Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0015431

Physical Location & Seq

Genomic Coordinates Forward (+)

19211410 .. 19215304

Gene Structure 3895 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1132800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1110 bp

ATGGGCATTAATCTGATAGCATTCGGAGGTGGTGGTGGAATAGCAGTAGGAGGAGGAGTGAGAGTTTCAATGGCGACACCATGGGCTGTGAGAGCCGAGCTCCCCAAAGCTCCTGATCTGTGCGCTGACCGCTCCATTCTGCGAAGTGGGTCTTCCTCCTCTCGCCGCCGCGACCTCGTTTTCGTCGTCAATCCCAGCGGTGCGAATGGGAGGACAGGGAATGAGTGGAAGAAGCTGCTTCCATATCTAAGGTCTCGCCTTGGCGCTGATTGCAATATATGTGAATCTTTGACATCAGGTCCTTCTCATGCGATTGACATAACGAGAGAGGCTATACGGGAAGGAGCTGATGCTGTAATTGTGGTGGGAGGAGATGGAACTCTGCATGAGGTTGTTAATGGATTCTTTTGGGCAGGAAAACCTGTTACTAATTATGATAGGGATGCCACCCGTTCAACTGCACTCGGTCTCATTCCTTTGGGGACAGGGTCAGATTTTGCCAGATCATTTGGCTGGAAAAATGATCCTTGTGAAGCCATTGACCGCATTGCCAAAGGGCGGAGATCATGGATAGATGTTGGTGTTATTAGTGGAGAAGACGGAGAACCTCATTACTTTGTTAATGTTGCTGACATTCATTTGAGTGCAAAAGCAGGATACCATGCTTCTAGTTTCAAGAGATTTGGAAACTTGTGCTACGTTATTGGTTCTTTAAAAGCCTTTGTTGGGCACCGTAATCAGGACCTTAAAATCAAGGTCAATGAAGGGGAGTGGGAAGTGTACTCTCAAGTAACAGCCCTTTGTGTTGGAAACGCAAAATACTTTGGTGGTGGTATGAAAATTACACCAAATGCTGACCCTCGCAGCGGCAATTTTGAGGTTGTGATTCTTCAGGACTTCAGGTGGTATGACTTTGTTCTGAAGTTACATAAGCTCTATAATGGGACACATCTAACAGTGAAAAATGTATCTTCGAGAAGCGTGCATTCTATTGAGGTGGAAGACATTTCAGGCAGTGGTAACATTTATGTTCAATCTGATGGCGAACATTTAGGATTCCTGCCAAGGAAGTTTAGTATATTACCTTCTGCGGTTGAGATGATATGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004143 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005886 GO:0006066 GO:0006629 GO:0006643 GO:0006664 GO:0006665 GO:0006671 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009247 GO:0009266 GO:0009409 GO:0009628 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017050 GO:0019751 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046467 GO:0046519 GO:0050896 GO:0071704 GO:0071944 GO:0097164 GO:1901135 GO:1901137 GO:1901564 GO:1901576 GO:1901615 GO:1903509

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DAGK_cat

Protein Analysis

370

Amino Acids

39.94

Weight (kDa)

8.4

Isoelectric Point (pI)

