Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0015431

Physical Location & Seq

Genomic Coordinates Reverse (-)

22128418 .. 22131549

Gene Structure 3132 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G175700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1095 bp

ATGAGCATGAATCAGATAGCATTTGGAACTGGAATAACAGGGGTGAGAGTATCAATGGCGAAACCATGGGCTGTCAGAGCAGAGCTACCCAAGGCTCCTGATCTATGTGCTGACCGCTCTTTTTTGCGAAGTGGGTCTTCCTCCTTTCGCCGTCGTGACCTCGTTTTCGTCGTCAATCCTAGCGGTGCCAATGGGAGGACAGGTAAAGAGTGGAAGAAGCTGCTGCCATATCTAAGGTCTCGCCTTGGTGCCGATTGCAATCTATGCGAATCTTTAACATCAGGTCCTTCTCATGCAATTGACATAACGAGAGAGGCTATAAGGGAGGGTGCTGATGCTGTAATAGTGGTGGGAGGAGATGGAACTCTGCATGAGGTTGTCAATGGATTCTTTTGGGCAGGAAAACCAGTTACTAATCATGATAGAGAGGTCACCCATTCAACTGCACTCGGTCTTATTCCTTTGGGGACTGGGTCTGATTTTGCCCGAACTTTTGGCTGGAAAAATGATCCTCATGAAGCCATTGACCGCATAGCCAAAGGGCAGAGATCACGGATAGATGTTGGTGTTATTAGTGGAGAAGATGGAGAACCTCATTACTTTGTTAATGTTGCTGACATTCATTTGAGTGCAAAAGCAGGATACTATGCTTCTAGATACAAGAGATTTGGCAACTTGTGCTATGTTATTGGTGCTTTGAAAGCCTTTGTTGGGCACCGTAATCAGGACCTTAAAATCAAGGTCAATGAAGGGGAGTGGGAACTATACTCTCAAGTAACAGCCCTTTGCATCGGAAATGCAAAATTCTTTGGCGGTGGCATGAAAATTACACCAAATGCTGACCCTCACAGCGGCAATTTTGAGGTTGTGATTCTTCAGGACTTCAAGTGGTATGACTTTATACTGAAGCTACATAAGCTGTACAATGGGACACATCTAACAGTGAAAAATGTATCTTCAAGAAGCGTGCACTCTATTGAAGTGGAAGACGTCTCAGGCAGTGGAAGCATTTATGTTCAATCTGATGGTGAACATTTAGGATTCCTGCCTAGGAAATTTTGTATATTACCTTCTGCAGTCGAGATGATATGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004143 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005886 GO:0006066 GO:0006629 GO:0006643 GO:0006664 GO:0006665 GO:0006671 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009247 GO:0009266 GO:0009409 GO:0009628 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017050 GO:0019751 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046467 GO:0046519 GO:0050896 GO:0071704 GO:0071944 GO:0097164 GO:1901135 GO:1901137 GO:1901564 GO:1901576 GO:1901615 GO:1903509

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DAGK_cat

Protein Analysis

365

Amino Acids

39.92

Weight (kDa)

8.58

Isoelectric Point (pI)

