, 1070
GlaI GCGC 2 cut(s) 32, 87
GluI GCNGC 6 cut(s) 66, 516, 640, 825, 978, 987
GsuI CTGGAG 3 cut(s) 197, 207, 611
HaeII RGCGCY 2 cut(s) 34, 89
HaeIII GGCC 5 cut(s) 579, 588, 669, 715, 1152
HhaI GCGC 2 cut(s) 33, 88
Hin1I GRCGYC 2 cut(s) 86, 373
Hin1II CATG 8 cut(s) 38, 85, 134, 964, 1096, 1127, 1210, 1248
Hin6I GCGC 2 cut(s) 31, 86
HinP1I GCGC 2 cut(s) 31, 86
HincII GTYRAC 1 cut(s) 603
HindII GTYRAC 1 cut(s) 603
HindIII AAGCTT 3 cut(s) 109, 384, 917
HinfI GANTC 4 cut(s) 189, 686, 996, 1270
HphI GGTGA 1 cut(s) 1294
Hpy166II GTNNAC 5 cut(s) 443, 603, 773, 1077, 1186
Hpy188I TCNGA 2 cut(s) 763, 1146
Hpy188III TCNNGA 4 cut(s) 26, 176, 1024, 1277
Hpy8I GTNNAC 5 cut(s) 443, 603, 773, 1077, 1186
HpyAV CCTTC 3 cut(s) 252, 359, 1259
HpyCH4III ACNGT 6 cut(s) 264, 544, 676, 711, 1081, 1166
HpyCH4IV ACGT 3 cut(s) 373, 629, 1196
HpyF10VI GCNNNNNNNGC 5 cut(s) 345, 585, 817, 983, 986
HpyF3I CTNAG 3 cut(s) 96, 915, 952
HpySE526I ACGT 3 cut(s) 373, 629, 1196
Hsp92I GRCGYC 2 cut(s) 86, 373
Hsp92II CATG 8 cut(s) 38, 85, 134, 964, 1096, 1127, 1210, 1248
HspAI GCGC 2 cut(s) 31, 86
KasI GGCGCC 1 cut(s) 85
Ksp22I TGATCA 2 cut(s) 169, 1062
KspI CCGCGG 1 cut(s) 812
Kzo9I GATC 3 cut(s) 56, 169, 1062
LguI GCTCTTC 1 cut(s) 1275
LmnI GCTCC 2 cut(s) 592, 931
Lsp1109I GCAGC 6 cut(s) 52, 527, 626, 811, 964, 973
LweI GCATC 4 cut(s) 245, 327, 1035, 1150
MaeI CTAG 3 cut(s) 458, 993, 1070
MaeII ACGT 3 cut(s) 373, 629, 1196
MaeIII GTNAC 3 cut(s) 38, 567, 705
MalI GATC 3 cut(s) 58, 171, 1064
MboI GATC 3 cut(s) 56, 169, 1062
MboII GAAGA 8 cut(s) 6, 116, 637, 875, 1024, 1027, 1274, 1292
MfeI CAATTG 1 cut(s) 981
MhlI GDGCHC 2 cut(s) 750, 1079
MlsI TGGCCA 1 cut(s) 1152
MluNI TGGCCA 1 cut(s) 1152
Mly113I GGCGCC 1 cut(s) 86
MlyI GAGTC 1 cut(s) 198
MnlI CCTC 7 cut(s) 207, 591, 843, 855, 858, 1242, 1284
Mox20I TGGCCA 1 cut(s) 1152
Mph1103I ATGCAT 1 cut(s) 132
MroXI GAANNNNTTC 2 cut(s) 1019, 1269
MscI TGGCCA 1 cut(s) 1152
MseI TTAA 3 cut(s) 497, 633, 1130
Msp20I TGGCCA 1 cut(s) 1152
MspA1I CMGCKG 1 cut(s) 811
MspR9I CCNGG 3 cut(s) 122, 186, 590
MunI CAATTG 1 cut(s) 981
MvaI CCWGG 3 cut(s) 122, 186, 590
MvnI CGCG 1 cut(s) 811
MwoI GCNNNNNNNGC 5 cut(s) 345, 585, 817, 983, 986
NarI GGCGCC 1 cut(s) 86
