Rh1DG224800

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0014366
Physical Location & Seq
Forward (+)
43539438 .. 43543270
3833 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG224800.1

Sequence Viewer

Length: 1977 bp
ATGAATCCCCACAAAACAGAGGAAGACCTCTTCAACCATCACCACCACCACCACCACCATTTCCACCACCACCTCCACAACCATGATCTGGACCCACCGCATCCTCCTCCTCCGATCGTCCAATCCGAGCCGTCCATTCCCCTCCCGCAAAACGACGTCGTCGTCGTCGAGCCGTTGTTCACTCCTCTCCCCGAAATCGACCTCTTCCGCTCCTCCTCCACCTCCTCCTCCCCGGCCCACTCCTCCTCCGAAAACGAAAACGACGACGTTTCGAACCCTAACCCTAGCTTGGCCCCGAGCAACAACGCCGCCGCCGCCGCGATGAAATCCACGCCGCTCTACATCAGCCCGGAGCCGCACATCTCGTCGCAGTTCTACACCTTCAACCTGGAGTCCCACTCCCTCATGATCCGCTGCCTCATGGAGGCCCGCCTCGCCACCCCCGCCGAGATCCGCGACGCCACCCCCGCCGACGTGCTCAAGTCGTGGCGCGCCGTCTGGAAGGACCGGAACGAGGACACCGCTTACGTCACGGCCTGGAAGCGCATCCAGGACAAGCTCTCGGCGCACCTCGACCAAAACGGTAACGAATTTCTGTGCTTCAAGAACAATACTCAGCAATTCGTTTCGCACATTAATCAGTGGCAGGATATTGTTATGGCTTTTCATAGTGATACCGATTTGAAACACTTGGGGCTTAAGGAAACCATTGATAGGATTAAGCAGGTCTGGACTGTAGGTGCTAAGTTTTACGGCATTCCTGAGAGTTATATTAGAGTCTGTGTTGCTGCGTGTCCTGTGTGTTCTTCGGCCTCCTCGGGGCTTACGGCTAGGAATAAGAGGCGGCGGTTTGAGTATACCGAGTCGTTTGATGTGCCGGCGAAGGAGGTGCCGCATAAGCTTCAGCAGCTGGCTGCAAAGCATAAGGTGGTGCTTTGCATTAGGCAGAAGTATATTAGGTATAAGCCGTTTATGGCTGAGGTTAAGGACTATGCTTGCCACAGGGCGGGTGAGCCAGCTGCGAAGAAGTCCAAGATACTGAAGAGGGAGCCCTATGCCTCAAAGAGGTGTGGGTGTGGGTTTCGGATTAGGGCCATTGTTCCTATTACGAATTATAATGAGAAGGACAAGACGTTTGTGTATCAGGAAGAGGGGATGGCTGTGTTTAAGTTGTATGCTGTGCATTCTGGGCATGAGCCGGGCCCGCTGGATGGGAATGCGAGGATTATGCATCGGGTTGTGGGCCACAAAGGTGGGTTTTTGATGGATCAAGATACTGTGTATGGGGTGAGTGATGAGTTTGATAACGAGGGGTTTGGATTGTTGGGGAAGGATGAAGGGGATTTGCACCATTCAGTTTTGCAGCAGGTGAAGGAGTTGAGAGCTGAAGTTGGGTGTTTAGAAGAGAAAATTGCAAAAATCCCACAAGAGCTTTTGGGATCAGTGTCTCGAGAATTGTTTGATATTGTGAATAAAGTTAGACATATAGGTGAGGGAAGTTCGAAGACGATGGGTTTGCTCCAGGACAAGCCAGAATCAGATGATATTTTGGTCGGGGAGAATGATTTGGCACATTGGACTGATAACCACCATGATCGTCTATATGGAGATGGACAGGACGCTGATTTGATTGAGGATGATGAAGATAGTTTTGGGCGAACTCTTGGGGATGTTGTCCCTTGGGAACAGATGAGGACAGAGTGTAGGAGTCAGAAGGATCTGATCAGTGAAGCTTGTAAGCCTGGGAAGTGGTTGAAATGCAGTGACTTCGATGAAAAGAGCATCCTTGATTGCCAGGATACTAAACTAACCAAGCCCTTATCACAAGACGAGAGTATAGTGACAGATGTAGGTCTTATTGGTTTACAGGTTGATAGTTTCTACCAAGGGACTTCTAAATGGTATGATTCTCCTTGTGGGTTGGACCCAGGTGCGGATTGTGGGGATAGTGCATTCAGGCATGGGGGGATTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

