Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0004117

Physical Location & Seq

Genomic Coordinates Forward (+)

11190355 .. 11193416

Gene Structure 3062 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g10380.10

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1269 bp

ATGGGAAACGATGATGATGCAAAGTCTGTTAAATCTGAAAAATCATATTCGCCTCTGCCGGCAGATCAGGCGAATCCTAGCAATCAGACCAATATGCATGTCTATCCTGATTGGGCAGCCATGCAGGCTTATTATGGTCCGAGAGTTGCTCTCCCTCCATATTACAACTCAGCTATGGCTTCTGGCCACCCTCCTCATCCCTATATGTGGCCCCCACCACAGCATATGATGCCACCCTATGGGGCGCCTTATGCAGTATACTCGCATGGAGGTGTTTACGCACATCCGGCAGTTCCTCTTGCATCCCATGGTCAAGGGGGTCCATCCTCACCTGCTGCTGCGACTCCTTTGAATATGGAAACACCAACAAAGTCATCTGGTAATACAGACCGTGGGTTAATGAAAAAGTTGAAAGGATTTGATGGGCTTGCAATGTCAATAGGAAGTGGTAATGTTATGAATGCCGAAGGTGGAGCTGAGCGTAGTCTCTCCCAGAGTTCTGGGACTGAAGGTTCTAGCAATGGAAGTGATGGGAATACTGCTGCAGCAAATCAAACCAGAAGAAAAAGAAGTCGTGAGGGAACACCAGCCACTGCTGGAGAAGGGAAGACTGACATGCAGCCTGGACCAGCTGAGGAGGCAAGTGCAGCTACTGATAAAGTGTTGGGTGTAACTCTTGCTGTTAGTACCCCGGGAAAATTGGTTGGACCAGCTGTTTCTCCTGGCATGACCACAGCGTTGGAACTCAAGAACTTGCCTATCTTGAACTCGAAGACAAGTCCTACCACTGTTCCGCAATCCTGTGCAGTTTTGCCTCCGGAAACCTGGATACATAATGACCGGGAGATAAAACGGGAAAGGAGGAAACAATCTAATCGGGAATCTGCTAGAAGATCCAGGTTGAGGAAGCAGGCTGAGACTGAAGAACTTGCACGAAAGGTCGAGGCCTTATCTGCAGACAATGTGGCACTTAAATCTGAAATAAACCGGGTAACAGAGAATTCTGCTACACTGAGGCTAGAAAACACTACATTACTGGATAAACTCAAAAACGCACGCGTAGGAAGAATGGAAGACATCATCATGAACATTGATGATAAGAGGGTCCAACCTTTCAGTACCGAGAACCTACTGTCAAGAGTTAATAACGCAGGTTCTATTGCTAGGGATGCTGAGAAAGACGGTGACGCTTACGAGAAAAACAATGGGACGAAGCTGCACCAACTCCTGGATGCGAGTCCAAGGGCCGATGCAGTCGCTGCTGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006082 GO:0006355 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009719 GO:0009725 GO:0009737 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0016143 GO:0019219 GO:0019222 GO:0019748 GO:0019757 GO:0019760 GO:0031323 GO:0031326 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043565 GO:0044212 GO:0044237 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1901135 GO:1901363 GO:1901564 GO:1901657 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MFMR MFMR_assoc bZIP_1

Protein Analysis

423

Amino Acids

45.02

Weight (kDa)

8.69

Isoelectric Point (pI)

