FvH4_7g11970

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0014366
Physical Location & Seq
Forward (+)
10900038 .. 10903283
3246 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g11970.t1

Sequence Viewer

Length: 1905 bp
ATGAATCCCCAGAAAACAGAGGAAGATCTCTTCCACCACCACCATTTCCACCACCACCTCCACAACCATGATCTGGACCCACCGCCCGCGATCGTCCAATCCCAGCCGTCCATCAACGACGTCGTCGTCGAGCCCTTGTTCACTCCCCTCCCCGAAATCGACCTCTTCCGCTCCTCCTCCCCCTCCTCCTCCCCGGCCCACTCCTCCTCCGAAAACGACGACGTTTCCAACCCTAACCCTAGCGAGGTAACCGCCGTGAAATCCACGCCTCTCTACATCAGCCCGGAGCCGCACATCTCGTCGCAGTTCTACACCTTCAACCTGGAGTCCCACTCCCTGATGATCCGCTGCCTCATGGAGGCCCGCCTCGCGACGCCGGCCGAGATCCGCGACGCCACCCCCGGCGACGTCCTCAAGTCGTGGCGCGCCGTCTGGAAGGACCGGAACGAGGACACGGCTTACGTCACGGCGTGGAAGCGCATCCAGGACAAGCTCTCGGCGCACCTGGACCAAAACGGTAACGAGTTTCTGTGCTTCAAGAACAATACTCAGCAATTCGTTTCGCACATTAATCAGTGGCAGGATATTGTTATGGCTTTTCATAGTGACACCGATTTGAAACACCTGGGGCTTAAGGAAACTATTGATCGGATTAAGCAGGTCTGGACTGTAGGTGCTAAGTTTTACGGCATTCCCGAGAGTTACATTAGGGTCTGTGTCGCCGCCTGCCCCGTGTGTTCCTCCGCCTCGTCGGGGCTCTCGGCCAGGAACAAGCGGCGGCGGTTTGAGTATACCGAGTCGTTTGATGTGCCGGCCAAGGAGGTGCCGCATAAGCTTCAGCAGTTGGCTGCGAAGCATAAGGTGGTGCTCTGCATTAGGCAGAAGTATATTAGGTATAAGCCGTTTATGGCTGAGGTTAAGGACTATGCTTGCCACAGGGCGGGCGAGCCGGCTGCTAAGAAGAGTAAGATACTGAAGAGGGAGCCGTATGCGTCGAAGCGGTGCGGTTGTGGGTTCAGGATTAGGGCTATTGTTCCTATTACGAATTATAACGAGAAGGACAAGACGTTTGTGTATCAAGAAGAGGGGGTGGCCGTGTTTAAACTGTATGCGGTGCATTCGGGGCATGAGCCGGGGCCGTTGGATGGGAATGCGAGGATTATGCATCGTGTTGTGGGGAACAAAGGTGGGTTTTTGATGGATCAAGAAACTGTGTATGGGGTAAGTGATGAGTTTGATAGTGAGGGGTTTGGATTGTTGGGGAAGGAGGAAGGGGATTTGCACCATTCAGTTTTGCAGCAGGTGAAGGAGTTGAGAGCTGAAGTTGGGTGTTTAGAAGAGAAACTTACAAAAATCCCACAAGAGCTTTTGGGATCAGTGTCTCGAGAATTGTTTGATATTATGAATAAAGTTAGACATATAGGCGAGGGAAGTTCGAAGACGATGGGTTTGCTCCAGGACAAGCCAGAATCAGATGATATTTTGGTGGGGGAGAATGATTTGGCACATTGGGACCACCATGAACGGCTATATGGAGATGGACAGGATGCTGATTTGATTGAGGATGATGAAGATAGTTTTGGGCGAACTCTTGGGGATGTTGTCCCTTGGGAGCAGATGAGGACAGAATGTAGGAGTCAGAAGGATCTGATCAGTGAGGCTTGTAAGCCTGGGAAGTGGTTGAAATGCAGTGACTTTGACGAAAAGAGCATCCTTGATTGCCAGGATACTAAACTAACCAAGCCCTTATCACAAGACGAGAGTATAGTGACAGATGTAGGTCTTATTGGTTTACAGGTTGATAGCTTCTACCAAGGGAGTTCTAAATGGTATGATTCTCCTTGTGGGCTAGACCCAGGTGCAGATTGTGGGGATAGTGCGTTCAGGCATGGGGGGATTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

635

Amino Acids

71.44

Weight (kDa)

5.68

Isoelectric Point (pI)

