FvH4_7g16670

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
14246507 .. 14247815
1309 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g16670.t1

Sequence Viewer

Length: 900 bp
ATGGTCCTCGACACCGGCTCCGACGTCGTCTGGCTCCAATGCGCCCCTTGTAAACGCTGCTACTCCCAAACCGACCTGGTTTTCGACCCGAGAAAATCCTCCTCCTACTCCTCCCTCCCTTGCTCCTCCCCTCTCTGCCGCCGCCTCGACTCCCCCGGCTGCAGCTCAAAGTCCAAAACCTGCCTCTACCAAGTCTCCTACGGCGACGGCTCCTTCACCTTCGGCGACTTCTCCACCGAAACCCTCACCTTCCGCCGCTCCAAAGTCCCCAAAGTCGCCCTCGGCTGCGGCCACGACAACGAAGGCCTCTTCGTCGGCGCCGCCGGCCTCCTCGGCCTCGGCCGCGGCAAGCTCTCCTTTCCTACCCAGACCGGCTCACGCTTCAACTCCAAATTCTCCTACTGCCTCGTCGACCGCTCCGCCTCCTCCAAACCCTCCTCCGTCGTCTTCGGCGACTCCGCCGTCTCCCGCACCGCCCGCTTCACTCCTCTCGTCCCAAACCCTAAGCTCGACACTTTCTACTACATCGAGCTCCTCGGTATCAGCGTCGGCGGGACACGTGTCCGGGGAATCACGGCCTCGCTGTTTAAACTCGACCCTTCCGGAAACGGCGGCGTCATTATCGACTCGGGTACGTCCGTCACCCGGTTGACCCGATCCGCTTACATCTCATTAAGAGACGCTTTCCGGGCGGGTGCCCGATCTCTAAAACGGGCGCCCGAGTTTTCGCTCTTCGACACTTGCTTTGATCTATCTGGGAAGACGGAGGTGAAGGTTCCGACGGTGGTGCTGCATTTCCGCGGCGCTGACGTGTCGCTTCCGGCGACGAACTACCTGATTCCGGTGGATAGCAGCGGCACGTTCTGCTTTGCTTTTGCGGGTGCATGTTCATCTCTATAA

Protein Analysis

300

Amino Acids

31.99

Weight (kDa)

9.16

Isoelectric Point (pI)

