FvH4_7g15810
BZIP Family

Common plant regulatory factor

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
13654874 .. 13660478
5605 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g15810.t2

Sequence Viewer

Length: 1170 bp
ATGTTTATCCTGATTGGGCAGCCATGCAGAGTTCCTATGCCGCCATATTACAACTCACCAGCAGCTTCTGGCCATGCTCCCCATCCATATATGTGGGGACCCCCACAGACTATGATGTCACCCTATGGGGCACCTTATGCAGCAATATACTCTCACGGAAGTGTTTATGCGCATCCAGCAGTTCCTCTTGGTTCAAATGGTCAAGGGGTTCCACTATCACCTGCTGCTGCAAATCCGTCAAGTGTGGAAACACCTACAAAGTCATCTGGTAATAATGATCGAGGGTTGGTGAAAAGGTCAAAAGGATTTGATGCACTTGAAATGTCAATAGGCAATGGTAATGTTGAGAATGCTGAAGGTGAAGCTGATCAGTCTCTCTCCAAGAGTTCTGCAACTGAAGGTTCTAGTAGTGATGGGAATGCTTCTCGGGCAAATCAATCCAGAAGAAAAAGAACTCGTGAGGGAACGCCCACCACTGTTGTGGCAATAGCTGGAGATCAGAAACCTGAAATGCAGGCCAGTCCGGCTTCTGCAAAGGATGTAAACGCAGCTTCTAATAAGGTGTTGGGTACAACTGTTGCTGCTGTTGGTGTCCCAGCAAAATTGGTTAGACCGGCAGTGTCTCCTGGCATGACCACTGTGTTGGAACTCAAGAATCCGTCCAGCTTGAACTTGGCCAGTGCTACTAGTGTTCAACAACCCAGAGCAGTTTTGCCTCCAGAGACCTGGTTACAGAATGAAAGGGAGCTCAAAAGGGAGAGGCGGAAACAATCTAATCGGGAATCTGCTAGAAGATCCAGGTTGAGGAAGCAGGCTGAGACTGATGAACTTGCACGAAAAGTTGAGGCCTTGAATGCTGATAATGAGTCACTTAAATCTGAAATAAATCGATTGGCAGAAAGTTCTGATAGACTGAGGGTTGAAAATGCTTCACTACTGGAGAAACTGAAAAAAGCACGAGTAGGACGAATGGAAGAGATTATCATGAATATTGAAGATAACAGGGTCGAAGCTATTAGTACAGAAAACCTGCTGTCAAGAGTCAATAACTCCGGTGCAATAGCTAGAGATGTTGAGGAAGAGGGTAGCATGTATGAGAAAAAGGCTACGGCAAAGCTGCATCAGCTCCTGGATGCGAGTCCAAGGACTGATGCCATTGCTGCTAGCTAA

Protein Analysis

390

Amino Acids

41.73

Weight (kDa)

9.24

Isoelectric Point (pI)

