Rorug01G0207600

UDP-glucuronate 4-epimerase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
29294149 .. 29296529
2381 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0207600.1

Sequence Viewer

Length: 987 bp
ATGAGGTGCAAGAAGCACGCCGCCGACCTCACAAGCGCCGTCGGCGTCTGCGCCTCTTGTCTCCGGGAACGACTGACCGCCATCATCGAGGCCCAGACCCGAGCCCAGGCCCAATTACAACTCCAGGCTCAGCTCTCCCGCCTCCACTCCCGCAGCAACGGCGTCGCTCCCGAAGAACCCCTCAAGTCCGACCCCAACCCCCCGCCGCTCATCTTCCCCCGCTCCGTCTCCCCCTACGTTTCTCGCCGCAAATCCGACGACTCCGCCTGGCCGCACCACCACAATCGCTCCGATCACGATCACGACCACAACCACCAGCGCCATCATATTCGCTTCTACAGTACGCCCCAGGTGGGGCCTACCTACGACGGAGGAGCCGCCACTATCGGAGGCTCGTACAGGAAGAGCAAGCCCAAGTTTTCGCTCCTGACGAGTCTGTTCCGGTCCAGATCCGACAAGTTCTGGACGGATCCTAGGGTTTCGTCGCGGGACTCGACTTCGACGTCGGCGTCACCGTCGTGGTTCTCGACGATCTTCGCCGGGAAAAGAGGGAAGCAATCGAAGCAATTCTACTCCGACGAGTCCACGATCCGAGTGAGATCTCGCCACAGAAGAGCGCGCGGAATGTCGCCGGATTTAACGCACGACGCCGGCGGTGGCGGCTGCGAGGACGACTGCGACCGATCGGCCTCCGGCAGCGGGGACTCATCGACGCCGGATTGGAAGAGGACTCCGGTGCAGGCCACGCCGTCGCGGCGGACGCGTTCGGGTCCGGTTAAGAATGTGTCGGGTCTGACGTTCTGCCTGAGCCCGCTGGTTCGGGCCAGCCCGAACCCGCACTGGAACCAGAAGTGCATGCAGGGCTTCCCGGCCGAGGTTGGCGAGGTCAGGGTGGCGACGAAGCCACACTTGGCCACAGCGGCGTCGTTTAGCATGAACCGGTCGAGGAAGCTGGCTGATATCGGTAGAGCCACTTCCAACCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

328

Amino Acids

36.24

Weight (kDa)

10.35

Isoelectric Point (pI)

66.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 502, 508
AatII GACGTC 1 cut(s) 506
AccBSI CCGCTC 2 cut(s) 208, 222
AccII CGCG 5 cut(s) 487, 619, 621, 754, 763
AclWI GGATC 4 cut(s) 444, 464, 477, 583
AcoI YGGCCR 3 cut(s) 269, 870, 912
AcyI GRCGYC 7 cut(s) 45, 162, 503, 509, 648, 713, 923
AfaI GTAC 2 cut(s) 343, 398
AfiI CCNNNNNNNGG 5 cut(s) 106, 353, 354, 699, 874
AflIII ACRYGT 1 cut(s) 761
AgeI ACCGGT 1 cut(s) 939
AjnI CCWGG 4 cut(s) 105, 123, 266, 348
AjuI GAANNNNNNNTTGG 2 cut(s) 893, 925
AleI CACNNNNGTG 1 cut(s) 517
AluBI AGCT 2 cut(s) 133, 952
AluI AGCT 2 cut(s) 133, 952
Alw26I GTCTC 2 cut(s) 65, 232
AlwI GGATC 4 cut(s) 444, 464, 477, 583
Ama87I CYCGRG 1 cut(s) 99
AoxI GGCC 9 cut(s) 90, 108, 269, 356, 687, 741, 822, 870, 912
