FvH4_7g27860

Domain associated at C-terminal with AAA

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0018082
Physical Location & Seq
Forward (+)
20736118 .. 20739459
3342 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g27860.t1

Sequence Viewer

Length: 2046 bp
ATGCAAGAAAAGAAGGTGACGCTGTCGGGGTTGCTCAACATGATTGATGGTCTGTGGTCAAGCTGTGGTGATCAGAGACTCATTGTGTTCACTACAAACTACAAGGATAAACTAGACCCTGCATTGTTGCGTCCGGGACGAATGGACGTGCATATACACATGTCGTATTGCACTGCGAGTGGGTTCAGGATCTTGGCTTCGAACTACCTTGACATTCAGGAGAGCAATCCTCATCCTCCCTGCAGAGAAATTGAAGTGTTGATAGAGAGCATGGAGGTCACTCCTGCACAGGTTGCAGGGGAGCTACAGGTGAGTAATGACGCTGATGTTGCCCTTACAGGGCTTCTGGATTTCCTCAAGGATATGAAGACGAAGAACGAAGAGAAGAAGAAGAACGAAGAGGAGAAGAAAAAAGAGGAAGAAGAGGCAGAGACAACTCACACAAGTACAACGATGAAACTAACAAAGAAAATATTGATGTCTAGGTTTTTCTGTTCTGCCTTGGACGAAATTGTTTTTGTATTTGAATTAGAAATCCTTGTCTTTCAGGCTTGTGCTACTTTGTTAAGAATCAAAGAGTGTTCCAGTTTCTTACAACCAGTTCTAGTTTCTCAGAAACCAATTGGTAACCTAGCTGATAACACAATGTCCGCCTTGTTATCAACTGCTGCTTCCTTTGCTGCAACACTGATGTTGGGTCGTTCCATGGTGGAGCAAGTCTTCGGCAACTACTCATTCCTCAAGAAACTCTTGGCTTTCTTCCGTTCTGAGCTGACTTTCGTCGTCGTGGAGTACACCGAAGTAGGAGAACGGAATAAGATTTACGACTCCGTGGAGCCCTACCTCCGAGCCAAACTCGGCACCAAAACGAAGCGTGTCAGAGTCAGCAAAACCAACAGGCAAAAGACCACCAGCTTTACCCTCGACAACTATCAAGAAGTCACAGACACATTCGAGAACTTCAGTATCAAGTGGCGTTACATCTGCATTGAACCAAAGGATCATCACTTTGAAGAGAAACGTTACTATGAGCTGAGATTCCACAAGAAGCACAGAGACAGAATGAGCTCCTACTTGGACTATGTCGTTGCTCAAGCTAAAGAGATCAAAGATGCTGAAAAGGTTCTCAGAATTTATTCTCGTCGCACTGCAGGTACCTACAAGTACTGGGAATCGACTATACTAGAGCATCCTTGTACTTTTGAGACACTGGCCATGGATCCATCCGAGAAGAAAAAGATCCTGGAGGATTTGGATATGTTTGTGCAGAGGAAGGAGTTCTATAAGCATGTAGGCAAGGCTTGGAAGAGAGGCTACTTGTTATATGGTCCGCCTGGTACTGGCAAATCCAGCTTGATTGCGGCCATGGCTAATTACCTCAACTACAATATATATGATTTGGAGCTTACAAGCATCTCCAACAATGCTGATCTGAGGCAGTCTCTGCTGTCTACCACCAATCGCTCTATTTTGATAATAGAGGACATTGATTGCACCTTGGATATACAGAACCGTGAGAAAGAGGAGGAGGACTCAGATGATGAAGTAATTGTCCTGACTAAGGGTAAGAACCAGCTAAAGCAACAGAGTGTGACGCTTTCGGGGCTACTGAACTTCATTGATGGTCTGTGGTCAAGCTGTGGTGATGAGAGAATCATTGTGTTCACAACCAACTACAAGGATAAACTAGACCCTGCATTGCTGAGGCCGGGACGAATGGACATGCATATACACATGTCGTACTGCACTGTGAGTGGATTCAAGATCCTGGCATATAGGTACCTTGGCATTCATGATCATCCTCTCTATAAAAAAATTGAAGGGATGATACAGGCCACAGAGGTCACTCCGGCACAGGTTGCTGGGCAGCTACAGGTGAGTAATGATGCTGATGTCGCTCTTGCAGAGCTTGTGAAATTCATTAAGGAAAAGGAGGAGGAGGATGAAAAGAAGAAGAAGGCAAAGAAGAAAAAAGAAGCAGAAGCAAAGAAACTAAAGAGAAAAAGGTTGCTGAATCTTTTTCAGAGGATCAAGGAAATTACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA AAA_assoc