27.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015431)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46090
fragaria_vesca	FvH4_7g15100
malus_domestica	MD01G1069600.v1.1 MD07G1132800.v1.1
prunus_persica	Prupe.2G175700_v2.0.a1
pyrus_communis	pycom01g09890 pycom07g12960
rosa_chinensis	RchiOBHm_Chr1g0357291
rosa_laevigata	RLG00000028030
rosa_rugosa	Rorug01G0256100
rosa_samantha	Rh1AG269400 Rh1BG237300 Rh1CG253600 Rh1DG265200
rosa_wichuraiana	Rw1G023860 Rw1G024000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	993
AccB1I	GGYRCC	3 cut(s)	185, 248, 714
AccBSI	CCGCTC	1 cut(s)	117
AciI	CCGC	5 cut(s)	115, 183, 529, 813, 852
AclWI	GGATC	1 cut(s)	503
AcsI	RAATTY	2 cut(s)	803, 1055
AcuI	CTGAAG	2 cut(s)	860, 926
AcyI	GRCGYC	1 cut(s)	990
AfaI	GTAC	1 cut(s)	923
AfiI	CCNNNNNNNGG	4 cut(s)	195, 711, 724, 851
AgsI	TTSAA	6 cut(s)	441, 700, 886, 960, 980, 1019
AluBI	AGCT	4 cut(s)	85, 220, 910, 919
AluI	AGCT	4 cut(s)	85, 220, 910, 919
Alw21I	GWGCWC	1 cut(s)	972
Alw26I	GTCTC	2 cut(s)	243, 997
Alw44I	GTGCAC	1 cut(s)	968
AlwI	GGATC	1 cut(s)	503
ApaLI	GTGCAC	1 cut(s)	968
ApeKI	GCWGC	2 cut(s)	220, 223
ApoI	RAATTY	2 cut(s)	803, 1055
ArsI	GACNNNNNNTTYG	2 cut(s)	149, 181
AspA2I	CCTAGG	1 cut(s)	1049
AspS9I	GGNCC	2 cut(s)	284, 727
AsuHPI	GGTGA	3 cut(s)	55, 424, 1040
AvaII	GGWCC	2 cut(s)	284, 727
AvrII	CCTAGG	1 cut(s)	1049
BaeGI	GKGCMC	2 cut(s)	717, 972
BanI	GGYRCC	3 cut(s)	185, 248, 714
BarI	GAAGNNNNNNTAC	2 cut(s)	1054, 1086
BbsI	GAAGAC	2 cut(s)	129, 993
Bbv12I	GWGCWC	1 cut(s)	972
BbvI	GCAGC	2 cut(s)	207, 210
BccI	CCATC	3 cut(s)	353, 578, 1019
BceAI	ACGGC	1 cut(s)	135
BciVI	GTATCC	1 cut(s)	635
BcoDI	GTCTC	2 cut(s)	243, 997
BfaI	CTAG	3 cut(s)	180, 654, 1050
BfmI	CTRYAG	1 cut(s)	1074
BfuI	GTATCC	1 cut(s)	635
BisI	GCNGC	3 cut(s)	221, 224, 853
BlnI	CCTAGG	1 cut(s)	1049
BlsI	GCNGC	3 cut(s)	222, 225, 854
Bme18I	GGWCC	2 cut(s)	284, 727
BmgT120I	GGNCC	2 cut(s)	284, 727
BmiI	GGNNCC	4 cut(s)	96, 187, 250, 716
BmrI	ACTGGG	1 cut(s)	480
BmsI	GCATC	2 cut(s)	325, 798
BmuI	ACTGGG	1 cut(s)	480
BpiI	GAAGAC	2 cut(s)	129, 993
BpuEI	CTTGAG	1 cut(s)	756
BsaBI	GATNNNNATC	1 cut(s)	258