52.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014366)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G60850
fragaria_vesca FvH4_7g11970
malus_domestica MD02G1203100.v1.1 MD07G1123000.v1.1
prunus_persica Prupe.2G146400_v2.0.a1
pyrus_communis pycom02g16600 pycom07g11140
rosa_chinensis RchiOBHm_Chr1g0350691
rosa_laevigata RLG00000028463
rosa_multiflora Rmu_sc0002150.1_g000003
rosa_roxburghii Rroxscaffold_4G00304600
rosa_rugosa Rorug01G0213100
rosa_samantha Rh1AG227400 Rh1BG196900 Rh1CG212300 Rh1DG224800
rosa_wichuraiana Rw1G019690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1050
AarI CACCTGC 1 cut(s) 1291
AasI GACNNNNNNGTC 1 cut(s) 125
AatII GACGTC 2 cut(s) 123, 411
Acc36I ACCTGC 2 cut(s) 649, 1291
AccB1I GGYRCC 1 cut(s) 823
AccB7I CCANNNNNTGG 1 cut(s) 73
AccBSI CCGCTC 1 cut(s) 171
AccI GTMKAC 1 cut(s) 791
AccII CGCG 4 cut(s) 89, 371, 390, 426
AclWI GGATC 5 cut(s) 337, 379, 1209, 1381, 1653
AcoI YGGCCR 4 cut(s) 378, 762, 813, 1092
AcuI CTGAAG 3 cut(s) 821, 995, 1341
AcyI GRCGYC 4 cut(s) 120, 374, 393, 408
AdeI CACNNNGTG 1 cut(s) 471
AfiI CCNNNNNNNGG 7 cut(s) 73, 244, 358, 448, 753, 940, 1145
AflII CTTAAG 1 cut(s) 632
AgsI TTSAA 4 cut(s) 319, 538, 619, 1684
AjnI CCWGG 9 cut(s) 321, 483, 504, 624, 764, 1455, 1669, 1722, 1855
AjuI GAANNNNNNNTTGG 2 cut(s) 1563, 1595
AloI GAACNNNNNNTCC 2 cut(s) 1865, 1897
AluBI AGCT 5 cut(s) 493, 835, 1319, 1366, 1806
AluI AGCT 5 cut(s) 493, 835, 1319, 1366, 1806
Alw21I GWGCWC 1 cut(s) 870
Alw26I GTCTC 1 cut(s) 1386
AlwI GGATC 5 cut(s) 337, 379, 1209, 1381, 1653
Ama87I CYCGRG 2 cut(s) 695, 1383
AoxI GGCC 7 cut(s) 195, 360, 378, 762, 813, 1092, 1136
ApeKI GCWGC 4 cut(s) 348, 848, 953, 1297
ArsI GACNNNNNNTTYG 4 cut(s) 1052, 1084, 1432, 1464
AscI GGCGCGCC 1 cut(s) 424
AseI ATTAAT 1 cut(s) 570
AspLEI GCGC 4 cut(s) 426, 428, 480, 502
AspS9I GGNCC 7 cut(s) 76, 196, 361, 439, 508, 1136, 1513
AsuC2I CCSGG 4 cut(s) 194, 284, 402, 1134
AsuHPI GGTGA 1 cut(s) 1315
AsuII TTCGAA 1 cut(s) 1436
AvaI CYCGRG 2 cut(s) 695, 1383
AvaII GGWCC 4 cut(s) 76, 439, 508, 1513
BanI GGYRCC 1 cut(s) 823
BanII GRGCYC 2 cut(s) 135, 759
BbsI GAAGAC 1 cut(s) 1445
Bbv12I GWGCWC 1 cut(s) 870
BbvCI CCTCAGC 1 cut(s) 912
BbvI GCAGC 4 cut(s) 335, 835, 940, 1309
BccI CCATC 5 cut(s) 119, 1139, 1192, 1438, 1532
