Rh1CG212300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0014366
Physical Location & Seq
Forward (+)
45859389 .. 45863401
4013 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG212300.1

Sequence Viewer

Length: 1971 bp
ATGAATCCCCACAAAACAGAGGAAGACCTCTTCCACCATCACCACCACCACCACCATTTCCACCACCACCTCCACAACCATGATCTGGACCCACCGCATCCTCCCCCGATCGTCCAATCCGAGCCGTCCATTCCCCTCCCGCAAAACGACGCCGTCGTCGTCGTCGAGCCGTTGTTCACACCTCTCCCCGAAATCGACCTGTTCCGCTCCTCCTCCACCTCCTCCTCCCCGGCCCACTCCTCCTCCGAAAACGAAAACGACGACGTTTCGAACCCTAACCCTAGCTCGGCCCCGAGCAACAACGCCGCCGCCGCGATGAAATCCACGCCGCTCTACATCAGCCCGGAGCCGCACATCTCGTCGCAGTTCTACACCTTCAACCTGGAGTCCCACTCCCTCATGATCCGCTGCCTCATGGAGGCCCGCCTCGCCACCCCCGCCGAGATCCGCGACGCCACCCCCGCCGACGTGCTCAAGTCCTGGCGCGCCGTCTGGAAGGACCGCAACGAGGACACCGCTTACGTCACGGCCTGGAAGCGCATCCAGGACAAGCTCTCGGCGCACCTCGACCAAAACGGTAACGAATTTCTGTGCTTCAAGAACAATACTCAGCAATTCGTTTCGCACATTAATCAGTGGCAGGATATTGTTATGGCTTTTCATAGTGATACCGACTTGAAACACTTGGGGCTTAAGGAAACCATTGATAGGATTAAGCAGGTCTGGACTGTAGGTGCCAAGTTTTACGGCATTCCCGAGAGTTACATTAGAGTCTGTGTTGCTGCCTGTCCTGTGTGTTCTTCGGCCTCCTCGGGGCTTTCAGCCAGGAATAAGAGGCGGCGGTTTGAGTATACCGAGTCGTTTGATGTGCCGGCCAAGGAGGTGCCGCATAAGCTTCAGCAGCTGGCTGCAAAGCATAAGGTGGTGCTTTGCATTAGGCAGAAGTATATTAGGTATAAGCCGTTTATGGCTGAGGTTAAGGACTATGCTTGCCACAGGGCGGGTGAGCCGGCTGCGAAGAAGTCCAAGATACTGAAGAGGGAGCCCTATGCCTCGAAGAGGTGTGGGTGTGGGTTTCGGATTAGGGCCATTGTTCCTATTACAAATTATAATGAGAAGGACAAGACGTTTGTGTATCAGGAAGAGGGGATGGCTGTGTTTAAGTTGTATGCTGTGCATTCTGGGCATGAGCCGGGCCCGCTGGATGGGAATGCGAGGATTATGCATCGGGTTGTGGGCCACAAAGGTGGGTTTTTGATGGATCAAGATACTGTGTATGGGGTGAGTGATGAGTTTGATAACGAGGGGTTTGGATTGTTGGGGAAGGATGAAGGGGATTTGCACCATTCAGTTTTGCAGCAGGTGAAGGAGTTGAGAGCTGAAGTTGGGTGTTTAGAAGAGAAAATTGCAAAATTCCCACAAGAGCTTTTGGGATCAGTGTCTCGAGAATTGTTTGATATTGTGAATAAAGTTAGACATATAGGTGAGGGAAGTTCGAAGACGATGGGTTTGCTCCAGGACAAGCCAGAATCAGATGATATTTTGGTCGGGGAGAATGATTTGGCACATTGGACTGATAACCACCATGATCGTCTATATGGAGATGGACAGGACGCTGATTTGATTGAGGACGATGAAGATAGTTTTGGGCGAACTCTTGGGGATGTTGTCCCTTGGGAGCAGATGAGGACAGAGTGTAGGAGTCAGAAGGATCTGATCAGTGAAGCTTGTAAGCCTGGGAAGTGGTTGAAATGCAGTGACTTCGATGAAAAGAGCATCCTTGATTGCCAGGATACTAAACTAACCAAGCCCTTATCACAAGACGAGAGTATAGTGACAGATGTAGGTCTTATTGGTTTACAGGTTGATAGTTTCTACCAAGGGACTTCTAAATGGTATGATTCTCCTTGTGGGTTGGACCCAGGTGCGGATTGTGGGGATAGTGCATTCAGGCATGGGGGGATTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

656

Amino Acids

73.86

