RLG00000028463

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0014366
Physical Location & Seq
Reverse (-)
23088902 .. 23092344
3443 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028463

Sequence Viewer

Length: 2304 bp
ATGCATCCATTCTTCTGCCTTCTCGCAATCCTCGCCATCCTCCACCCTCTAGCGGCCGCAGCACGTAGTGGAATAACCGGTGGATGGAAGCTGATTAAGGACATCAACGACCCACACGTGAAGGAGATCGAGGAGTTCGCAGTGTCGAAGTACAATAAGAAATCCAGGAAGAAGTTGGAGTTTCAAAGCTTGTTGAAAGACGAAACTCAGAGAGACTCAAACCCCATAAGAGAGAGGAGAAGAACCAAAGAAATATTACACTGTGGGGGTGACGACCTTTTCAAACTCTACACCCACACCTTCTTCTTCTTCTTCTTCCTCCTCAATCTCATGAATCCCCACAAAACAGAGGAAGACCTCTTCCACCATCACCACCACCACCACCATTTCCACCACCACCTTCACAACCATGATCTGGACCCACCGCATCCTCCTCCTCCTCCTCCCCCGATCGTCCAATCCGAGCCGTCCATTCCCCTCCCGCAAAACGACGTCGTCCTCGAGCCGCTGTTCACTCCTCTCCCCGAAATCGACCTCTTCCGCTCCTCCTCCACCTCCTCCTCCCCGGCCCACTCCTCCTCCGAAAACGAAAACGACGACGTTTCGAACCCTAAACCTAGCTCGGCCCCGAGCAACAACGCCGCCGCGATGAAATCCACGCCGCTCTACATCAGCCCGGAGCCGCACATCTCGTCGCAGTTCTACACCTTCAATCTGGAGTCTCACTCCCTCATGATCCGCTGCCTCATGGAGGCCCGCCTCGCCACCCCAGCCGAGATCCGCGACGCCACCCCCGCCGACGTGCTCAAGTCCTGGCGCGCCGTCTGGAAGGACCGGAACGAGGACACCGCTTACGTCACGGCCTGGAAGCGCATCCAGGACAAGCTCTCGGCGCACCTCGACCAAAACGGTAACGAATTTCTGTGCTTCAAGAACAATACTCAGCAATTCGTTTCGCACATTAATCAGTGGCAGGATATTGTTATGGCTTTTCATAGTGATACCGATTTGAAACACTTGGGGCTTAAGGAAACCGTTGATAGGATTAAGCAGGTTTGGACTGTAGGTGCTAAGTTTTACGGCATTCCTGAGAGTTATATTAGAGTCTGTGTTGCTGCGTGTCCTGTGTGTTCTTCCGCCTCCTCGGGGCTTTCGGCTAGGAATAAGAGGCGGCGGTTTGAGTATACGGAGTCATTTGATGTGCCGGCAAAGGAGGTGCCACATAAGCTGCAGCAGCTGGCTGCAAAGCATAAGGTGGTGCTTTGCATTAGGCAGAAGTATATTAGGTATAAGCCGTTTATGGCTGAGGTTAAGGACTATGCTTGCCACAGGGCGGGTGAGCCGGCTGCGAAGAAGTCCAAGATACTGAAGAGGGAGCCCTATGCCTCAAAGAGGTGTGGGTGTGGGTTTCGGATTAGGGCCATTGTTCCTATTACAAATTATAATGAGAAGGACAAGACGTTTGTGTATCAGGAAGAGGGGGTGGCCGTGTTTAAGTTGTATGCTGTGCATTCTGGGCATGAGCCGGGCCCGCTGGATGGGAATGCGAGGATTATGCATCGGGTTGTGGGCCACAAAGGTGGGTTTTTGATGGATCAAGATACTGTGTATGGGGTGAGTGATGAGTTTGATAACGAGGGGTTTGGATTGTTGGGGAAGGATGAAGGGGATTTGCACCATTCAGTTTTGCAGCAGGTGAAGGAGTTGAGAGCTGAAGTTGGGTGTTTAGAAGAGAAAATTGCAAAAATCCCACTAGAGCTTTTGGGATCAGTGTCTCGAGAATTGTTTGATATTGTGAATAAAGTTAGACATATAGGTGAGGGAAGTTCGAAGACAATGGGATTGCTCCAGGACAAGCCAGAATCAGATGATATTTTGGTCGGGGAGAATGATTTGGCACATTGGACTGATAACCACCATGATCGTCTATATGGAGATGGTCAGGACGCTGATTTGATTGAGGATGATGAAGATAGTTTTGGGCGAACTCTTGGGGATGTTGTCCCTTGGGAACAGATGAGGACAGAGTGTAGGAGTCAGAAGGATCTGATCAGTGAAGCTTGTAAGCCTGGGAAGTGGTTGAAATGCAGTGACTTCGATGAAAAGAGCATCCTTGATTGCCAGGATACTAAACTAACCAAGCCATTATCACAAGACGAGAGTATAGTGACAGATGTAGGTCTTATTGGTTTACAGGTTGATAGTTTCTACCAAGGGACTTCTAAATGGTATGATTCTCCTTGTGGGTTGGACCCAGGTGCGGATTGTGGGGATAGTGCATTCAGGCATGGGGGGATTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

768

Amino Acids

86.82

Weight (kDa)

6.14

Isoelectric Point (pI)

50.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SQAPI PF16845 32 - 70 2.9e-08 Aspartic acid proteinase inhibitor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014366)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G60850
fragaria_vesca FvH4_7g11970
malus_domestica MD02G1203100.v1.1 MD07G1123000.v1.1
prunus_persica Prupe.2G146400_v2.0.a1
pyrus_communis pycom02g16600 pycom07g11140
rosa_chinensis RchiOBHm_Chr1g0350691
rosa_laevigata RLG00000028463
rosa_multiflora Rmu_sc0002150.1_g000003
rosa_roxburghii Rroxscaffold_4G00304600
rosa_rugosa Rorug01G0213100
rosa_samantha Rh1AG227400 Rh1BG196900 Rh1CG212300 Rh1DG224800
rosa_wichuraiana Rw1G019690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1443
AarI CACCTGC 1 cut(s) 1684
AatII GACGTC 1 cut(s) 495
Acc36I ACCTGC 2 cut(s) 1042, 1684
AccB1I GGYRCC 1 cut(s) 1216
AccB7I CCANNNNNTGG 1 cut(s) 415
AccBSI CCGCTC 2 cut(s) 543, 664
AccI GTMKAC 1 cut(s) 1184
AccII CGCG 3 cut(s) 647, 783, 819
AclWI GGATC 5 cut(s) 730, 772, 1602, 1774, 2052
AcoI YGGCCR 2 cut(s) 54, 1485
AcsI RAATTY 1 cut(s) 917
AcuI CTGAAG 2 cut(s) 1388, 1734
AcvI CACGTG 1 cut(s) 118
AcyI GRCGYC 2 cut(s) 492, 786
AdeI CACNNNGTG 1 cut(s) 68
AfaI GTAC 1 cut(s) 152
AflII CTTAAG 1 cut(s) 1025
AflIII ACRYGT 1 cut(s) 115
AgeI ACCGGT 1 cut(s) 77
AgsI TTSAA 7 cut(s) 185, 196, 283, 712, 931, 1012, 2083
AjiI CACGTC 1 cut(s) 802
AjnI CCWGG 8 cut(s) 164, 812, 863, 876, 1848, 2068, 2121, 2254
AjuI GAANNNNNNNTTGG 2 cut(s) 1962, 1994
AleI CACNNNNGTG 1 cut(s) 1578
AluBI AGCT 9 cut(s) 91, 189, 621, 886, 1228, 1237, 1712, 1759, 2060