57.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFMR PF07777 1 - 100 3.6e-33 G-box binding protein MFMR
MFMR_assoc PF16596 131 - 263 8.7e-16 Disordered region downstream of MFMR
bZIP_1 PF00170 285 - 347 3e-18 bZIP transcription factor
bZIP_2 PF07716 287 - 336 5.3e-07 Basic region leucine zipper
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 229
AasI GACNNNNNNGTC 1 cut(s) 115
Acc16I TGCGCA 1 cut(s) 171
Acc36I ACCTGC 2 cut(s) 229, 1038
AccB1I GGYRCC 1 cut(s) 130
AciI CCGC 2 cut(s) 41, 763
AclWI GGATC 1 cut(s) 789
AcoI YGGCCR 2 cut(s) 70, 675
AcuI CTGAAG 2 cut(s) 375, 417
AfaI GTAC 2 cut(s) 571, 1021
AfiI CCNNNNNNNGG 1 cut(s) 804
AgsI TTSAA 7 cut(s) 195, 320, 670, 695, 853, 923, 995
AhlI ACTAGT 1 cut(s) 686
AjnI CCWGG 4 cut(s) 625, 725, 797, 1128
AleI CACNNNNGTG 2 cut(s) 159, 479
Alw21I GWGCWC 1 cut(s) 750
Alw26I GTCTC 4 cut(s) 378, 627, 716, 812
AlwI GGATC 1 cut(s) 789
AlwNI CAGNNNCTG 2 cut(s) 68, 1129
Ama87I CYCGRG 1 cut(s) 426
AoxI GGCC 4 cut(s) 70, 516, 675, 846
ApeKI GCWGC 9 cut(s) 19, 62, 140, 224, 227, 548, 581, 1117, 1160
AspLEI GCGC 1 cut(s) 172
AspS9I GGNCC 1 cut(s) 98
AsuHPI GGTGA 5 cut(s) 48, 111, 210, 301, 371
AsuNHI GCTAGC 1 cut(s) 1163
AvaI CYCGRG 1 cut(s) 426
AvaII GGWCC 1 cut(s) 98
BaeGI GKGCMC 1 cut(s) 133
BaeI ACNNNNGTAYC 2 cut(s) 561, 594
BalI TGGCCA 2 cut(s) 72, 677
BanI GGYRCC 1 cut(s) 130
BanII GRGCYC 1 cut(s) 750
BauI CACGAG 2 cut(s) 456, 957
Bbv12I GWGCWC 1 cut(s) 750
BbvI GCAGC 9 cut(s) 31, 74, 152, 211, 214, 560, 568, 1104, 1147
BccI CCATC 2 cut(s) 90, 407
BceAI ACGGC 1 cut(s) 1125
BciT130I CCWGG 4 cut(s) 627, 727, 799, 1130
BclI TGATCA 1 cut(s) 367
BcoDI GTCTC 4 cut(s) 378, 627, 716, 812
BcuI ACTAGT 1 cut(s) 686
BfaI CTAG 5 cut(s) 405, 687, 789, 1065, 1164
BfuAI ACCTGC 2 cut(s) 229, 1038
BglI GCCNNNNNGGC 1 cut(s) 524
Bme1390I CCNGG 4 cut(s) 627, 727, 799, 1130
Bme18I GGWCC 1 cut(s) 98
BmeT110I CYCGRG 1 cut(s) 426
BmgT120I GGNCC 1 cut(s) 98
BmiI GGNNCC 4 cut(s) 99, 100, 132, 210
BmrFI CCNGG 4 cut(s) 627, 727, 799, 1130
BmsI GCATC 5 cut(s) 181, 301, 1123, 1129, 1141
BmtI GCTAGC 1 cut(s) 1167
BpmI CTGGAG 3 cut(s) 513, 702, 959
BpuEI CTTGAG 1 cut(s) 635
Bsa29I ATCGAT 1 cut(s) 889
BsaI GGTCTC 1 cut(s) 716
BsaJI CCNNGG 1 cut(s) 1142
BsaWI WCCGGW 1 cut(s) 1052
Bsc4I CCNNNNNNNGG 1 cut(s) 804
Bse118I RCCGGY 1 cut(s) 613
Bse1I ACTGG 3 cut(s) 519, 678, 942
Bse3DI GCAATG 2 cut(s) 340, 1155
BseBI CCWGG 4 cut(s) 627, 727, 799, 1130
BseCI ATCGAT 1 cut(s) 889
BseDI CCNNGG 1 cut(s) 1142
BseGI GGATG 4 cut(s) 82, 172, 544, 1138
BseLI CCNNNNNNNGG 1 cut(s) 804
BseMI GCAATG 2 cut(s) 340, 1155
BseMII CTCAG 2 cut(s) 807, 905
BseNI ACTGG 3 cut(s) 519, 678, 942