658

Amino Acids

74.08

Weight (kDa)

5.82

Isoelectric Point (pI)

49.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014366)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G60850
fragaria_vesca FvH4_7g11970
malus_domestica MD02G1203100.v1.1 MD07G1123000.v1.1
prunus_persica Prupe.2G146400_v2.0.a1
pyrus_communis pycom02g16600 pycom07g11140
rosa_chinensis RchiOBHm_Chr1g0350691
rosa_laevigata RLG00000028463
rosa_multiflora Rmu_sc0002150.1_g000003
rosa_roxburghii Rroxscaffold_4G00304600
rosa_rugosa Rorug01G0213100
rosa_samantha Rh1AG227400 Rh1BG196900 Rh1CG212300 Rh1DG224800
rosa_wichuraiana Rw1G019690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1116
AarI CACCTGC 1 cut(s) 1357
AasI GACNNNNNNGTC 1 cut(s) 161
AatII GACGTC 1 cut(s) 159
Acc36I ACCTGC 2 cut(s) 715, 1357
AccB1I GGYRCC 1 cut(s) 889
AccB7I CCANNNNNTGG 1 cut(s) 88
AccBSI CCGCTC 2 cut(s) 210, 337
AccI GTMKAC 1 cut(s) 857
AccII CGCG 3 cut(s) 320, 456, 492
AclWI GGATC 5 cut(s) 403, 445, 1275, 1447, 1725
AcsI RAATTY 1 cut(s) 590
AcuI CTGAAG 3 cut(s) 887, 1061, 1407
AcyI GRCGYC 2 cut(s) 156, 459
AflII CTTAAG 1 cut(s) 698
AgsI TTSAA 5 cut(s) 34, 385, 604, 685, 1756
AjiI CACGTC 1 cut(s) 475
AjnI CCWGG 7 cut(s) 387, 536, 549, 1521, 1741, 1794, 1927
AjuI GAANNNNNNNTTGG 2 cut(s) 1635, 1667
AleI CACNNNNGTG 1 cut(s) 1251
AluBI AGCT 8 cut(s) 288, 559, 901, 910, 1019, 1385, 1432, 1733
AluI AGCT 8 cut(s) 288, 559, 901, 910, 1019, 1385, 1432, 1733
Alw21I GWGCWC 1 cut(s) 480
Alw26I GTCTC 1 cut(s) 1452
AlwI GGATC 5 cut(s) 403, 445, 1275, 1447, 1725
AlwNI CAGNNNCTG 1 cut(s) 910
Ama87I CYCGRG 3 cut(s) 295, 817, 1449
AoxI GGCC 8 cut(s) 234, 291, 426, 534, 810, 1092, 1201, 1243
ApaI GGGCCC 1 cut(s) 1205
ApeKI GCWGC 6 cut(s) 414, 788, 907, 914, 1019, 1363
ApoI RAATTY 1 cut(s) 590
ArsI GACNNNNNNTTYG 4 cut(s) 1118, 1150, 1498, 1530
AscI GGCGCGCC 1 cut(s) 490
AseI ATTAAT 1 cut(s) 636
AspLEI GCGC 4 cut(s) 492, 494, 546, 568
AsuC2I CCSGG 3 cut(s) 233, 350, 1200
AsuHPI GGTGA 5 cut(s) 32, 1022, 1300, 1381, 1502
AsuII TTCGAA 2 cut(s) 272, 1502
AvaI CYCGRG 3 cut(s) 295, 817, 1449
AvaII GGWCC 3 cut(s) 91, 505, 1924
BaeGI GKGCMC 1 cut(s) 1205
BanI GGYRCC 1 cut(s) 889
BanII GRGCYC 2 cut(s) 1053, 1205