Weight (kDa)

5.82

Isoelectric Point (pI)

50.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014366)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G60850
fragaria_vesca FvH4_7g11970
malus_domestica MD02G1203100.v1.1 MD07G1123000.v1.1
prunus_persica Prupe.2G146400_v2.0.a1
pyrus_communis pycom02g16600 pycom07g11140
rosa_chinensis RchiOBHm_Chr1g0350691
rosa_laevigata RLG00000028463
rosa_multiflora Rmu_sc0002150.1_g000003
rosa_roxburghii Rroxscaffold_4G00304600
rosa_rugosa Rorug01G0213100
rosa_samantha Rh1AG227400 Rh1BG196900 Rh1CG212300 Rh1DG224800
rosa_wichuraiana Rw1G019690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1110
AarI CACCTGC 1 cut(s) 1351
AasI GACNNNNNNGTC 1 cut(s) 155
Acc36I ACCTGC 2 cut(s) 709, 1351
AccB1I GGYRCC 2 cut(s) 734, 883
AccB7I CCANNNNNTGG 1 cut(s) 85
AccBSI CCGCTC 2 cut(s) 207, 331
AccI GTMKAC 1 cut(s) 851
AccII CGCG 3 cut(s) 314, 450, 486
AclWI GGATC 5 cut(s) 397, 439, 1269, 1441, 1719
AcoI YGGCCR 1 cut(s) 873
AcsI RAATTY 2 cut(s) 584, 1412
AcuI CTGAAG 3 cut(s) 881, 1055, 1401
AcyI GRCGYC 2 cut(s) 150, 453
AflII CTTAAG 1 cut(s) 692
AgsI TTSAA 4 cut(s) 379, 598, 679, 1750
AjiI CACGTC 1 cut(s) 469
AjnI CCWGG 9 cut(s) 381, 479, 530, 543, 824, 1515, 1735, 1788, 1921
AjuI GAANNNNNNNTTGG 2 cut(s) 1629, 1661
AleI CACNNNNGTG 1 cut(s) 1245
AluBI AGCT 7 cut(s) 285, 553, 895, 904, 1379, 1426, 1727
AluI AGCT 7 cut(s) 285, 553, 895, 904, 1379, 1426, 1727
Alw21I GWGCWC 1 cut(s) 474
Alw26I GTCTC 1 cut(s) 1446
AlwI GGATC 5 cut(s) 397, 439, 1269, 1441, 1719
AlwNI CAGNNNCTG 1 cut(s) 904
Ama87I CYCGRG 4 cut(s) 292, 755, 811, 1443
AoxI GGCC 9 cut(s) 231, 288, 420, 528, 804, 873, 1086, 1195, 1237
ApaI GGGCCC 1 cut(s) 1199
ApeKI GCWGC 6 cut(s) 408, 782, 901, 908, 1013, 1357
ApoI RAATTY 2 cut(s) 584, 1412
ArsI GACNNNNNNTTYG 4 cut(s) 1112, 1144, 1492, 1524
AscI GGCGCGCC 1 cut(s) 484
AseI ATTAAT 1 cut(s) 630
AspLEI GCGC 4 cut(s) 486, 488, 540, 562
AsuC2I CCSGG 3 cut(s) 230, 344, 1194
AsuHPI GGTGA 5 cut(s) 32, 1016, 1294, 1375, 1496
AsuII TTCGAA 2 cut(s) 269, 1496
AvaI CYCGRG 4 cut(s) 292, 755, 811, 1443
AvaII GGWCC 3 cut(s) 88, 499, 1918
BaeGI GKGCMC 1 cut(s) 1199
BanI GGYRCC 2 cut(s) 734, 883
BanII GRGCYC 2 cut(s) 1047, 1199
BbsI GAAGAC 2 cut(s) 30, 1505
Bbv12I GWGCWC 1 cut(s) 474
BbvCI CCTCAGC 1 cut(s) 972