BseSI GKGCMC 1 cut(s) 133
BseXI GCAGC 9 cut(s) 31, 74, 152, 211, 214, 560, 568, 1104, 1147
BseYI CCCAGC 1 cut(s) 595
BshFI GGCC 4 cut(s) 72, 518, 677, 848
BshNI GGYRCC 1 cut(s) 130
BshVI ATCGAT 1 cut(s) 889
BsiHKAI GWGCWC 1 cut(s) 750
BsiHKCI CYCGRG 1 cut(s) 426
BsiSI CCGG 3 cut(s) 524, 614, 1053
BslFI GGGAC 2 cut(s) 111, 578
BslI CCNNNNNNNGG 1 cut(s) 804
BsmAI GTCTC 4 cut(s) 378, 627, 716, 812
BsmFI GGGAC 2 cut(s) 111, 578
BsmI GAATGC 3 cut(s) 355, 424, 859
BsnI GGCC 4 cut(s) 72, 518, 677, 848
Bso31I GGTCTC 1 cut(s) 716
BsoBI CYCGRG 1 cut(s) 426
Bsp1286I GDGCHC 2 cut(s) 133, 750
Bsp143I GATC 4 cut(s) 277, 367, 496, 794
BspACI CCGC 2 cut(s) 41, 763
BspANI GGCC 4 cut(s) 72, 518, 677, 848
BspCNI CTCAG 2 cut(s) 808, 906
BspDI ATCGAT 1 cut(s) 889
BspHI TCATGA 1 cut(s) 984
BspLI GGNNCC 4 cut(s) 99, 100, 132, 210
BspMI ACCTGC 2 cut(s) 229, 1038
BspOI GCTAGC 1 cut(s) 1167
BspPI GGATC 1 cut(s) 789
BspT107I GGYRCC 1 cut(s) 130
BspTNI GGTCTC 1 cut(s) 716
BsrDI GCAATG 2 cut(s) 340, 1155
BsrFI RCCGGY 1 cut(s) 613
BsrI ACTGG 3 cut(s) 519, 678, 942
BssAI RCCGGY 1 cut(s) 613
BssECI CCNNGG 1 cut(s) 1142
BssMI GATC 4 cut(s) 277, 367, 496, 794
BssSI CACGAG 2 cut(s) 456, 957
BssT1I CCWWGG 1 cut(s) 1142
Bst2BI CACGAG 2 cut(s) 456, 957
Bst2UI CCWGG 4 cut(s) 627, 727, 799, 1130
Bst4CI ACNGT 3 cut(s) 478, 577, 640
Bst6I CTCTTC 2 cut(s) 969, 1074
BstAPI GCANNNNNTGC 1 cut(s) 137
BstC8I GCNNGC 3 cut(s) 516, 813, 1165
BstDEI CTNAG 2 cut(s) 816, 914
BstF5I GGATG 4 cut(s) 82, 172, 544, 1138
BstHHI GCGC 1 cut(s) 172
BstKTI GATC 4 cut(s) 280, 370, 499, 797
BstMAI GTCTC 4 cut(s) 378, 627, 716, 812
BstMBI GATC 4 cut(s) 277, 367, 496, 794
BstMWI GCNNNNNNNGC 7 cut(s) 137, 176, 428, 524, 854, 1123, 1160
BstNI CCWGG 4 cut(s) 627, 727, 799, 1130
BstNSI RCATGY 1 cut(s) 1093
BstSCI CCNGG 4 cut(s) 625, 725, 797, 1128
BstSLI GKGCMC 1 cut(s) 133
BstV1I GCAGC 9 cut(s) 31, 74, 152, 211, 214, 560, 568, 1104, 1147
BstX2I RGATCY 1 cut(s) 794
BstXI CCANNNNNNTGG 4 cut(s) 93, 481, 643, 726
BstYI RGATCY 1 cut(s) 794
Bsu15I ATCGAT 1 cut(s) 889
BsuRI GGCC 4 cut(s) 72, 518, 677, 848
BsuTUI ATCGAT 1 cut(s) 889
BtsCI GGATG 4 cut(s) 82, 172, 544, 1138
BtsI GCAGTG 1 cut(s) 624
BtsIMutI CAGTG 4 cut(s) 474, 624, 636, 685
BveI ACCTGC 2 cut(s) 229, 1038
Cac8I GCNNGC 3 cut(s) 516, 813, 1165
CaiI CAGNNNCTG 2 cut(s) 68, 1129
CciI TCATGA 1 cut(s) 984
CfoI GCGC 1 cut(s) 172
Cfr10I RCCGGY 1 cut(s) 613
Cfr13I GGNCC 1 cut(s) 98
ClaI ATCGAT 1 cut(s) 889
CsiI ACCWGGT 1 cut(s) 725
Csp6I GTAC 2 cut(s) 570, 1020
CspCI CAANNNNNGTGG 2 cut(s) 460, 495
CviAII CATG 5 cut(s) 24, 74, 631, 985, 1090
CviQI GTAC 2 cut(s) 570, 1020