49.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004117)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46270 AT2G46270 AT2G46270 AT2G46270
fragaria_vesca	FvH4_7g15810 FvH4_7g15810 FvH4_7g15810 FvH4_7g15810
malus_domestica	MD01G1074700.v1.1 MD07G1143800.v1.1
prunus_persica	Prupe.2G182800_v2.0.a1 Prupe.2G182800_v2.0.a1 Prupe.2G182800_v2.0.a1 Prupe.2G182800_v2.0.a1 Prupe.2G182800_v2.0.a1 Prupe.2G182800_v2.0.a1 Prupe.2G182800_v2.0.a1 Prupe.2G182800_v2.0.a1
pyrus_communis	pycom01g10380 pycom07g14230
rosa_chinensis	RchiOBHm_Chr1g0358601
rosa_laevigata	RLG00000027942
rosa_multiflora	Rmu_sc0001609.1_g000020
rosa_roxburghii	Rroxscaffold_4G00297760
rosa_rugosa	Rorug01G0262800 Rorug01G0262800 Rorug01G0262800 Rorug01G0262900
rosa_samantha	Rh1AG278000 Rh1BG244500 Rh1CG261400 Rh1DG272800
rosa_wichuraiana	Rw1G024670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	340
Acc36I	ACCTGC	2 cut(s)	340, 1142
AccB1I	GGYRCC	1 cut(s)	244
AccB7I	CCANNNNNTGG	2 cut(s)	239, 1228
AccI	GTMKAC	1 cut(s)	258
AccII	CGCG	1 cut(s)	1059
AccIII	TCCGGA	1 cut(s)	817
AciI	CCGC	1 cut(s)	794
AclWI	GGATC	1 cut(s)	888
AcoI	YGGCCR	1 cut(s)	184
AcsI	RAATTY	1 cut(s)	1000
AcuI	CTGAAG	2 cut(s)	528, 942
AcyI	GRCGYC	1 cut(s)	245
AfaI	GTAC	2 cut(s)	688, 1120
AfiI	CCNNNNNNNGG	4 cut(s)	207, 239, 903, 1228
AflIII	ACRYGT	1 cut(s)	1057
AgsI	TTSAA	3 cut(s)	352, 412, 766
AjnI	CCWGG	5 cut(s)	622, 721, 824, 896, 1227
AloI	GAACNNNNNNTCC	2 cut(s)	496, 528
AluBI	AGCT	6 cut(s)	173, 476, 632, 650, 713, 1216
AluI	AGCT	6 cut(s)	173, 476, 632, 650, 713, 1216
Alw26I	GTCTC	2 cut(s)	491, 911
AlwI	GGATC	1 cut(s)	888
AlwNI	CAGNNNCTG	3 cut(s)	593, 653, 1259
Ama87I	CYCGRG	1 cut(s)	691
Aor13HI	TCCGGA	1 cut(s)	817
AoxI	GGCC	4 cut(s)	184, 209, 945, 1245
ApeKI	GCWGC	9 cut(s)	116, 335, 338, 542, 545, 619, 647, 1216, 1259
ApoI	RAATTY	1 cut(s)	1000
AspLEI	GCGC	1 cut(s)	247
AspS9I	GGNCC	7 cut(s)	137, 210, 320, 626, 707, 1105, 1245
AsuC2I	CCSGG	4 cut(s)	692, 693, 842, 989
AsuHPI	GGTGA	2 cut(s)	321, 1196
AvaI	CYCGRG	1 cut(s)	691
AvaII	GGWCC	5 cut(s)	137, 320, 626, 707, 1105
BalI	TGGCCA	1 cut(s)	186
BanI	GGYRCC	1 cut(s)	244
