FvH4_7g32140

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0009257
Physical Location & Seq
Reverse (-)
23127470 .. 23132034
4565 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g32140.t2

Sequence Viewer

Length: 2130 bp
ATGGGGAGTCTTAGTGAAGAAGAATTCGGGTTTTTCGATGCCCATGAGGAGATTGCATCAGTGTCTGATGCAAGTGGTGAGAACATTGAGGTGTTGGATACGAGTTCTAGTGCTGTGAGTTGGGTTCGGGATAGTTTTCCTTATGATGTGTGGGTTAGAAGCCCTGGGAGTGTGAAGGAGAGACGGGTTAGGTTTCTGGATTGGATGGAAGTTAGTGCAGAGCAGATTGTGAGGGAGAATTTGGTGGAAGTGTCTAGTGATGTGTCGAGGGAAATAAGTAGAGTTAGAGAGAGTAGTGGGGCGGTGTTGAGATCCTTATCTTTCGAAGGTGAGTTCTCTTCAAGTCGCTCTTCAATGTCGTTTTGGGCTAATGAATTTAGGGATGGGAGTTTGAGTGGGAGAATGGTGTGTAATGGAGATGAAGTGGGGCTGGATGGGAAGGTCAGTGAAGGTCGAGAAGTTACTGAAGAGTCCGAGGAGCGCACTTCATGTTCATCGTCTTCCTTATCTCATCGACTGAGTGAAAGAAGAGCTGAAGAGATTACTGATAAGGGGGCGATACTGAAGAGAGTTAAGAAGAAGTGGTTGAGTAGATTGCGGTCCATGACATGCCTTGATGATAAGCAAAGGATTGCTGACAGGTCACCGGAGAATGATGATGATACAGTTATGGGGATAAGGTCTCATAGAATGAAGGTTCGCCATTCCGGGAAGCGGTTGAAGGAACTCTCAGCTCTTTACATGGGGCAGGATATCCAGGCCCATGAGGGTTCAATTTTCGCCATGAAATTTAGTCCTGATGGACAGTACCTAGCAAGTGCTGGTGAAGATGGGATTGTGCGAGTCTGGCAAGTGGTGGAGAATCAAAGGTGTAATGAACTTGACATTCCGGAAATAGATCCATCCTGCATATACTTCACCGTGAATCATCTCTCTGAACTGAATCCACTATTTGCGGATAAAGAGAAAGTGAGCAAAGCACGTAGCATGAGGAAAACTTCAGATTCAGCATGTGTCATATTCCCCCCTAAAATCTTTCGGATAGTTGACAAACCATTGCATGAGTTTCATGGGCATGGTGGTGAAGTTTTGGATCTCTCCTGGTCAAGGAACAATTATCTCCTGTCGTCTTCAGTTGACAAAACTGTTCGTCTATGGCAAGTGGGATGCACTGATTGCGTCAAGGTCTTTGCCCATAGTAATTATGTGACCTGTGTTCAATTCAATCCTGTGGATGATAATTACTTCATTAGTGGTTCAATAGATGGCAAAGTTCGCATTTGGGGAATTCCTTGCAGTCAAGTTGTTGATTACAGTGATGTACGAGATATAGTTTCTGCGGTGTGCTATCGCCCTGATGGGCAGGGTGCTATTGTAGGCTCAATGACGGGCATATGCCGCTTTTATAATATATCAGATAATCATTTGCAAATGGATGCTGAAATATGTTTGTACAGTAAAAAGAAGGCTCCCTGCAAAAAGATAACAGGCTTTGAGTATTTCCCTCATGATCCTGACAAAGTAATGGTCACTTGCGCCGATTCACAAGTCAGAATTCTTCATGGTTTGAATGTGGTTGGAAAATACAAGGGATTAAAGAATGCAGCAAACCTGCGATCTGCCACTTTCACTTCAGATGGGAAACATATAATATCAGCAAGTGAGGATTCTAATGTATATATATGGAACTGCAGTGATCAGGAGAAAAGCTTTTTCTCTCAGGCAAAAAGTACTAGATCATGTGAGCGGTTCACCATGGATGCTTCCGTAGCAATACCGTGGTCTGGTTTGAAATGTGAGGCCTTAGAACATGCAGGAAAATTTGGTGTTGTGGAAAATAAATTTCCAGAAACTCTGCCTTTTTCTTCACCTGCATGCTTTTCTCTGAGCCAAGAATCTTTCCTCGAGTCTATTCCCAAAGGATCTGCGACTTGGCCTGAGGAGAAGCTTCCGACATCAAGCCCCTTGCCAAAGTCATCCACAATGCACAGATCTGAGTACAAGTTTTTTAAAACTTCTTGCCAGAGCACATCGAGTTCCCATGCGTGGGGTATGGTTATTGTGACTGCTGGTTGGGATGGACGGATCAAATCGTTCCACAATTATGGGCTACCAGTGCCTGTTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