Protein Analysis

682

Amino Acids

78.46

Weight (kDa)

8.06

Isoelectric Point (pI)

46.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_lid_At3g28540 PF25568 57 - 132 6.5e-17 At3g28540-like, AAA+ ATPase lid domain
AAA_assoc PF14363 245 - 329 1.8e-17 Domain associated at C-terminal with AAA
AAA PF00004 439 - 580 6.4e-19 ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540 PF25568 582 - 652 9e-21 At3g28540-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018082)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g27860
rosa_chinensis RchiOBHm_Chr1g0374801
rosa_laevigata RLG00000026714 RLG00000026717
rosa_multiflora Rmu_co8506051.1_g000001
rosa_roxburghii Rroxscaffold_4G00283270
rosa_rugosa Rorug01G0384900
rosa_samantha Rh1AG396400 Rh1BG360500 Rh1CG373900
rosa_wichuraiana Rw1G035140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1142
Acc65I GGTACC 2 cut(s) 1154, 1779
AccB1I GGYRCC 3 cut(s) 860, 1154, 1779
AccI GTMKAC 1 cut(s) 1451
AciI CCGC 3 cut(s) 651, 1331, 1361
AclI AACGTT 1 cut(s) 1021
AclWI GGATC 7 cut(s) 197, 1008, 1214, 1227, 1234, 1759, 2036
AcoI YGGCCR 2 cut(s) 1212, 1362
AcsI RAATTY 2 cut(s) 1131, 1916
AcuI CTGAAG 1 cut(s) 946
AfaI GTAC 8 cut(s) 448, 794, 1156, 1166, 1198, 1339, 1742, 1781
AfiI CCNNNNNNNGG 3 cut(s) 339, 1340, 1561
AflIII ACRYGT 2 cut(s) 159, 1734
AgsI TTSAA 6 cut(s) 254, 527, 992, 1013, 1762, 1820
AjiI CACGTC 1 cut(s) 148
AjnI CCWGG 3 cut(s) 1242, 1333, 1767
Alw21I GWGCWC 1 cut(s) 1070
Alw26I GTCTC 5 cut(s) 70, 425, 1050, 1199, 1446
AlwI GGATC 7 cut(s) 197, 1008, 1214, 1227, 1234, 1759, 2036
AlwNI CAGNNNCTG 1 cut(s) 1444
AoxI GGCC 4 cut(s) 1212, 1362, 1706, 1833
ApeKI GCWGC 3 cut(s) 668, 680, 1867
ApoI RAATTY 2 cut(s) 1131, 1916
Asp700I GAANNNNTTC 3 cut(s) 1122, 1135, 1277
Asp718I GGTACC 2 cut(s) 1154, 1779
AspS9I GGNCC 1 cut(s) 1328