BbsI GAAGAC 2 cut(s) 30, 1511
Bbv12I GWGCWC 1 cut(s) 480
BbvCI CCTCAGC 1 cut(s) 978
BbvI GCAGC 6 cut(s) 401, 775, 901, 919, 1006, 1375
BccI CCATC 6 cut(s) 45, 1150, 1205, 1258, 1504, 1604
BceAI ACGGC 7 cut(s) 115, 157, 479, 549, 769, 843, 952
BcgI CGANNNNNNTGC 8 cut(s) 871, 905, 1210, 1244, 1498, 1532, 1750, 1784
BciT130I CCWGG 7 cut(s) 389, 538, 551, 1523, 1743, 1796, 1929
BciVI GTATCC 1 cut(s) 1792
BclI TGATCA 1 cut(s) 1722
BcnI CCSGG 3 cut(s) 233, 350, 1200
BcoDI GTCTC 1 cut(s) 1452
BfaI CTAG 2 cut(s) 285, 831
BfmI CTRYAG 1 cut(s) 735
BfrI CTTAAG 1 cut(s) 698
BfuAI ACCTGC 2 cut(s) 715, 1357
BfuI GTATCC 1 cut(s) 1792
Bme18I GGWCC 3 cut(s) 91, 505, 1924
BmeT110I CYCGRG 3 cut(s) 295, 817, 1449
BmgBI CACGTC 1 cut(s) 475
BmiI GGNNCC 7 cut(s) 93, 294, 354, 891, 1050, 1203, 1926
BmsI GCATC 4 cut(s) 109, 555, 1240, 1791
BpiI GAAGAC 2 cut(s) 30, 1511
BplI GAGNNNNNCTC 2 cut(s) 383, 415
BpmI CTGGAG 2 cut(s) 410, 1505
Bpu10I CCTNAGC 1 cut(s) 978
Bpu14I TTCGAA 2 cut(s) 272, 1502
BpuEI CTTGAG 1 cut(s) 464
BpuMI CCSGG 3 cut(s) 233, 350, 1200
BsaHI GRCGYC 2 cut(s) 156, 459
BsaJI CCNNGG 6 cut(s) 231, 816, 1679, 1742, 1885, 1927
BsaWI WCCGGW 1 cut(s) 507
BsaXI ACNNNNNCTCC 2 cut(s) 230, 260
Bse118I RCCGGY 1 cut(s) 877
BseBI CCWGG 7 cut(s) 389, 538, 551, 1523, 1743, 1796, 1929
BseDI CCNNGG 6 cut(s) 231, 816, 1679, 1742, 1885, 1927
BseGI GGATG 8 cut(s) 100, 546, 1161, 1216, 1339, 1642, 1675, 1782
BseMII CTCAG 3 cut(s) 629, 753, 969
BsePI GCGCGC 1 cut(s) 490
BseSI GKGCMC 1 cut(s) 1205
BseXI GCAGC 6 cut(s) 401, 775, 901, 919, 1006, 1375
Bsh1236I CGCG 3 cut(s) 320, 456, 492
Bsh1285I CGRYCG 1 cut(s) 117
BshFI GGCC 8 cut(s) 236, 293, 428, 536, 812, 1094, 1203, 1245
BshNI GGYRCC 1 cut(s) 889
BsiEI CGRYCG 1 cut(s) 117
BsiHKAI GWGCWC 1 cut(s) 480
BsiHKCI CYCGRG 3 cut(s) 295, 817, 1449
BsiSI CCGG 5 cut(s) 233, 350, 508, 878, 1199
BslFI GGGAC 3 cut(s) 379, 1661, 1903
BsmAI GTCTC 1 cut(s) 1452
BsmFI GGGAC 3 cut(s) 379, 1661, 1903
BsmI GAATGC 4 cut(s) 756, 1183, 1222, 1952
BsnI GGCC 8 cut(s) 236, 293, 428, 536, 812, 1094, 1203, 1245
BsoBI CYCGRG 3 cut(s) 295, 817, 1449
Bsp119I TTCGAA 2 cut(s) 272, 1502
Bsp120I GGGCCC 1 cut(s) 1201
Bsp1286I GDGCHC 3 cut(s) 480, 1053, 1205
