FvH4_7g11540

UDP-glucuronate 4-epimerase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0008323
Physical Location & Seq
Forward (+)
10660006 .. 10662286
2281 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g11540.t1

Sequence Viewer

Length: 1305 bp
ATGACCCAGCTGAAGCAAATGGCTCATCTTGACAATGGTCCCCCAACTCCGGGCAAGTTCAAGCCCTACATTCACAGAGTCCGGTGGCAAAGCTCACTGGCCAAGCTCTCCTTGTGGTCCTTGGTCTTCTTGGCCCTGATCTTGCTCTTCTTTTTCCGGTCGCCGTCGTCCAGCTCCGTCCCCTCCGATCCATCCCGCCGCTCCCTCCGGACCTACAACTGGGGCGGACCCGCCTGGGAGAAACGGGTCAGGTCATCCTCCCGGGTCAGGTCAAGAAACGGCATGTCGGTTCTCGTCACCGGCGCCGCCGGCTTCGTCGGAACACACGTCTCCGCCGCACTCAAGCGCCGTGGAGACGGCGTCTTGGGTTTGGATAGCTTTAACGACTATTACGATCCGTCGTTGAAGCGGGCGAGGCAGGCGCTGCTGGAGAGGAGCGGGGTGTTCATTGTGGAAGGGGATATAAACGACATGGCGTTGCTGAGCAAGCTTTTCGAGGTGGTGGCGTTTACTCATGTGATGCATTTGGCTGCTCAGGCTGGCGTGAGGTATGCTATGGAGAATCCTGGGTCATATGTTCATAGTAATATAGCTGGTCTTGTTAATCTGCTTGAGGTTTGTAAGAATGCGAATCCGCAGCCTGCGATTGTTTGGGCTAGCTCTAGCTCTGTGTATGGACTTAATACTAAGGTACCCTTTTCGGAGAGAGACAGGACTGACCAGCCTGCTAGTTTGTATGCTGCTACTAAGAAAGCCGGTGAGGAGATTGCGCATACTTATAATCATATCTATGGCCTTTCGCTTACCGGGTTGAGGTTCTTTACAGTTTATGGCCCTTGGGGGAGGCCGGACATGGCTTACTTCTTTTTCACGAGGGATATATTGAAGGGGAAGACTATTCCCATTTTTGAGGCCGCTAATCATGGAACGGTAGCGAGGGATTTTACCTACATTGATGATATTGTTAAGGGCTGCTTGGCGTCACTGGATACTGCGGAGAAGAGTACCGGGAGTGGGGGGAAGAAGAAGGGTCCTGCGCAGTTGAGGGTTTTCAATTTGGGGAATACGTCTCCTGTGCCTGTTTCGGATCTTGTTACTATTTTGGAGAGGTTGTTGAAGGTGAAGGCTAAGAGGAGCATTTTGAAGTTGCCACGTAATGGGGATGTTCAGTTTACTCACGCAAACATCAGCTCCGCACAGAGGGAGCTTGGGTATAAGCCCACGACGGATCTGCAGACAGGGTTGAAGAAATTCGTTAGGTGGTACCTGACTTACTATAATGGCGGGAAGAAGGCTGCTGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
ko00520 ko01100 map00520 map01100
Pfam Domains
Protein Families
Epimerase GDP_Man_Dehyd

Protein Analysis

435

Amino Acids

47.95

Weight (kDa)

9.98

Isoelectric Point (pI)

45.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RmlD_sub_bind PF04321 95 - 261 1.2e-13 RmlD substrate binding domain
Epimerase PF01370 97 - 334 3.3e-51 NAD dependent epimerase/dehydratase family
Polysacc_synt_2 PF02719 97 - 276 1.2e-08 Polysaccharide biosynthesis protein