41.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 1 - 152 5.4e-50 Xylanase inhibitor N-terminal
Asp PF00026 57 - 290 5.3e-10 Eukaryotic aspartyl protease
TAXi_C PF14541 174 - 293 2e-25 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015794)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G01300 AT3G61820
fragaria_vesca FvH4_7g16670
malus_domestica MD01G1082200.v1.1 MD07G1150600.v1.1
prunus_persica Prupe.2G189400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0359821
rosa_laevigata RLG00000027851
rosa_roxburghii Rroxscaffold_4G00296790
rosa_rugosa Rorug01G0272900
rosa_samantha Rh1AG286900 Rh1BG252700 Rh1CG269900 Rh1DG281700
rosa_wichuraiana Rw1G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 461
AatII GACGTC 1 cut(s) 27
Acc36I ACCTGC 1 cut(s) 188
AccB1I GGYRCC 3 cut(s) 317, 695, 715
AccBSI CCGCTC 2 cut(s) 258, 417
AccI GTMKAC 1 cut(s) 411
AccII CGCG 2 cut(s) 345, 801
AccIII TCCGGA 1 cut(s) 602
AclWI GGATC 1 cut(s) 651
AcoI YGGCCR 2 cut(s) 289, 340
AcsI RAATTY 1 cut(s) 392
AcvI CACGTG 1 cut(s) 560
AcyI GRCGYC 4 cut(s) 24, 318, 615, 716
AfaI GTAC 1 cut(s) 634
AfiI CCNNNNNNNGG 2 cut(s) 645, 841
AflIII ACRYGT 3 cut(s) 557, 559, 810
AgsI TTSAA 1 cut(s) 385
AjiI CACGTC 1 cut(s) 811
AjnI CCWGG 1 cut(s) 75
AluBI AGCT 4 cut(s) 165, 352, 508, 532
AluI AGCT 4 cut(s) 165, 352, 508, 532
Alw21I GWGCWC 1 cut(s) 534
Alw26I GTCTC 3 cut(s) 199, 469, 672
AlwI GGATC 1 cut(s) 651
Ama87I CYCGRG 3 cut(s) 88, 628, 719
Aor13HI TCCGGA 1 cut(s) 602
AoxI GGCC 6 cut(s) 289, 304, 325, 334, 340, 576
ApeKI GCWGC 6 cut(s) 57, 159, 162, 285, 790, 852
ApoI RAATTY 1 cut(s) 392
ArsI GACNNNNNNTTYG 4 cut(s) 65, 97, 728, 760
AspLEI GCGC 4 cut(s) 44, 320, 718, 806
AspS9I GGNCC 1 cut(s) 4
AsuC2I CCSGG 4 cut(s) 156, 566, 646, 689
AsuHPI GGTGA 4 cut(s) 208, 238, 634, 781
AvaI CYCGRG 3 cut(s) 88, 628, 719
AvaII GGWCC 1 cut(s) 4
BaeGI GKGCMC 1 cut(s) 700
BaeI ACNNNNGTAYC 2 cut(s) 624, 657
BanI GGYRCC 3 cut(s) 317, 695, 715
BanII GRGCYC 1 cut(s) 534
BbrPI CACGTG 1 cut(s) 560
BbsI GAAGAC 2 cut(s) 439, 767
Bbv12I GWGCWC 1 cut(s) 534
BbvI GCAGC 6 cut(s) 44, 146, 174, 272, 777, 864
BceAI ACGGC 5 cut(s) 217, 223, 446, 591, 625
BcgI CGANNNNNNTGC 2 cut(s) 769, 803
BciT130I CCWGG 1 cut(s) 77
BcnI CCSGG 4 cut(s) 156, 566, 646, 689