710

Amino Acids

79.36

Weight (kDa)

6.04

Isoelectric Point (pI)

46.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_CDC20-Fz PF24807 209 - 292 1.2e-06 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_2nd PF25172 241 - 473 2.5e-15 WDR3 second beta-propeller domain
Beta-prop_THOC3 PF25174 249 - 288 6.9e-08 THOC3 beta-propeller domain
WD40_WDHD1_1st PF24817 251 - 295 1.2e-06 WDHD1 first WD40 domain
WD40 PF00400 252 - 283 1.1e-08 WD domain, G-beta repeat
Beta-prop_WDR5 PF25175 252 - 291 8e-07 WDR5 beta-propeller domain
WD40_Gbeta PF25391 338 - 563 7.9e-11 G protein beta WD-40 repeat protein
Beta-prop_WDR5 PF25175 344 - 568 9.7e-35 WDR5 beta-propeller domain
WD40 PF00400 351 - 386 1.8e-07 WD domain, G-beta repeat
Beta-prop_WDR36-Utp21_2nd PF25168 351 - 413 7.7e-08 WDR36/Utp21 second beta-propeller domain
WD40_Prp19 PF24814 351 - 476 8.1e-13 Prp19 WD40 domain
Beta-prop_WDR3_1st PF25173 352 - 430 1e-11 WDR3 first beta-propeller domain
WD40_CDC20-Fz PF24807 353 - 455 1.1e-09 CDC20/Fizzy WD40 domain
Beta-prop_CAF1B_HIR1 PF24105 356 - 412 4.2e-07 CAF1B/HIR1 beta-propeller domain
Beta-prop_THOC3 PF25174 359 - 566 3.2e-22 THOC3 beta-propeller domain
WDR55 PF24796 359 - 481 4.9e-06 WDR55
Beta-prop_WDR3_2nd PF25172 363 - 578 4.3e-14 WDR3 second beta-propeller domain
Beta-prop_EML_2 PF23414 371 - 475 5.7e-08 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR90_POC16_2nd PF23393 374 - 477 3.8e-06 WDR90/POC16, second beta-propeller
WD40 PF00400 392 - 428 1.3e-06 WD domain, G-beta repeat
WD40_WDHD1_1st PF24817 401 - 571 3e-11 WDHD1 first WD40 domain
Beta-prop_EML_2 PF23414 414 - 587 1.8e-10 Echinoderm microtubule-associated protein second beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1407
AarI CACCTGC 1 cut(s) 1879
Acc36I ACCTGC 2 cut(s) 1620, 1879
AccBSI CCGCTC 1 cut(s) 1747
AccIII TCCGGA 1 cut(s) 889
AciI CCGC 7 cut(s) 302, 598, 715, 956, 1340, 1399, 1747
AclWI GGATC 6 cut(s) 306, 893, 1101, 1505, 1930, 2093
AcsI RAATTY 8 cut(s) 23, 238, 374, 788, 1287, 1554, 1820, 1841
AcuI CTGAAG 6 cut(s) 486, 555, 584, 984, 1116, 1617
AfaI GTAC 5 cut(s) 809, 1323, 1454, 1732, 2000
AfiI CCNNNNNNNGG 5 cut(s) 714, 1107, 1784, 2046, 2047
AgsI TTSAA 9 cut(s) 342, 354, 721, 774, 1220, 1225, 1260, 1570, 1792
AjnI CCWGG 3 cut(s) 163, 756, 1100
