Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0015431

Physical Location & Seq

Genomic Coordinates Reverse (-)

13180988 .. 13185469

Gene Structure 4482 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g15100.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1101 bp

ATGGGTAGCATTAATCAGATAGCATTGGGTTGCGGAATAGCTACTGTCAGAGTTTCAATGGCGAAACCATCGTGGGCTGTGAGAGCTGAGCTTCCCGGAGCCCCTGATCTCTTTGCCGAGAGGTCCATTCTCCGAAGTGGGTCTTCCTCTTCTCGCCGGCGTGACCTTGTTTTCGTCGTCAATCCTTCAGGGGCTAATGGGAGGACTGGTAAGGAGTGGAAGAAGCTGCTTCCGTATTTGAGGTCTCGTCTTGGTGCTGATTGCAATATATGCGAGTCTTTAACATCAGGTCCTTCTCATGCAATTGACATAACGCGGGAGGCTATACGGGAGGGTGCAGATGCTGTAATCGTGGTGGGAGGAGATGGAACTTTGCATGAGGTTGTGAATGGATTCTTTTGGGCTGGAAAACCTGTTACTAATTACGATAAAGAGGCCACCCATTCAACTGCCCTCGGTCTCATTCCCTTGGGAACTGGGTCTGATTTCGCCAGATCATTTGGCTGGAAAAATAATCCGTATGAAGCCATCGAACGCATAGCCAAAGGACAGAGATCACGAATAGATGTTGGAGTTATTTGTGGAGAAACTGATGAACCTCATTACTTTGTTAATGTTGCTGACATTCACTTGAGTGCAAAAGCAGGATACCATGCTTCTAAATACAAGAGATTCGGAAACTTGTGCTATGTTATTGGTGCTTTGAAAGGCTTTATCGGGCACCGTAATCAGGACCTTAAGATCAAGGTCAATGAAGGGGAGTGGGAAGTATATCCTCAAGTAACAGCCCTTTGCATTGGAAATGCAAAATACTTTGGTGGTGGCATGAAAATTACACCAAATGCTGATCCTCAGAATGGAAAATTTGAGGTTGTGATTCTTCAGGACTTCAAGTGGTATGACTTCCTCTTAAAGCTGCATAAGCTGTACAATGGAACTCATCTATCAGTGGAAAATGTATCTTCAAGAAGTGTGCATTCTATTGAAGTGGAGGAGATTGCAGGAAGTGGCAACATATATGTTCAATCAGACGGCGAACATTTAGGATTCCTGCCTAGAAAATTTTGTATATTACCTTCTGCAGTTGAGATGATATGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004143 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005886 GO:0006066 GO:0006629 GO:0006643 GO:0006664 GO:0006665 GO:0006671 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009247 GO:0009266 GO:0009409 GO:0009628 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017050 GO:0019751 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046467 GO:0046519 GO:0050896 GO:0071704 GO:0071944 GO:0097164 GO:1901135 GO:1901137 GO:1901564 GO:1901576 GO:1901615 GO:1903509

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DAGK_cat

Protein Analysis

367

Amino Acids

39.99

Weight (kDa)

8.33

Isoelectric Point (pI)