BbvI GCAGC 6 cut(s) 395, 769, 895, 913, 1000, 1369
BccI CCATC 6 cut(s) 45, 1144, 1199, 1252, 1498, 1598
BceAI ACGGC 7 cut(s) 109, 137, 154, 473, 543, 763, 946
BcgI CGANNNNNNTGC 6 cut(s) 1204, 1238, 1492, 1526, 1744, 1778
BciT130I CCWGG 9 cut(s) 383, 481, 532, 545, 826, 1517, 1737, 1790, 1923
BciVI GTATCC 1 cut(s) 1786
BclI TGATCA 1 cut(s) 1716
BcnI CCSGG 3 cut(s) 230, 344, 1194
BcoDI GTCTC 1 cut(s) 1446
BfaI CTAG 1 cut(s) 282
BfmI CTRYAG 1 cut(s) 729
BfrI CTTAAG 1 cut(s) 692
BfuAI ACCTGC 2 cut(s) 709, 1351
BfuI GTATCC 1 cut(s) 1786
Bme18I GGWCC 3 cut(s) 88, 499, 1918
BmeT110I CYCGRG 4 cut(s) 292, 755, 811, 1443
BmgBI CACGTC 1 cut(s) 469
BmiI GGNNCC 8 cut(s) 90, 291, 348, 736, 885, 1044, 1197, 1920
BmsI GCATC 4 cut(s) 106, 549, 1234, 1785
BpiI GAAGAC 2 cut(s) 30, 1505
BplI GAGNNNNNCTC 2 cut(s) 377, 409
BpmI CTGGAG 2 cut(s) 404, 1499
Bpu10I CCTNAGC 1 cut(s) 972
Bpu14I TTCGAA 2 cut(s) 269, 1496
BpuEI CTTGAG 1 cut(s) 458
BpuMI CCSGG 3 cut(s) 230, 344, 1194
BsaHI GRCGYC 2 cut(s) 150, 453
BsaJI CCNNGG 7 cut(s) 228, 810, 876, 1673, 1736, 1879, 1921
BsaXI ACNNNNNCTCC 2 cut(s) 227, 257
Bse118I RCCGGY 2 cut(s) 871, 1009
BseBI CCWGG 9 cut(s) 383, 481, 532, 545, 826, 1517, 1737, 1790, 1923
BseDI CCNNGG 7 cut(s) 228, 810, 876, 1673, 1736, 1879, 1921
BseGI GGATG 7 cut(s) 97, 540, 1155, 1210, 1333, 1669, 1776
BseMII CTCAG 2 cut(s) 623, 963
BsePI GCGCGC 1 cut(s) 484
BseRI GAGGAG 7 cut(s) 199, 202, 211, 214, 229, 232, 799
BseSI GKGCMC 1 cut(s) 1199
BseXI GCAGC 6 cut(s) 395, 769, 895, 913, 1000, 1369
Bsh1236I CGCG 3 cut(s) 314, 450, 486
Bsh1285I CGRYCG 1 cut(s) 111
BshFI GGCC 9 cut(s) 233, 290, 422, 530, 806, 875, 1088, 1197, 1239
BshNI GGYRCC 2 cut(s) 734, 883
BsiEI CGRYCG 1 cut(s) 111
BsiHKAI GWGCWC 1 cut(s) 474
BsiHKCI CYCGRG 4 cut(s) 292, 755, 811, 1443
BsiSI CCGG 5 cut(s) 230, 344, 872, 1010, 1193
BslFI GGGAC 3 cut(s) 373, 1655, 1897
BsmAI GTCTC 1 cut(s) 1446
BsmFI GGGAC 3 cut(s) 373, 1655, 1897
BsmI GAATGC 4 cut(s) 750, 1177, 1216, 1946
BsnI GGCC 9 cut(s) 233, 290, 422, 530, 806, 875, 1088, 1197, 1239
BsoBI CYCGRG 4 cut(s) 292, 755, 811, 1443
Bsp119I TTCGAA 2 cut(s) 269, 1496
Bsp120I GGGCCC 1 cut(s) 1195
Bsp1286I GDGCHC 3 cut(s) 474, 1047, 1199
Bsp143I GATC 9 cut(s) 82, 108, 402, 444, 1261, 1433, 1588, 1711, 1716
BspANI GGCC 9 cut(s) 233, 290, 422, 530, 806, 875, 1088, 1197, 1239