BcgI CGANNNNNNTGC 6 cut(s) 935, 969, 1144, 1178, 1432, 1466
BciT130I CCWGG 9 cut(s) 323, 485, 506, 626, 766, 1457, 1671, 1724, 1857
BciVI GTATCC 1 cut(s) 1720
BclI TGATCA 1 cut(s) 1650
BcnI CCSGG 4 cut(s) 194, 284, 402, 1134
BcoDI GTCTC 1 cut(s) 1386
BfaI CTAG 2 cut(s) 240, 1850
BfmI CTRYAG 1 cut(s) 669
BfrI CTTAAG 1 cut(s) 632
BfuAI ACCTGC 2 cut(s) 649, 1291
BfuI GTATCC 1 cut(s) 1720
BglII AGATCT 1 cut(s) 25
BisI GCNGC 9 cut(s) 290, 349, 723, 776, 779, 827, 849, 954, 1298
BlsI GCNGC 9 cut(s) 291, 350, 724, 777, 780, 828, 850, 955, 1299
Bme18I GGWCC 4 cut(s) 76, 439, 508, 1513
BmeT110I CYCGRG 2 cut(s) 695, 1383
BmgT120I GGNCC 7 cut(s) 76, 196, 361, 439, 508, 1136, 1513
BmiI GGNNCC 6 cut(s) 78, 288, 825, 984, 1137, 1514
BmsI GCATC 4 cut(s) 489, 1174, 1537, 1719
BpiI GAAGAC 1 cut(s) 1445
BplI GAGNNNNNCTC 2 cut(s) 317, 349
BpmI CTGGAG 2 cut(s) 344, 1439
Bpu10I CCTNAGC 1 cut(s) 912
Bpu14I TTCGAA 1 cut(s) 1436
BpuEI CTTGAG 1 cut(s) 398
BpuMI CCSGG 4 cut(s) 194, 284, 402, 1134
BsaHI GRCGYC 4 cut(s) 120, 374, 393, 408
BsaJI CCNNGG 9 cut(s) 192, 400, 625, 816, 1133, 1607, 1670, 1813, 1855
BsaWI WCCGGW 1 cut(s) 441
BsaXI ACNNNNNCTCC 2 cut(s) 191, 221
Bsc4I CCNNNNNNNGG 7 cut(s) 73, 244, 358, 448, 753, 940, 1145
Bse118I RCCGGY 3 cut(s) 376, 811, 949
BseBI CCWGG 9 cut(s) 323, 485, 506, 626, 766, 1457, 1671, 1724, 1857
BseDI CCNNGG 9 cut(s) 192, 400, 625, 816, 1133, 1607, 1670, 1813, 1855
BseGI GGATG 6 cut(s) 480, 1150, 1552, 1570, 1603, 1710
BseLI CCNNNNNNNGG 7 cut(s) 73, 244, 358, 448, 753, 940, 1145
BseMII CTCAG 2 cut(s) 563, 903
BsePI GCGCGC 1 cut(s) 424
BseRI GAGGAG 6 cut(s) 163, 166, 175, 178, 193, 196
BseX3I CGGCCG 1 cut(s) 378
BseXI GCAGC 4 cut(s) 335, 835, 940, 1309
BseYI CCCAGC 1 cut(s) 102
BsgI GTGCAG 1 cut(s) 1881
Bsh1236I CGCG 4 cut(s) 89, 371, 390, 426
Bsh1285I CGRYCG 2 cut(s) 93, 381
BshFI GGCC 7 cut(s) 197, 362, 380, 764, 815, 1094, 1138
BshNI GGYRCC 1 cut(s) 823
BsiEI CGRYCG 2 cut(s) 93, 381
BsiHKAI GWGCWC 1 cut(s) 870
BsiHKCI CYCGRG 2 cut(s) 695, 1383
BsiSI CCGG 8 cut(s) 194, 284, 377, 402, 442, 812, 950, 1133
BslFI GGGAC 3 cut(s) 313, 1526, 1589
BslI CCNNNNNNNGG 7 cut(s) 73, 244, 358, 448, 753, 940, 1145
BsmAI GTCTC 1 cut(s) 1386
BsmFI GGGAC 3 cut(s) 313, 1526, 1589
BsmI GAATGC 3 cut(s) 690, 1117, 1156
BsnI GGCC 7 cut(s) 197, 362, 380, 764, 815, 1094, 1138