ApeKI GCWGC 3 cut(s) 153, 663, 696
AsiGI ACCGGT 1 cut(s) 939
Asp700I GAANNNNTTC 1 cut(s) 566
AspA2I CCTAGG 1 cut(s) 473
AspLEI GCGC 5 cut(s) 38, 53, 321, 619, 621
AspS9I GGNCC 6 cut(s) 91, 109, 356, 444, 770, 822
AsuC2I CCSGG 3 cut(s) 65, 541, 869
AsuHPI GGTGA 1 cut(s) 504
AvaI CYCGRG 1 cut(s) 99
AvaII GGWCC 2 cut(s) 444, 770
AvrII CCTAGG 1 cut(s) 473
BalI TGGCCA 1 cut(s) 914
BamHI GGATCC 1 cut(s) 469
BanII GRGCYC 2 cut(s) 106, 812
BarI GAAGNNNNNNTAC 3 cut(s) 554, 586, 958
BbvI GCAGC 3 cut(s) 165, 650, 708
BccI CCATC 2 cut(s) 89, 330
BceAI ACGGC 3 cut(s) 23, 175, 733
BcgI CGANNNNNNTGC 2 cut(s) 145, 179
BciT130I CCWGG 4 cut(s) 107, 125, 268, 350
BcnI CCSGG 3 cut(s) 65, 541, 869
BcoDI GTCTC 2 cut(s) 65, 232
BfaI CTAG 1 cut(s) 474
BfmI CTRYAG 1 cut(s) 337
BfoI RGCGCY 2 cut(s) 39, 322
BglI GCCNNNNNGGC 2 cut(s) 754, 920
BglII AGATCT 1 cut(s) 599
BlnI CCTAGG 1 cut(s) 473
BlpI GCTNAGC 1 cut(s) 129
Bme1390I CCNGG 7 cut(s) 65, 107, 125, 268, 350, 541, 869
Bme18I GGWCC 2 cut(s) 444, 770
BmeT110I CYCGRG 1 cut(s) 99
BmgT120I GGNCC 6 cut(s) 91, 109, 356, 444, 770, 822
BmiI GGNNCC 5 cut(s) 357, 376, 471, 771, 845
BmrFI CCNGG 7 cut(s) 65, 107, 125, 268, 350, 541, 869
BpmI CTGGAG 1 cut(s) 107
Bpu10I CCTNAGC 1 cut(s) 806
Bpu1102I GCTNAGC 1 cut(s) 129
BpuEI CTTGAG 1 cut(s) 167
BpuMI CCSGG 3 cut(s) 65, 541, 869
BsaBI GATNNNNATC 1 cut(s) 297
BsaHI GRCGYC 7 cut(s) 45, 162, 503, 509, 648, 713, 923
BsaJI CCNNGG 4 cut(s) 105, 348, 473, 873
BsaWI WCCGGW 4 cut(s) 441, 733, 772, 939
BsaXI ACNNNNNCTCC 2 cut(s) 272, 302
Bsc4I CCNNNNNNNGG 5 cut(s) 106, 353, 354, 699, 874
Bse118I RCCGGY 2 cut(s) 650, 939
Bse1I ACTGG 1 cut(s) 845
Bse8I GATNNNNATC 1 cut(s) 297
BseBI CCWGG 4 cut(s) 107, 125, 268, 350
BseDI CCNNGG 4 cut(s) 105, 348, 473, 873
BseJI GATNNNNATC 1 cut(s) 297
BseLI CCNNNNNNNGG 5 cut(s) 106, 353, 354, 699, 874
BseMII CTCAG 2 cut(s) 143, 797
BseNI ACTGG 1 cut(s) 845
BsePI GCGCGC 1 cut(s) 617
BseRI GAGGAG 1 cut(s) 387
BseX3I CGGCCG 1 cut(s) 870
BseXI GCAGC 3 cut(s) 165, 650, 708
BsgI GTGCAG 1 cut(s) 758
Bsh1236I CGCG 5 cut(s) 487, 619, 621, 754, 763