Bsp143I GATC 9 cut(s) 85, 114, 408, 450, 1267, 1439, 1594, 1717, 1722
BspANI GGCC 8 cut(s) 236, 293, 428, 536, 812, 1094, 1203, 1245
BspCNI CTCAG 3 cut(s) 628, 754, 970
BspFNI CGCG 3 cut(s) 320, 456, 492
BspHI TCATGA 1 cut(s) 405
BspLI GGNNCC 7 cut(s) 93, 294, 354, 891, 1050, 1203, 1926
BspMI ACCTGC 2 cut(s) 715, 1357
BspPI GGATC 5 cut(s) 403, 445, 1275, 1447, 1725
BspT104I TTCGAA 2 cut(s) 272, 1502
BspT107I GGYRCC 1 cut(s) 889
BspTI CTTAAG 1 cut(s) 698
BsrBI CCGCTC 2 cut(s) 210, 337
BsrFI RCCGGY 1 cut(s) 877
BssAI RCCGGY 1 cut(s) 877
BssECI CCNNGG 6 cut(s) 231, 816, 1679, 1742, 1885, 1927
BssHII GCGCGC 1 cut(s) 490
BssMI GATC 9 cut(s) 85, 114, 408, 450, 1267, 1439, 1594, 1717, 1722
BssNAI GTATAC 1 cut(s) 858
BssNI GRCGYC 2 cut(s) 156, 459
BssT1I CCWWGG 2 cut(s) 1679, 1885
Bst1107I GTATAC 1 cut(s) 858
Bst2UI CCWGG 7 cut(s) 389, 538, 551, 1523, 1743, 1796, 1929
Bst4CI ACNGT 3 cut(s) 584, 736, 1279
Bst6I CTCTTC 5 cut(s) 35, 209, 1037, 1143, 1398
BstACI GRCGYC 2 cut(s) 156, 459
BstAFI CTTAAG 1 cut(s) 698
BstBI TTCGAA 2 cut(s) 272, 1502
BstC8I GCNNGC 7 cut(s) 430, 492, 879, 912, 997, 1017, 1205
BstDEI CTNAG 4 cut(s) 615, 744, 762, 978
BstENI CCTNNNNNAGG 2 cut(s) 422, 1063
BstF5I GGATG 8 cut(s) 100, 546, 1161, 1216, 1339, 1642, 1675, 1782
BstFNI CGCG 3 cut(s) 320, 456, 492
BstHHI GCGC 4 cut(s) 492, 494, 546, 568
BstKTI GATC 9 cut(s) 88, 117, 411, 453, 1270, 1442, 1597, 1720, 1725
BstMAI GTCTC 1 cut(s) 1452
BstMBI GATC 9 cut(s) 85, 114, 408, 450, 1267, 1439, 1594, 1717, 1722
BstMCI CGRYCG 1 cut(s) 117
BstNI CCWGG 7 cut(s) 389, 538, 551, 1523, 1743, 1796, 1929
BstSFI CTRYAG 1 cut(s) 735
BstSLI GKGCMC 1 cut(s) 1205
BstUI CGCG 3 cut(s) 320, 456, 492
BstV1I GCAGC 6 cut(s) 401, 775, 901, 919, 1006, 1375
BstV2I GAAGAC 2 cut(s) 30, 1511
BstX2I RGATCY 2 cut(s) 450, 1717
BstXI CCANNNNNNTGG 1 cut(s) 1253
BstYI RGATCY 2 cut(s) 450, 1717
BstZ17I GTATAC 1 cut(s) 858
BsuI GTATCC 1 cut(s) 1792
BsuRI GGCC 8 cut(s) 236, 293, 428, 536, 812, 1094, 1203, 1245
BtgZI GCGATG 1 cut(s) 335
BtrI CACGTC 1 cut(s) 475
BtsCI GGATG 8 cut(s) 100, 546, 1161, 1216, 1339, 1642, 1675, 1782
BtsI GCAGTG 1 cut(s) 1768
BtsIMutI CAGTG 4 cut(s) 647, 1449, 1732, 1768
BveI ACCTGC 2 cut(s) 715, 1357
Cac8I GCNNGC 7 cut(s) 430, 492, 879, 912, 997, 1017, 1205