34.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DAGK_cat	PF00781	56 - 192	1.4e-28	Diacylglycerol kinase catalytic domain
YegS_C	PF19279	213 - 365	4.2e-25	YegS C-terminal NAD kinase beta sandwich-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015431)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46090
fragaria_vesca	FvH4_7g15100
malus_domestica	MD01G1069600.v1.1 MD07G1132800.v1.1
prunus_persica	Prupe.2G175700_v2.0.a1
pyrus_communis	pycom01g09890 pycom07g12960
rosa_chinensis	RchiOBHm_Chr1g0357291
rosa_laevigata	RLG00000028030
rosa_rugosa	Rorug01G0256100
rosa_samantha	Rh1AG269400 Rh1BG237300 Rh1CG253600 Rh1DG265200
rosa_wichuraiana	Rw1G023860 Rw1G024000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	720
AccII	CGCG	1 cut(s)	316
AciI	CCGC	2 cut(s)	33, 316
AclWI	GGATC	1 cut(s)	842
AcsI	RAATTY	2 cut(s)	863, 1061
AcuI	CTGAAG	2 cut(s)	171, 866
AfaI	GTAC	1 cut(s)	929
AfiI	CCNNNNNNNGG	2 cut(s)	730, 857
AflII	CTTAAG	1 cut(s)	737
AgsI	TTSAA	7 cut(s)	57, 447, 706, 892, 966, 986, 1025
AleI	CACNNNNGTG	1 cut(s)	633
AluBI	AGCT	6 cut(s)	41, 86, 91, 226, 916, 925
AluI	AGCT	6 cut(s)	41, 86, 91, 226, 916, 925
Alw26I	GTCTC	2 cut(s)	249, 464
AlwI	GGATC	1 cut(s)	842
AlwNI	CAGNNNCTG	1 cut(s)	344
AoxI	GGCC	1 cut(s)	435
ApeKI	GCWGC	2 cut(s)	226, 916
ApoI	RAATTY	2 cut(s)	863, 1061
ArsI	GACNNNNNNTTYG	2 cut(s)	155, 187
AseI	ATTAAT	1 cut(s)	12
Asp700I	GAANNNNTTC	1 cut(s)	392
AspS9I	GGNCC	3 cut(s)	123, 290, 733
AsuC2I	CCSGG	1 cut(s)	96
AvaII	GGWCC	3 cut(s)	123, 290, 733
BaeGI	GKGCMC	1 cut(s)	723
BanI	GGYRCC	1 cut(s)	720
BanII	GRGCYC	1 cut(s)	103
BarI	GAAGNNNNNNTAC	2 cut(s)	1060, 1092
BbsI	GAAGAC	1 cut(s)	135
BbvI	GCAGC	2 cut(s)	213, 903
BccI	CCATC	3 cut(s)	76, 359, 536
BceAI	ACGGC	1 cut(s)	1048
BciVI	GTATCC	1 cut(s)	641
BcnI	CCSGG	1 cut(s)	96
BcoDI	GTCTC	2 cut(s)	249, 464
BfaI	CTAG	1 cut(s)	1056
BfmI	CTRYAG	1 cut(s)	1080
BfrI	CTTAAG	1 cut(s)	737
BfuI	GTATCC	1 cut(s)	641
BisI	GCNGC	2 cut(s)	227, 917
BlpI	GCTNAGC	1 cut(s)	87
BlsI	GCNGC	2 cut(s)	228, 918
Bme1390I	CCNGG	1 cut(s)	96
Bme18I	GGWCC	3 cut(s)	123, 290, 733
BmgT120I	GGNCC	3 cut(s)	123, 290, 733
BmiI	GGNNCC	2 cut(s)	100, 722
BmrFI	CCNGG	1 cut(s)	96
BmrI	ACTGGG	1 cut(s)	486