AsuC2I CCSGG 2 cut(s) 135, 1710
AsuHPI GGTGA 5 cut(s) 28, 80, 322, 1655, 1888
AsuII TTCGAA 1 cut(s) 200
AvaII GGWCC 1 cut(s) 1328
BaeI ACNNNNGTAYC 2 cut(s) 949, 982
BalI TGGCCA 1 cut(s) 1214
BamHI GGATCC 1 cut(s) 1219
BanI GGYRCC 3 cut(s) 860, 1154, 1779
BanII GRGCYC 2 cut(s) 840, 1070
BarI GAAGNNNNNNTAC 4 cut(s) 1298, 1330, 1812, 1844
BbsI GAAGAC 2 cut(s) 374, 712
Bbv12I GWGCWC 1 cut(s) 1070
BbvCI CCTCAGC 1 cut(s) 1703
BbvI GCAGC 3 cut(s) 655, 667, 1879
BccI CCATC 3 cut(s) 41, 1231, 1616
BciT130I CCWGG 3 cut(s) 1244, 1335, 1769
BclI TGATCA 2 cut(s) 70, 1795
BcnI CCSGG 2 cut(s) 135, 1710
BcoDI GTCTC 5 cut(s) 70, 425, 1050, 1199, 1446
BfaI CTAG 6 cut(s) 113, 483, 605, 632, 1184, 1688
BfmI CTRYAG 4 cut(s) 241, 305, 1149, 1871
BfuAI ACCTGC 1 cut(s) 1142
BisI GCNGC 4 cut(s) 669, 681, 1362, 1868
BlsI GCNGC 4 cut(s) 670, 682, 1363, 1869
BmcAI AGTACT 1 cut(s) 1166
Bme1390I CCNGG 5 cut(s) 135, 1244, 1335, 1710, 1769
Bme18I GGWCC 1 cut(s) 1328
BmgBI CACGTC 1 cut(s) 148
BmgT120I GGNCC 1 cut(s) 1328
BmiI GGNNCC 5 cut(s) 837, 862, 1156, 1221, 1781
BmrFI CCNGG 5 cut(s) 135, 1244, 1335, 1710, 1769
BmrI ACTGGG 1 cut(s) 1177
BmsI GCATC 4 cut(s) 1102, 1198, 1422, 1876
BmuI ACTGGG 1 cut(s) 1177
BoxI GACNNNNGTC 1 cut(s) 779
BpiI GAAGAC 2 cut(s) 374, 712
BplI GAGNNNNNCTC 8 cut(s) 214, 246, 840, 872, 1426, 1458, 1517, 1549
BpmI CTGGAG 1 cut(s) 1265
Bpu10I CCTNAGC 1 cut(s) 1703
Bpu14I TTCGAA 1 cut(s) 200
BpuEI CTTGAG 3 cut(s) 341, 725, 1077
BpuMI CCSGG 2 cut(s) 135, 1710
BsaJI CCNNGG 7 cut(s) 501, 705, 831, 1215, 1365, 1497, 1783
Bsc4I CCNNNNNNNGG 3 cut(s) 339, 1340, 1561
Bse1I ACTGG 5 cut(s) 585, 599, 1172, 1215, 1345
Bse3DI GCAATG 1 cut(s) 1697
BseBI CCWGG 3 cut(s) 1244, 1335, 1769
BseDI CCNNGG 7 cut(s) 501, 705, 831, 1215, 1365, 1497, 1783
BseGI GGATG 6 cut(s) 232, 1189, 1223, 1798, 1830, 1948
BseLI CCNNNNNNNGG 3 cut(s) 339, 1340, 1561
BseMI GCAATG 1 cut(s) 1697
BseMII CTCAG 7 cut(s) 626, 759, 1025, 1141, 1424, 1548, 1694
BseNI ACTGG 5 cut(s) 585, 599, 1172, 1215, 1345
BseRI GAGGAG 5 cut(s) 416, 1538, 1541, 1949, 1952
BseXI GCAGC 3 cut(s) 655, 667, 1879
BseYI CCCAGC 1 cut(s) 1862