AluI AGCT 9 cut(s) 91, 189, 621, 886, 1228, 1237, 1712, 1759, 2060
Alw21I GWGCWC 1 cut(s) 807
Alw26I GTCTC 3 cut(s) 207, 726, 1779
AlwI GGATC 5 cut(s) 730, 772, 1602, 1774, 2052
AlwNI CAGNNNCTG 1 cut(s) 1237
Ama87I CYCGRG 4 cut(s) 500, 628, 1144, 1776
AoxI GGCC 9 cut(s) 54, 567, 624, 753, 861, 1419, 1485, 1528, 1570
ApaI GGGCCC 1 cut(s) 1532
ApeKI GCWGC 9 cut(s) 59, 741, 1115, 1228, 1231, 1234, 1241, 1346, 1690
ApoI RAATTY 1 cut(s) 917
ArsI GACNNNNNNTTYG 2 cut(s) 1445, 1477
AscI GGCGCGCC 1 cut(s) 817
AseI ATTAAT 1 cut(s) 963
AsiGI ACCGGT 1 cut(s) 77
AspLEI GCGC 4 cut(s) 819, 821, 873, 895
AsuC2I CCSGG 3 cut(s) 566, 677, 1527
AsuHPI GGTGA 6 cut(s) 281, 362, 1349, 1627, 1708, 1829
AsuII TTCGAA 2 cut(s) 605, 1829
AvaI CYCGRG 4 cut(s) 500, 628, 1144, 1776
AvaII GGWCC 3 cut(s) 418, 832, 2251
BaeGI GKGCMC 1 cut(s) 1532
BanI GGYRCC 1 cut(s) 1216
BanII GRGCYC 2 cut(s) 1380, 1532
BbrPI CACGTG 1 cut(s) 118
BbsI GAAGAC 2 cut(s) 360, 1838
Bbv12I GWGCWC 1 cut(s) 807
BbvCI CCTCAGC 1 cut(s) 1305
BbvI GCAGC 9 cut(s) 71, 728, 1102, 1215, 1228, 1243, 1246, 1333, 1702
BccI CCATC 6 cut(s) 44, 78, 375, 1532, 1585, 1931
BceAI ACGGC 6 cut(s) 451, 806, 876, 1096, 1279, 1472
BcgI CGANNNNNNTGC 4 cut(s) 1537, 1571, 2077, 2111
BciT130I CCWGG 8 cut(s) 166, 814, 865, 878, 1850, 2070, 2123, 2256
BciVI GTATCC 1 cut(s) 2119
BclI TGATCA 1 cut(s) 2049
BcnI CCSGG 3 cut(s) 566, 677, 1527
BcoDI GTCTC 3 cut(s) 207, 726, 1779
BfaI CTAG 4 cut(s) 50, 618, 1158, 1754
BfmI CTRYAG 2 cut(s) 1062, 1229
BfrI CTTAAG 1 cut(s) 1025
BfuAI ACCTGC 2 cut(s) 1042, 1684
BfuI GTATCC 1 cut(s) 2119
Bme18I GGWCC 3 cut(s) 418, 832, 2251
BmeT110I CYCGRG 4 cut(s) 500, 628, 1144, 1776
BmgBI CACGTC 1 cut(s) 802
BmiI GGNNCC 7 cut(s) 420, 627, 681, 1218, 1377, 1530, 2253
BmsI GCATC 5 cut(s) 13, 436, 882, 1567, 2118
BpiI GAAGAC 2 cut(s) 360, 1838
BplI GAGNNNNNCTC 2 cut(s) 710, 742
BpmI CTGGAG 2 cut(s) 737, 1832
Bpu10I CCTNAGC 1 cut(s) 1305
Bpu14I TTCGAA 2 cut(s) 605, 1829
BpuEI CTTGAG 1 cut(s) 791
BpuMI CCSGG 3 cut(s) 566, 677, 1527
BsaAI YACGTR 2 cut(s) 65, 118
BsaHI GRCGYC 2 cut(s) 492, 786