BcoDI GTCTC 3 cut(s) 199, 469, 672
BfmI CTRYAG 1 cut(s) 160
BfoI RGCGCY 3 cut(s) 321, 719, 807
BfuAI ACCTGC 1 cut(s) 188
BglI GCCNNNNNGGC 1 cut(s) 333
Bme1390I CCNGG 5 cut(s) 77, 156, 566, 646, 689
Bme18I GGWCC 1 cut(s) 4
BmeT110I CYCGRG 3 cut(s) 88, 628, 719
BmgBI CACGTC 1 cut(s) 811
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 7 cut(s) 19, 35, 211, 319, 697, 717, 777
BmrFI CCNGG 5 cut(s) 77, 156, 566, 646, 689
BoxI GACNNNNGTC 1 cut(s) 560
BpiI GAAGAC 2 cut(s) 439, 767
Bpu10I CCTNAGC 1 cut(s) 504
BpuMI CCSGG 4 cut(s) 156, 566, 646, 689
BsaAI YACGTR 1 cut(s) 560
BsaHI GRCGYC 4 cut(s) 24, 318, 615, 716
BsaJI CCNNGG 8 cut(s) 154, 280, 331, 337, 343, 535, 565, 799
BsaWI WCCGGW 2 cut(s) 602, 841
BsaXI ACNNNNNCTCC 3 cut(s) 32, 179, 209
Bsc4I CCNNNNNNNGG 2 cut(s) 645, 841
Bse118I RCCGGY 3 cut(s) 14, 323, 371
BseAI TCCGGA 1 cut(s) 602
BseBI CCWGG 1 cut(s) 77
BseDI CCNNGG 8 cut(s) 154, 280, 331, 337, 343, 535, 565, 799
BseLI CCNNNNNNNGG 2 cut(s) 645, 841
BseRI GAGGAG 8 cut(s) 91, 100, 115, 320, 415, 427, 477, 524
BseSI GKGCMC 1 cut(s) 700
BseX3I CGGCCG 1 cut(s) 340
BseXI GCAGC 6 cut(s) 44, 146, 174, 272, 777, 864
Bsh1236I CGCG 2 cut(s) 345, 801
Bsh1285I CGRYCG 2 cut(s) 343, 415
BshFI GGCC 6 cut(s) 291, 306, 327, 336, 342, 578
BshNI GGYRCC 3 cut(s) 317, 695, 715
BsiEI CGRYCG 2 cut(s) 343, 415
BsiHKAI GWGCWC 1 cut(s) 534
BsiHKCI CYCGRG 3 cut(s) 88, 628, 719
BslFI GGGAC 3 cut(s) 251, 479, 568
BslI CCNNNNNNNGG 2 cut(s) 645, 841
BsmAI GTCTC 3 cut(s) 199, 469, 672
BsmBI CGTCTC 2 cut(s) 469, 672
BsmFI GGGAC 3 cut(s) 251, 479, 568
BsnI GGCC 6 cut(s) 291, 306, 327, 336, 342, 578
BsoBI CYCGRG 3 cut(s) 88, 628, 719
Bsp1286I GDGCHC 2 cut(s) 534, 700
Bsp13I TCCGGA 1 cut(s) 602
Bsp143I GATC 3 cut(s) 656, 701, 748
BspANI GGCC 6 cut(s) 291, 306, 327, 336, 342, 578
BspEI TCCGGA 1 cut(s) 602
BspFNI CGCG 2 cut(s) 345, 801
BspLI GGNNCC 7 cut(s) 19, 35, 211, 319, 697, 717, 777
BspMAI CTGCAG 1 cut(s) 164
BspMI ACCTGC 1 cut(s) 188
BspPI GGATC 1 cut(s) 651
BspQI GCTCTTC 1 cut(s) 737
BspT107I GGYRCC 3 cut(s) 317, 695, 715
BsrBI CCGCTC 2 cut(s) 258, 417
BsrFI RCCGGY 3 cut(s) 14, 323, 371
BssAI RCCGGY 3 cut(s) 14, 323, 371
BssECI CCNNGG 8 cut(s) 154, 280, 331, 337, 343, 535, 565, 799
BssMI GATC 3 cut(s) 656, 701, 748