BsaHI	GRCGYC	1 cut(s)	990
BsaI	GGTCTC	1 cut(s)	243
BsaJI	CCNNGG	4 cut(s)	65, 90, 244, 1049
BsaXI	ACNNNNNCTCC	2 cut(s)	187, 217
Bsc4I	CCNNNNNNNGG	4 cut(s)	195, 711, 724, 851
Bse1I	ACTGG	3 cut(s)	34, 407, 475
Bse8I	GATNNNNATC	1 cut(s)	258
BseDI	CCNNGG	4 cut(s)	65, 90, 244, 1049
BseJI	GATNNNNATC	1 cut(s)	258
BseLI	CCNNNNNNNGG	4 cut(s)	195, 711, 724, 851
BseMII	CTCAG	1 cut(s)	1008
BseNI	ACTGG	3 cut(s)	34, 407, 475
BseRI	GAGGAG	1 cut(s)	369
BseSI	GKGCMC	2 cut(s)	717, 972
BseXI	GCAGC	2 cut(s)	207, 210
BsgI	GTGCAG	1 cut(s)	429
BshNI	GGYRCC	3 cut(s)	185, 248, 714
BsiHKAI	GWGCWC	1 cut(s)	972
BslFI	GGGAC	2 cut(s)	481, 943
BslI	CCNNNNNNNGG	4 cut(s)	195, 711, 724, 851
BsmAI	GTCTC	2 cut(s)	243, 997
BsmBI	CGTCTC	1 cut(s)	997
BsmFI	GGGAC	2 cut(s)	481, 943
Bso31I	GGTCTC	1 cut(s)	243
Bsp1286I	GDGCHC	2 cut(s)	717, 972
Bsp1407I	TGTACA	1 cut(s)	921
Bsp143I	GATC	3 cut(s)	100, 508, 548
Bsp19I	CCATGG	1 cut(s)	65
BspACI	CCGC	5 cut(s)	115, 183, 529, 813, 852
BspCNI	CTCAG	1 cut(s)	1007
BspHI	TCATGA	2 cut(s)	418, 514
BspLI	GGNNCC	4 cut(s)	96, 187, 250, 716
BspMAI	CTGCAG	1 cut(s)	1078
BspPI	GGATC	1 cut(s)	503
BspT107I	GGYRCC	3 cut(s)	185, 248, 714
BspTNI	GGTCTC	1 cut(s)	243
BsrBI	CCGCTC	1 cut(s)	117
BsrGI	TGTACA	1 cut(s)	921
BsrI	ACTGG	3 cut(s)	34, 407, 475
BssECI	CCNNGG	4 cut(s)	65, 90, 244, 1049
BssMI	GATC	3 cut(s)	100, 508, 548
BssNI	GRCGYC	1 cut(s)	990
BssT1I	CCWWGG	4 cut(s)	65, 90, 244, 1049
Bst4CI	ACNGT	2 cut(s)	719, 943
BstACI	GRCGYC	1 cut(s)	990
BstAPI	GCANNNNNTGC	2 cut(s)	264, 678
BstAUI	TGTACA	1 cut(s)	921
BstC8I	GCNNGC	1 cut(s)	968
BstDEI	CTNAG	2 cut(s)	233, 994
BstDSI	CCRYGG	1 cut(s)	65
BstEII	GGTNACC	1 cut(s)	430
BstKTI	GATC	3 cut(s)	103, 511, 551
BstMAI	GTCTC	2 cut(s)	243, 997
BstMBI	GATC	3 cut(s)	100, 508, 548
BstMWI	GCNNNNNNNGC	6 cut(s)	77, 264, 678, 701, 916, 1005
BstPI	GGTNACC	1 cut(s)	430
BstSFI	CTRYAG	1 cut(s)	1074
BstSLI	GKGCMC	2 cut(s)	717, 972
BstV1I	GCAGC	2 cut(s)	207, 210
BstV2I	GAAGAC	2 cut(s)	129, 993
BsuI	GTATCC	1 cut(s)	635
BtgI	CCRYGG	1 cut(s)	65
BtsI	GCAGTG	1 cut(s)	1006
BtsIMutI	CAGTG	2 cut(s)	948, 1006
Cac8I	GCNNGC	1 cut(s)	968
CciI	TCATGA	2 cut(s)	418, 514