BsgI GTGCAG 3 cut(s) 270, 1286, 1729
BshFI GGCC 4 cut(s) 1214, 1364, 1708, 1835
BshNI GGYRCC 3 cut(s) 860, 1154, 1779
BsiHKAI GWGCWC 1 cut(s) 1070
BsiSI CCGG 3 cut(s) 134, 1709, 1850
BslFI GGGAC 2 cut(s) 150, 1725
BslI CCNNNNNNNGG 3 cut(s) 339, 1340, 1561
BsmAI GTCTC 5 cut(s) 70, 425, 1050, 1199, 1446
BsmFI GGGAC 2 cut(s) 150, 1725
BsmI GAATGC 1 cut(s) 1788
BsnI GGCC 4 cut(s) 1214, 1364, 1708, 1835
Bsp119I TTCGAA 1 cut(s) 200
Bsp1286I GDGCHC 2 cut(s) 840, 1070
Bsp19I CCATGG 3 cut(s) 705, 1215, 1365
BspACI CCGC 3 cut(s) 651, 1331, 1361
BspANI GGCC 4 cut(s) 1214, 1364, 1708, 1835
BspCNI CTCAG 7 cut(s) 625, 760, 1026, 1140, 1425, 1547, 1695
BspHI TCATGA 1 cut(s) 1792
BspLI GGNNCC 5 cut(s) 837, 862, 1156, 1221, 1781
BspMAI CTGCAG 2 cut(s) 245, 1153
BspMI ACCTGC 1 cut(s) 1142
BspPI GGATC 7 cut(s) 197, 1008, 1214, 1227, 1234, 1759, 2036
BspT104I TTCGAA 1 cut(s) 200
BspT107I GGYRCC 3 cut(s) 860, 1154, 1779
BsrDI GCAATG 1 cut(s) 1697
BsrI ACTGG 5 cut(s) 585, 599, 1172, 1215, 1345
BssECI CCNNGG 7 cut(s) 501, 705, 831, 1215, 1365, 1497, 1783
BssT1I CCWWGG 6 cut(s) 501, 705, 1215, 1365, 1497, 1783
Bst2UI CCWGG 3 cut(s) 1244, 1335, 1769
Bst4CI ACNGT 2 cut(s) 1514, 1750
Bst6I CTCTTC 5 cut(s) 375, 393, 417, 1008, 1301
BstAPI GCANNNNNTGC 3 cut(s) 293, 1444, 1859
BstBI TTCGAA 1 cut(s) 200
BstDEI CTNAG 8 cut(s) 612, 768, 1034, 1127, 1433, 1534, 1560, 1703
BstDSI CCRYGG 4 cut(s) 705, 831, 1215, 1365
BstEII GGTNACC 1 cut(s) 626
BstENI CCTNNNNNAGG 1 cut(s) 1559
BstF5I GGATG 6 cut(s) 232, 1189, 1223, 1798, 1830, 1948
BstMAI GTCTC 5 cut(s) 70, 425, 1050, 1199, 1446
BstMWI GCNNNNNNNGC 9 cut(s) 293, 329, 677, 1350, 1367, 1444, 1603, 1859, 1895
BstNI CCWGG 3 cut(s) 1244, 1335, 1769
BstNSI RCATGY 4 cut(s) 163, 1292, 1726, 1738
BstPAI GACNNNNGTC 1 cut(s) 779
BstPI GGTNACC 1 cut(s) 626
BstSCI CCNGG 5 cut(s) 133, 1242, 1333, 1708, 1767
BstSFI CTRYAG 4 cut(s) 241, 305, 1149, 1871
BstV1I GCAGC 3 cut(s) 655, 667, 1879
BstV2I GAAGAC 2 cut(s) 374, 712
BstX2I RGATCY 4 cut(s) 189, 1219, 1239, 1764
BstYI RGATCY 4 cut(s) 189, 1219, 1239, 1764
BsuRI GGCC 4 cut(s) 1214, 1364, 1708, 1835