BssNI GRCGYC 4 cut(s) 24, 318, 615, 716
Bst2UI CCWGG 1 cut(s) 77
Bst4CI ACNGT 1 cut(s) 784
Bst6I CTCTTC 2 cut(s) 314, 737
BstACI GRCGYC 4 cut(s) 24, 318, 615, 716
BstAPI GCANNNNNTGC 1 cut(s) 864
BstBAI YACGTR 1 cut(s) 560
BstC8I GCNNGC 3 cut(s) 325, 350, 478
BstDEI CTNAG 1 cut(s) 504
BstDSI CCRYGG 2 cut(s) 343, 799
BstFNI CGCG 2 cut(s) 345, 801
BstH2I RGCGCY 3 cut(s) 321, 719, 807
BstHHI GCGC 4 cut(s) 44, 320, 718, 806
BstKTI GATC 3 cut(s) 659, 704, 751
BstMAI GTCTC 3 cut(s) 199, 469, 672
BstMBI GATC 3 cut(s) 656, 701, 748
BstMCI CGRYCG 2 cut(s) 343, 415
BstMWI GCNNNNNNNGC 6 cut(s) 324, 333, 342, 477, 689, 864
BstNI CCWGG 1 cut(s) 77
BstNSI RCATGY 1 cut(s) 888
BstPAI GACNNNNGTC 1 cut(s) 560
BstSCI CCNGG 5 cut(s) 75, 154, 564, 644, 687
BstSFI CTRYAG 1 cut(s) 160
BstSLI GKGCMC 1 cut(s) 700
BstUI CGCG 2 cut(s) 345, 801
BstV1I GCAGC 6 cut(s) 44, 146, 174, 272, 777, 864
BstV2I GAAGAC 2 cut(s) 439, 767
BstZI CGGCCG 1 cut(s) 340
BsuRI GGCC 6 cut(s) 291, 306, 327, 336, 342, 578
BtgI CCRYGG 2 cut(s) 343, 799
BtrI CACGTC 1 cut(s) 811
BveI ACCTGC 1 cut(s) 188
Cac8I GCNNGC 3 cut(s) 325, 350, 478
CfoI GCGC 4 cut(s) 44, 320, 718, 806
Cfr10I RCCGGY 3 cut(s) 14, 323, 371
Cfr13I GGNCC 1 cut(s) 4
Cfr42I CCGCGG 2 cut(s) 346, 802
CseI GACGC 3 cut(s) 535, 604, 689
CsiI ACCWGGT 1 cut(s) 75
Csp6I GTAC 1 cut(s) 633
CviAII CATG 1 cut(s) 885
CviQI GTAC 1 cut(s) 633
DdeI CTNAG 1 cut(s) 504
DinI GGCGCC 2 cut(s) 319, 717
DpnI GATC 3 cut(s) 658, 703, 750
DpnII GATC 3 cut(s) 656, 701, 748
DraI TTTAAA 1 cut(s) 589
DrdI GACNNNNNNGTC 1 cut(s) 461
DseDI GACNNNNNNGTC 1 cut(s) 461
EaeI YGGCCR 2 cut(s) 289, 340
EagI CGGCCG 1 cut(s) 340
Eam1104I CTCTTC 2 cut(s) 314, 737
EarI CTCTTC 2 cut(s) 314, 737
EciI GGCGGA 3 cut(s) 242, 409, 448
Ecl136II GAGCTC 1 cut(s) 532
EclXI CGGCCG 1 cut(s) 340
Eco147I AGGCCT 1 cut(s) 306
Eco24I GRGCYC 1 cut(s) 534
Eco47I GGWCC 1 cut(s) 4
Eco52I CGGCCG 1 cut(s) 340
Eco53kI GAGCTC 1 cut(s) 532
Eco72I CACGTG 1 cut(s) 560
Eco88I CYCGRG 3 cut(s) 88, 628, 719
EcoICRI GAGCTC 1 cut(s) 532
EcoRII CCWGG 1 cut(s) 75
EcoT38I GRGCYC 1 cut(s) 534
EgeI GGCGCC 2 cut(s) 319, 717
EheI GGCGCC 2 cut(s) 319, 717
Esp3I CGTCTC 2 cut(s) 469, 672
FaeI CATG 1 cut(s) 888
FaiI YATR 2 cut(s) 886, 898
FalI AAGNNNNNCTT 4 cut(s) 341, 373, 667, 699