BmsI	GCATC	1 cut(s)	331
BmuI	ACTGGG	1 cut(s)	486
BpiI	GAAGAC	1 cut(s)	135
Bpu1102I	GCTNAGC	1 cut(s)	87
BpuEI	CTTGAG	2 cut(s)	652, 762
BpuMI	CCSGG	1 cut(s)	96
BsaI	GGTCTC	2 cut(s)	249, 464
BsaJI	CCNNGG	2 cut(s)	454, 468
BsaXI	ACNNNNNCTCC	2 cut(s)	193, 223
Bsc4I	CCNNNNNNNGG	2 cut(s)	730, 857
Bse118I	RCCGGY	1 cut(s)	156
Bse1I	ACTGG	2 cut(s)	211, 481
BseDI	CCNNGG	2 cut(s)	454, 468
BseLI	CCNNNNNNNGG	2 cut(s)	730, 857
BseMII	CTCAG	2 cut(s)	78, 866
BseNI	ACTGG	2 cut(s)	211, 481
BseRI	GAGGAG	2 cut(s)	375, 1007
BseSI	GKGCMC	1 cut(s)	723
BseXI	GCAGC	2 cut(s)	213, 903
BsgI	GTGCAG	1 cut(s)	357
Bsh1236I	CGCG	1 cut(s)	316
BshFI	GGCC	1 cut(s)	437
BshNI	GGYRCC	1 cut(s)	720
BsiSI	CCGG	2 cut(s)	96, 157
BslI	CCNNNNNNNGG	2 cut(s)	730, 857
BsmAI	GTCTC	2 cut(s)	249, 464
BsmI	GAATGC	1 cut(s)	976
BsnI	GGCC	1 cut(s)	437
Bso31I	GGTCTC	2 cut(s)	249, 464
Bsp1286I	GDGCHC	2 cut(s)	103, 723
Bsp1407I	TGTACA	1 cut(s)	927
Bsp143I	GATC	5 cut(s)	106, 494, 554, 741, 847
Bsp1720I	GCTNAGC	1 cut(s)	87
BspACI	CCGC	2 cut(s)	33, 316
BspANI	GGCC	1 cut(s)	437
BspCNI	CTCAG	2 cut(s)	79, 865
BspFNI	CGCG	1 cut(s)	316
BspLI	GGNNCC	2 cut(s)	100, 722
BspMAI	CTGCAG	1 cut(s)	1084
BspPI	GGATC	1 cut(s)	842
BspT107I	GGYRCC	1 cut(s)	720
BspTI	CTTAAG	1 cut(s)	737
BspTNI	GGTCTC	2 cut(s)	249, 464
BsrFI	RCCGGY	1 cut(s)	156
BsrGI	TGTACA	1 cut(s)	927
BsrI	ACTGG	2 cut(s)	211, 481
BssAI	RCCGGY	1 cut(s)	156
BssECI	CCNNGG	2 cut(s)	454, 468
BssMI	GATC	5 cut(s)	106, 494, 554, 741, 847
BssT1I	CCWWGG	1 cut(s)	468
Bst4CI	ACNGT	2 cut(s)	46, 725
Bst6I	CTCTTC	1 cut(s)	154
BstAFI	CTTAAG	1 cut(s)	737
BstAPI	GCANNNNNTGC	1 cut(s)	270
BstAUI	TGTACA	1 cut(s)	927
BstC8I	GCNNGC	1 cut(s)	158
BstDEI	CTNAG	2 cut(s)	87, 852
BstFNI	CGCG	1 cut(s)	316
BstKTI	GATC	5 cut(s)	109, 497, 557, 744, 850
BstMAI	GTCTC	2 cut(s)	249, 464
BstMBI	GATC	5 cut(s)	106, 494, 554, 741, 847
BstMWI	GCNNNNNNNGC	3 cut(s)	83, 270, 922
BstSCI	CCNGG	1 cut(s)	94
BstSFI	CTRYAG	1 cut(s)	1080
BstSLI	GKGCMC	1 cut(s)	723
BstUI	CGCG	1 cut(s)	316
BstV1I	GCAGC	2 cut(s)	213, 903
BstV2I	GAAGAC	1 cut(s)	135
BsuI	GTATCC	1 cut(s)	641
BsuRI	GGCC	1 cut(s)	437
BtsIMutI	CAGTG	1 cut(s)	954
Cac8I	GCNNGC	1 cut(s)	158
CaiI	CAGNNNCTG	1 cut(s)	344