BspCNI CTCAG 2 cut(s) 622, 964
BspFNI CGCG 3 cut(s) 314, 450, 486
BspHI TCATGA 1 cut(s) 399
BspLI GGNNCC 8 cut(s) 90, 291, 348, 736, 885, 1044, 1197, 1920
BspMI ACCTGC 2 cut(s) 709, 1351
BspPI GGATC 5 cut(s) 397, 439, 1269, 1441, 1719
BspT104I TTCGAA 2 cut(s) 269, 1496
BspT107I GGYRCC 2 cut(s) 734, 883
BspTI CTTAAG 1 cut(s) 692
BsrBI CCGCTC 2 cut(s) 207, 331
BsrFI RCCGGY 2 cut(s) 871, 1009
BssAI RCCGGY 2 cut(s) 871, 1009
BssECI CCNNGG 7 cut(s) 228, 810, 876, 1673, 1736, 1879, 1921
BssHII GCGCGC 1 cut(s) 484
BssMI GATC 9 cut(s) 82, 108, 402, 444, 1261, 1433, 1588, 1711, 1716
BssNAI GTATAC 1 cut(s) 852
BssNI GRCGYC 2 cut(s) 150, 453
BssT1I CCWWGG 3 cut(s) 876, 1673, 1879
Bst1107I GTATAC 1 cut(s) 852
Bst2UI CCWGG 9 cut(s) 383, 481, 532, 545, 826, 1517, 1737, 1790, 1923
Bst4CI ACNGT 3 cut(s) 578, 730, 1273
Bst6I CTCTTC 5 cut(s) 35, 1031, 1052, 1137, 1392
BstACI GRCGYC 2 cut(s) 150, 453
BstAFI CTTAAG 1 cut(s) 692
BstBI TTCGAA 2 cut(s) 269, 1496
BstC8I GCNNGC 7 cut(s) 424, 486, 873, 906, 991, 1011, 1199
BstDEI CTNAG 2 cut(s) 609, 972
BstENI CCTNNNNNAGG 2 cut(s) 416, 1057
BstF5I GGATG 7 cut(s) 97, 540, 1155, 1210, 1333, 1669, 1776
BstFNI CGCG 3 cut(s) 314, 450, 486
BstHHI GCGC 4 cut(s) 486, 488, 540, 562
BstKTI GATC 9 cut(s) 85, 111, 405, 447, 1264, 1436, 1591, 1714, 1719
BstMAI GTCTC 1 cut(s) 1446
BstMBI GATC 9 cut(s) 82, 108, 402, 444, 1261, 1433, 1588, 1711, 1716
BstMCI CGRYCG 1 cut(s) 111
BstMWI GCNNNNNNNGC 9 cut(s) 311, 428, 437, 461, 559, 892, 901, 1183, 1198
BstNI CCWGG 9 cut(s) 383, 481, 532, 545, 826, 1517, 1737, 1790, 1923
BstSFI CTRYAG 1 cut(s) 729
BstSLI GKGCMC 1 cut(s) 1199
BstUI CGCG 3 cut(s) 314, 450, 486
BstV1I GCAGC 6 cut(s) 395, 769, 895, 913, 1000, 1369
BstV2I GAAGAC 2 cut(s) 30, 1505
BstX2I RGATCY 2 cut(s) 444, 1711
BstXI CCANNNNNNTGG 1 cut(s) 1247
BstYI RGATCY 2 cut(s) 444, 1711
BstZ17I GTATAC 1 cut(s) 852
BsuI GTATCC 1 cut(s) 1786
BsuRI GGCC 9 cut(s) 233, 290, 422, 530, 806, 875, 1088, 1197, 1239
BtgZI GCGATG 1 cut(s) 329
BtrI CACGTC 1 cut(s) 469
BtsCI GGATG 7 cut(s) 97, 540, 1155, 1210, 1333, 1669, 1776
BtsI GCAGTG 1 cut(s) 1762
BtsIMutI CAGTG 4 cut(s) 641, 1443, 1726, 1762
BveI ACCTGC 2 cut(s) 709, 1351
Cac8I GCNNGC 7 cut(s) 424, 486, 873, 906, 991, 1011, 1199
CaiI CAGNNNCTG 1 cut(s) 904
CciI TCATGA 1 cut(s) 399