Cfr13I	GGNCC	2 cut(s)	284, 727
Csp6I	GTAC	1 cut(s)	922
CviAII	CATG	7 cut(s)	7, 66, 293, 371, 419, 515, 820
CviQI	GTAC	1 cut(s)	922
DdeI	CTNAG	2 cut(s)	233, 994
DpnI	GATC	3 cut(s)	102, 510, 550
DpnII	GATC	3 cut(s)	100, 508, 548
Eco130I	CCWWGG	4 cut(s)	65, 90, 244, 1049
Eco31I	GGTCTC	1 cut(s)	243
Eco47I	GGWCC	2 cut(s)	284, 727
Eco57I	CTGAAG	2 cut(s)	860, 926
Eco91I	GGTNACC	1 cut(s)	430
EcoO109I	RGGNCCY	2 cut(s)	284, 727
EcoO65I	GGTNACC	1 cut(s)	430
EcoT14I	CCWWGG	4 cut(s)	65, 90, 244, 1049
ErhI	CCWWGG	4 cut(s)	65, 90, 244, 1049
Esp3I	CGTCTC	1 cut(s)	997
FaeI	CATG	7 cut(s)	10, 69, 296, 374, 422, 518, 823
FalI	AAGNNNNNCTT	2 cut(s)	121, 153
FaqI	GGGAC	2 cut(s)	481, 943
FatI	CATG	7 cut(s)	6, 65, 292, 370, 418, 514, 819
Fnu4HI	GCNGC	3 cut(s)	221, 224, 853
Fsp4HI	GCNGC	3 cut(s)	221, 224, 853
FspBI	CTAG	3 cut(s)	180, 654, 1050
GluI	GCNGC	3 cut(s)	221, 224, 853
Hin1I	GRCGYC	1 cut(s)	990
Hin1II	CATG	7 cut(s)	10, 69, 296, 374, 422, 518, 823
HinfI	GANTC	5 cut(s)	10, 269, 387, 871, 1041
HphI	GGTGA	3 cut(s)	55, 424, 1040
Hpy166II	GTNNAC	2 cut(s)	970, 1031
Hpy188I	TCNGA	5 cut(s)	15, 77, 478, 794, 1024
Hpy188III	TCNNGA	9 cut(s)	98, 155, 419, 515, 654, 725, 878, 960, 1081
Hpy8I	GTNNAC	2 cut(s)	970, 1031
Hpy99I	CGWCG	2 cut(s)	156, 173
HpyAV	CCTTC	3 cut(s)	297, 743, 1080
HpyCH4III	ACNGT	2 cut(s)	719, 943
HpyCH4IV	ACGT	1 cut(s)	990
HpyCH4V	TGCA	9 cut(s)	258, 296, 370, 446, 632, 789, 800, 970, 1076
HpyF10VI	GCNNNNNNNGC	6 cut(s)	77, 264, 678, 701, 916, 1005
HpyF3I	CTNAG	2 cut(s)	233, 994
HpySE526I	ACGT	1 cut(s)	990
Hsp92I	GRCGYC	1 cut(s)	990
Hsp92II	CATG	7 cut(s)	10, 69, 296, 374, 422, 518, 823
Kzo9I	GATC	3 cut(s)	100, 508, 548
LmnI	GCTCC	1 cut(s)	100
Lsp1109I	GCAGC	2 cut(s)	207, 210
LweI	GCATC	2 cut(s)	325, 798
MaeI	CTAG	3 cut(s)	180, 654, 1050
MaeII	ACGT	1 cut(s)	990
MaeIII	GTNAC	4 cut(s)	155, 409, 430, 775
MalI	GATC	3 cut(s)	102, 510, 550
MbiI	CCGCTC	1 cut(s)	117
MboI	GATC	3 cut(s)	100, 508, 548
MboII	GAAGA	6 cut(s)	129, 226, 593, 866, 948, 998
MfeI	CAATTG	1 cut(s)	297
MhlI	GDGCHC	2 cut(s)	717, 972
MluCI	AATT	5 cut(s)	297, 803, 825, 856, 1055
MseI	TTAA	3 cut(s)	275, 606, 732
MslI	CAYNNNNRTG	1 cut(s)	627