GDP_Man_Dehyd PF16363 98 - 417 1.1e-46 GDP-mannose 4,6 dehydratase
3Beta_HSD PF01073 98 - 375 4.1e-13 3-beta hydroxysteroid dehydrogenase/isomerase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 780
Acc16I TGCGCA 2 cut(s) 771, 1038
Acc65I GGTACC 2 cut(s) 691, 1263
AccB1I GGYRCC 3 cut(s) 302, 691, 1263
AccB7I CCANNNNNTGG 1 cut(s) 1157
AccBSI CCGCTC 2 cut(s) 201, 438
AccIII TCCGGA 1 cut(s) 207
AclWI GGATC 4 cut(s) 182, 389, 1095, 1236
AcoI YGGCCR 1 cut(s) 99
AcsI RAATTY 1 cut(s) 1250
AcuI CTGAAG 1 cut(s) 32
AcyI GRCGYC 3 cut(s) 303, 360, 980
AfaI GTAC 3 cut(s) 693, 1006, 1265
AfiI CCNNNNNNNGG 8 cut(s) 49, 50, 219, 267, 813, 1014, 1157, 1200
AflIII ACRYGT 1 cut(s) 325
AgsI TTSAA 7 cut(s) 61, 406, 886, 1054, 1117, 1144, 1246
AjiI CACGTC 1 cut(s) 328
AjnI CCWGG 2 cut(s) 233, 565
Alw26I GTCTC 4 cut(s) 334, 348, 702, 1074
AlwI GGATC 4 cut(s) 182, 389, 1095, 1236
AlwNI CAGNNNCTG 1 cut(s) 424
Ama87I CYCGRG 1 cut(s) 261
Aor13HI TCCGGA 1 cut(s) 207
AoxI GGCC 6 cut(s) 99, 132, 793, 832, 845, 912
ApeKI GCWGC 6 cut(s) 424, 530, 637, 740, 972, 1295
ApoI RAATTY 1 cut(s) 1250
Asp700I GAANNNNTTC 1 cut(s) 1250
Asp718I GGTACC 2 cut(s) 691, 1263
AspLEI GCGC 5 cut(s) 305, 348, 424, 772, 1039
AspS9I GGNCC 7 cut(s) 38, 117, 133, 210, 227, 833, 1031
AsuC2I CCSGG 5 cut(s) 51, 262, 263, 808, 1009
AsuHPI GGTGA 3 cut(s) 289, 770, 1132
AsuNHI GCTAGC 1 cut(s) 656
AvaI CYCGRG 1 cut(s) 261
AvaII GGWCC 5 cut(s) 38, 117, 210, 227, 1031
BaeI ACNNNNGTAYC 2 cut(s) 675, 708
BalI TGGCCA 1 cut(s) 101
BanI GGYRCC 3 cut(s) 302, 691, 1263
BauI CACGAG 1 cut(s) 871
BbsI GAAGAC 2 cut(s) 118, 899
BbvI GCAGC 6 cut(s) 411, 517, 649, 727, 959, 1282
BccI CCATC 1 cut(s) 199
BceAI ACGGC 4 cut(s) 148, 295, 333, 373
BcgI CGANNNNNNTGC 4 cut(s) 475, 509, 1213, 1247
BciT130I CCWGG 2 cut(s) 235, 567
BciVI GTATCC 1 cut(s) 982
BcnI CCSGG 5 cut(s) 51, 262, 263, 808, 1009
BcoDI GTCTC 4 cut(s) 334, 348, 702, 1074
BfaI CTAG 3 cut(s) 657, 663, 729
BfmI CTRYAG 1 cut(s) 1232
BfoI RGCGCY 3 cut(s) 306, 349, 425
BfuI GTATCC 1 cut(s) 982
BlpI GCTNAGC 1 cut(s) 482
Bme1390I CCNGG 7 cut(s) 51, 235, 262, 263, 567, 808, 1009
Bme18I GGWCC 5 cut(s) 38, 117, 210, 227, 1031