CaiI CAGNNNCTG 1 cut(s) 910
CciI TCATGA 1 cut(s) 405
CfoI GCGC 4 cut(s) 492, 494, 546, 568
Cfr10I RCCGGY 1 cut(s) 877
CseI GACGC 2 cut(s) 467, 1628
CviAII CATG 6 cut(s) 83, 406, 421, 1193, 1592, 1961
DdeI CTNAG 4 cut(s) 615, 744, 762, 978
DpnI GATC 9 cut(s) 87, 116, 410, 452, 1269, 1441, 1596, 1719, 1724
DpnII GATC 9 cut(s) 85, 114, 408, 450, 1267, 1439, 1594, 1717, 1722
DrdI GACNNNNNNGTC 1 cut(s) 161
DseDI GACNNNNNNGTC 1 cut(s) 161
Eam1104I CTCTTC 5 cut(s) 35, 209, 1037, 1143, 1398
EarI CTCTTC 5 cut(s) 35, 209, 1037, 1143, 1398
Eco130I CCWWGG 2 cut(s) 1679, 1885
Eco24I GRGCYC 2 cut(s) 1053, 1205
Eco47I GGWCC 3 cut(s) 91, 505, 1924
Eco57I CTGAAG 3 cut(s) 887, 1061, 1407
Eco88I CYCGRG 3 cut(s) 295, 817, 1449
EcoNI CCTNNNNNAGG 2 cut(s) 422, 1063
EcoRII CCWGG 7 cut(s) 387, 536, 549, 1521, 1741, 1794, 1927
EcoT14I CCWWGG 2 cut(s) 1679, 1885
EcoT22I ATGCAT 1 cut(s) 1233
EcoT38I GRGCYC 2 cut(s) 1053, 1205
ErhI CCWWGG 2 cut(s) 1679, 1885
FaeI CATG 6 cut(s) 86, 409, 424, 1196, 1595, 1964
FaqI GGGAC 3 cut(s) 379, 1661, 1903
FatI CATG 6 cut(s) 82, 405, 420, 1192, 1591, 1960
FauI CCCGC 6 cut(s) 153, 437, 451, 475, 1000, 1212
FbaI TGATCA 1 cut(s) 1722
FblI GTMKAC 1 cut(s) 857
FokI GGATG 8 cut(s) 87, 533, 1168, 1223, 1346, 1649, 1682, 1769
FriOI GRGCYC 2 cut(s) 1053, 1205
FspBI CTAG 2 cut(s) 285, 831
GlaI GCGC 4 cut(s) 491, 493, 545, 567
GsuI CTGGAG 2 cut(s) 410, 1505
HaeIII GGCC 8 cut(s) 236, 293, 428, 536, 812, 1094, 1203, 1245
HapII CCGG 5 cut(s) 233, 350, 508, 878, 1199
HgaI GACGC 2 cut(s) 467, 1628
HhaI GCGC 4 cut(s) 492, 494, 546, 568
Hin1I GRCGYC 2 cut(s) 156, 459
Hin1II CATG 6 cut(s) 86, 409, 424, 1196, 1595, 1964
Hin6I GCGC 4 cut(s) 490, 492, 544, 566
HinP1I GCGC 4 cut(s) 490, 492, 544, 566
HindIII AAGCTT 2 cut(s) 899, 1731
HinfI GANTC 7 cut(s) 4, 392, 777, 863, 1535, 1708, 1907
HpaII CCGG 5 cut(s) 233, 350, 508, 878, 1199
HphI GGTGA 5 cut(s) 32, 1022, 1300, 1381, 1502
Hpy166II GTNNAC 3 cut(s) 180, 858, 1865
Hpy188I TCNGA 7 cut(s) 114, 127, 250, 1086, 1540, 1713, 1722
Hpy8I GTNNAC 3 cut(s) 180, 858, 1865
HpyAV CCTTC 8 cut(s) 391, 496, 877, 1117, 1324, 1331, 1366, 1708
HpyCH4III ACNGT 3 cut(s) 584, 736, 1279
HpyCH4IV ACGT 5 cut(s) 156, 267, 474, 528, 1133