BsaJI CCNNGG 6 cut(s) 564, 1143, 2006, 2069, 2212, 2254
BsaWI WCCGGW 2 cut(s) 77, 834
BsaXI ACNNNNNCTCC 2 cut(s) 563, 593
Bse118I RCCGGY 3 cut(s) 77, 1204, 1342
BseBI CCWGG 8 cut(s) 166, 814, 865, 878, 1850, 2070, 2123, 2256
BseDI CCNNGG 6 cut(s) 564, 1143, 2006, 2069, 2212, 2254
BseMII CTCAG 4 cut(s) 221, 956, 1080, 1296
BsePI GCGCGC 1 cut(s) 817
BseSI GKGCMC 1 cut(s) 1532
BseX3I CGGCCG 1 cut(s) 54
BseXI GCAGC 9 cut(s) 71, 728, 1102, 1215, 1228, 1243, 1246, 1333, 1702
BseYI CCCAGC 1 cut(s) 769
Bsh1236I CGCG 3 cut(s) 647, 783, 819
Bsh1285I CGRYCG 2 cut(s) 57, 453
BshFI GGCC 9 cut(s) 56, 569, 626, 755, 863, 1421, 1487, 1530, 1572
BshNI GGYRCC 1 cut(s) 1216
BshTI ACCGGT 1 cut(s) 77
BsiEI CGRYCG 2 cut(s) 57, 453
BsiHKAI GWGCWC 1 cut(s) 807
BsiHKCI CYCGRG 4 cut(s) 500, 628, 1144, 1776
BsiSI CCGG 7 cut(s) 78, 566, 677, 835, 1205, 1343, 1526
BslFI GGGAC 2 cut(s) 1988, 2230
BsmAI GTCTC 3 cut(s) 207, 726, 1779
BsmFI GGGAC 2 cut(s) 1988, 2230
BsmI GAATGC 4 cut(s) 1083, 1510, 1549, 2279
BsnI GGCC 9 cut(s) 56, 569, 626, 755, 863, 1421, 1487, 1530, 1572
BsoBI CYCGRG 4 cut(s) 500, 628, 1144, 1776
Bsp119I TTCGAA 2 cut(s) 605, 1829
Bsp120I GGGCCC 1 cut(s) 1528
Bsp1286I GDGCHC 3 cut(s) 807, 1380, 1532
BspANI GGCC 9 cut(s) 56, 569, 626, 755, 863, 1421, 1487, 1530, 1572
BspCNI CTCAG 4 cut(s) 220, 955, 1081, 1297
BspFNI CGCG 3 cut(s) 647, 783, 819
BspHI TCATGA 2 cut(s) 330, 732
BspLI GGNNCC 7 cut(s) 420, 627, 681, 1218, 1377, 1530, 2253
BspMAI CTGCAG 1 cut(s) 1233
BspMI ACCTGC 2 cut(s) 1042, 1684
BspPI GGATC 5 cut(s) 730, 772, 1602, 1774, 2052
BspT104I TTCGAA 2 cut(s) 605, 1829
BspT107I GGYRCC 1 cut(s) 1216
BspTI CTTAAG 1 cut(s) 1025
BsrBI CCGCTC 2 cut(s) 543, 664
BsrFI RCCGGY 3 cut(s) 77, 1204, 1342
BssAI RCCGGY 3 cut(s) 77, 1204, 1342
BssECI CCNNGG 6 cut(s) 564, 1143, 2006, 2069, 2212, 2254
BssHII GCGCGC 1 cut(s) 817
BssNAI GTATAC 1 cut(s) 1185
BssNI GRCGYC 2 cut(s) 492, 786
BssT1I CCWWGG 2 cut(s) 2006, 2212
Bst1107I GTATAC 1 cut(s) 1185
Bst2UI CCWGG 8 cut(s) 166, 814, 865, 878, 1850, 2070, 2123, 2256
Bst4CI ACNGT 5 cut(s) 263, 911, 1036, 1063, 1606
Bst6I CTCTTC 5 cut(s) 365, 542, 1364, 1470, 1725