BmeT110I CYCGRG 1 cut(s) 261
BmgBI CACGTC 1 cut(s) 328
BmgT120I GGNCC 7 cut(s) 38, 117, 133, 210, 227, 833, 1031
BmiI GGNNCC 6 cut(s) 40, 229, 304, 693, 1032, 1265
BmrFI CCNGG 7 cut(s) 51, 235, 262, 263, 567, 808, 1009
BmrI ACTGGG 1 cut(s) 229
BmsI GCATC 1 cut(s) 510
BmtI GCTAGC 1 cut(s) 660
BmuI ACTGGG 1 cut(s) 229
BoxI GACNNNNGTC 1 cut(s) 36
BpiI GAAGAC 2 cut(s) 118, 899
BpmI CTGGAG 1 cut(s) 449
Bpu10I CCTNAGC 1 cut(s) 534
Bpu1102I GCTNAGC 1 cut(s) 482
BpuEI CTTGAG 2 cut(s) 326, 632
BpuMI CCSGG 5 cut(s) 51, 262, 263, 808, 1009
BsaAI YACGTR 1 cut(s) 1154
BsaHI GRCGYC 3 cut(s) 303, 360, 980
BsaJI CCNNGG 6 cut(s) 120, 234, 261, 349, 566, 836
BsaWI WCCGGW 3 cut(s) 81, 156, 207
BsaXI ACNNNNNCTCC 8 cut(s) 345, 375, 1097, 1127, 1175, 1196, 1205, 1226
Bsc4I CCNNNNNNNGG 8 cut(s) 49, 50, 219, 267, 813, 1014, 1157, 1200
Bse118I RCCGGY 3 cut(s) 299, 308, 755
Bse1I ACTGG 3 cut(s) 102, 224, 990
BseAI TCCGGA 1 cut(s) 207
BseBI CCWGG 2 cut(s) 235, 567
BseDI CCNNGG 6 cut(s) 120, 234, 261, 349, 566, 836
BseGI GGATG 3 cut(s) 191, 254, 1168
BseLI CCNNNNNNNGG 8 cut(s) 49, 50, 219, 267, 813, 1014, 1157, 1200
BseMII CTCAG 2 cut(s) 473, 548
BseNI ACTGG 3 cut(s) 102, 224, 990
BseRI GAGGAG 3 cut(s) 448, 776, 1147
BseXI GCAGC 6 cut(s) 411, 517, 649, 727, 959, 1282
BseYI CCCAGC 1 cut(s) 6
Bsh1285I CGRYCG 1 cut(s) 161
BshFI GGCC 6 cut(s) 101, 134, 795, 834, 847, 914
BshNI GGYRCC 3 cut(s) 302, 691, 1263
BsiEI CGRYCG 1 cut(s) 161
BsiHKCI CYCGRG 1 cut(s) 261
BslFI GGGAC 2 cut(s) 24, 164
BslI CCNNNNNNNGG 8 cut(s) 49, 50, 219, 267, 813, 1014, 1157, 1200
BsmAI GTCTC 4 cut(s) 334, 348, 702, 1074
BsmBI CGTCTC 3 cut(s) 334, 348, 1074
BsmFI GGGAC 2 cut(s) 24, 164
BsmI GAATGC 1 cut(s) 631
BsnI GGCC 6 cut(s) 101, 134, 795, 834, 847, 914
BsoBI CYCGRG 1 cut(s) 261
Bsp13I TCCGGA 1 cut(s) 207
Bsp143I GATC 5 cut(s) 138, 187, 394, 1087, 1228
Bsp1720I GCTNAGC 1 cut(s) 482
BspANI GGCC 6 cut(s) 101, 134, 795, 834, 847, 914
BspCNI CTCAG 2 cut(s) 474, 547
BspEI TCCGGA 1 cut(s) 207
BspLI GGNNCC 6 cut(s) 40, 229, 304, 693, 1032, 1265
BspMAI CTGCAG 1 cut(s) 1236
BspOI GCTAGC 1 cut(s) 660