Bsh1285I CGRYCG 4 cut(s) 682, 686, 873, 944
BshFI GGCC 9 cut(s) 92, 110, 271, 358, 689, 743, 824, 872, 914
BshTI ACCGGT 1 cut(s) 939
BsiEI CGRYCG 4 cut(s) 682, 686, 873, 944
BsiHKCI CYCGRG 1 cut(s) 99
BslFI GGGAC 2 cut(s) 503, 716
BslI CCNNNNNNNGG 5 cut(s) 106, 353, 354, 699, 874
BsmAI GTCTC 2 cut(s) 65, 232
BsmBI CGTCTC 1 cut(s) 232
BsmFI GGGAC 2 cut(s) 503, 716
BsnI GGCC 9 cut(s) 92, 110, 271, 358, 689, 743, 824, 872, 914
BsoBI CYCGRG 1 cut(s) 99
Bsp1286I GDGCHC 2 cut(s) 106, 812
Bsp143I GATC 8 cut(s) 292, 298, 449, 469, 531, 588, 599, 683
Bsp1720I GCTNAGC 1 cut(s) 129
BspANI GGCC 9 cut(s) 92, 110, 271, 358, 689, 743, 824, 872, 914
BspCNI CTCAG 2 cut(s) 142, 798
BspFNI CGCG 5 cut(s) 487, 619, 621, 754, 763
BspLI GGNNCC 5 cut(s) 357, 376, 471, 771, 845
BspPI GGATC 4 cut(s) 444, 464, 477, 583
BspQI GCTCTTC 2 cut(s) 398, 607
BsrBI CCGCTC 2 cut(s) 208, 222
BsrFI RCCGGY 2 cut(s) 650, 939
BsrI ACTGG 1 cut(s) 845
BssAI RCCGGY 2 cut(s) 650, 939
BssECI CCNNGG 4 cut(s) 105, 348, 473, 873
BssHII GCGCGC 1 cut(s) 617
BssMI GATC 8 cut(s) 292, 298, 449, 469, 531, 588, 599, 683
BssNI GRCGYC 7 cut(s) 45, 162, 503, 509, 648, 713, 923
BssT1I CCWWGG 1 cut(s) 473
Bst2UI CCWGG 4 cut(s) 107, 125, 268, 350
Bst4CI ACNGT 3 cut(s) 341, 516, 983
Bst6I CTCTTC 3 cut(s) 398, 607, 719
BstACI GRCGYC 7 cut(s) 45, 162, 503, 509, 648, 713, 923
BstC8I GCNNGC 9 cut(s) 18, 410, 619, 652, 741, 812, 826, 857, 954
BstDEI CTNAG 2 cut(s) 129, 806
BstFNI CGCG 5 cut(s) 487, 619, 621, 754, 763
BstH2I RGCGCY 2 cut(s) 39, 322
BstHHI GCGC 5 cut(s) 38, 53, 321, 619, 621
BstKTI GATC 8 cut(s) 295, 301, 452, 472, 534, 591, 602, 686
BstMAI GTCTC 2 cut(s) 65, 232
BstMBI GATC 8 cut(s) 292, 298, 449, 469, 531, 588, 599, 683
BstMCI CGRYCG 4 cut(s) 682, 686, 873, 944
BstMWI GCNNNNNNNGC 9 cut(s) 42, 159, 562, 660, 745, 754, 760, 861, 920
BstNI CCWGG 4 cut(s) 107, 125, 268, 350
BstNSI RCATGY 1 cut(s) 859
BstSCI CCNGG 7 cut(s) 63, 105, 123, 266, 348, 539, 867
BstSFI CTRYAG 1 cut(s) 337
BstUI CGCG 5 cut(s) 487, 619, 621, 754, 763
BstV1I GCAGC 3 cut(s) 165, 650, 708
BstX2I RGATCY 3 cut(s) 449, 469, 599