BsoBI CYCGRG 2 cut(s) 695, 1383
Bsp119I TTCGAA 1 cut(s) 1436
Bsp1286I GDGCHC 3 cut(s) 135, 759, 870
Bsp68I TCGCGA 1 cut(s) 371
BspANI GGCC 7 cut(s) 197, 362, 380, 764, 815, 1094, 1138
BspCNI CTCAG 2 cut(s) 562, 904
BspFNI CGCG 4 cut(s) 89, 371, 390, 426
BspLI GGNNCC 6 cut(s) 78, 288, 825, 984, 1137, 1514
BspMI ACCTGC 2 cut(s) 649, 1291
BspPI GGATC 5 cut(s) 337, 379, 1209, 1381, 1653
BspT104I TTCGAA 1 cut(s) 1436
BspT107I GGYRCC 1 cut(s) 823
BspTI CTTAAG 1 cut(s) 632
BsrBI CCGCTC 1 cut(s) 171
BsrFI RCCGGY 3 cut(s) 376, 811, 949
BssAI RCCGGY 3 cut(s) 376, 811, 949
BssECI CCNNGG 9 cut(s) 192, 400, 625, 816, 1133, 1607, 1670, 1813, 1855
BssHII GCGCGC 1 cut(s) 424
BssNAI GTATAC 1 cut(s) 792
BssNI GRCGYC 4 cut(s) 120, 374, 393, 408
BssT1I CCWWGG 3 cut(s) 816, 1607, 1813
Bst1107I GTATAC 1 cut(s) 792
Bst2UI CCWGG 9 cut(s) 323, 485, 506, 626, 766, 1457, 1671, 1724, 1857
Bst4CI ACNGT 4 cut(s) 518, 670, 1107, 1213
Bst6I CTCTTC 6 cut(s) 35, 170, 956, 971, 1077, 1332
BstACI GRCGYC 4 cut(s) 120, 374, 393, 408
BstAFI CTTAAG 1 cut(s) 632
BstBI TTCGAA 1 cut(s) 1436
BstDEI CTNAG 4 cut(s) 549, 678, 912, 957
BstEII GGTNACC 1 cut(s) 247
BstENI CCTNNNNNAGG 1 cut(s) 356
BstF5I GGATG 6 cut(s) 480, 1150, 1552, 1570, 1603, 1710
BstFNI CGCG 4 cut(s) 89, 371, 390, 426
BstHHI GCGC 4 cut(s) 426, 428, 480, 502
BstMAI GTCTC 1 cut(s) 1386
BstMCI CGRYCG 2 cut(s) 93, 381
BstMWI GCNNNNNNNGC 5 cut(s) 368, 377, 499, 832, 1123
BstNI CCWGG 9 cut(s) 323, 485, 506, 626, 766, 1457, 1671, 1724, 1857
BstPI GGTNACC 1 cut(s) 247
BstSFI CTRYAG 1 cut(s) 669
BstUI CGCG 4 cut(s) 89, 371, 390, 426
BstV1I GCAGC 4 cut(s) 335, 835, 940, 1309
BstV2I GAAGAC 1 cut(s) 1445
BstX2I RGATCY 3 cut(s) 25, 384, 1645
BstYI RGATCY 3 cut(s) 25, 384, 1645
BstZ17I GTATAC 1 cut(s) 792
BstZI CGGCCG 1 cut(s) 378
BsuI GTATCC 1 cut(s) 1720
BsuRI GGCC 7 cut(s) 197, 362, 380, 764, 815, 1094, 1138
BtsCI GGATG 6 cut(s) 480, 1150, 1552, 1570, 1603, 1710
BtsI GCAGTG 1 cut(s) 1696
BtsIMutI CAGTG 4 cut(s) 581, 1383, 1660, 1696
BtuMI TCGCGA 1 cut(s) 371
BveI ACCTGC 2 cut(s) 649, 1291
CfoI GCGC 4 cut(s) 426, 428, 480, 502
Cfr10I RCCGGY 3 cut(s) 376, 811, 949
Cfr13I GGNCC 7 cut(s) 76, 196, 361, 439, 508, 1136, 1513
CseI GACGC 3 cut(s) 382, 401, 981
CviAII CATG 5 cut(s) 68, 355, 1127, 1520, 1889