BbsI	GAAGAC	3 cut(s)	614, 779, 1080
BbvCI	CCTCAGC	1 cut(s)	633
BbvI	GCAGC	9 cut(s)	128, 322, 325, 529, 557, 631, 659, 1203, 1246
BccI	CCATC	3 cut(s)	331, 416, 524
BcgI	CGANNNNNNTGC	3 cut(s)	33, 243, 277
BciT130I	CCWGG	5 cut(s)	624, 723, 826, 898, 1229
BciVI	GTATCC	1 cut(s)	822
BcnI	CCSGG	4 cut(s)	692, 693, 842, 989
BcoDI	GTCTC	2 cut(s)	491, 911
BfaI	CTAG	5 cut(s)	78, 516, 888, 1019, 1164
BfmI	CTRYAG	2 cut(s)	543, 954
BfoI	RGCGCY	1 cut(s)	248
BfuAI	ACCTGC	2 cut(s)	340, 1142
BfuI	GTATCC	1 cut(s)	822
BglI	GCCNNNNNGGC	1 cut(s)	125
BisI	GCNGC	9 cut(s)	117, 336, 339, 543, 546, 620, 648, 1217, 1260
BlpI	GCTNAGC	1 cut(s)	477
BlsI	GCNGC	9 cut(s)	118, 337, 340, 544, 547, 621, 649, 1218, 1261
Bme1390I	CCNGG	9 cut(s)	624, 692, 693, 723, 826, 842, 898, 989, 1229
Bme18I	GGWCC	5 cut(s)	137, 320, 626, 707, 1105
BmeT110I	CYCGRG	1 cut(s)	691
BmgT120I	GGNCC	7 cut(s)	137, 210, 320, 626, 707, 1105, 1245
BmiI	GGNNCC	4 cut(s)	212, 246, 321, 1106
BmrFI	CCNGG	9 cut(s)	624, 692, 693, 723, 826, 842, 898, 989, 1229
BmsI	GCATC	6 cut(s)	7, 219, 311, 1159, 1222, 1240
BpiI	GAAGAC	3 cut(s)	614, 779, 1080
BplI	GAGNNNNNCTC	4 cut(s)	133, 165, 135, 167
BpmI	CTGGAG	1 cut(s)	618
Bpu10I	CCTNAGC	1 cut(s)	633
Bpu1102I	GCTNAGC	1 cut(s)	477
BpuEI	CTTGAG	1 cut(s)	731
BpuMI	CCSGG	4 cut(s)	692, 693, 842, 989
BsaHI	GRCGYC	1 cut(s)	245
BsaJI	CCNNGG	5 cut(s)	307, 391, 690, 691, 1241
BsaWI	WCCGGW	1 cut(s)	817
Bsc4I	CCNNNNNNNGG	4 cut(s)	207, 239, 903, 1228
Bse118I	RCCGGY	1 cut(s)	58
Bse1I	ACTGG	1 cut(s)	1041
Bse3DI	GCAATG	2 cut(s)	438, 526
BseAI	TCCGGA	1 cut(s)	817
BseBI	CCWGG	5 cut(s)	624, 723, 826, 898, 1229
BseDI	CCNNGG	5 cut(s)	307, 391, 690, 691, 1241
BseGI	GGATG	6 cut(s)	196, 283, 302, 323, 1174, 1237
BseLI	CCNNNNNNNGG	4 cut(s)	207, 239, 903, 1228
BseMI	GCAATG	2 cut(s)	438, 526
BseMII	CTCAG	6 cut(s)	183, 468, 624, 906, 1004, 1164
BseNI	ACTGG	1 cut(s)	1041
BseRI	GAGGAG	2 cut(s)	183, 650
BseXI	GCAGC	9 cut(s)	128, 322, 325, 529, 557, 631, 659, 1203, 1246
BsgI	GTGCAG	3 cut(s)	666, 825, 1202
Bsh1236I	CGCG	1 cut(s)	1059
BshFI	GGCC	4 cut(s)	186, 211, 947, 1247
BshNI	GGYRCC	1 cut(s)	244
BsiHKCI	CYCGRG	1 cut(s)	691