37.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DAGK_cat	PF00781	59 - 195	5e-27	Diacylglycerol kinase catalytic domain
YegS_C	PF19279	216 - 368	1.3e-25	YegS C-terminal NAD kinase beta sandwich-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015431)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46090
fragaria_vesca	FvH4_7g15100
malus_domestica	MD01G1069600.v1.1 MD07G1132800.v1.1
prunus_persica	Prupe.2G175700_v2.0.a1
pyrus_communis	pycom01g09890 pycom07g12960
rosa_chinensis	RchiOBHm_Chr1g0357291
rosa_laevigata	RLG00000028030
rosa_rugosa	Rorug01G0256100
rosa_samantha	Rh1AG269400 Rh1BG237300 Rh1CG253600 Rh1DG265200
rosa_wichuraiana	Rw1G023860 Rw1G024000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	729
AccBSI	CCGCTC	1 cut(s)	132
AccII	CGCG	1 cut(s)	171
AciI	CCGC	8 cut(s)	130, 166, 169, 198, 544, 559, 867, 1091
AclWI	GGATC	1 cut(s)	518
AcuI	CTGAAG	3 cut(s)	875, 883, 941
AfaI	GTAC	1 cut(s)	782
AfiI	CCNNNNNNNGG	4 cut(s)	558, 726, 739, 866
AgsI	TTSAA	4 cut(s)	69, 456, 676, 1034
AhdI	GACNNNNNGTC	1 cut(s)	297
AluBI	AGCT	5 cut(s)	100, 110, 235, 347, 934
AluI	AGCT	5 cut(s)	100, 110, 235, 347, 934
Alw21I	GWGCWC	1 cut(s)	102
Alw26I	GTCTC	2 cut(s)	258, 473
AlwI	GGATC	1 cut(s)	518
ApeKI	GCWGC	2 cut(s)	235, 864
ArsI	GACNNNNNNTTYG	2 cut(s)	164, 196
AseI	ATTAAT	1 cut(s)	9
AspLEI	GCGC	2 cut(s)	125, 266
AspS9I	GGNCC	2 cut(s)	299, 742
AvaII	GGWCC	2 cut(s)	299, 742
BaeGI	GKGCMC	1 cut(s)	732
BanI	GGYRCC	1 cut(s)	729
BanII	GRGCYC	1 cut(s)	102
BarI	GAAGNNNNNNTAC	2 cut(s)	1069, 1101
BbsI	GAAGAC	3 cut(s)	144, 603, 1008
Bbv12I	GWGCWC	1 cut(s)	102
BbvI	GCAGC	2 cut(s)	222, 876
BccI	CCATC	2 cut(s)	368, 1034
BcgI	CGANNNNNNTGC	2 cut(s)	964, 998
BciVI	GTATCC	1 cut(s)	650
BcoDI	GTCTC	2 cut(s)	258, 473
BfaI	CTAG	1 cut(s)	669
BfoI	RGCGCY	1 cut(s)	267
BfuI	GTATCC	1 cut(s)	650
BisI	GCNGC	5 cut(s)	166, 169, 236, 865, 868
BlsI	GCNGC	5 cut(s)	167, 170, 237, 866, 869
Bme18I	GGWCC	2 cut(s)	299, 742
BmeRI	GACNNNNNGTC	1 cut(s)	297
BmgT120I	GGNCC	2 cut(s)	299, 742
BmiI	GGNNCC	1 cut(s)	731
BmsI	GCATC	2 cut(s)	340, 433
BpiI	GAAGAC	3 cut(s)	144, 603, 1008
BplI	GAGNNNNNCTC	2 cut(s)	84, 116