BspPI GGATC 4 cut(s) 182, 389, 1095, 1236
BspQI GCTCTTC 1 cut(s) 152
BspT107I GGYRCC 3 cut(s) 302, 691, 1263
BsrBI CCGCTC 2 cut(s) 201, 438
BsrFI RCCGGY 3 cut(s) 299, 308, 755
BsrI ACTGG 3 cut(s) 102, 224, 990
BssAI RCCGGY 3 cut(s) 299, 308, 755
BssECI CCNNGG 6 cut(s) 120, 234, 261, 349, 566, 836
BssMI GATC 5 cut(s) 138, 187, 394, 1087, 1228
BssNI GRCGYC 3 cut(s) 303, 360, 980
BssSI CACGAG 1 cut(s) 871
BssT1I CCWWGG 2 cut(s) 120, 836
Bst2BI CACGAG 1 cut(s) 871
Bst2UI CCWGG 2 cut(s) 235, 567
Bst4CI ACNGT 2 cut(s) 826, 931
Bst6I CTCTTC 2 cut(s) 152, 995
BstACI GRCGYC 3 cut(s) 303, 360, 980
BstAPI GCANNNNNTGC 1 cut(s) 424
BstBAI YACGTR 1 cut(s) 1154
BstC8I GCNNGC 9 cut(s) 310, 411, 420, 488, 541, 642, 658, 726, 1300
BstDEI CTNAG 5 cut(s) 482, 534, 687, 747, 1128
BstDSI CCRYGG 1 cut(s) 349
BstF5I GGATG 3 cut(s) 191, 254, 1168
BstH2I RGCGCY 3 cut(s) 306, 349, 425
BstHHI GCGC 5 cut(s) 305, 348, 424, 772, 1039
BstKTI GATC 5 cut(s) 141, 190, 397, 1090, 1231
BstMAI GTCTC 4 cut(s) 334, 348, 702, 1074
BstMBI GATC 5 cut(s) 138, 187, 394, 1087, 1228
BstMCI CGRYCG 1 cut(s) 161
BstMWI GCNNNNNNNGC 6 cut(s) 309, 415, 419, 424, 487, 536
BstNI CCWGG 2 cut(s) 235, 567
BstNSI RCATGY 1 cut(s) 286
BstPAI GACNNNNGTC 1 cut(s) 36
BstSCI CCNGG 7 cut(s) 49, 233, 260, 261, 565, 806, 1007
BstSFI CTRYAG 1 cut(s) 1232
BstV1I GCAGC 6 cut(s) 411, 517, 649, 727, 959, 1282
BstV2I GAAGAC 2 cut(s) 118, 899
BstX2I RGATCY 2 cut(s) 1087, 1228
BstYI RGATCY 2 cut(s) 1087, 1228
BsuI GTATCC 1 cut(s) 982
BsuRI GGCC 6 cut(s) 101, 134, 795, 834, 847, 914
BtgI CCRYGG 1 cut(s) 349
BtrI CACGTC 1 cut(s) 328
BtsCI GGATG 3 cut(s) 191, 254, 1168
BtsIMutI CAGTG 2 cut(s) 95, 983
Cac8I GCNNGC 9 cut(s) 310, 411, 420, 488, 541, 642, 658, 726, 1300
CaiI CAGNNNCTG 1 cut(s) 424
CfoI GCGC 5 cut(s) 305, 348, 424, 772, 1039
Cfr10I RCCGGY 3 cut(s) 299, 308, 755
Cfr13I GGNCC 7 cut(s) 38, 117, 133, 210, 227, 833, 1031
Cfr9I CCCGGG 1 cut(s) 261
CseI GACGC 2 cut(s) 349, 969
Csp6I GTAC 3 cut(s) 692, 1005, 1264
CspCI CAANNNNNGTGG 2 cut(s) 331, 366
CviAII CATG 5 cut(s) 283, 472, 515, 853, 923
CviQI GTAC 3 cut(s) 692, 1005, 1264