BstYI RGATCY 3 cut(s) 449, 469, 599
BstZI CGGCCG 1 cut(s) 870
BsuRI GGCC 9 cut(s) 92, 110, 271, 358, 689, 743, 824, 872, 914
BtsIMutI CAGTG 1 cut(s) 838
Cac8I GCNNGC 9 cut(s) 18, 410, 619, 652, 741, 812, 826, 857, 954
CfoI GCGC 5 cut(s) 38, 53, 321, 619, 621
Cfr10I RCCGGY 2 cut(s) 650, 939
Cfr13I GGNCC 6 cut(s) 91, 109, 356, 444, 770, 822
CseI GACGC 7 cut(s) 34, 151, 498, 656, 721, 769, 912
Csp6I GTAC 2 cut(s) 342, 397
CspAI ACCGGT 1 cut(s) 939
CviAII CATG 2 cut(s) 856, 934
CviQI GTAC 2 cut(s) 342, 397
DdeI CTNAG 2 cut(s) 129, 806
DpnI GATC 8 cut(s) 294, 300, 451, 471, 533, 590, 601, 685
DpnII GATC 8 cut(s) 292, 298, 449, 469, 531, 588, 599, 683
DrdI GACNNNNNNGTC 2 cut(s) 502, 508
DseDI GACNNNNNNGTC 2 cut(s) 502, 508
EaeI YGGCCR 3 cut(s) 269, 870, 912
EagI CGGCCG 1 cut(s) 870
Eam1104I CTCTTC 3 cut(s) 398, 607, 719
EarI CTCTTC 3 cut(s) 398, 607, 719
EciI GGCGGA 2 cut(s) 253, 772
EclXI CGGCCG 1 cut(s) 870
Eco130I CCWWGG 1 cut(s) 473
Eco24I GRGCYC 2 cut(s) 106, 812
Eco32I GATATC 1 cut(s) 961
Eco47I GGWCC 2 cut(s) 444, 770
Eco52I CGGCCG 1 cut(s) 870
Eco88I CYCGRG 1 cut(s) 99
EcoO109I RGGNCCY 1 cut(s) 356
EcoRII CCWGG 4 cut(s) 105, 123, 266, 348
EcoRV GATATC 1 cut(s) 961
EcoT14I CCWWGG 1 cut(s) 473
EcoT38I GRGCYC 2 cut(s) 106, 812
ErhI CCWWGG 1 cut(s) 473
Esp3I CGTCTC 1 cut(s) 232
FaeI CATG 2 cut(s) 859, 937
FaiI YATR 3 cut(s) 327, 857, 935
FalI AAGNNNNNCTT 2 cut(s) 893, 925
FaqI GGGAC 2 cut(s) 503, 716
FatI CATG 2 cut(s) 855, 933
FauI CCCGC 8 cut(s) 146, 158, 210, 227, 480, 692, 819, 843
FriOI GRGCYC 2 cut(s) 106, 812
FspBI CTAG 1 cut(s) 474
GlaI GCGC 5 cut(s) 37, 52, 320, 618, 620
GsuI CTGGAG 1 cut(s) 107
HaeII RGCGCY 2 cut(s) 39, 322
HaeIII GGCC 9 cut(s) 92, 110, 271, 358, 689, 743, 824, 872, 914
HgaI GACGC 7 cut(s) 34, 151, 498, 656, 721, 769, 912
HhaI GCGC 5 cut(s) 38, 53, 321, 619, 621
Hin1I GRCGYC 7 cut(s) 45, 162, 503, 509, 648, 713, 923
Hin1II CATG 2 cut(s) 859, 937
Hin6I GCGC 5 cut(s) 36, 51, 319, 617, 619
HinP1I GCGC 5 cut(s) 36, 51, 319, 617, 619
HinfI GANTC 6 cut(s) 260, 433, 491, 581, 704, 730
HphI GGTGA 1 cut(s) 504