FaqI GGGAC 3 cut(s) 251, 479, 568
FatI CATG 1 cut(s) 884
FauI CCCGC 5 cut(s) 476, 485, 545, 685, 871
FblI GTMKAC 1 cut(s) 411
FriOI GRGCYC 1 cut(s) 534
GlaI GCGC 4 cut(s) 43, 319, 717, 805
HaeII RGCGCY 3 cut(s) 321, 719, 807
HaeIII GGCC 6 cut(s) 291, 306, 327, 336, 342, 578
HgaI GACGC 3 cut(s) 535, 604, 689
HhaI GCGC 4 cut(s) 44, 320, 718, 806
Hin1I GRCGYC 4 cut(s) 24, 318, 615, 716
Hin1II CATG 1 cut(s) 888
Hin6I GCGC 4 cut(s) 42, 318, 716, 804
HinP1I GCGC 4 cut(s) 42, 318, 716, 804
HincII GTYRAC 2 cut(s) 412, 651
HindII GTYRAC 2 cut(s) 412, 651
HinfI GANTC 5 cut(s) 149, 455, 570, 626, 838
HphI GGTGA 4 cut(s) 208, 238, 634, 781
Hpy166II GTNNAC 3 cut(s) 53, 412, 651
Hpy188I TCNGA 2 cut(s) 22, 780
Hpy188III TCNNGA 1 cut(s) 603
Hpy8I GTNNAC 3 cut(s) 53, 412, 651
Hpy99I CGWCG 9 cut(s) 26, 29, 209, 317, 413, 446, 551, 784, 829
HpyAV CCTTC 6 cut(s) 223, 229, 259, 296, 609, 766
HpyCH4III ACNGT 1 cut(s) 784
HpyCH4IV ACGT 5 cut(s) 24, 559, 635, 810, 860
HpyCH4V TGCA 3 cut(s) 162, 793, 884
HpyF10VI GCNNNNNNNGC 6 cut(s) 324, 333, 342, 477, 689, 864
HpyF3I CTNAG 1 cut(s) 504
HpySE526I ACGT 5 cut(s) 24, 559, 635, 810, 860
Hsp92I GRCGYC 4 cut(s) 24, 318, 615, 716
Hsp92II CATG 1 cut(s) 888
HspAI GCGC 4 cut(s) 42, 318, 716, 804
KasI GGCGCC 2 cut(s) 317, 715
Kpn2I TCCGGA 1 cut(s) 602
KroI GCCGGC 1 cut(s) 323
KroNI GCCGGC 1 cut(s) 325
KspI CCGCGG 2 cut(s) 346, 802
Kzo9I GATC 3 cut(s) 656, 701, 748
LguI GCTCTTC 1 cut(s) 737
LmnI GCTCC 7 cut(s) 23, 39, 128, 215, 263, 422, 537
Lsp1109I GCAGC 6 cut(s) 44, 146, 174, 272, 777, 864
MabI ACCWGGT 1 cut(s) 75
MaeII ACGT 5 cut(s) 24, 559, 635, 810, 860
MaeIII GTNAC 1 cut(s) 640
MalI GATC 3 cut(s) 658, 703, 750
MbiI CCGCTC 2 cut(s) 258, 417
MboI GATC 3 cut(s) 656, 701, 748
MboII GAAGA 4 cut(s) 301, 439, 724, 772
MhlI GDGCHC 2 cut(s) 534, 700
MluCI AATT 1 cut(s) 392
Mly113I GGCGCC 2 cut(s) 318, 716
MlyI GAGTC 3 cut(s) 143, 449, 620
MmeI TCCRAC 2 cut(s) 45, 803
MroI TCCGGA 1 cut(s) 602
MroNI GCCGGC 1 cut(s) 323
MseI TTAA 2 cut(s) 588, 674
MspA1I CMGCKG 3 cut(s) 345, 801, 855
MspR9I CCNGG 5 cut(s) 77, 156, 566, 646, 689
MssI GTTTAAAC 1 cut(s) 589
MvaI CCWGG 1 cut(s) 77
MvnI CGCG 2 cut(s) 345, 801
MwoI GCNNNNNNNGC 6 cut(s) 324, 333, 342, 477, 689, 864
NaeI GCCGGC 1 cut(s) 325
NarI GGCGCC 2 cut(s) 318, 716