DdeI CTNAG 5 cut(s) 482, 534, 687, 747, 1128
DinI GGCGCC 1 cut(s) 304
DpnI GATC 5 cut(s) 140, 189, 396, 1089, 1230
DpnII GATC 5 cut(s) 138, 187, 394, 1087, 1228
EaeI YGGCCR 1 cut(s) 99
Eam1104I CTCTTC 2 cut(s) 152, 995
EarI CTCTTC 2 cut(s) 152, 995
EciI GGCGGA 2 cut(s) 240, 322
Eco130I CCWWGG 2 cut(s) 120, 836
Eco47I GGWCC 5 cut(s) 38, 117, 210, 227, 1031
Eco57I CTGAAG 1 cut(s) 32
Eco88I CYCGRG 1 cut(s) 261
EcoO109I RGGNCCY 1 cut(s) 1031
EcoRII CCWGG 2 cut(s) 233, 565
EcoT14I CCWWGG 2 cut(s) 120, 836
EcoT22I ATGCAT 1 cut(s) 525
EgeI GGCGCC 1 cut(s) 304
EheI GGCGCC 1 cut(s) 304
ErhI CCWWGG 2 cut(s) 120, 836
Esp3I CGTCTC 3 cut(s) 334, 348, 1074
FaeI CATG 5 cut(s) 286, 475, 518, 856, 926
FalI AAGNNNNNCTT 6 cut(s) 95, 127, 680, 712, 959, 991
FaqI GGGAC 2 cut(s) 24, 164
FatI CATG 5 cut(s) 282, 471, 514, 852, 922
FauI CCCGC 5 cut(s) 203, 238, 402, 431, 1277
FauNDI CATATG 1 cut(s) 574
FokI GGATG 3 cut(s) 178, 241, 1175
FspBI CTAG 3 cut(s) 657, 663, 729
FspI TGCGCA 2 cut(s) 771, 1038
GlaI GCGC 5 cut(s) 304, 347, 423, 771, 1038
GsaI CCCAGC 1 cut(s) 10
GsuI CTGGAG 1 cut(s) 449
HaeII RGCGCY 3 cut(s) 306, 349, 425
HaeIII GGCC 6 cut(s) 101, 134, 795, 834, 847, 914
HgaI GACGC 2 cut(s) 349, 969
HhaI GCGC 5 cut(s) 305, 348, 424, 772, 1039
Hin1I GRCGYC 3 cut(s) 303, 360, 980
Hin1II CATG 5 cut(s) 286, 475, 518, 856, 926
Hin6I GCGC 5 cut(s) 303, 346, 422, 770, 1037
HinP1I GCGC 5 cut(s) 303, 346, 422, 770, 1037
HindIII AAGCTT 1 cut(s) 488
HinfI GANTC 3 cut(s) 78, 562, 631
HphI GGTGA 3 cut(s) 289, 770, 1132
Hpy166II GTNNAC 2 cut(s) 510, 1173
Hpy188I TCNGA 4 cut(s) 187, 320, 703, 1087
Hpy188III TCNNGA 4 cut(s) 29, 208, 273, 871
Hpy8I GTNNAC 2 cut(s) 510, 1173
Hpy99I CGWCG 4 cut(s) 169, 320, 403, 1228
HpyAV CCTTC 6 cut(s) 449, 880, 1021, 1111, 1117, 1285
HpyCH4III ACNGT 2 cut(s) 826, 931
HpyCH4IV ACGT 3 cut(s) 327, 1067, 1153
HpyCH4V TGCA 2 cut(s) 523, 1234
HpyF10VI GCNNNNNNNGC 6 cut(s) 309, 415, 419, 424, 487, 536
HpyF3I CTNAG 5 cut(s) 482, 534, 687, 747, 1128
HpySE526I ACGT 3 cut(s) 327, 1067, 1153
Hsp92I GRCGYC 3 cut(s) 303, 360, 980
Hsp92II CATG 5 cut(s) 286, 475, 518, 856, 926