DdeI CTNAG 4 cut(s) 549, 678, 912, 957
DraI TTTAAA 1 cut(s) 1102
DraIII CACNNNGTG 1 cut(s) 471
DrdI GACNNNNNNGTC 1 cut(s) 125
DseDI GACNNNNNNGTC 1 cut(s) 125
EaeI YGGCCR 4 cut(s) 378, 762, 813, 1092
EagI CGGCCG 1 cut(s) 378
Eam1104I CTCTTC 6 cut(s) 35, 170, 956, 971, 1077, 1332
EarI CTCTTC 6 cut(s) 35, 170, 956, 971, 1077, 1332
EciI GGCGGA 1 cut(s) 733
EclXI CGGCCG 1 cut(s) 378
Eco130I CCWWGG 3 cut(s) 816, 1607, 1813
Eco24I GRGCYC 2 cut(s) 135, 759
Eco47I GGWCC 4 cut(s) 76, 439, 508, 1513
Eco52I CGGCCG 1 cut(s) 378
Eco57I CTGAAG 3 cut(s) 821, 995, 1341
Eco88I CYCGRG 2 cut(s) 695, 1383
Eco91I GGTNACC 1 cut(s) 247
EcoNI CCTNNNNNAGG 1 cut(s) 356
EcoO65I GGTNACC 1 cut(s) 247
EcoRII CCWGG 9 cut(s) 321, 483, 504, 624, 764, 1455, 1669, 1722, 1855
EcoT14I CCWWGG 3 cut(s) 816, 1607, 1813
EcoT22I ATGCAT 1 cut(s) 1167
EcoT38I GRGCYC 2 cut(s) 135, 759
ErhI CCWWGG 3 cut(s) 816, 1607, 1813
FaeI CATG 5 cut(s) 71, 358, 1130, 1523, 1892
FalI AAGNNNNNCTT 2 cut(s) 1329, 1361
FaqI GGGAC 3 cut(s) 313, 1526, 1589
FatI CATG 5 cut(s) 67, 354, 1126, 1519, 1888
FauI CCCGC 3 cut(s) 94, 371, 934
FbaI TGATCA 1 cut(s) 1650
FblI GTMKAC 1 cut(s) 791
Fnu4HI GCNGC 9 cut(s) 290, 349, 723, 776, 779, 827, 849, 954, 1298
FokI GGATG 6 cut(s) 467, 1157, 1559, 1577, 1610, 1697
FriOI GRGCYC 2 cut(s) 135, 759
Fsp4HI GCNGC 9 cut(s) 290, 349, 723, 776, 779, 827, 849, 954, 1298
FspBI CTAG 2 cut(s) 240, 1850
GlaI GCGC 4 cut(s) 425, 427, 479, 501
GluI GCNGC 9 cut(s) 290, 349, 723, 776, 779, 827, 849, 954, 1298
GsaI CCCAGC 1 cut(s) 106
GsuI CTGGAG 2 cut(s) 344, 1439
HaeIII GGCC 7 cut(s) 197, 362, 380, 764, 815, 1094, 1138
HapII CCGG 8 cut(s) 194, 284, 377, 402, 442, 812, 950, 1133
HgaI GACGC 3 cut(s) 382, 401, 981
HhaI GCGC 4 cut(s) 426, 428, 480, 502
Hin1I GRCGYC 4 cut(s) 120, 374, 393, 408
Hin1II CATG 5 cut(s) 71, 358, 1130, 1523, 1892
Hin6I GCGC 4 cut(s) 424, 426, 478, 500
HinP1I GCGC 4 cut(s) 424, 426, 478, 500
HindIII AAGCTT 1 cut(s) 833
HinfI GANTC 6 cut(s) 4, 326, 797, 1469, 1636, 1835
HpaII CCGG 8 cut(s) 194, 284, 377, 402, 442, 812, 950, 1133
HphI GGTGA 1 cut(s) 1315
Hpy166II GTNNAC 3 cut(s) 141, 792, 1793
Hpy188I TCNGA 5 cut(s) 211, 651, 1474, 1641, 1650
Hpy8I GTNNAC 3 cut(s) 141, 792, 1793
HpyAV CCTTC 7 cut(s) 325, 430, 1051, 1258, 1265, 1300, 1636
HpyCH4III ACNGT 4 cut(s) 518, 670, 1107, 1213