BtgI CCRYGG 4 cut(s) 705, 831, 1215, 1365
BtrI CACGTC 1 cut(s) 148
BtsCI GGATG 6 cut(s) 232, 1189, 1223, 1798, 1830, 1948
BtsI GCAGTG 2 cut(s) 171, 1146
BtsIMutI CAGTG 5 cut(s) 171, 686, 1146, 1208, 1746
BveI ACCTGC 1 cut(s) 1142
CaiI CAGNNNCTG 1 cut(s) 1444
CciI TCATGA 1 cut(s) 1792
Cfr13I GGNCC 1 cut(s) 1328
CseI GACGC 4 cut(s) 28, 119, 329, 1603
Csp6I GTAC 8 cut(s) 447, 793, 1155, 1165, 1197, 1338, 1741, 1780
CviQI GTAC 8 cut(s) 447, 793, 1155, 1165, 1197, 1338, 1741, 1780
DdeI CTNAG 8 cut(s) 612, 768, 1034, 1127, 1433, 1534, 1560, 1703
EaeI YGGCCR 2 cut(s) 1212, 1362
Eam1104I CTCTTC 5 cut(s) 375, 393, 417, 1008, 1301
EarI CTCTTC 5 cut(s) 375, 393, 417, 1008, 1301
EciI GGCGGA 2 cut(s) 640, 1320
Ecl136II GAGCTC 1 cut(s) 1068
Eco130I CCWWGG 6 cut(s) 501, 705, 1215, 1365, 1497, 1783
Eco24I GRGCYC 2 cut(s) 840, 1070
Eco47I GGWCC 1 cut(s) 1328
Eco53kI GAGCTC 1 cut(s) 1068
Eco57I CTGAAG 1 cut(s) 946
Eco91I GGTNACC 1 cut(s) 626
EcoICRI GAGCTC 1 cut(s) 1068
EcoNI CCTNNNNNAGG 1 cut(s) 1559
EcoO65I GGTNACC 1 cut(s) 626
EcoRII CCWGG 3 cut(s) 1242, 1333, 1767
EcoT14I CCWWGG 6 cut(s) 501, 705, 1215, 1365, 1497, 1783
EcoT22I ATGCAT 1 cut(s) 1728
EcoT38I GRGCYC 2 cut(s) 840, 1070
ErhI CCWWGG 6 cut(s) 501, 705, 1215, 1365, 1497, 1783
FalI AAGNNNNNCTT 2 cut(s) 734, 766
FaqI GGGAC 2 cut(s) 150, 1725
FbaI TGATCA 2 cut(s) 70, 1795
FblI GTMKAC 1 cut(s) 1451
Fnu4HI GCNGC 4 cut(s) 669, 681, 1362, 1868
FokI GGATG 6 cut(s) 219, 1176, 1210, 1785, 1837, 1955
FriOI GRGCYC 2 cut(s) 840, 1070
Fsp4HI GCNGC 4 cut(s) 669, 681, 1362, 1868
FspBI CTAG 6 cut(s) 113, 483, 605, 632, 1184, 1688
GluI GCNGC 4 cut(s) 669, 681, 1362, 1868
GsaI CCCAGC 1 cut(s) 1866
GsuI CTGGAG 1 cut(s) 1265
HaeIII GGCC 4 cut(s) 1214, 1364, 1708, 1835
HapII CCGG 3 cut(s) 134, 1709, 1850
HgaI GACGC 4 cut(s) 28, 119, 329, 1603
HpaII CCGG 3 cut(s) 134, 1709, 1850
HphI GGTGA 5 cut(s) 28, 80, 322, 1655, 1888
Hpy166II GTNNAC 4 cut(s) 90, 795, 1452, 1665
Hpy188III TCNNGA 9 cut(s) 187, 218, 347, 742, 935, 955, 1555, 1762, 1793
Hpy8I GTNNAC 4 cut(s) 90, 795, 1452, 1665
Hpy99I CGWCG 3 cut(s) 785, 788, 1146
HpyAV CCTTC 4 cut(s) 7, 1267, 1814, 1951