DdeI CTNAG 2 cut(s) 816, 914
DpnI GATC 4 cut(s) 279, 369, 498, 796
DpnII GATC 4 cut(s) 277, 367, 496, 794
DrdI GACNNNNNNGTC 1 cut(s) 115
DseDI GACNNNNNNGTC 1 cut(s) 115
EaeI YGGCCR 2 cut(s) 70, 675
Eam1104I CTCTTC 2 cut(s) 969, 1074
EarI CTCTTC 2 cut(s) 969, 1074
EciI GGCGGA 1 cut(s) 778
Ecl136II GAGCTC 1 cut(s) 748
Eco130I CCWWGG 1 cut(s) 1142
Eco147I AGGCCT 1 cut(s) 848
Eco24I GRGCYC 1 cut(s) 750
Eco31I GGTCTC 1 cut(s) 716
Eco47I GGWCC 1 cut(s) 98
Eco53kI GAGCTC 1 cut(s) 748
Eco57I CTGAAG 2 cut(s) 375, 417
Eco88I CYCGRG 1 cut(s) 426
EcoICRI GAGCTC 1 cut(s) 748
EcoO109I RGGNCCY 1 cut(s) 98
EcoRII CCWGG 4 cut(s) 625, 725, 797, 1128
EcoT14I CCWWGG 1 cut(s) 1142
EcoT38I GRGCYC 1 cut(s) 750
ErhI CCWWGG 1 cut(s) 1142
FaeI CATG 5 cut(s) 27, 77, 634, 988, 1093
FaqI GGGAC 2 cut(s) 111, 578
FatI CATG 5 cut(s) 23, 73, 630, 984, 1089
FbaI TGATCA 1 cut(s) 367
FokI GGATG 4 cut(s) 69, 159, 551, 1145
FriOI GRGCYC 1 cut(s) 750
FspAI RTGCGCAY 1 cut(s) 171
FspBI CTAG 5 cut(s) 405, 687, 789, 1065, 1164
FspI TGCGCA 1 cut(s) 171
GlaI GCGC 1 cut(s) 171
GsaI CCCAGC 1 cut(s) 599
GsuI CTGGAG 3 cut(s) 513, 702, 959
HaeIII GGCC 4 cut(s) 72, 518, 677, 848
HapII CCGG 3 cut(s) 524, 614, 1053
HhaI GCGC 1 cut(s) 172
Hin1II CATG 5 cut(s) 27, 77, 634, 988, 1093
Hin6I GCGC 1 cut(s) 170
HinP1I GCGC 1 cut(s) 170
HinfI GANTC 5 cut(s) 655, 782, 866, 1041, 1138
HpaII CCGG 3 cut(s) 524, 614, 1053
HphI GGTGA 5 cut(s) 48, 111, 210, 301, 371
Hpy166II GTNNAC 1 cut(s) 544
Hpy188I TCNGA 3 cut(s) 501, 880, 907
Hpy188III TCNNGA 8 cut(s) 10, 441, 458, 652, 719, 779, 985, 1038
Hpy8I GTNNAC 1 cut(s) 544
HpyAV CCTTC 2 cut(s) 350, 392
HpyCH4III ACNGT 3 cut(s) 478, 577, 640
HpyF10VI GCNNNNNNNGC 7 cut(s) 137, 176, 428, 524, 854, 1123, 1160
HpyF3I CTNAG 2 cut(s) 816, 914
Hsp92II CATG 5 cut(s) 27, 77, 634, 988, 1093
HspAI GCGC 1 cut(s) 170
KflI GGGWCCC 1 cut(s) 98
Ksp22I TGATCA 1 cut(s) 367
Kzo9I GATC 4 cut(s) 277, 367, 496, 794
LmnI GCTCC 3 cut(s) 82, 745, 1131
Lsp1109I GCAGC 9 cut(s) 31, 74, 152, 211, 214, 560, 568, 1104, 1147
LweI GCATC 5 cut(s) 181, 301, 1123, 1129, 1141
MabI ACCWGGT 1 cut(s) 725
MaeI CTAG 5 cut(s) 405, 687, 789, 1065, 1164
MaeIII GTNAC 3 cut(s) 117, 729, 867
MalI GATC 4 cut(s) 279, 369, 498, 796
MboI GATC 4 cut(s) 277, 367, 496, 794
MboII GAAGA 5 cut(s) 456, 804, 986, 1007, 1091
MflI RGATCY 1 cut(s) 794
MhlI GDGCHC 2 cut(s) 133, 750
MlsI TGGCCA 2 cut(s) 72, 677
MluCI AATT 1 cut(s) 602
MluNI TGGCCA 2 cut(s) 72, 677
MlyI GAGTC 3 cut(s) 875, 1050, 1147
MmeI TCCRAC 1 cut(s) 624
Mox20I TGGCCA 2 cut(s) 72, 677
MscI TGGCCA 2 cut(s) 72, 677
MseI TTAA 1 cut(s) 873
MslI CAYNNNNRTG 3 cut(s) 91, 159, 479