HpyCH4IV ACGT 5 cut(s) 120, 222, 408, 462, 1067
HpyCH4V TGCA 7 cut(s) 873, 1117, 1165, 1282, 1297, 1689, 1862
HpyF10VI GCNNNNNNNGC 5 cut(s) 368, 377, 499, 832, 1123
HpyF3I CTNAG 4 cut(s) 549, 678, 912, 957
HpySE526I ACGT 5 cut(s) 120, 222, 408, 462, 1067
Hsp92I GRCGYC 4 cut(s) 120, 374, 393, 408
Hsp92II CATG 5 cut(s) 71, 358, 1130, 1523, 1892
HspAI GCGC 4 cut(s) 424, 426, 478, 500
KroI GCCGGC 3 cut(s) 376, 811, 949
KroNI GCCGGC 3 cut(s) 378, 813, 951
Ksp22I TGATCA 1 cut(s) 1650
LmnI GCTCC 5 cut(s) 176, 286, 982, 1458, 1612
Lsp1109I GCAGC 4 cut(s) 335, 835, 940, 1309
LweI GCATC 4 cut(s) 489, 1174, 1537, 1719
MaeI CTAG 2 cut(s) 240, 1850
MaeII ACGT 5 cut(s) 120, 222, 408, 462, 1067
MaeIII GTNAC 7 cut(s) 247, 463, 518, 605, 701, 1691, 1768
MbiI CCGCTC 1 cut(s) 171
MboII GAAGA 9 cut(s) 22, 35, 157, 973, 988, 1094, 1349, 1450, 1583
MflI RGATCY 3 cut(s) 25, 384, 1645
MhlI GDGCHC 3 cut(s) 135, 759, 870
MluCI AATT 3 cut(s) 554, 1045, 1388
MlyI GAGTC 3 cut(s) 335, 806, 1645
MmeI TCCRAC 2 cut(s) 252, 1122
Mph1103I ATGCAT 1 cut(s) 1167
MroNI GCCGGC 3 cut(s) 376, 811, 949
MseI TTAA 5 cut(s) 570, 633, 654, 918, 1101
MslI CAYNNNNRTG 1 cut(s) 66
MspA1I CMGCKG 1 cut(s) 348
MspCI CTTAAG 1 cut(s) 632
MspI CCGG 8 cut(s) 194, 284, 377, 402, 442, 812, 950, 1133
MssI GTTTAAAC 1 cut(s) 1102
Mva1269I GAATGC 3 cut(s) 690, 1117, 1156
MvaI CCWGG 9 cut(s) 323, 485, 506, 626, 766, 1457, 1671, 1724, 1857
MvnI CGCG 4 cut(s) 89, 371, 390, 426
MwoI GCNNNNNNNGC 5 cut(s) 368, 377, 499, 832, 1123
NaeI GCCGGC 3 cut(s) 378, 813, 951
NciI CCSGG 4 cut(s) 194, 284, 402, 1134
NgoMIV GCCGGC 3 cut(s) 376, 811, 949
NlaIII CATG 5 cut(s) 71, 358, 1130, 1523, 1892
NlaIV GGNNCC 6 cut(s) 78, 288, 825, 984, 1137, 1514
NmeAIII GCCGAG 3 cut(s) 406, 476, 740
NmuCI GTSAC 4 cut(s) 463, 605, 1691, 1768
NruI TCGCGA 1 cut(s) 371
NsiI ATGCAT 1 cut(s) 1167
NspV TTCGAA 1 cut(s) 1436
PaeR7I CTCGAG 1 cut(s) 1383
PalAI GGCGCGCC 1 cut(s) 424
PaqCI CACCTGC 1 cut(s) 1291
PauI GCGCGC 1 cut(s) 424
PcsI WCGNNNNNNNCGW 3 cut(s) 123, 126, 693
PctI GAATGC 3 cut(s) 690, 1117, 1156
PdiI GCCGGC 3 cut(s) 378, 813, 951
PfeI GAWTC 3 cut(s) 4, 1469, 1835
PflFI GACNNNGTC 1 cut(s) 122
PflMI CCANNNNNTGG 1 cut(s) 73
PfoI TCCNGGA 2 cut(s) 483, 1455
PkrI GCNGC 9 cut(s) 291, 350, 724, 777, 780, 828, 850, 955, 1299