NciI CCSGG 4 cut(s) 156, 566, 646, 689
NdeII GATC 3 cut(s) 656, 701, 748
NgoMIV GCCGGC 1 cut(s) 323
NlaIII CATG 1 cut(s) 888
NlaIV GGNNCC 7 cut(s) 19, 35, 211, 319, 697, 717, 777
NmeAIII GCCGAG 3 cut(s) 261, 312, 318
NmuCI GTSAC 1 cut(s) 640
NspI RCATGY 1 cut(s) 888
PceI AGGCCT 1 cut(s) 306
PciSI GCTCTTC 1 cut(s) 737
PcsI WCGNNNNNNNCGW 3 cut(s) 450, 543, 821
PdiI GCCGGC 1 cut(s) 325
PfeI GAWTC 2 cut(s) 570, 838
PflFI GACNNNGTC 1 cut(s) 26
PleI GAGTC 3 cut(s) 143, 449, 620
PluTI GGCGCC 2 cut(s) 321, 719
PmaCI CACGTG 1 cut(s) 560
PmeI GTTTAAAC 1 cut(s) 589
PmlI CACGTG 1 cut(s) 560
PpsI GAGTC 3 cut(s) 143, 449, 620
Ppu21I YACGTR 1 cut(s) 560
PshAI GACNNNNGTC 1 cut(s) 560
Psp124BI GAGCTC 1 cut(s) 534
Psp6I CCWGG 1 cut(s) 75
PspCI CACGTG 1 cut(s) 560
PspGI CCWGG 1 cut(s) 75
PspN4I GGNNCC 7 cut(s) 19, 35, 211, 319, 697, 717, 777
PspPI GGNCC 1 cut(s) 4
PstI CTGCAG 1 cut(s) 164
PsyI GACNNNGTC 1 cut(s) 26
RsaI GTAC 1 cut(s) 634
RsaNI GTAC 1 cut(s) 633
SacI GAGCTC 1 cut(s) 534
SacII CCGCGG 2 cut(s) 346, 802
SalI GTCGAC 1 cut(s) 410
SapI GCTCTTC 1 cut(s) 737
SaqAI TTAA 2 cut(s) 588, 674
Sau3AI GATC 3 cut(s) 656, 701, 748
Sau96I GGNCC 1 cut(s) 4
SchI GAGTC 3 cut(s) 143, 449, 620
ScrFI CCNGG 5 cut(s) 77, 156, 566, 646, 689
SduI GDGCHC 2 cut(s) 534, 700
SexAI ACCWGGT 1 cut(s) 75
SfcI CTRYAG 1 cut(s) 160
SfiI GGCCNNNNNGGCC 1 cut(s) 333
SfoI GGCGCC 2 cut(s) 319, 717
Sfr303I CCGCGG 2 cut(s) 346, 802
SgrBI CCGCGG 2 cut(s) 346, 802
SinI GGWCC 1 cut(s) 4
Sse9I AATT 1 cut(s) 392
SseBI AGGCCT 1 cut(s) 306
SspDI GGCGCC 2 cut(s) 317, 715
SstI GAGCTC 1 cut(s) 534
StuI AGGCCT 1 cut(s) 306
StyD4I CCNGG 5 cut(s) 75, 154, 564, 644, 687
TaaI ACNGT 1 cut(s) 784
TaiI ACGT 5 cut(s) 27, 562, 638, 813, 863
TaqI TCGA 9 cut(s) 9, 84, 147, 411, 510, 528, 594, 624, 735
TasI AATT 1 cut(s) 392
TfiI GAWTC 2 cut(s) 570, 838
Tru1I TTAA 2 cut(s) 588, 674
Tru9I TTAA 2 cut(s) 588, 674
TseFI GTSAC 1 cut(s) 640
TseI GCWGC 6 cut(s) 57, 159, 162, 285, 790, 852
Tsp45I GTSAC 1 cut(s) 640
TspDTI ATGAA 1 cut(s) 879
TspGWI ACGGA 3 cut(s) 430, 628, 779
Tth111I GACNNNGTC 1 cut(s) 26
VpaK11BI GGWCC 1 cut(s) 4
XapI RAATTY 1 cut(s) 392
XceI RCATGY 1 cut(s) 888
XmiI GTMKAC 1 cut(s) 411
ZraI GACGTC 1 cut(s) 25
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.