HpyCH4III ACNGT 2 cut(s) 1514, 1750
HpyCH4IV ACGT 2 cut(s) 147, 1021
HpyF10VI GCNNNNNNNGC 9 cut(s) 293, 329, 677, 1350, 1367, 1444, 1603, 1859, 1895
HpyF3I CTNAG 8 cut(s) 612, 768, 1034, 1127, 1433, 1534, 1560, 1703
HpySE526I ACGT 2 cut(s) 147, 1021
KpnI GGTACC 2 cut(s) 1158, 1783
Ksp22I TGATCA 2 cut(s) 70, 1795
LmnI GCTCC 5 cut(s) 301, 712, 835, 1073, 1402
Lsp1109I GCAGC 3 cut(s) 655, 667, 1879
LweI GCATC 4 cut(s) 1102, 1198, 1422, 1876
MaeI CTAG 6 cut(s) 113, 483, 605, 632, 1184, 1688
MaeII ACGT 2 cut(s) 147, 1021
MaeIII GTNAC 8 cut(s) 16, 277, 626, 940, 977, 1022, 1591, 1843
MfeI CAATTG 1 cut(s) 621
MflI RGATCY 4 cut(s) 189, 1219, 1239, 1764
MhlI GDGCHC 2 cut(s) 840, 1070
MlsI TGGCCA 1 cut(s) 1214
MluNI TGGCCA 1 cut(s) 1214
MlyI GAGTC 4 cut(s) 72, 821, 891, 1526
MmeI TCCRAC 1 cut(s) 1443
Mox20I TGGCCA 1 cut(s) 1214
Mph1103I ATGCAT 1 cut(s) 1728
MroXI GAANNNNTTC 3 cut(s) 1122, 1135, 1277
MscI TGGCCA 1 cut(s) 1214
MseI TTAA 2 cut(s) 566, 1923
Msp20I TGGCCA 1 cut(s) 1214
MspI CCGG 3 cut(s) 134, 1709, 1850
MspR9I CCNGG 5 cut(s) 135, 1244, 1335, 1710, 1769
MunI CAATTG 1 cut(s) 621
Mva1269I GAATGC 1 cut(s) 1788
MvaI CCWGG 3 cut(s) 1244, 1335, 1769
MwoI GCNNNNNNNGC 9 cut(s) 293, 329, 677, 1350, 1367, 1444, 1603, 1859, 1895
NciI CCSGG 2 cut(s) 135, 1710
NcoI CCATGG 3 cut(s) 705, 1215, 1365
NlaIV GGNNCC 5 cut(s) 837, 862, 1156, 1221, 1781
NmeAIII GCCGAG 1 cut(s) 837
NmuCI GTSAC 5 cut(s) 16, 277, 940, 1591, 1843
NsiI ATGCAT 1 cut(s) 1728
NspI RCATGY 4 cut(s) 163, 1292, 1726, 1738
NspV TTCGAA 1 cut(s) 200
PagI TCATGA 1 cut(s) 1792
PciI ACATGT 2 cut(s) 159, 1734
PctI GAATGC 1 cut(s) 1788
PdmI GAANNNNTTC 3 cut(s) 1122, 1135, 1277
PfeI GAWTC 6 cut(s) 570, 1038, 1172, 1653, 1758, 2014
PflFI GACNNNGTC 2 cut(s) 22, 1082
PfoI TCCNGGA 2 cut(s) 133, 1242
PkrI GCNGC 4 cut(s) 670, 682, 1363, 1869
PleI GAGTC 4 cut(s) 72, 821, 890, 1526
PpsI GAGTC 4 cut(s) 72, 821, 890, 1526
PscI ACATGT 2 cut(s) 159, 1734
PshAI GACNNNNGTC 1 cut(s) 779
Psp124BI GAGCTC 1 cut(s) 1070
Psp1406I AACGTT 1 cut(s) 1021
Psp6I CCWGG 3 cut(s) 1242, 1333, 1767
PspEI GGTNACC 1 cut(s) 626
PspFI CCCAGC 1 cut(s) 1862