Cfr10I	RCCGGY	1 cut(s)	156
Cfr13I	GGNCC	3 cut(s)	123, 290, 733
Csp6I	GTAC	1 cut(s)	928
CviAII	CATG	4 cut(s)	299, 377, 653, 826
CviQI	GTAC	1 cut(s)	928
DdeI	CTNAG	2 cut(s)	87, 852
DpnI	GATC	5 cut(s)	108, 496, 556, 743, 849
DpnII	GATC	5 cut(s)	106, 494, 554, 741, 847
Eam1104I	CTCTTC	1 cut(s)	154
EarI	CTCTTC	1 cut(s)	154
Eco130I	CCWWGG	1 cut(s)	468
Eco24I	GRGCYC	1 cut(s)	103
Eco31I	GGTCTC	2 cut(s)	249, 464
Eco47I	GGWCC	3 cut(s)	123, 290, 733
Eco57I	CTGAAG	2 cut(s)	171, 866
EcoO109I	RGGNCCY	2 cut(s)	290, 733
EcoT14I	CCWWGG	1 cut(s)	468
EcoT38I	GRGCYC	1 cut(s)	103
ErhI	CCWWGG	1 cut(s)	468
FaeI	CATG	4 cut(s)	302, 380, 656, 829
FalI	AAGNNNNNCTT	2 cut(s)	127, 159
FatI	CATG	4 cut(s)	298, 376, 652, 825
FauI	CCCGC	1 cut(s)	309
Fnu4HI	GCNGC	2 cut(s)	227, 917
FriOI	GRGCYC	1 cut(s)	103
Fsp4HI	GCNGC	2 cut(s)	227, 917
FspBI	CTAG	1 cut(s)	1056
GluI	GCNGC	2 cut(s)	227, 917
HaeIII	GGCC	1 cut(s)	437
HapII	CCGG	2 cut(s)	96, 157
Hin1II	CATG	4 cut(s)	302, 380, 656, 829
HinfI	GANTC	5 cut(s)	275, 393, 672, 877, 1047
HpaII	CCGG	2 cut(s)	96, 157
Hpy188I	TCNGA	7 cut(s)	18, 50, 134, 484, 677, 855, 1030
Hpy188III	TCNNGA	4 cut(s)	558, 731, 884, 966
Hpy99I	CGWCG	1 cut(s)	179
HpyAV	CCTTC	4 cut(s)	195, 303, 749, 1086
HpyCH4III	ACNGT	2 cut(s)	46, 725
HpyF10VI	GCNNNNNNNGC	3 cut(s)	83, 270, 922
HpyF3I	CTNAG	2 cut(s)	87, 852
Hsp92II	CATG	4 cut(s)	302, 380, 656, 829
KroI	GCCGGC	1 cut(s)	156
KroNI	GCCGGC	1 cut(s)	158
Kzo9I	GATC	5 cut(s)	106, 494, 554, 741, 847
LmnI	GCTCC	1 cut(s)	98
Lsp1109I	GCAGC	2 cut(s)	213, 903
LweI	GCATC	1 cut(s)	331
MaeI	CTAG	1 cut(s)	1056
MaeIII	GTNAC	3 cut(s)	161, 415, 781
MalI	GATC	5 cut(s)	108, 496, 556, 743, 849
MboI	GATC	5 cut(s)	106, 494, 554, 741, 847
MboII	GAAGA	5 cut(s)	135, 141, 232, 872, 954
MfeI	CAATTG	1 cut(s)	303
MhlI	GDGCHC	2 cut(s)	103, 723
MluCI	AATT	5 cut(s)	303, 421, 831, 863, 1061
MlyI	GAGTC	1 cut(s)	284
MmeI	TCCRAC	1 cut(s)	550
MreI	CGCCGGCG	1 cut(s)	156
MroNI	GCCGGC	1 cut(s)	156
MroXI	GAANNNNTTC	1 cut(s)	392
MseI	TTAA	5 cut(s)	12, 281, 612, 738, 911
MslI	CAYNNNNRTG	1 cut(s)	633
MspCI	CTTAAG	1 cut(s)	737
MspI	CCGG	2 cut(s)	96, 157
MspR9I	CCNGG	1 cut(s)	96
MunI	CAATTG	1 cut(s)	303
Mva1269I	GAATGC	1 cut(s)	976
MvnI	CGCG	1 cut(s)	316