BstACI GRCGYC 2 cut(s) 492, 786
BstAFI CTTAAG 1 cut(s) 1025
BstBAI YACGTR 2 cut(s) 65, 118
BstBI TTCGAA 2 cut(s) 605, 1829
BstC8I GCNNGC 7 cut(s) 757, 819, 1206, 1239, 1324, 1344, 1532
BstDEI CTNAG 5 cut(s) 207, 942, 1071, 1089, 1305
BstENI CCTNNNNNAGG 2 cut(s) 749, 1390
BstFNI CGCG 3 cut(s) 647, 783, 819
BstHHI GCGC 4 cut(s) 819, 821, 873, 895
BstMAI GTCTC 3 cut(s) 207, 726, 1779
BstMCI CGRYCG 2 cut(s) 57, 453
BstNI CCWGG 8 cut(s) 166, 814, 865, 878, 1850, 2070, 2123, 2256
BstSFI CTRYAG 2 cut(s) 1062, 1229
BstSLI GKGCMC 1 cut(s) 1532
BstUI CGCG 3 cut(s) 647, 783, 819
BstV1I GCAGC 9 cut(s) 71, 728, 1102, 1215, 1228, 1243, 1246, 1333, 1702
BstV2I GAAGAC 2 cut(s) 360, 1838
BstX2I RGATCY 2 cut(s) 777, 2044
BstXI CCANNNNNNTGG 1 cut(s) 1580
BstYI RGATCY 2 cut(s) 777, 2044
BstZ17I GTATAC 1 cut(s) 1185
BstZI CGGCCG 1 cut(s) 54
BsuI GTATCC 1 cut(s) 2119
BsuRI GGCC 9 cut(s) 56, 569, 626, 755, 863, 1421, 1487, 1530, 1572
BtgZI GCGATG 1 cut(s) 662
BtrI CACGTC 1 cut(s) 802
BtsI GCAGTG 2 cut(s) 147, 2095
BtsIMutI CAGTG 6 cut(s) 147, 259, 974, 1776, 2059, 2095
BveI ACCTGC 2 cut(s) 1042, 1684
Cac8I GCNNGC 7 cut(s) 757, 819, 1206, 1239, 1324, 1344, 1532
CaiI CAGNNNCTG 1 cut(s) 1237
CciI TCATGA 2 cut(s) 330, 732
CciNI GCGGCCGC 1 cut(s) 54
CfoI GCGC 4 cut(s) 819, 821, 873, 895
Cfr10I RCCGGY 3 cut(s) 77, 1204, 1342
CseI GACGC 2 cut(s) 794, 1955
Csp6I GTAC 1 cut(s) 151
CspAI ACCGGT 1 cut(s) 77
CviAII CATG 7 cut(s) 331, 410, 733, 748, 1520, 1919, 2288
CviQI GTAC 1 cut(s) 151
DdeI CTNAG 5 cut(s) 207, 942, 1071, 1089, 1305
DraIII CACNNNGTG 1 cut(s) 68
EaeI YGGCCR 2 cut(s) 54, 1485
EagI CGGCCG 1 cut(s) 54
Eam1104I CTCTTC 5 cut(s) 365, 542, 1364, 1470, 1725
EarI CTCTTC 5 cut(s) 365, 542, 1364, 1470, 1725
EciI GGCGGA 1 cut(s) 1126
EclXI CGGCCG 1 cut(s) 54
Eco130I CCWWGG 2 cut(s) 2006, 2212
Eco24I GRGCYC 2 cut(s) 1380, 1532
Eco47I GGWCC 3 cut(s) 418, 832, 2251
Eco52I CGGCCG 1 cut(s) 54
Eco57I CTGAAG 2 cut(s) 1388, 1734
Eco72I CACGTG 1 cut(s) 118
Eco88I CYCGRG 4 cut(s) 500, 628, 1144, 1776
EcoNI CCTNNNNNAGG 2 cut(s) 749, 1390
EcoRII CCWGG 8 cut(s) 164, 812, 863, 876, 1848, 2068, 2121, 2254