HpyCH4V TGCA 9 cut(s) 917, 939, 1183, 1231, 1348, 1363, 1415, 1761, 1952
HpyF3I CTNAG 4 cut(s) 615, 744, 762, 978
HpySE526I ACGT 5 cut(s) 156, 267, 474, 528, 1133
Hsp92I GRCGYC 2 cut(s) 156, 459
Hsp92II CATG 6 cut(s) 86, 409, 424, 1196, 1595, 1964
HspAI GCGC 4 cut(s) 490, 492, 544, 566
KroI GCCGGC 1 cut(s) 877
KroNI GCCGGC 1 cut(s) 879
Ksp22I TGATCA 1 cut(s) 1722
Kzo9I GATC 9 cut(s) 85, 114, 408, 450, 1267, 1439, 1594, 1717, 1722
LmnI GCTCC 4 cut(s) 215, 352, 1048, 1524
Lsp1109I GCAGC 6 cut(s) 401, 775, 901, 919, 1006, 1375
LweI GCATC 4 cut(s) 109, 555, 1240, 1791
MaeI CTAG 2 cut(s) 285, 831
MaeII ACGT 5 cut(s) 156, 267, 474, 528, 1133
MaeIII GTNAC 4 cut(s) 529, 584, 1763, 1840
MalI GATC 9 cut(s) 87, 116, 410, 452, 1269, 1441, 1596, 1719, 1724
MbiI CCGCTC 2 cut(s) 210, 337
MboI GATC 9 cut(s) 85, 114, 408, 450, 1267, 1439, 1594, 1717, 1722
MflI RGATCY 2 cut(s) 450, 1717
MhlI GDGCHC 3 cut(s) 480, 1053, 1205
MluCI AATT 5 cut(s) 590, 620, 1111, 1410, 1454
MlyI GAGTC 4 cut(s) 401, 786, 872, 1717
MmeI TCCRAC 1 cut(s) 1902
Mph1103I ATGCAT 1 cut(s) 1233
MroNI GCCGGC 1 cut(s) 877
MseI TTAA 5 cut(s) 636, 699, 720, 984, 1167
MslI CAYNNNNRTG 3 cut(s) 81, 1251, 1488
MspA1I CMGCKG 4 cut(s) 414, 910, 1019, 1207
MspCI CTTAAG 1 cut(s) 698
MspI CCGG 5 cut(s) 233, 350, 508, 878, 1199
Mva1269I GAATGC 4 cut(s) 756, 1183, 1222, 1952
MvaI CCWGG 7 cut(s) 389, 538, 551, 1523, 1743, 1796, 1929
MvnI CGCG 3 cut(s) 320, 456, 492
NaeI GCCGGC 1 cut(s) 879
NciI CCSGG 3 cut(s) 233, 350, 1200
NdeII GATC 9 cut(s) 85, 114, 408, 450, 1267, 1439, 1594, 1717, 1722
NgoMIV GCCGGC 1 cut(s) 877
NlaIII CATG 6 cut(s) 86, 409, 424, 1196, 1595, 1964
NlaIV GGNNCC 7 cut(s) 93, 294, 354, 891, 1050, 1203, 1926
NmeAIII GCCGAG 2 cut(s) 472, 542
NmuCI GTSAC 3 cut(s) 529, 1763, 1840
NsiI ATGCAT 1 cut(s) 1233
NspV TTCGAA 2 cut(s) 272, 1502
OliI CACNNNNGTG 1 cut(s) 1251
PaeR7I CTCGAG 1 cut(s) 1449
PagI TCATGA 1 cut(s) 405
PalAI GGCGCGCC 1 cut(s) 490
PaqCI CACCTGC 1 cut(s) 1357
PauI GCGCGC 1 cut(s) 490
PcsI WCGNNNNNNNCGW 5 cut(s) 123, 159, 162, 165, 261
PctI GAATGC 4 cut(s) 756, 1183, 1222, 1952
PdiI GCCGGC 1 cut(s) 879
PfeI GAWTC 3 cut(s) 4, 1535, 1907
PflFI GACNNNGTC 1 cut(s) 158
PflMI CCANNNNNTGG 1 cut(s) 88
PfoI TCCNGGA 2 cut(s) 549, 1521