CfoI GCGC 4 cut(s) 486, 488, 540, 562
Cfr10I RCCGGY 2 cut(s) 871, 1009
CseI GACGC 3 cut(s) 158, 461, 1622
CviAII CATG 6 cut(s) 80, 400, 415, 1187, 1586, 1955
DdeI CTNAG 2 cut(s) 609, 972
DpnI GATC 9 cut(s) 84, 110, 404, 446, 1263, 1435, 1590, 1713, 1718
DpnII GATC 9 cut(s) 82, 108, 402, 444, 1261, 1433, 1588, 1711, 1716
DrdI GACNNNNNNGTC 1 cut(s) 155
DseDI GACNNNNNNGTC 1 cut(s) 155
EaeI YGGCCR 1 cut(s) 873
Eam1104I CTCTTC 5 cut(s) 35, 1031, 1052, 1137, 1392
EarI CTCTTC 5 cut(s) 35, 1031, 1052, 1137, 1392
Eco130I CCWWGG 3 cut(s) 876, 1673, 1879
Eco24I GRGCYC 2 cut(s) 1047, 1199
Eco47I GGWCC 3 cut(s) 88, 499, 1918
Eco57I CTGAAG 3 cut(s) 881, 1055, 1401
Eco88I CYCGRG 4 cut(s) 292, 755, 811, 1443
EcoNI CCTNNNNNAGG 2 cut(s) 416, 1057
EcoRII CCWGG 9 cut(s) 381, 479, 530, 543, 824, 1515, 1735, 1788, 1921
EcoT14I CCWWGG 3 cut(s) 876, 1673, 1879
EcoT22I ATGCAT 1 cut(s) 1227
EcoT38I GRGCYC 2 cut(s) 1047, 1199
ErhI CCWWGG 3 cut(s) 876, 1673, 1879
FaeI CATG 6 cut(s) 83, 403, 418, 1190, 1589, 1958
FaqI GGGAC 3 cut(s) 373, 1655, 1897
FatI CATG 6 cut(s) 79, 399, 414, 1186, 1585, 1954
FauI CCCGC 6 cut(s) 147, 431, 445, 469, 994, 1206
FbaI TGATCA 1 cut(s) 1716
FblI GTMKAC 1 cut(s) 851
FokI GGATG 7 cut(s) 84, 527, 1162, 1217, 1340, 1676, 1763
FriOI GRGCYC 2 cut(s) 1047, 1199
FspBI CTAG 1 cut(s) 282
GlaI GCGC 4 cut(s) 485, 487, 539, 561
GsuI CTGGAG 2 cut(s) 404, 1499
HaeIII GGCC 9 cut(s) 233, 290, 422, 530, 806, 875, 1088, 1197, 1239
HapII CCGG 5 cut(s) 230, 344, 872, 1010, 1193
HgaI GACGC 3 cut(s) 158, 461, 1622
HhaI GCGC 4 cut(s) 486, 488, 540, 562
Hin1I GRCGYC 2 cut(s) 150, 453
Hin1II CATG 6 cut(s) 83, 403, 418, 1190, 1589, 1958
Hin6I GCGC 4 cut(s) 484, 486, 538, 560
HinP1I GCGC 4 cut(s) 484, 486, 538, 560
HindIII AAGCTT 2 cut(s) 893, 1725
HinfI GANTC 7 cut(s) 4, 386, 771, 857, 1529, 1702, 1901
HpaII CCGG 5 cut(s) 230, 344, 872, 1010, 1193
HphI GGTGA 5 cut(s) 32, 1016, 1294, 1375, 1496
Hpy166II GTNNAC 3 cut(s) 177, 852, 1859
Hpy188I TCNGA 6 cut(s) 121, 247, 1080, 1534, 1707, 1716
Hpy8I GTNNAC 3 cut(s) 177, 852, 1859
HpyAV CCTTC 7 cut(s) 385, 490, 1111, 1318, 1325, 1360, 1702
HpyCH4III ACNGT 3 cut(s) 578, 730, 1273
HpyCH4IV ACGT 4 cut(s) 264, 468, 522, 1127
HpyCH4V TGCA 9 cut(s) 911, 933, 1177, 1225, 1342, 1357, 1409, 1755, 1946