PspGI CCWGG 3 cut(s) 1242, 1333, 1767
PspN4I GGNNCC 5 cut(s) 837, 862, 1156, 1221, 1781
PspPI GGNCC 1 cut(s) 1328
PstI CTGCAG 2 cut(s) 245, 1153
PstNI CAGNNNCTG 1 cut(s) 1444
PsuI RGATCY 4 cut(s) 189, 1219, 1239, 1764
PsyI GACNNNGTC 2 cut(s) 22, 1082
RsaI GTAC 8 cut(s) 448, 794, 1156, 1166, 1198, 1339, 1742, 1781
RsaNI GTAC 8 cut(s) 447, 793, 1155, 1165, 1197, 1338, 1741, 1780
SacI GAGCTC 1 cut(s) 1070
SaqAI TTAA 2 cut(s) 566, 1923
SatI GCNGC 4 cut(s) 669, 681, 1362, 1868
Sau96I GGNCC 1 cut(s) 1328
ScaI AGTACT 1 cut(s) 1166
SchI GAGTC 4 cut(s) 72, 821, 891, 1526
ScrFI CCNGG 5 cut(s) 135, 1244, 1335, 1710, 1769
SduI GDGCHC 2 cut(s) 840, 1070
SfaNI GCATC 4 cut(s) 1102, 1198, 1422, 1876
SfcI CTRYAG 4 cut(s) 241, 305, 1149, 1871
SfuI TTCGAA 1 cut(s) 200
SinI GGWCC 1 cut(s) 1328
SmlI CTYRAG 3 cut(s) 356, 740, 1092
SmoI CTYRAG 3 cut(s) 356, 740, 1092
SsiI CCGC 3 cut(s) 651, 1331, 1361
SspI AATATT 1 cut(s) 474
SspMI CTAG 6 cut(s) 113, 483, 605, 632, 1184, 1688
SstI GAGCTC 1 cut(s) 1070
StyD4I CCNGG 5 cut(s) 133, 1242, 1333, 1708, 1767
StyI CCWWGG 6 cut(s) 501, 705, 1215, 1365, 1497, 1783
TaaI ACNGT 2 cut(s) 1514, 1750
TaiI ACGT 2 cut(s) 150, 1024
TaqI TCGA 4 cut(s) 200, 924, 954, 1175
TatI WGTACW 4 cut(s) 446, 792, 1164, 1196
TauI GCSGC 1 cut(s) 1364
TfiI GAWTC 6 cut(s) 570, 1038, 1172, 1653, 1758, 2014
Tru1I TTAA 2 cut(s) 566, 1923
Tru9I TTAA 2 cut(s) 566, 1923
TscAI CASTG 5 cut(s) 178, 693, 1153, 1215, 1753
TseFI GTSAC 5 cut(s) 16, 277, 940, 1591, 1843
TseI GCWGC 3 cut(s) 668, 680, 1867
Tsp45I GTSAC 5 cut(s) 16, 277, 940, 1591, 1843
TspDTI ATGAA 7 cut(s) 380, 470, 1557, 1606, 1781, 1909, 1959
TspGWI ACGGA 3 cut(s) 752, 820, 826
TspRI CASTG 5 cut(s) 178, 693, 1153, 1215, 1753
Tth111I GACNNNGTC 2 cut(s) 22, 1082
VpaK11BI GGWCC 1 cut(s) 1328
XagI CCTNNNNNAGG 1 cut(s) 1559
XapI RAATTY 2 cut(s) 1131, 1916
XceI RCATGY 4 cut(s) 163, 1292, 1726, 1738
XmiI GTMKAC 1 cut(s) 1451
XmnI GAANNNNTTC 3 cut(s) 1122, 1135, 1277
XspI CTAG 6 cut(s) 113, 483, 605, 632, 1184, 1688
ZrmI AGTACT 1 cut(s) 1166
Zsp2I ATGCAT 1 cut(s) 1728
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.