Ple19I CGATCG 1 cut(s) 117
PleI GAGTC 4 cut(s) 400, 785, 871, 1716
PpsI GAGTC 4 cut(s) 400, 785, 871, 1716
PshBI ATTAAT 1 cut(s) 636
PsiI TTATAA 1 cut(s) 1116
Psp6I CCWGG 7 cut(s) 387, 536, 549, 1521, 1741, 1794, 1927
PspGI CCWGG 7 cut(s) 387, 536, 549, 1521, 1741, 1794, 1927
PspN4I GGNNCC 7 cut(s) 93, 294, 354, 891, 1050, 1203, 1926
PspOMI GGGCCC 1 cut(s) 1201
PstNI CAGNNNCTG 1 cut(s) 910
PsuI RGATCY 2 cut(s) 450, 1717
PsyI GACNNNGTC 1 cut(s) 158
PteI GCGCGC 1 cut(s) 490
PvuI CGATCG 1 cut(s) 117
PvuII CAGCTG 2 cut(s) 910, 1019
RseI CAYNNNNRTG 3 cut(s) 81, 1251, 1488
SaqAI TTAA 5 cut(s) 636, 699, 720, 984, 1167
Sau3AI GATC 9 cut(s) 85, 114, 408, 450, 1267, 1439, 1594, 1717, 1722
SchI GAGTC 4 cut(s) 401, 786, 872, 1717
SduI GDGCHC 3 cut(s) 480, 1053, 1205
SfaNI GCATC 4 cut(s) 109, 555, 1240, 1791
SfcI CTRYAG 1 cut(s) 735
Sfr274I CTCGAG 1 cut(s) 1449
SfuI TTCGAA 2 cut(s) 272, 1502
SgsI GGCGCGCC 1 cut(s) 490
SinI GGWCC 3 cut(s) 91, 505, 1924
SlaI CTCGAG 1 cut(s) 1449
SmiMI CAYNNNNRTG 3 cut(s) 81, 1251, 1488
SmlI CTYRAG 3 cut(s) 479, 698, 1449
SmoI CTYRAG 3 cut(s) 479, 698, 1449
Sse9I AATT 5 cut(s) 590, 620, 1111, 1410, 1454
SspMI CTAG 2 cut(s) 285, 831
StyI CCWWGG 2 cut(s) 1679, 1885
TaaI ACNGT 3 cut(s) 584, 736, 1279
TaiI ACGT 5 cut(s) 159, 270, 477, 531, 1136
TaqI TCGA 7 cut(s) 168, 198, 272, 573, 1450, 1502, 1770
TasI AATT 5 cut(s) 590, 620, 1111, 1410, 1454
TauI GCSGC 8 cut(s) 311, 314, 317, 320, 337, 358, 847, 895
TfiI GAWTC 3 cut(s) 4, 1535, 1907
Tru1I TTAA 5 cut(s) 636, 699, 720, 984, 1167
Tru9I TTAA 5 cut(s) 636, 699, 720, 984, 1167
TscAI CASTG 4 cut(s) 647, 1449, 1732, 1768
TseFI GTSAC 3 cut(s) 529, 1763, 1840
TseI GCWGC 6 cut(s) 414, 788, 907, 914, 1019, 1363
Tsp45I GTSAC 3 cut(s) 529, 1763, 1840
TspDTI ATGAA 6 cut(s) 17, 338, 656, 1350, 1656, 1788
TspRI CASTG 4 cut(s) 647, 1449, 1732, 1768
Tth111I GACNNNGTC 1 cut(s) 158
Van91I CCANNNNNTGG 1 cut(s) 88
Vha464I CTTAAG 1 cut(s) 698
VpaK11BI GGWCC 3 cut(s) 91, 505, 1924
VspI ATTAAT 1 cut(s) 636
XagI CCTNNNNNAGG 2 cut(s) 422, 1063
XapI RAATTY 1 cut(s) 590
XhoI CTCGAG 1 cut(s) 1449
XmiI GTMKAC 1 cut(s) 857
XspI CTAG 2 cut(s) 285, 831
ZraI GACGTC 1 cut(s) 157
Zsp2I ATGCAT 1 cut(s) 1233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.