EcoT14I CCWWGG 2 cut(s) 2006, 2212
EcoT22I ATGCAT 2 cut(s) 6, 1560
EcoT38I GRGCYC 2 cut(s) 1380, 1532
ErhI CCWWGG 2 cut(s) 2006, 2212
FaeI CATG 7 cut(s) 334, 413, 736, 751, 1523, 1922, 2291
FaqI GGGAC 2 cut(s) 1988, 2230
FatI CATG 7 cut(s) 330, 409, 732, 747, 1519, 1918, 2287
FauI CCCGC 5 cut(s) 489, 764, 802, 1327, 1539
FbaI TGATCA 1 cut(s) 2049
FblI GTMKAC 1 cut(s) 1184
FokI GGATG 9 cut(s) 23, 96, 414, 860, 1550, 1673, 1976, 2009, 2096
FriOI GRGCYC 2 cut(s) 1380, 1532
FspBI CTAG 4 cut(s) 50, 618, 1158, 1754
GlaI GCGC 4 cut(s) 818, 820, 872, 894
GsaI CCCAGC 1 cut(s) 773
GsuI CTGGAG 2 cut(s) 737, 1832
HaeIII GGCC 9 cut(s) 56, 569, 626, 755, 863, 1421, 1487, 1530, 1572
HapII CCGG 7 cut(s) 78, 566, 677, 835, 1205, 1343, 1526
HgaI GACGC 2 cut(s) 794, 1955
HhaI GCGC 4 cut(s) 819, 821, 873, 895
Hin1I GRCGYC 2 cut(s) 492, 786
Hin1II CATG 7 cut(s) 334, 413, 736, 751, 1523, 1922, 2291
Hin6I GCGC 4 cut(s) 817, 819, 871, 893
HinP1I GCGC 4 cut(s) 817, 819, 871, 893
HindIII AAGCTT 2 cut(s) 187, 2058
HinfI GANTC 8 cut(s) 215, 334, 719, 1104, 1190, 1862, 2035, 2234
HpaII CCGG 7 cut(s) 78, 566, 677, 835, 1205, 1343, 1526
HphI GGTGA 6 cut(s) 281, 362, 1349, 1627, 1708, 1829
Hpy166II GTNNAC 3 cut(s) 513, 1185, 2192
Hpy188I TCNGA 7 cut(s) 210, 463, 583, 1413, 1867, 2040, 2049
Hpy8I GTNNAC 3 cut(s) 513, 1185, 2192
Hpy99I CGWCG 7 cut(s) 494, 497, 599, 602, 697, 788, 803
HpyCH4III ACNGT 5 cut(s) 263, 911, 1036, 1063, 1606
HpyCH4IV ACGT 7 cut(s) 64, 117, 492, 600, 801, 855, 1460
HpyF3I CTNAG 5 cut(s) 207, 942, 1071, 1089, 1305
HpySE526I ACGT 7 cut(s) 64, 117, 492, 600, 801, 855, 1460
Hsp92I GRCGYC 2 cut(s) 492, 786
Hsp92II CATG 7 cut(s) 334, 413, 736, 751, 1523, 1922, 2291
HspAI GCGC 4 cut(s) 817, 819, 871, 893
KroI GCCGGC 2 cut(s) 1204, 1342
KroNI GCCGGC 2 cut(s) 1206, 1344
Ksp22I TGATCA 1 cut(s) 2049
LmnI GCTCC 4 cut(s) 548, 679, 1375, 1851
Lsp1109I GCAGC 9 cut(s) 71, 728, 1102, 1215, 1228, 1243, 1246, 1333, 1702
LweI GCATC 5 cut(s) 13, 436, 882, 1567, 2118
MaeI CTAG 4 cut(s) 50, 618, 1158, 1754
MaeII ACGT 7 cut(s) 64, 117, 492, 600, 801, 855, 1460
MaeIII GTNAC 5 cut(s) 269, 856, 911, 2090, 2167