Hpy166II GTNNAC 1 cut(s) 585
Hpy188I TCNGA 8 cut(s) 190, 256, 292, 389, 454, 577, 593, 795
Hpy188III TCNNGA 7 cut(s) 170, 296, 302, 427, 447, 463, 526
Hpy8I GTNNAC 1 cut(s) 585
HpyCH4III ACNGT 3 cut(s) 341, 516, 983
HpyCH4IV ACGT 3 cut(s) 237, 503, 797
HpyCH4V TGCA 4 cut(s) 9, 739, 855, 859
HpyF10VI GCNNNNNNNGC 9 cut(s) 42, 159, 562, 660, 745, 754, 760, 861, 920
HpyF3I CTNAG 2 cut(s) 129, 806
HpySE526I ACGT 3 cut(s) 237, 503, 797
Hsp92I GRCGYC 7 cut(s) 45, 162, 503, 509, 648, 713, 923
Hsp92II CATG 2 cut(s) 859, 937
HspAI GCGC 5 cut(s) 36, 51, 319, 617, 619
KroI GCCGGC 1 cut(s) 650
KroNI GCCGGC 1 cut(s) 652
Kzo9I GATC 8 cut(s) 292, 298, 449, 469, 531, 588, 599, 683
LguI GCTCTTC 2 cut(s) 398, 607
LmnI GCTCC 5 cut(s) 172, 227, 293, 374, 429
Lsp1109I GCAGC 3 cut(s) 165, 650, 708
MaeI CTAG 1 cut(s) 474
MaeII ACGT 3 cut(s) 237, 503, 797
MaeIII GTNAC 1 cut(s) 510
MalI GATC 8 cut(s) 294, 300, 451, 471, 533, 590, 601, 685
MbiI CCGCTC 2 cut(s) 208, 222
MboI GATC 8 cut(s) 292, 298, 449, 469, 531, 588, 599, 683
MboII GAAGA 6 cut(s) 185, 205, 415, 526, 624, 736
MflI RGATCY 3 cut(s) 449, 469, 599
MhlI GDGCHC 2 cut(s) 106, 812
MlsI TGGCCA 1 cut(s) 914
MluCI AATT 2 cut(s) 113, 566
MluI ACGCGT 1 cut(s) 761
MluNI TGGCCA 1 cut(s) 914
MlyI GAGTC 6 cut(s) 254, 442, 485, 590, 698, 724
MmeI TCCRAC 4 cut(s) 213, 279, 477, 600
Mox20I TGGCCA 1 cut(s) 914
MreI CGCCGGCG 1 cut(s) 650
MroNI GCCGGC 1 cut(s) 650
MroXI GAANNNNTTC 1 cut(s) 566
MscI TGGCCA 1 cut(s) 914
MseI TTAA 2 cut(s) 638, 777
MslI CAYNNNNRTG 1 cut(s) 517
Msp20I TGGCCA 1 cut(s) 914
MspA1I CMGCKG 3 cut(s) 699, 814, 920
MspR9I CCNGG 7 cut(s) 65, 107, 125, 268, 350, 541, 869
MvaI CCWGG 4 cut(s) 107, 125, 268, 350
MvnI CGCG 5 cut(s) 487, 619, 621, 754, 763
MwoI GCNNNNNNNGC 9 cut(s) 42, 159, 562, 660, 745, 754, 760, 861, 920
NaeI GCCGGC 1 cut(s) 652
NciI CCSGG 3 cut(s) 65, 541, 869
NdeII GATC 8 cut(s) 292, 298, 449, 469, 531, 588, 599, 683
NgoMIV GCCGGC 1 cut(s) 650
NlaIII CATG 2 cut(s) 859, 937
NlaIV GGNNCC 5 cut(s) 357, 376, 471, 771, 845
NmeAIII GCCGAG 1 cut(s) 898
NmuCI GTSAC 1 cut(s) 510
NspI RCATGY 1 cut(s) 859