MspA1I	CMGCKG	1 cut(s)	852
MunI	CAATTG	1 cut(s)	297
MwoI	GCNNNNNNNGC	6 cut(s)	77, 264, 678, 701, 916, 1005
NcoI	CCATGG	1 cut(s)	65
NdeII	GATC	3 cut(s)	100, 508, 548
NlaIII	CATG	7 cut(s)	10, 69, 296, 374, 422, 518, 823
NlaIV	GGNNCC	4 cut(s)	96, 187, 250, 716
NmuCI	GTSAC	2 cut(s)	155, 430
PagI	TCATGA	2 cut(s)	418, 514
PcsI	WCGNNNNNNNCGW	1 cut(s)	168
PfeI	GAWTC	5 cut(s)	10, 269, 387, 871, 1041
PflFI	GACNNNGTC	1 cut(s)	472
PkrI	GCNGC	3 cut(s)	222, 225, 854
PpuMI	RGGWCCY	2 cut(s)	284, 727
Psp5II	RGGWCCY	2 cut(s)	284, 727
PspEI	GGTNACC	1 cut(s)	430
PspN4I	GGNNCC	4 cut(s)	96, 187, 250, 716
PspPI	GGNCC	2 cut(s)	284, 727
PspPPI	RGGWCCY	2 cut(s)	284, 727
PstI	CTGCAG	1 cut(s)	1078
PsyI	GACNNNGTC	1 cut(s)	472
RsaI	GTAC	1 cut(s)	923
RsaNI	GTAC	1 cut(s)	922
RseI	CAYNNNNRTG	1 cut(s)	627
SaqAI	TTAA	3 cut(s)	275, 606, 732
SatI	GCNGC	3 cut(s)	221, 224, 853
Sau3AI	GATC	3 cut(s)	100, 508, 548
Sau96I	GGNCC	2 cut(s)	284, 727
SduI	GDGCHC	2 cut(s)	717, 972
SfaNI	GCATC	2 cut(s)	325, 798
SfcI	CTRYAG	1 cut(s)	1074
SinI	GGWCC	2 cut(s)	284, 727
SmiMI	CAYNNNNRTG	1 cut(s)	627
SmlI	CTYRAG	1 cut(s)	771
SmoI	CTYRAG	1 cut(s)	771
Sse9I	AATT	5 cut(s)	297, 803, 825, 856, 1055
SsiI	CCGC	5 cut(s)	115, 183, 529, 813, 852
SspMI	CTAG	3 cut(s)	180, 654, 1050
StyI	CCWWGG	4 cut(s)	65, 90, 244, 1049
TaaI	ACNGT	2 cut(s)	719, 943
TaiI	ACGT	1 cut(s)	993
TaqI	TCGA	1 cut(s)	1080
TaqII	GACCGA	1 cut(s)	440
TasI	AATT	5 cut(s)	297, 803, 825, 856, 1055
TatI	WGTACW	1 cut(s)	921
TauI	GCSGC	1 cut(s)	855
TfiI	GAWTC	5 cut(s)	10, 269, 387, 871, 1041
Tru1I	TTAA	3 cut(s)	275, 606, 732
Tru9I	TTAA	3 cut(s)	275, 606, 732
TscAI	CASTG	2 cut(s)	948, 1006
TseFI	GTSAC	2 cut(s)	155, 430
TseI	GCWGC	2 cut(s)	220, 223
Tsp45I	GTSAC	2 cut(s)	155, 430
TspDTI	ATGAA	5 cut(s)	23, 531, 611, 762, 836
TspGWI	ACGGA	1 cut(s)	568
TspRI	CASTG	2 cut(s)	948, 1006
Tth111I	GACNNNGTC	1 cut(s)	472
VneI	GTGCAC	1 cut(s)	968
VpaK11BI	GGWCC	2 cut(s)	284, 727
XapI	RAATTY	2 cut(s)	803, 1055
XbaI	TCTAGA	1 cut(s)	653
XmaJI	CCTAGG	1 cut(s)	1049
XspI	CTAG	3 cut(s)	180, 654, 1050
ZraI	GACGTC	1 cut(s)	991

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.