NcoI CCATGG 2 cut(s) 34, 1244
NdeII GATC 3 cut(s) 56, 169, 1062
NlaIII CATG 8 cut(s) 38, 85, 134, 964, 1096, 1127, 1210, 1248
NlaIV GGNNCC 1 cut(s) 87
NsiI ATGCAT 1 cut(s) 132
PceI AGGCCT 1 cut(s) 669
PciSI GCTCTTC 1 cut(s) 1275
PcsI WCGNNNNNNNCGW 1 cut(s) 65
PdmI GAANNNNTTC 2 cut(s) 1019, 1269
PfeI GAWTC 3 cut(s) 686, 996, 1270
PkrI GCNGC 6 cut(s) 67, 517, 641, 826, 979, 988
PleI GAGTC 1 cut(s) 197
PluTI GGCGCC 1 cut(s) 89
PpsI GAGTC 1 cut(s) 197
PsiI TTATAA 2 cut(s) 944, 1313
Psp6I CCWGG 3 cut(s) 120, 184, 588
PspGI CCWGG 3 cut(s) 120, 184, 588
PspN4I GGNNCC 1 cut(s) 87
PspPI GGNCC 2 cut(s) 578, 714
PstI CTGCAG 2 cut(s) 409, 644
RsaI GTAC 2 cut(s) 51, 436
RsaNI GTAC 2 cut(s) 50, 435
SacII CCGCGG 1 cut(s) 812
SapI GCTCTTC 1 cut(s) 1275
SaqAI TTAA 3 cut(s) 497, 633, 1130
SatI GCNGC 6 cut(s) 66, 516, 640, 825, 978, 987
Sau3AI GATC 3 cut(s) 56, 169, 1062
Sau96I GGNCC 2 cut(s) 578, 714
SchI GAGTC 1 cut(s) 198
ScrFI CCNGG 3 cut(s) 122, 186, 590
SduI GDGCHC 2 cut(s) 750, 1079
SfaNI GCATC 4 cut(s) 245, 327, 1035, 1150
SfcI CTRYAG 2 cut(s) 405, 640
SfiI GGCCNNNNNGGCC 1 cut(s) 585
SfoI GGCGCC 1 cut(s) 87
Sfr303I CCGCGG 1 cut(s) 812
SgrBI CCGCGG 1 cut(s) 812
SmlI CTYRAG 2 cut(s) 26, 857
SmoI CTYRAG 2 cut(s) 26, 857
SseBI AGGCCT 1 cut(s) 669
SsiI CCGC 4 cut(s) 809, 811, 1222, 1291
SspDI GGCGCC 1 cut(s) 85
SspI AATATT 1 cut(s) 509
SspMI CTAG 3 cut(s) 458, 993, 1070
StuI AGGCCT 1 cut(s) 669
StyD4I CCNGG 3 cut(s) 120, 184, 588
StyI CCWWGG 2 cut(s) 34, 1244
TaaI ACNGT 6 cut(s) 264, 544, 676, 711, 1081, 1166
TaiI ACGT 3 cut(s) 376, 632, 1199
TaqI TCGA 2 cut(s) 59, 148
TatI WGTACW 1 cut(s) 434
TfiI GAWTC 3 cut(s) 686, 996, 1270
Tru1I TTAA 3 cut(s) 497, 633, 1130
Tru9I TTAA 3 cut(s) 497, 633, 1130
TscAI CASTG 3 cut(s) 1047, 1084, 1123
TseI GCWGC 6 cut(s) 65, 515, 639, 824, 977, 986
TspDTI ATGAA 6 cut(s) 70, 606, 1081, 1119, 1188, 1223
TspGWI ACGGA 1 cut(s) 768
TspRI CASTG 3 cut(s) 1047, 1084, 1123
VneI GTGCAC 1 cut(s) 1075
XapI RAATTY 3 cut(s) 612, 719, 1297
XmiI GTMKAC 1 cut(s) 772
XmnI GAANNNNTTC 2 cut(s) 1019, 1269
XspI CTAG 3 cut(s) 458, 993, 1070
ZraI GACGTC 1 cut(s) 374
Zsp2I ATGCAT 1 cut(s) 132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.