BsiSI	CCGG	6 cut(s)	59, 287, 692, 818, 841, 988
BslFI	GGGAC	2 cut(s)	517, 1222
BslI	CCNNNNNNNGG	4 cut(s)	207, 239, 903, 1228
BsmAI	GTCTC	2 cut(s)	491, 911
BsmFI	GGGAC	2 cut(s)	517, 1222
BsmI	GAATGC	1 cut(s)	466
BsnI	GGCC	4 cut(s)	186, 211, 947, 1247
BsoBI	CYCGRG	1 cut(s)	691
Bsp13I	TCCGGA	1 cut(s)	817
Bsp143I	GATC	2 cut(s)	64, 893
Bsp1720I	GCTNAGC	1 cut(s)	477
Bsp19I	CCATGG	1 cut(s)	307
BspACI	CCGC	1 cut(s)	794
BspANI	GGCC	4 cut(s)	186, 211, 947, 1247
BspCNI	CTCAG	6 cut(s)	182, 469, 625, 907, 1005, 1165
BspEI	TCCGGA	1 cut(s)	817
BspFNI	CGCG	1 cut(s)	1059
BspHI	TCATGA	1 cut(s)	1083
BspLI	GGNNCC	4 cut(s)	212, 246, 321, 1106
BspMAI	CTGCAG	2 cut(s)	547, 958
BspMI	ACCTGC	2 cut(s)	340, 1142
BspPI	GGATC	1 cut(s)	888
BspT107I	GGYRCC	1 cut(s)	244
BsrDI	GCAATG	2 cut(s)	438, 526
BsrFI	RCCGGY	1 cut(s)	58
BsrI	ACTGG	1 cut(s)	1041
BssAI	RCCGGY	1 cut(s)	58
BssECI	CCNNGG	5 cut(s)	307, 391, 690, 691, 1241
BssMI	GATC	2 cut(s)	64, 893
BssNAI	GTATAC	1 cut(s)	259
BssNI	GRCGYC	1 cut(s)	245
BssT1I	CCWWGG	2 cut(s)	307, 1241
Bst1107I	GTATAC	1 cut(s)	259
Bst2UI	CCWGG	5 cut(s)	624, 723, 826, 898, 1229
Bst4CI	ACNGT	4 cut(s)	392, 790, 1134, 1184
BstACI	GRCGYC	1 cut(s)	245
BstAPI	GCANNNNNTGC	2 cut(s)	229, 1259
BstC8I	GCNNGC	6 cut(s)	60, 126, 429, 912, 1057, 1264
BstDEI	CTNAG	6 cut(s)	169, 477, 633, 915, 1013, 1173
BstDSI	CCRYGG	2 cut(s)	307, 391
BstF5I	GGATG	6 cut(s)	196, 283, 302, 323, 1174, 1237
BstFNI	CGCG	1 cut(s)	1059
BstH2I	RGCGCY	1 cut(s)	248
BstHHI	GCGC	1 cut(s)	247
BstKTI	GATC	2 cut(s)	67, 896
BstMAI	GTCTC	2 cut(s)	491, 911
BstMBI	GATC	2 cut(s)	64, 893
BstNI	CCWGG	5 cut(s)	624, 723, 826, 898, 1229
BstNSI	RCATGY	2 cut(s)	101, 619
BstSCI	CCNGG	9 cut(s)	622, 690, 691, 721, 824, 840, 896, 987, 1227
BstSFI	CTRYAG	2 cut(s)	543, 954
BstUI	CGCG	1 cut(s)	1059
BstV1I	GCAGC	9 cut(s)	128, 322, 325, 529, 557, 631, 659, 1203, 1246
BstV2I	GAAGAC	3 cut(s)	614, 779, 1080
BstX2I	RGATCY	1 cut(s)	893
BstXI	CCANNNNNNTGG	2 cut(s)	500, 739
BstYI	RGATCY	1 cut(s)	893
BstZ17I	GTATAC	1 cut(s)	259
BsuI	GTATCC	1 cut(s)	822
BsuRI	GGCC	4 cut(s)	186, 211, 947, 1247
BtgI	CCRYGG	2 cut(s)	307, 391
BtsCI	GGATG	6 cut(s)	196, 283, 302, 323, 1174, 1237