OliI CACNNNNGTG 1 cut(s) 517
PaeI GCATGC 1 cut(s) 859
PauI GCGCGC 1 cut(s) 617
PciSI GCTCTTC 2 cut(s) 398, 607
PcsI WCGNNNNNNNCGW 7 cut(s) 428, 491, 500, 506, 512, 524, 794
PdiI GCCGGC 1 cut(s) 652
PdmI GAANNNNTTC 1 cut(s) 566
PfoI TCCNGGA 1 cut(s) 63
PinAI ACCGGT 1 cut(s) 939
Ple19I CGATCG 1 cut(s) 686
PleI GAGTC 6 cut(s) 254, 441, 485, 589, 698, 724
PpsI GAGTC 6 cut(s) 254, 441, 485, 589, 698, 724
Psp6I CCWGG 4 cut(s) 105, 123, 266, 348
PspGI CCWGG 4 cut(s) 105, 123, 266, 348
PspN4I GGNNCC 5 cut(s) 357, 376, 471, 771, 845
PspPI GGNCC 6 cut(s) 91, 109, 356, 444, 770, 822
PsuI RGATCY 3 cut(s) 449, 469, 599
PteI GCGCGC 1 cut(s) 617
PvuI CGATCG 1 cut(s) 686
RsaI GTAC 2 cut(s) 343, 398
RsaNI GTAC 2 cut(s) 342, 397
RseI CAYNNNNRTG 1 cut(s) 517
SapI GCTCTTC 2 cut(s) 398, 607
SaqAI TTAA 2 cut(s) 638, 777
Sau3AI GATC 8 cut(s) 292, 298, 449, 469, 531, 588, 599, 683
Sau96I GGNCC 6 cut(s) 91, 109, 356, 444, 770, 822
SchI GAGTC 6 cut(s) 254, 442, 485, 590, 698, 724
ScrFI CCNGG 7 cut(s) 65, 107, 125, 268, 350, 541, 869
SduI GDGCHC 2 cut(s) 106, 812
SfcI CTRYAG 1 cut(s) 337
SgrAI CRCCGGYG 1 cut(s) 650
SinI GGWCC 2 cut(s) 444, 770
SmiMI CAYNNNNRTG 1 cut(s) 517
SmlI CTYRAG 1 cut(s) 182
SmoI CTYRAG 1 cut(s) 182
SphI GCATGC 1 cut(s) 859
Sse9I AATT 2 cut(s) 113, 566
SspMI CTAG 1 cut(s) 474
StyD4I CCNGG 7 cut(s) 63, 105, 123, 266, 348, 539, 867
StyI CCWWGG 1 cut(s) 473
TaaI ACNGT 3 cut(s) 341, 516, 983
TaiI ACGT 3 cut(s) 240, 506, 800
TaqI TCGA 7 cut(s) 87, 494, 500, 527, 560, 710, 944
TaqII GACCGA 1 cut(s) 696
TasI AATT 2 cut(s) 113, 566
TauI GCSGC 8 cut(s) 23, 208, 249, 274, 380, 663, 757, 923
Tru1I TTAA 2 cut(s) 638, 777
Tru9I TTAA 2 cut(s) 638, 777
TscAI CASTG 1 cut(s) 845
TseFI GTSAC 1 cut(s) 510
TseI GCWGC 3 cut(s) 153, 663, 696
Tsp45I GTSAC 1 cut(s) 510
TspDTI ATGAA 1 cut(s) 950
TspGWI ACGGA 3 cut(s) 214, 384, 482
TspRI CASTG 1 cut(s) 845
VpaK11BI GGWCC 2 cut(s) 444, 770
XceI RCATGY 1 cut(s) 859
XmaJI CCTAGG 1 cut(s) 473
XmnI GAANNNNTTC 1 cut(s) 566
XspI CTAG 1 cut(s) 474
ZraI GACGTC 1 cut(s) 504
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.