Msp20I TGGCCA 2 cut(s) 72, 677
MspI CCGG 3 cut(s) 524, 614, 1053
MspR9I CCNGG 4 cut(s) 627, 727, 799, 1130
Mva1269I GAATGC 3 cut(s) 355, 424, 859
MvaI CCWGG 4 cut(s) 627, 727, 799, 1130
MwoI GCNNNNNNNGC 7 cut(s) 137, 176, 428, 524, 854, 1123, 1160
NdeII GATC 4 cut(s) 277, 367, 496, 794
NheI GCTAGC 1 cut(s) 1163
NlaIII CATG 5 cut(s) 27, 77, 634, 988, 1093
NlaIV GGNNCC 4 cut(s) 99, 100, 132, 210
NmuCI GTSAC 2 cut(s) 117, 867
NsbI TGCGCA 1 cut(s) 171
NspI RCATGY 1 cut(s) 1093
OliI CACNNNNGTG 2 cut(s) 159, 479
PagI TCATGA 1 cut(s) 984
PaqCI CACCTGC 1 cut(s) 229
PceI AGGCCT 1 cut(s) 848
PcsI WCGNNNNNNNCGW 1 cut(s) 964
PctI GAATGC 3 cut(s) 355, 424, 859
PfeI GAWTC 2 cut(s) 655, 782
PfoI TCCNGGA 1 cut(s) 1128
PleI GAGTC 3 cut(s) 874, 1049, 1146
PpsI GAGTC 3 cut(s) 874, 1049, 1146
PpuMI RGGWCCY 1 cut(s) 98
Psp124BI GAGCTC 1 cut(s) 750
Psp5II RGGWCCY 1 cut(s) 98
Psp6I CCWGG 4 cut(s) 625, 725, 797, 1128
PspFI CCCAGC 1 cut(s) 595
PspGI CCWGG 4 cut(s) 625, 725, 797, 1128
PspN4I GGNNCC 4 cut(s) 99, 100, 132, 210
PspPI GGNCC 1 cut(s) 98
PspPPI RGGWCCY 1 cut(s) 98
PstNI CAGNNNCTG 2 cut(s) 68, 1129
PsuI RGATCY 1 cut(s) 794
RsaI GTAC 2 cut(s) 571, 1021
RsaNI GTAC 2 cut(s) 570, 1020
RseI CAYNNNNRTG 3 cut(s) 91, 159, 479
SacI GAGCTC 1 cut(s) 750
SaqAI TTAA 1 cut(s) 873
Sau3AI GATC 4 cut(s) 277, 367, 496, 794
Sau96I GGNCC 1 cut(s) 98
SchI GAGTC 3 cut(s) 875, 1050, 1147
ScrFI CCNGG 4 cut(s) 627, 727, 799, 1130
SduI GDGCHC 2 cut(s) 133, 750
SexAI ACCWGGT 1 cut(s) 725
SfaNI GCATC 5 cut(s) 181, 301, 1123, 1129, 1141
SinI GGWCC 1 cut(s) 98
SmiMI CAYNNNNRTG 3 cut(s) 91, 159, 479
SmlI CTYRAG 1 cut(s) 650
SmoI CTYRAG 1 cut(s) 650
SpeI ACTAGT 1 cut(s) 686
Sse9I AATT 1 cut(s) 602
SseBI AGGCCT 1 cut(s) 848
SsiI CCGC 2 cut(s) 41, 763
SspI AATATT 1 cut(s) 991
SspMI CTAG 5 cut(s) 405, 687, 789, 1065, 1164
SstI GAGCTC 1 cut(s) 750
StuI AGGCCT 1 cut(s) 848
StyD4I CCNGG 4 cut(s) 625, 725, 797, 1128
StyI CCWWGG 1 cut(s) 1142
TaaI ACNGT 3 cut(s) 478, 577, 640
TaqI TCGA 3 cut(s) 280, 889, 1008
TasI AATT 1 cut(s) 602
TatI WGTACW 1 cut(s) 1019
TauI GCSGC 1 cut(s) 43
TfiI GAWTC 2 cut(s) 655, 782
Tru1I TTAA 1 cut(s) 873
Tru9I TTAA 1 cut(s) 873
TscAI CASTG 4 cut(s) 481, 624, 643, 685
TseFI GTSAC 2 cut(s) 117, 867
TseI GCWGC 9 cut(s) 19, 62, 140, 224, 227, 548, 581, 1117, 1160
Tsp45I GTSAC 2 cut(s) 117, 867
TspDTI ATGAA 3 cut(s) 753, 840, 1001
TspGWI ACGGA 3 cut(s) 171, 225, 648
TspRI CASTG 4 cut(s) 481, 624, 643, 685
VpaK11BI GGWCC 1 cut(s) 98
XceI RCATGY 1 cut(s) 1093
XcmI CCANNNNNNNNNTGG 2 cut(s) 478, 670
XspI CTAG 5 cut(s) 405, 687, 789, 1065, 1164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.