MbiI CCGCTC 2 cut(s) 543, 664
MflI RGATCY 2 cut(s) 777, 2044
MhlI GDGCHC 3 cut(s) 807, 1380, 1532
MluCI AATT 5 cut(s) 917, 947, 1438, 1737, 1781
MlyI GAGTC 5 cut(s) 209, 728, 1113, 1199, 2044
MmeI TCCRAC 2 cut(s) 156, 2229
Mph1103I ATGCAT 2 cut(s) 6, 1560
MroNI GCCGGC 2 cut(s) 1204, 1342
MseI TTAA 6 cut(s) 96, 963, 1026, 1047, 1311, 1494
MslI CAYNNNNRTG 3 cut(s) 408, 1578, 1815
MspA1I CMGCKG 4 cut(s) 508, 741, 1237, 1534
MspCI CTTAAG 1 cut(s) 1025
MspI CCGG 7 cut(s) 78, 566, 677, 835, 1205, 1343, 1526
Mva1269I GAATGC 4 cut(s) 1083, 1510, 1549, 2279
MvaI CCWGG 8 cut(s) 166, 814, 865, 878, 1850, 2070, 2123, 2256
MvnI CGCG 3 cut(s) 647, 783, 819
NaeI GCCGGC 2 cut(s) 1206, 1344
NciI CCSGG 3 cut(s) 566, 677, 1527
NgoMIV GCCGGC 2 cut(s) 1204, 1342
NlaIII CATG 7 cut(s) 334, 413, 736, 751, 1523, 1922, 2291
NlaIV GGNNCC 7 cut(s) 420, 627, 681, 1218, 1377, 1530, 2253
NmeAIII GCCGAG 3 cut(s) 602, 799, 869
NmuCI GTSAC 4 cut(s) 269, 856, 2090, 2167
NotI GCGGCCGC 1 cut(s) 54
NsiI ATGCAT 2 cut(s) 6, 1560
NspV TTCGAA 2 cut(s) 605, 1829
OliI CACNNNNGTG 1 cut(s) 1578
PaeR7I CTCGAG 2 cut(s) 500, 1776
PagI TCATGA 2 cut(s) 330, 732
PalAI GGCGCGCC 1 cut(s) 817
PaqCI CACCTGC 1 cut(s) 1684
PauI GCGCGC 1 cut(s) 817
PcsI WCGNNNNNNNCGW 4 cut(s) 114, 459, 498, 594
PctI GAATGC 4 cut(s) 1083, 1510, 1549, 2279
PdiI GCCGGC 2 cut(s) 1206, 1344
PfeI GAWTC 3 cut(s) 334, 1862, 2234
PflFI GACNNNGTC 1 cut(s) 494
PflMI CCANNNNNTGG 1 cut(s) 415
PfoI TCCNGGA 3 cut(s) 164, 876, 1848
PinAI ACCGGT 1 cut(s) 77
Ple19I CGATCG 1 cut(s) 453
PleI GAGTC 5 cut(s) 209, 727, 1112, 1198, 2043
PmaCI CACGTG 1 cut(s) 118
PmlI CACGTG 1 cut(s) 118
PpsI GAGTC 5 cut(s) 209, 727, 1112, 1198, 2043
Ppu21I YACGTR 2 cut(s) 65, 118
PshBI ATTAAT 1 cut(s) 963
PsiI TTATAA 1 cut(s) 1443
Psp6I CCWGG 8 cut(s) 164, 812, 863, 876, 1848, 2068, 2121, 2254
PspCI CACGTG 1 cut(s) 118
PspFI CCCAGC 1 cut(s) 769
PspGI CCWGG 8 cut(s) 164, 812, 863, 876, 1848, 2068, 2121, 2254
PspN4I GGNNCC 7 cut(s) 420, 627, 681, 1218, 1377, 1530, 2253
PspOMI GGGCCC 1 cut(s) 1528
PspXI VCTCGAGB 1 cut(s) 500
PstI CTGCAG 1 cut(s) 1233
PstNI CAGNNNCTG 1 cut(s) 1237