BtsI	GCAGTG	1 cut(s)	591
BtsIMutI	CAGTG	3 cut(s)	591, 786, 1010
BveI	ACCTGC	2 cut(s)	340, 1142
Cac8I	GCNNGC	6 cut(s)	60, 126, 429, 912, 1057, 1264
CaiI	CAGNNNCTG	3 cut(s)	593, 653, 1259
CciI	TCATGA	1 cut(s)	1083
CfoI	GCGC	1 cut(s)	247
Cfr10I	RCCGGY	1 cut(s)	58
Cfr13I	GGNCC	7 cut(s)	137, 210, 320, 626, 707, 1105, 1245
Cfr9I	CCCGGG	1 cut(s)	691
CseI	GACGC	1 cut(s)	1196
Csp6I	GTAC	2 cut(s)	687, 1119
CviAII	CATG	7 cut(s)	98, 121, 266, 308, 616, 727, 1084
CviQI	GTAC	2 cut(s)	687, 1119
DdeI	CTNAG	6 cut(s)	169, 477, 633, 915, 1013, 1173
DinI	GGCGCC	1 cut(s)	246
DpnI	GATC	2 cut(s)	66, 895
DpnII	GATC	2 cut(s)	64, 893
EaeI	YGGCCR	1 cut(s)	184
Eco130I	CCWWGG	2 cut(s)	307, 1241
Eco147I	AGGCCT	1 cut(s)	947
Eco47I	GGWCC	5 cut(s)	137, 320, 626, 707, 1105
Eco57I	CTGAAG	2 cut(s)	528, 942
Eco88I	CYCGRG	1 cut(s)	691
EcoRI	GAATTC	1 cut(s)	1000
EcoRII	CCWGG	5 cut(s)	622, 721, 824, 896, 1227
EcoT14I	CCWWGG	2 cut(s)	307, 1241
EcoT22I	ATGCAT	1 cut(s)	99
EgeI	GGCGCC	1 cut(s)	246
EheI	GGCGCC	1 cut(s)	246
ErhI	CCWWGG	2 cut(s)	307, 1241
FaeI	CATG	7 cut(s)	101, 124, 269, 311, 619, 730, 1087
FaqI	GGGAC	2 cut(s)	517, 1222
FatI	CATG	7 cut(s)	97, 120, 265, 307, 615, 726, 1083
FauNDI	CATATG	1 cut(s)	225
FblI	GTMKAC	1 cut(s)	258
Fnu4HI	GCNGC	9 cut(s)	117, 336, 339, 543, 546, 620, 648, 1217, 1260
FokI	GGATG	6 cut(s)	183, 270, 289, 310, 1181, 1244
Fsp4HI	GCNGC	9 cut(s)	117, 336, 339, 543, 546, 620, 648, 1217, 1260
FspBI	CTAG	5 cut(s)	78, 516, 888, 1019, 1164
GlaI	GCGC	1 cut(s)	246
GluI	GCNGC	9 cut(s)	117, 336, 339, 543, 546, 620, 648, 1217, 1260
GsuI	CTGGAG	1 cut(s)	618
HaeII	RGCGCY	1 cut(s)	248
HaeIII	GGCC	4 cut(s)	186, 211, 947, 1247
HapII	CCGG	6 cut(s)	59, 287, 692, 818, 841, 988
HgaI	GACGC	1 cut(s)	1196
HhaI	GCGC	1 cut(s)	247
Hin1I	GRCGYC	1 cut(s)	245
Hin1II	CATG	7 cut(s)	101, 124, 269, 311, 619, 730, 1087
Hin6I	GCGC	1 cut(s)	245
HinP1I	GCGC	1 cut(s)	245
HinfI	GANTC	4 cut(s)	73, 343, 881, 1237
HpaII	CCGG	6 cut(s)	59, 287, 692, 818, 841, 988
HphI	GGTGA	2 cut(s)	321, 1196
Hpy166II	GTNNAC	2 cut(s)	259, 277
Hpy188I	TCNGA	4 cut(s)	37, 87, 141, 979
Hpy188III	TCNNGA	8 cut(s)	107, 575, 748, 763, 818, 878, 1084, 1137