BpuEI	CTTGAG	1 cut(s)	771
BsaI	GGTCTC	2 cut(s)	258, 473
BsaJI	CCNNGG	3 cut(s)	80, 259, 1064
BsaXI	ACNNNNNCTCC	4 cut(s)	42, 48, 72, 78
Bsc4I	CCNNNNNNNGG	4 cut(s)	558, 726, 739, 866
Bse3DI	GCAATG	1 cut(s)	546
BseDI	CCNNGG	3 cut(s)	80, 259, 1064
BseGI	GGATG	1 cut(s)	448
BseLI	CCNNNNNNNGG	4 cut(s)	558, 726, 739, 866
BseMI	GCAATG	1 cut(s)	546
BseRI	GAGGAG	4 cut(s)	66, 69, 148, 384
BseSI	GKGCMC	1 cut(s)	732
BseXI	GCAGC	2 cut(s)	222, 876
BseYI	CCCAGC	1 cut(s)	194
BsgI	GTGCAG	1 cut(s)	444
Bsh1236I	CGCG	1 cut(s)	171
BshNI	GGYRCC	1 cut(s)	729
BsiHKAI	GWGCWC	1 cut(s)	102
BslFI	GGGAC	2 cut(s)	496, 958
BslI	CCNNNNNNNGG	4 cut(s)	558, 726, 739, 866
BsmAI	GTCTC	2 cut(s)	258, 473
BsmFI	GGGAC	2 cut(s)	496, 958
BsmI	GAATGC	2 cut(s)	20, 985
Bso31I	GGTCTC	2 cut(s)	258, 473
Bsp1286I	GDGCHC	2 cut(s)	102, 732
Bsp143I	GATC	4 cut(s)	115, 503, 523, 563
Bsp19I	CCATGG	1 cut(s)	80
BspACI	CCGC	8 cut(s)	130, 166, 169, 198, 544, 559, 867, 1091
BspFNI	CGCG	1 cut(s)	171
BspLI	GGNNCC	1 cut(s)	731
BspPI	GGATC	1 cut(s)	518
BspT107I	GGYRCC	1 cut(s)	729
BspTNI	GGTCTC	2 cut(s)	258, 473
BsrBI	CCGCTC	1 cut(s)	132
BsrDI	GCAATG	1 cut(s)	546
BssECI	CCNNGG	3 cut(s)	80, 259, 1064
BssMI	GATC	4 cut(s)	115, 503, 523, 563
BssT1I	CCWWGG	3 cut(s)	80, 259, 1064
Bst4CI	ACNGT	2 cut(s)	734, 958
BstC8I	GCNNGC	1 cut(s)	983
BstDEI	CTNAG	1 cut(s)	248
BstDSI	CCRYGG	1 cut(s)	80
BstF5I	GGATG	1 cut(s)	448
BstFNI	CGCG	1 cut(s)	171
BstH2I	RGCGCY	1 cut(s)	267
BstHHI	GCGC	2 cut(s)	125, 266
BstKTI	GATC	4 cut(s)	118, 506, 526, 566
BstMAI	GTCTC	2 cut(s)	258, 473
BstMBI	GATC	4 cut(s)	115, 503, 523, 563
BstMWI	GCNNNNNNNGC	3 cut(s)	92, 129, 270
BstSLI	GKGCMC	1 cut(s)	732
BstUI	CGCG	1 cut(s)	171
BstV1I	GCAGC	2 cut(s)	222, 876
BstV2I	GAAGAC	3 cut(s)	144, 603, 1008
BsuI	GTATCC	1 cut(s)	650
BtgI	CCRYGG	1 cut(s)	80
BtsCI	GGATG	1 cut(s)	448
BtsI	GCAGTG	1 cut(s)	1021
BtsIMutI	CAGTG	2 cut(s)	963, 1021
Cac8I	GCNNGC	1 cut(s)	983
CfoI	GCGC	2 cut(s)	125, 266
Cfr13I	GGNCC	2 cut(s)	299, 742
Csp6I	GTAC	1 cut(s)	781
CviAII	CATG	5 cut(s)	81, 308, 386, 567, 662
CviQI	GTAC	1 cut(s)	781
DdeI	CTNAG	1 cut(s)	248
DpnI	GATC	4 cut(s)	117, 505, 525, 565