HpyF10VI GCNNNNNNNGC 9 cut(s) 311, 428, 437, 461, 559, 892, 901, 1183, 1198
HpyF3I CTNAG 2 cut(s) 609, 972
HpySE526I ACGT 4 cut(s) 264, 468, 522, 1127
Hsp92I GRCGYC 2 cut(s) 150, 453
Hsp92II CATG 6 cut(s) 83, 403, 418, 1190, 1589, 1958
HspAI GCGC 4 cut(s) 484, 486, 538, 560
KroI GCCGGC 2 cut(s) 871, 1009
KroNI GCCGGC 2 cut(s) 873, 1011
Ksp22I TGATCA 1 cut(s) 1716
Kzo9I GATC 9 cut(s) 82, 108, 402, 444, 1261, 1433, 1588, 1711, 1716
LmnI GCTCC 5 cut(s) 212, 346, 1042, 1518, 1678
Lsp1109I GCAGC 6 cut(s) 395, 769, 895, 913, 1000, 1369
LweI GCATC 4 cut(s) 106, 549, 1234, 1785
MaeI CTAG 1 cut(s) 282
MaeII ACGT 4 cut(s) 264, 468, 522, 1127
MaeIII GTNAC 5 cut(s) 523, 578, 761, 1757, 1834
MalI GATC 9 cut(s) 84, 110, 404, 446, 1263, 1435, 1590, 1713, 1718
MbiI CCGCTC 2 cut(s) 207, 331
MboI GATC 9 cut(s) 82, 108, 402, 444, 1261, 1433, 1588, 1711, 1716
MflI RGATCY 2 cut(s) 444, 1711
MhlI GDGCHC 3 cut(s) 474, 1047, 1199
MluCI AATT 6 cut(s) 584, 614, 1105, 1404, 1412, 1448
MlyI GAGTC 4 cut(s) 395, 780, 866, 1711
MmeI TCCRAC 1 cut(s) 1896
Mph1103I ATGCAT 1 cut(s) 1227
MroNI GCCGGC 2 cut(s) 871, 1009
MseI TTAA 5 cut(s) 630, 693, 714, 978, 1161
MslI CAYNNNNRTG 3 cut(s) 78, 1245, 1482
MspA1I CMGCKG 3 cut(s) 408, 904, 1201
MspCI CTTAAG 1 cut(s) 692
MspI CCGG 5 cut(s) 230, 344, 872, 1010, 1193
Mva1269I GAATGC 4 cut(s) 750, 1177, 1216, 1946
MvaI CCWGG 9 cut(s) 383, 481, 532, 545, 826, 1517, 1737, 1790, 1923
MvnI CGCG 3 cut(s) 314, 450, 486
MwoI GCNNNNNNNGC 9 cut(s) 311, 428, 437, 461, 559, 892, 901, 1183, 1198
NaeI GCCGGC 2 cut(s) 873, 1011
NciI CCSGG 3 cut(s) 230, 344, 1194
NdeII GATC 9 cut(s) 82, 108, 402, 444, 1261, 1433, 1588, 1711, 1716
NgoMIV GCCGGC 2 cut(s) 871, 1009
NlaIII CATG 6 cut(s) 83, 403, 418, 1190, 1589, 1958
NlaIV GGNNCC 8 cut(s) 90, 291, 348, 736, 885, 1044, 1197, 1920
NmeAIII GCCGAG 3 cut(s) 266, 466, 536
NmuCI GTSAC 3 cut(s) 523, 1757, 1834
NsiI ATGCAT 1 cut(s) 1227
NspV TTCGAA 2 cut(s) 269, 1496
OliI CACNNNNGTG 1 cut(s) 1245
PaeR7I CTCGAG 1 cut(s) 1443
PagI TCATGA 1 cut(s) 399
PalAI GGCGCGCC 1 cut(s) 484
PaqCI CACCTGC 1 cut(s) 1351
PauI GCGCGC 1 cut(s) 484
PcsI WCGNNNNNNNCGW 6 cut(s) 117, 153, 156, 162, 258, 753
PctI GAATGC 4 cut(s) 750, 1177, 1216, 1946
PdiI GCCGGC 2 cut(s) 873, 1011
PfeI GAWTC 3 cut(s) 4, 1529, 1901
PflFI GACNNNGTC 1 cut(s) 152