HspAI GCGC 5 cut(s) 303, 346, 422, 770, 1037
KasI GGCGCC 1 cut(s) 302
Kpn2I TCCGGA 1 cut(s) 207
KpnI GGTACC 2 cut(s) 695, 1267
KroI GCCGGC 1 cut(s) 308
KroNI GCCGGC 1 cut(s) 310
Kzo9I GATC 5 cut(s) 138, 187, 394, 1087, 1228
LguI GCTCTTC 1 cut(s) 152
LmnI GCTCC 6 cut(s) 179, 206, 435, 1134, 1196, 1204
Lsp1109I GCAGC 6 cut(s) 411, 517, 649, 727, 959, 1282
LweI GCATC 1 cut(s) 510
MaeI CTAG 3 cut(s) 657, 663, 729
MaeII ACGT 3 cut(s) 327, 1067, 1153
MaeIII GTNAC 3 cut(s) 295, 981, 1093
MalI GATC 5 cut(s) 140, 189, 396, 1089, 1230
MbiI CCGCTC 2 cut(s) 201, 438
MboI GATC 5 cut(s) 138, 187, 394, 1087, 1228
MboII GAAGA 8 cut(s) 118, 139, 904, 1012, 1033, 1036, 1258, 1300
MflI RGATCY 2 cut(s) 1087, 1228
MlsI TGGCCA 1 cut(s) 101
MluCI AATT 2 cut(s) 1054, 1250
MluNI TGGCCA 1 cut(s) 101
Mly113I GGCGCC 1 cut(s) 303
MlyI GAGTC 1 cut(s) 87
MmeI TCCRAC 1 cut(s) 298
Mox20I TGGCCA 1 cut(s) 101
Mph1103I ATGCAT 1 cut(s) 525
MroI TCCGGA 1 cut(s) 207
MroNI GCCGGC 1 cut(s) 308
MroXI GAANNNNTTC 1 cut(s) 1250
MscI TGGCCA 1 cut(s) 101
MseI TTAA 4 cut(s) 381, 603, 681, 966
MslI CAYNNNNRTG 1 cut(s) 789
Msp20I TGGCCA 1 cut(s) 101
MspA1I CMGCKG 1 cut(s) 10
MspR9I CCNGG 7 cut(s) 51, 235, 262, 263, 567, 808, 1009
Mva1269I GAATGC 1 cut(s) 631
MvaI CCWGG 2 cut(s) 235, 567
MwoI GCNNNNNNNGC 6 cut(s) 309, 415, 419, 424, 487, 536
NaeI GCCGGC 1 cut(s) 310
NarI GGCGCC 1 cut(s) 303
NciI CCSGG 5 cut(s) 51, 262, 263, 808, 1009
NdeI CATATG 1 cut(s) 574
NdeII GATC 5 cut(s) 138, 187, 394, 1087, 1228
NgoMIV GCCGGC 1 cut(s) 308
NheI GCTAGC 1 cut(s) 656
NlaIII CATG 5 cut(s) 286, 475, 518, 856, 926
NlaIV GGNNCC 6 cut(s) 40, 229, 304, 693, 1032, 1265
NmuCI GTSAC 2 cut(s) 295, 981
NsbI TGCGCA 2 cut(s) 771, 1038
NsiI ATGCAT 1 cut(s) 525
NspI RCATGY 1 cut(s) 286
PciSI GCTCTTC 1 cut(s) 152
PcsI WCGNNNNNNNCGW 2 cut(s) 324, 390
PctI GAATGC 1 cut(s) 631
PdiI GCCGGC 1 cut(s) 310
PdmI GAANNNNTTC 1 cut(s) 1250
PfeI GAWTC 2 cut(s) 562, 631
PflFI GACNNNGTC 1 cut(s) 359
PflMI CCANNNNNTGG 1 cut(s) 1157
PleI GAGTC 1 cut(s) 86
PluTI GGCGCC 1 cut(s) 306
PpsI GAGTC 1 cut(s) 86
Ppu21I YACGTR 1 cut(s) 1154
PpuMI RGGWCCY 1 cut(s) 1031