PsuI RGATCY 2 cut(s) 777, 2044
PsyI GACNNNGTC 1 cut(s) 494
PteI GCGCGC 1 cut(s) 817
PvuI CGATCG 1 cut(s) 453
PvuII CAGCTG 1 cut(s) 1237
RsaI GTAC 1 cut(s) 152
RsaNI GTAC 1 cut(s) 151
RseI CAYNNNNRTG 3 cut(s) 408, 1578, 1815
SaqAI TTAA 6 cut(s) 96, 963, 1026, 1047, 1311, 1494
SchI GAGTC 5 cut(s) 209, 728, 1113, 1199, 2044
SduI GDGCHC 3 cut(s) 807, 1380, 1532
SfaNI GCATC 5 cut(s) 13, 436, 882, 1567, 2118
SfcI CTRYAG 2 cut(s) 1062, 1229
Sfr274I CTCGAG 2 cut(s) 500, 1776
SfuI TTCGAA 2 cut(s) 605, 1829
SgsI GGCGCGCC 1 cut(s) 817
SinI GGWCC 3 cut(s) 418, 832, 2251
SlaI CTCGAG 2 cut(s) 500, 1776
SmiMI CAYNNNNRTG 3 cut(s) 408, 1578, 1815
SmlI CTYRAG 4 cut(s) 500, 806, 1025, 1776
SmoI CTYRAG 4 cut(s) 500, 806, 1025, 1776
Sse9I AATT 5 cut(s) 917, 947, 1438, 1737, 1781
SspI AATATT 1 cut(s) 255
SspMI CTAG 4 cut(s) 50, 618, 1158, 1754
StyI CCWWGG 2 cut(s) 2006, 2212
TaaI ACNGT 5 cut(s) 263, 911, 1036, 1063, 1606
TaiI ACGT 7 cut(s) 67, 120, 495, 603, 804, 858, 1463
TaqI TCGA 9 cut(s) 129, 146, 501, 531, 605, 900, 1777, 1829, 2097
TasI AATT 5 cut(s) 917, 947, 1438, 1737, 1781
TatI WGTACW 1 cut(s) 150
TauI GCSGC 8 cut(s) 56, 59, 508, 644, 647, 664, 685, 1174
TfiI GAWTC 3 cut(s) 334, 1862, 2234
Tru1I TTAA 6 cut(s) 96, 963, 1026, 1047, 1311, 1494
Tru9I TTAA 6 cut(s) 96, 963, 1026, 1047, 1311, 1494
TscAI CASTG 6 cut(s) 147, 266, 974, 1776, 2059, 2095
TseFI GTSAC 4 cut(s) 269, 856, 2090, 2167
TseI GCWGC 9 cut(s) 59, 741, 1115, 1228, 1231, 1234, 1241, 1346, 1690
Tsp45I GTSAC 4 cut(s) 269, 856, 2090, 2167
TspDTI ATGAA 6 cut(s) 347, 665, 983, 1677, 1983, 2115
TspGWI ACGGA 1 cut(s) 1202
TspRI CASTG 6 cut(s) 147, 266, 974, 1776, 2059, 2095
Tth111I GACNNNGTC 1 cut(s) 494
Van91I CCANNNNNTGG 1 cut(s) 415
Vha464I CTTAAG 1 cut(s) 1025
VpaK11BI GGWCC 3 cut(s) 418, 832, 2251
VspI ATTAAT 1 cut(s) 963
XagI CCTNNNNNAGG 2 cut(s) 749, 1390
XapI RAATTY 1 cut(s) 917
XcmI CCANNNNNNNNNTGG 1 cut(s) 172
XhoI CTCGAG 2 cut(s) 500, 1776
XmiI GTMKAC 1 cut(s) 1184
XspI CTAG 4 cut(s) 50, 618, 1158, 1754
ZraI GACGTC 1 cut(s) 493
Zsp2I ATGCAT 2 cut(s) 6, 1560
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.