MwoI	GCNNNNNNNGC	3 cut(s)	83, 270, 922
NaeI	GCCGGC	1 cut(s)	158
NciI	CCSGG	1 cut(s)	96
NdeII	GATC	5 cut(s)	106, 494, 554, 741, 847
NgoMIV	GCCGGC	1 cut(s)	156
NlaIII	CATG	4 cut(s)	302, 380, 656, 829
NlaIV	GGNNCC	2 cut(s)	100, 722
NmeAIII	GCCGAG	1 cut(s)	142
NmuCI	GTSAC	1 cut(s)	161
OliI	CACNNNNGTG	1 cut(s)	633
PctI	GAATGC	1 cut(s)	976
PdiI	GCCGGC	1 cut(s)	158
PdmI	GAANNNNTTC	1 cut(s)	392
PfeI	GAWTC	4 cut(s)	393, 672, 877, 1047
PfoI	TCCNGGA	1 cut(s)	94
PkrI	GCNGC	2 cut(s)	228, 918
PleI	GAGTC	1 cut(s)	283
PpsI	GAGTC	1 cut(s)	283
PpuMI	RGGWCCY	2 cut(s)	290, 733
PshBI	ATTAAT	1 cut(s)	12
Psp5II	RGGWCCY	2 cut(s)	290, 733
PspN4I	GGNNCC	2 cut(s)	100, 722
PspPI	GGNCC	3 cut(s)	123, 290, 733
PspPPI	RGGWCCY	2 cut(s)	290, 733
PstI	CTGCAG	1 cut(s)	1084
PstNI	CAGNNNCTG	1 cut(s)	344
RsaI	GTAC	1 cut(s)	929
RsaNI	GTAC	1 cut(s)	928
RseI	CAYNNNNRTG	1 cut(s)	633
SaqAI	TTAA	5 cut(s)	12, 281, 612, 738, 911
SatI	GCNGC	2 cut(s)	227, 917
Sau3AI	GATC	5 cut(s)	106, 494, 554, 741, 847
Sau96I	GGNCC	3 cut(s)	123, 290, 733
SchI	GAGTC	1 cut(s)	284
ScrFI	CCNGG	1 cut(s)	96
SduI	GDGCHC	2 cut(s)	103, 723
SfaNI	GCATC	1 cut(s)	331
SfcI	CTRYAG	1 cut(s)	1080
SgrAI	CRCCGGYG	1 cut(s)	156
SinI	GGWCC	3 cut(s)	123, 290, 733
SmiMI	CAYNNNNRTG	1 cut(s)	633
SmlI	CTYRAG	3 cut(s)	631, 737, 777
SmoI	CTYRAG	3 cut(s)	631, 737, 777
Sse9I	AATT	5 cut(s)	303, 421, 831, 863, 1061
SsiI	CCGC	2 cut(s)	33, 316
SspMI	CTAG	1 cut(s)	1056
StyD4I	CCNGG	1 cut(s)	94
StyI	CCWWGG	1 cut(s)	468
TaaI	ACNGT	2 cut(s)	46, 725
TaqI	TCGA	1 cut(s)	531
TaqII	GACCGA	1 cut(s)	446
TasI	AATT	5 cut(s)	303, 421, 831, 863, 1061
TatI	WGTACW	1 cut(s)	927
TfiI	GAWTC	4 cut(s)	393, 672, 877, 1047
Tru1I	TTAA	5 cut(s)	12, 281, 612, 738, 911
Tru9I	TTAA	5 cut(s)	12, 281, 612, 738, 911
TscAI	CASTG	1 cut(s)	954
TseFI	GTSAC	1 cut(s)	161
TseI	GCWGC	2 cut(s)	226, 916
Tsp45I	GTSAC	1 cut(s)	161
TspDTI	ATGAA	4 cut(s)	537, 609, 768, 842
TspGWI	ACGGA	2 cut(s)	222, 507
TspRI	CASTG	1 cut(s)	954
Vha464I	CTTAAG	1 cut(s)	737
VpaK11BI	GGWCC	3 cut(s)	123, 290, 733
VspI	ATTAAT	1 cut(s)	12
XapI	RAATTY	2 cut(s)	863, 1061
XmnI	GAANNNNTTC	1 cut(s)	392
XspI	CTAG	1 cut(s)	1056

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.