Ple19I CGATCG 1 cut(s) 93
PleI GAGTC 3 cut(s) 334, 805, 1644
PmeI GTTTAAAC 1 cut(s) 1102
PpsI GAGTC 3 cut(s) 334, 805, 1644
PshBI ATTAAT 1 cut(s) 570
PsiI TTATAA 1 cut(s) 1050
Psp6I CCWGG 9 cut(s) 321, 483, 504, 624, 764, 1455, 1669, 1722, 1855
PspEI GGTNACC 1 cut(s) 247
PspFI CCCAGC 1 cut(s) 102
PspGI CCWGG 9 cut(s) 321, 483, 504, 624, 764, 1455, 1669, 1722, 1855
PspN4I GGNNCC 6 cut(s) 78, 288, 825, 984, 1137, 1514
PspPI GGNCC 7 cut(s) 76, 196, 361, 439, 508, 1136, 1513
PsuI RGATCY 3 cut(s) 25, 384, 1645
PsyI GACNNNGTC 1 cut(s) 122
PteI GCGCGC 1 cut(s) 424
PvuI CGATCG 1 cut(s) 93
RruI TCGCGA 1 cut(s) 371
RseI CAYNNNNRTG 1 cut(s) 66
SaqAI TTAA 5 cut(s) 570, 633, 654, 918, 1101
SatI GCNGC 9 cut(s) 290, 349, 723, 776, 779, 827, 849, 954, 1298
Sau96I GGNCC 7 cut(s) 76, 196, 361, 439, 508, 1136, 1513
SchI GAGTC 3 cut(s) 335, 806, 1645
SduI GDGCHC 3 cut(s) 135, 759, 870
SfaNI GCATC 4 cut(s) 489, 1174, 1537, 1719
SfcI CTRYAG 1 cut(s) 669
Sfr274I CTCGAG 1 cut(s) 1383
SfuI TTCGAA 1 cut(s) 1436
SgsI GGCGCGCC 1 cut(s) 424
SinI GGWCC 4 cut(s) 76, 439, 508, 1513
SlaI CTCGAG 1 cut(s) 1383
SmiMI CAYNNNNRTG 1 cut(s) 66
SmlI CTYRAG 3 cut(s) 413, 632, 1383
SmoI CTYRAG 3 cut(s) 413, 632, 1383
Sse9I AATT 3 cut(s) 554, 1045, 1388
SspMI CTAG 2 cut(s) 240, 1850
StyI CCWWGG 3 cut(s) 816, 1607, 1813
TaaI ACNGT 4 cut(s) 518, 670, 1107, 1213
TaiI ACGT 5 cut(s) 123, 225, 411, 465, 1070
TaqI TCGA 5 cut(s) 129, 159, 995, 1384, 1436
TasI AATT 3 cut(s) 554, 1045, 1388
TauI GCSGC 5 cut(s) 292, 725, 778, 781, 829
TfiI GAWTC 3 cut(s) 4, 1469, 1835
Tru1I TTAA 5 cut(s) 570, 633, 654, 918, 1101
Tru9I TTAA 5 cut(s) 570, 633, 654, 918, 1101
TscAI CASTG 4 cut(s) 581, 1383, 1660, 1696
TseFI GTSAC 4 cut(s) 463, 605, 1691, 1768
TseI GCWGC 4 cut(s) 348, 848, 953, 1297
Tsp45I GTSAC 4 cut(s) 463, 605, 1691, 1768
TspDTI ATGAA 5 cut(s) 17, 590, 1418, 1536, 1584
TspRI CASTG 4 cut(s) 581, 1383, 1660, 1696
Tth111I GACNNNGTC 1 cut(s) 122
Van91I CCANNNNNTGG 1 cut(s) 73
Vha464I CTTAAG 1 cut(s) 632
VpaK11BI GGWCC 4 cut(s) 76, 439, 508, 1513
VspI ATTAAT 1 cut(s) 570
XagI CCTNNNNNAGG 1 cut(s) 356
XhoI CTCGAG 1 cut(s) 1383
XmiI GTMKAC 1 cut(s) 791
XspI CTAG 2 cut(s) 240, 1850
ZraI GACGTC 2 cut(s) 121, 409
Zsp2I ATGCAT 1 cut(s) 1167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.