DpnII	GATC	4 cut(s)	115, 503, 523, 563
DraI	TTTAAA	1 cut(s)	714
DriI	GACNNNNNGTC	1 cut(s)	297
Eam1105I	GACNNNNNGTC	1 cut(s)	297
EciI	GGCGGA	1 cut(s)	574
Ecl136II	GAGCTC	1 cut(s)	100
Eco130I	CCWWGG	3 cut(s)	80, 259, 1064
Eco24I	GRGCYC	1 cut(s)	102
Eco31I	GGTCTC	2 cut(s)	258, 473
Eco47I	GGWCC	2 cut(s)	299, 742
Eco53kI	GAGCTC	1 cut(s)	100
Eco57I	CTGAAG	3 cut(s)	875, 883, 941
EcoICRI	GAGCTC	1 cut(s)	100
EcoO109I	RGGNCCY	2 cut(s)	299, 742
EcoT14I	CCWWGG	3 cut(s)	80, 259, 1064
EcoT38I	GRGCYC	1 cut(s)	102
ErhI	CCWWGG	3 cut(s)	80, 259, 1064
FaeI	CATG	5 cut(s)	84, 311, 389, 570, 665
FalI	AAGNNNNNCTT	2 cut(s)	136, 168
FaqI	GGGAC	2 cut(s)	496, 958
FatI	CATG	5 cut(s)	80, 307, 385, 566, 661
Fnu4HI	GCNGC	5 cut(s)	166, 169, 236, 865, 868
FokI	GGATG	1 cut(s)	455
FriOI	GRGCYC	1 cut(s)	102
Fsp4HI	GCNGC	5 cut(s)	166, 169, 236, 865, 868
FspBI	CTAG	1 cut(s)	669
GlaI	GCGC	2 cut(s)	124, 265
GluI	GCNGC	5 cut(s)	166, 169, 236, 865, 868
GsaI	CCCAGC	1 cut(s)	198
HaeII	RGCGCY	1 cut(s)	267
HhaI	GCGC	2 cut(s)	125, 266
Hin1II	CATG	5 cut(s)	84, 311, 389, 570, 665
Hin6I	GCGC	2 cut(s)	123, 264
HinP1I	GCGC	2 cut(s)	123, 264
HinfI	GANTC	4 cut(s)	284, 402, 886, 1056
Hpy166II	GTNNAC	1 cut(s)	781
Hpy188I	TCNGA	5 cut(s)	15, 26, 493, 921, 1039
Hpy188III	TCNNGA	5 cut(s)	113, 676, 740, 893, 975
Hpy8I	GTNNAC	1 cut(s)	781
Hpy99I	CGWCG	1 cut(s)	188
HpyAV	CCTTC	4 cut(s)	312, 335, 758, 1095
HpyCH4III	ACNGT	2 cut(s)	734, 958
HpyCH4IV	ACGT	1 cut(s)	699
HpyCH4V	TGCA	5 cut(s)	273, 385, 461, 647, 985
HpyF10VI	GCNNNNNNNGC	3 cut(s)	92, 129, 270
HpyF3I	CTNAG	1 cut(s)	248
HpySE526I	ACGT	1 cut(s)	699
Hsp92II	CATG	5 cut(s)	84, 311, 389, 570, 665
HspAI	GCGC	2 cut(s)	123, 264
Kzo9I	GATC	4 cut(s)	115, 503, 523, 563
LmnI	GCTCC	4 cut(s)	105, 115, 137, 344
Lsp1109I	GCAGC	2 cut(s)	222, 876
LweI	GCATC	2 cut(s)	340, 433
MaeI	CTAG	1 cut(s)	669
MaeII	ACGT	1 cut(s)	699
MaeIII	GTNAC	4 cut(s)	424, 790, 924, 1019
MalI	GATC	4 cut(s)	117, 505, 525, 565
MbiI	CCGCTC	1 cut(s)	132
MboI	GATC	4 cut(s)	115, 503, 523, 563
MboII	GAAGA	6 cut(s)	144, 241, 608, 881, 963, 1013
MhlI	GDGCHC	2 cut(s)	102, 732