Hpy8I	GTNNAC	2 cut(s)	259, 277
HpyAV	CCTTC	3 cut(s)	461, 503, 596
HpyCH4III	ACNGT	4 cut(s)	392, 790, 1134, 1184
HpyF3I	CTNAG	6 cut(s)	169, 477, 633, 915, 1013, 1173
Hsp92I	GRCGYC	1 cut(s)	245
Hsp92II	CATG	7 cut(s)	101, 124, 269, 311, 619, 730, 1087
HspAI	GCGC	1 cut(s)	245
KasI	GGCGCC	1 cut(s)	244
Kpn2I	TCCGGA	1 cut(s)	817
KroI	GCCGGC	1 cut(s)	58
KroNI	GCCGGC	1 cut(s)	60
Kzo9I	GATC	2 cut(s)	64, 893
LmnI	GCTCC	1 cut(s)	473
Lsp1109I	GCAGC	9 cut(s)	128, 322, 325, 529, 557, 631, 659, 1203, 1246
LweI	GCATC	6 cut(s)	7, 219, 311, 1159, 1222, 1240
MaeI	CTAG	5 cut(s)	78, 516, 888, 1019, 1164
MaeIII	GTNAC	3 cut(s)	670, 991, 1184
MalI	GATC	2 cut(s)	66, 895
MboI	GATC	2 cut(s)	64, 893
MboII	GAAGA	7 cut(s)	573, 619, 784, 903, 935, 1077, 1085
MflI	RGATCY	1 cut(s)	893
MlsI	TGGCCA	1 cut(s)	186
MluCI	AATT	2 cut(s)	698, 1000
MluI	ACGCGT	1 cut(s)	1057
MluNI	TGGCCA	1 cut(s)	186
Mly113I	GGCGCC	1 cut(s)	245
MlyI	GAGTC	2 cut(s)	337, 1246
MmeI	TCCRAC	3 cut(s)	685, 720, 1132
Mox20I	TGGCCA	1 cut(s)	186
Mph1103I	ATGCAT	1 cut(s)	99
MroI	TCCGGA	1 cut(s)	817
MroNI	GCCGGC	1 cut(s)	58
MscI	TGGCCA	1 cut(s)	186
MseI	TTAA	4 cut(s)	30, 398, 972, 1143
MslI	CAYNNNNRTG	2 cut(s)	270, 1082
Msp20I	TGGCCA	1 cut(s)	186
MspA1I	CMGCKG	2 cut(s)	632, 713
MspI	CCGG	6 cut(s)	59, 287, 692, 818, 841, 988
MspR9I	CCNGG	9 cut(s)	624, 692, 693, 723, 826, 842, 898, 989, 1229
Mva1269I	GAATGC	1 cut(s)	466
MvaI	CCWGG	5 cut(s)	624, 723, 826, 898, 1229
MvnI	CGCG	1 cut(s)	1059
NaeI	GCCGGC	1 cut(s)	60
NarI	GGCGCC	1 cut(s)	245
NciI	CCSGG	4 cut(s)	692, 693, 842, 989
NcoI	CCATGG	1 cut(s)	307
NdeI	CATATG	1 cut(s)	225
NdeII	GATC	2 cut(s)	64, 893
NgoMIV	GCCGGC	1 cut(s)	58
NlaIII	CATG	7 cut(s)	101, 124, 269, 311, 619, 730, 1087
NlaIV	GGNNCC	4 cut(s)	212, 246, 321, 1106
NmuCI	GTSAC	1 cut(s)	1184
NsiI	ATGCAT	1 cut(s)	99
NspI	RCATGY	2 cut(s)	101, 619
PagI	TCATGA	1 cut(s)	1083
PaqCI	CACCTGC	1 cut(s)	340
PceI	AGGCCT	1 cut(s)	947
PctI	GAATGC	1 cut(s)	466
PdiI	GCCGGC	1 cut(s)	60
PfeI	GAWTC	2 cut(s)	73, 881
PflMI	CCANNNNNTGG	2 cut(s)	239, 1228
PfoI	TCCNGGA	1 cut(s)	1227
PkrI	GCNGC	9 cut(s)	118, 337, 340, 544, 547, 621, 649, 1218, 1261