PshAI GACNNNNGTC 1 cut(s) 36
PsiI TTATAA 1 cut(s) 780
Psp5II RGGWCCY 1 cut(s) 1031
Psp6I CCWGG 2 cut(s) 233, 565
PspFI CCCAGC 1 cut(s) 6
PspGI CCWGG 2 cut(s) 233, 565
PspN4I GGNNCC 6 cut(s) 40, 229, 304, 693, 1032, 1265
PspPI GGNCC 7 cut(s) 38, 117, 133, 210, 227, 833, 1031
PspPPI RGGWCCY 1 cut(s) 1031
PstI CTGCAG 1 cut(s) 1236
PstNI CAGNNNCTG 1 cut(s) 424
PsuI RGATCY 2 cut(s) 1087, 1228
PsyI GACNNNGTC 1 cut(s) 359
PvuII CAGCTG 1 cut(s) 10
RsaI GTAC 3 cut(s) 693, 1006, 1265
RsaNI GTAC 3 cut(s) 692, 1005, 1264
RseI CAYNNNNRTG 1 cut(s) 789
SapI GCTCTTC 1 cut(s) 152
SaqAI TTAA 4 cut(s) 381, 603, 681, 966
Sau3AI GATC 5 cut(s) 138, 187, 394, 1087, 1228
Sau96I GGNCC 7 cut(s) 38, 117, 133, 210, 227, 833, 1031
SchI GAGTC 1 cut(s) 87
ScrFI CCNGG 7 cut(s) 51, 235, 262, 263, 567, 808, 1009
SfaNI GCATC 1 cut(s) 510
SfcI CTRYAG 1 cut(s) 1232
SfoI GGCGCC 1 cut(s) 304
SgrAI CRCCGGYG 1 cut(s) 299
SinI GGWCC 5 cut(s) 38, 117, 210, 227, 1031
SmaI CCCGGG 1 cut(s) 263
SmiMI CAYNNNNRTG 1 cut(s) 789
SmlI CTYRAG 2 cut(s) 341, 611
SmoI CTYRAG 2 cut(s) 341, 611
Sse9I AATT 2 cut(s) 1054, 1250
SspDI GGCGCC 1 cut(s) 302
SspMI CTAG 3 cut(s) 657, 663, 729
StyD4I CCNGG 7 cut(s) 49, 233, 260, 261, 565, 806, 1007
StyI CCWWGG 2 cut(s) 120, 836
TaaI ACNGT 2 cut(s) 826, 931
TaiI ACGT 3 cut(s) 330, 1070, 1156
TaqI TCGA 1 cut(s) 495
TasI AATT 2 cut(s) 1054, 1250
TauI GCSGC 4 cut(s) 201, 308, 338, 917
TfiI GAWTC 2 cut(s) 562, 631
Tru1I TTAA 4 cut(s) 381, 603, 681, 966
Tru9I TTAA 4 cut(s) 381, 603, 681, 966
TscAI CASTG 2 cut(s) 102, 990
TseFI GTSAC 2 cut(s) 295, 981
TseI GCWGC 6 cut(s) 424, 530, 637, 740, 972, 1295
Tsp45I GTSAC 2 cut(s) 295, 981
TspDTI ATGAA 2 cut(s) 436, 569
TspGWI ACGGA 3 cut(s) 166, 387, 1241
TspMI CCCGGG 1 cut(s) 261
TspRI CASTG 2 cut(s) 102, 990
Tth111I GACNNNGTC 1 cut(s) 359
Van91I CCANNNNNTGG 1 cut(s) 1157
VpaK11BI GGWCC 5 cut(s) 38, 117, 210, 227, 1031
XapI RAATTY 1 cut(s) 1250
XceI RCATGY 1 cut(s) 286
XmaI CCCGGG 1 cut(s) 261
XmnI GAANNNNTTC 1 cut(s) 1250
XspI CTAG 3 cut(s) 657, 663, 729
Zsp2I ATGCAT 1 cut(s) 525
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.