PflMI CCANNNNNTGG 1 cut(s) 85
PfoI TCCNGGA 2 cut(s) 543, 1515
Ple19I CGATCG 1 cut(s) 111
PleI GAGTC 4 cut(s) 394, 779, 865, 1710
PpsI GAGTC 4 cut(s) 394, 779, 865, 1710
PshBI ATTAAT 1 cut(s) 630
PsiI TTATAA 1 cut(s) 1110
Psp6I CCWGG 9 cut(s) 381, 479, 530, 543, 824, 1515, 1735, 1788, 1921
PspGI CCWGG 9 cut(s) 381, 479, 530, 543, 824, 1515, 1735, 1788, 1921
PspN4I GGNNCC 8 cut(s) 90, 291, 348, 736, 885, 1044, 1197, 1920
PspOMI GGGCCC 1 cut(s) 1195
PstNI CAGNNNCTG 1 cut(s) 904
PsuI RGATCY 2 cut(s) 444, 1711
PsyI GACNNNGTC 1 cut(s) 152
PteI GCGCGC 1 cut(s) 484
PvuI CGATCG 1 cut(s) 111
PvuII CAGCTG 1 cut(s) 904
RseI CAYNNNNRTG 3 cut(s) 78, 1245, 1482
SaqAI TTAA 5 cut(s) 630, 693, 714, 978, 1161
Sau3AI GATC 9 cut(s) 82, 108, 402, 444, 1261, 1433, 1588, 1711, 1716
SchI GAGTC 4 cut(s) 395, 780, 866, 1711
SduI GDGCHC 3 cut(s) 474, 1047, 1199
SfaNI GCATC 4 cut(s) 106, 549, 1234, 1785
SfcI CTRYAG 1 cut(s) 729
Sfr274I CTCGAG 1 cut(s) 1443
SfuI TTCGAA 2 cut(s) 269, 1496
SgsI GGCGCGCC 1 cut(s) 484
SinI GGWCC 3 cut(s) 88, 499, 1918
SlaI CTCGAG 1 cut(s) 1443
SmiMI CAYNNNNRTG 3 cut(s) 78, 1245, 1482
SmlI CTYRAG 3 cut(s) 473, 692, 1443
SmoI CTYRAG 3 cut(s) 473, 692, 1443
Sse9I AATT 6 cut(s) 584, 614, 1105, 1404, 1412, 1448
SspMI CTAG 1 cut(s) 282
StyI CCWWGG 3 cut(s) 876, 1673, 1879
TaaI ACNGT 3 cut(s) 578, 730, 1273
TaiI ACGT 4 cut(s) 267, 471, 525, 1130
TaqI TCGA 8 cut(s) 165, 195, 269, 567, 1055, 1444, 1496, 1764
TasI AATT 6 cut(s) 584, 614, 1105, 1404, 1412, 1448
TauI GCSGC 7 cut(s) 308, 311, 314, 331, 352, 841, 889
TfiI GAWTC 3 cut(s) 4, 1529, 1901
Tru1I TTAA 5 cut(s) 630, 693, 714, 978, 1161
Tru9I TTAA 5 cut(s) 630, 693, 714, 978, 1161
TscAI CASTG 4 cut(s) 641, 1443, 1726, 1762
TseFI GTSAC 3 cut(s) 523, 1757, 1834
TseI GCWGC 6 cut(s) 408, 782, 901, 908, 1013, 1357
Tsp45I GTSAC 3 cut(s) 523, 1757, 1834
TspDTI ATGAA 6 cut(s) 17, 332, 650, 1344, 1650, 1782
TspRI CASTG 4 cut(s) 641, 1443, 1726, 1762
Tth111I GACNNNGTC 1 cut(s) 152
Van91I CCANNNNNTGG 1 cut(s) 85
Vha464I CTTAAG 1 cut(s) 692
VpaK11BI GGWCC 3 cut(s) 88, 499, 1918
VspI ATTAAT 1 cut(s) 630
XagI CCTNNNNNAGG 2 cut(s) 416, 1057
XapI RAATTY 2 cut(s) 584, 1412
XhoI CTCGAG 1 cut(s) 1443
XmiI GTMKAC 1 cut(s) 851
XspI CTAG 1 cut(s) 282
Zsp2I ATGCAT 1 cut(s) 1227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.