MluCI	AATT	4 cut(s)	357, 430, 840, 871
MmeI	TCCRAC	1 cut(s)	787
MseI	TTAA	5 cut(s)	9, 396, 621, 713, 747
MslI	CAYNNNNRTG	1 cut(s)	642
MspA1I	CMGCKG	2 cut(s)	198, 867
Mva1269I	GAATGC	2 cut(s)	20, 985
MvnI	CGCG	1 cut(s)	171
MwoI	GCNNNNNNNGC	3 cut(s)	92, 129, 270
NcoI	CCATGG	1 cut(s)	80
NdeII	GATC	4 cut(s)	115, 503, 523, 563
NlaIII	CATG	5 cut(s)	84, 311, 389, 570, 665
NlaIV	GGNNCC	1 cut(s)	731
NmeAIII	GCCGAG	1 cut(s)	121
PcsI	WCGNNNNNNNCGW	1 cut(s)	183
PctI	GAATGC	2 cut(s)	20, 985
PfeI	GAWTC	4 cut(s)	284, 402, 886, 1056
PflFI	GACNNNGTC	1 cut(s)	487
PkrI	GCNGC	5 cut(s)	167, 170, 237, 866, 869
PpuMI	RGGWCCY	2 cut(s)	299, 742
PshBI	ATTAAT	1 cut(s)	9
Psp124BI	GAGCTC	1 cut(s)	102
Psp5II	RGGWCCY	2 cut(s)	299, 742
PspFI	CCCAGC	1 cut(s)	194
PspN4I	GGNNCC	1 cut(s)	731
PspPI	GGNCC	2 cut(s)	299, 742
PspPPI	RGGWCCY	2 cut(s)	299, 742
PsyI	GACNNNGTC	1 cut(s)	487
RsaI	GTAC	1 cut(s)	782
RsaNI	GTAC	1 cut(s)	781
RseI	CAYNNNNRTG	1 cut(s)	642
SacI	GAGCTC	1 cut(s)	102
SaqAI	TTAA	5 cut(s)	9, 396, 621, 713, 747
SatI	GCNGC	5 cut(s)	166, 169, 236, 865, 868
Sau3AI	GATC	4 cut(s)	115, 503, 523, 563
Sau96I	GGNCC	2 cut(s)	299, 742
SduI	GDGCHC	2 cut(s)	102, 732
SfaNI	GCATC	2 cut(s)	340, 433
SinI	GGWCC	2 cut(s)	299, 742
SmiMI	CAYNNNNRTG	1 cut(s)	642
SmlI	CTYRAG	1 cut(s)	786
SmoI	CTYRAG	1 cut(s)	786
Sse9I	AATT	4 cut(s)	357, 430, 840, 871
SsiI	CCGC	8 cut(s)	130, 166, 169, 198, 544, 559, 867, 1091
SspMI	CTAG	1 cut(s)	669
SstI	GAGCTC	1 cut(s)	102
StyI	CCWWGG	3 cut(s)	80, 259, 1064
TaaI	ACNGT	2 cut(s)	734, 958
TaiI	ACGT	1 cut(s)	702
TaqI	TCGA	1 cut(s)	974
TaqII	GACCGA	1 cut(s)	455
TasI	AATT	4 cut(s)	357, 430, 840, 871
TatI	WGTACW	1 cut(s)	780
TauI	GCSGC	3 cut(s)	168, 171, 870
TfiI	GAWTC	4 cut(s)	284, 402, 886, 1056
Tru1I	TTAA	5 cut(s)	9, 396, 621, 713, 747
Tru9I	TTAA	5 cut(s)	9, 396, 621, 713, 747
TscAI	CASTG	2 cut(s)	963, 1021
TseI	GCWGC	2 cut(s)	235, 864
TspDTI	ATGAA	3 cut(s)	626, 777, 851
TspGWI	ACGGA	1 cut(s)	615
TspRI	CASTG	2 cut(s)	963, 1021
Tth111I	GACNNNGTC	1 cut(s)	487
VpaK11BI	GGWCC	2 cut(s)	299, 742
VspI	ATTAAT	1 cut(s)	9
XspI	CTAG	1 cut(s)	669

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.