PleI	GAGTC	2 cut(s)	337, 1245
PluTI	GGCGCC	1 cut(s)	248
PpsI	GAGTC	2 cut(s)	337, 1245
Psp6I	CCWGG	5 cut(s)	622, 721, 824, 896, 1227
PspGI	CCWGG	5 cut(s)	622, 721, 824, 896, 1227
PspN4I	GGNNCC	4 cut(s)	212, 246, 321, 1106
PspPI	GGNCC	7 cut(s)	137, 210, 320, 626, 707, 1105, 1245
PstI	CTGCAG	2 cut(s)	547, 958
PstNI	CAGNNNCTG	3 cut(s)	593, 653, 1259
PsuI	RGATCY	1 cut(s)	893
PvuII	CAGCTG	2 cut(s)	632, 713
RsaI	GTAC	2 cut(s)	688, 1120
RsaNI	GTAC	2 cut(s)	687, 1119
RseI	CAYNNNNRTG	2 cut(s)	270, 1082
SaqAI	TTAA	4 cut(s)	30, 398, 972, 1143
SatI	GCNGC	9 cut(s)	117, 336, 339, 543, 546, 620, 648, 1217, 1260
Sau3AI	GATC	2 cut(s)	64, 893
Sau96I	GGNCC	7 cut(s)	137, 210, 320, 626, 707, 1105, 1245
SchI	GAGTC	2 cut(s)	337, 1246
ScrFI	CCNGG	9 cut(s)	624, 692, 693, 723, 826, 842, 898, 989, 1229
SfaNI	GCATC	6 cut(s)	7, 219, 311, 1159, 1222, 1240
SfcI	CTRYAG	2 cut(s)	543, 954
SfoI	GGCGCC	1 cut(s)	246
SinI	GGWCC	5 cut(s)	137, 320, 626, 707, 1105
SmaI	CCCGGG	1 cut(s)	693
SmiMI	CAYNNNNRTG	2 cut(s)	270, 1082
SmlI	CTYRAG	1 cut(s)	746
SmoI	CTYRAG	1 cut(s)	746
Sse9I	AATT	2 cut(s)	698, 1000
SseBI	AGGCCT	1 cut(s)	947
SsiI	CCGC	1 cut(s)	794
SspDI	GGCGCC	1 cut(s)	244
SspMI	CTAG	5 cut(s)	78, 516, 888, 1019, 1164
StuI	AGGCCT	1 cut(s)	947
StyD4I	CCNGG	9 cut(s)	622, 690, 691, 721, 824, 840, 896, 987, 1227
StyI	CCWWGG	2 cut(s)	307, 1241
TaaI	ACNGT	4 cut(s)	392, 790, 1134, 1184
TaqI	TCGA	2 cut(s)	770, 942
TasI	AATT	2 cut(s)	698, 1000
TfiI	GAWTC	2 cut(s)	73, 881
Tru1I	TTAA	4 cut(s)	30, 398, 972, 1143
Tru9I	TTAA	4 cut(s)	30, 398, 972, 1143
TscAI	CASTG	3 cut(s)	598, 793, 1017
TseFI	GTSAC	1 cut(s)	1184
TseI	GCWGC	9 cut(s)	116, 335, 338, 542, 545, 619, 647, 1216, 1259
Tsp45I	GTSAC	1 cut(s)	1184
TspDTI	ATGAA	3 cut(s)	416, 473, 1100
TspMI	CCCGGG	1 cut(s)	691
TspRI	CASTG	3 cut(s)	598, 793, 1017
Van91I	CCANNNNNTGG	2 cut(s)	239, 1228
VpaK11BI	GGWCC	5 cut(s)	137, 320, 626, 707, 1105
XapI	RAATTY	1 cut(s)	1000
XceI	RCATGY	2 cut(s)	101, 619
XmaI	CCCGGG	1 cut(s)	691
XmiI	GTMKAC	1 cut(s)	258
XspI	CTAG	5 cut(s)	78, 516, 888, 1019, 1164
Zsp2I	ATGCAT	1 cut(s)	99

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.