AluBI AGCT 4 cut(s) 533, 734, 1710, 1948
AluI AGCT 4 cut(s) 533, 734, 1710, 1948
Alw21I GWGCWC 1 cut(s) 2030
Alw26I GTCTC 2 cut(s) 175, 687
AlwI GGATC 6 cut(s) 306, 893, 1101, 1505, 1930, 2093
AlwNI CAGNNNCTG 2 cut(s) 65, 2120
Ama87I CYCGRG 1 cut(s) 1904
Aor13HI TCCGGA 1 cut(s) 889
AoxI GGCC 3 cut(s) 759, 1800, 1934
ApeKI GCWGC 1 cut(s) 1604
ApoI RAATTY 8 cut(s) 23, 238, 374, 788, 1287, 1554, 1820, 1841
ArsI GACNNNNNNTTYG 2 cut(s) 1512, 1544
AspLEI GCGC 2 cut(s) 483, 1538
AspS9I GGNCC 2 cut(s) 600, 760
AsuC2I CCSGG 1 cut(s) 709
AsuHPI GGTGA 8 cut(s) 89, 341, 636, 836, 910, 1094, 1744, 1860
AsuII TTCGAA 1 cut(s) 324
AvaI CYCGRG 1 cut(s) 1904
AvaII GGWCC 1 cut(s) 600
AxyI CCTNAGG 1 cut(s) 1938
BbsI GAAGAC 2 cut(s) 492, 1122
Bbv12I GWGCWC 1 cut(s) 2030
BbvI GCAGC 1 cut(s) 1616
BciT130I CCWGG 3 cut(s) 165, 758, 1102
BciVI GTATCC 1 cut(s) 91
BclI TGATCA 1 cut(s) 1696
BcnI CCSGG 1 cut(s) 709
BcoDI GTCTC 2 cut(s) 175, 687
BfaI CTAG 4 cut(s) 108, 255, 812, 1734
BfmI CTRYAG 1 cut(s) 1690
BfuAI ACCTGC 2 cut(s) 1620, 1879
BfuI GTATCC 1 cut(s) 91
BglII AGATCT 1 cut(s) 1991
BisI GCNGC 2 cut(s) 1399, 1605
BlsI GCNGC 2 cut(s) 1400, 1606
BmcAI AGTACT 1 cut(s) 1732
Bme1390I CCNGG 4 cut(s) 165, 709, 758, 1102
Bme18I GGWCC 1 cut(s) 600
BmeT110I CYCGRG 1 cut(s) 1904
BmgT120I GGNCC 2 cut(s) 600, 760
BmiI GGNNCC 1 cut(s) 1470
BmrFI CCNGG 4 cut(s) 165, 709, 758, 1102
BmsI GCATC 6 cut(s) 28, 58, 65, 1157, 1426, 1750
BpiI GAAGAC 2 cut(s) 492, 1122
Bpu14I TTCGAA 1 cut(s) 324
BpuMI CCSGG 1 cut(s) 709
BsaAI YACGTR 1 cut(s) 983
BsaBI GATNNNNATC 1 cut(s) 316
BsaI GGTCTC 1 cut(s) 687
BsaJI CCNNGG 5 cut(s) 163, 164, 474, 1755, 1778
BsaWI WCCGGW 2 cut(s) 646, 889
BsaXI ACNNNNNCTCC 5 cut(s) 28, 379, 408, 409, 438
Bsc4I CCNNNNNNNGG 5 cut(s) 714, 1107, 1784, 2046, 2047
Bse1I ACTGG 1 cut(s) 2114
Bse21I CCTNAGG 1 cut(s) 1938
Bse3DI GCAATG 1 cut(s) 1055
Bse8I GATNNNNATC 1 cut(s) 316
BseAI TCCGGA 1 cut(s) 889
BseBI CCWGG 3 cut(s) 165, 758, 1102
BseDI CCNNGG 5 cut(s) 163, 164, 474, 1755, 1778
BseJI GATNNNNATC 1 cut(s) 316
BseLI CCNNNNNNNGG 5 cut(s) 714, 1107, 1784, 2046, 2047
BseMI GCAATG 1 cut(s) 1055
BseMII CTCAG 6 cut(s) 509, 744, 1733, 1877, 1929, 1986
BseNI ACTGG 1 cut(s) 2114
BseRI GAGGAG 3 cut(s) 62, 491, 1955
BseXI GCAGC 1 cut(s) 1616
BsgI GTGCAG 1 cut(s) 237
BshFI GGCC 3 cut(s) 761, 1802, 1936
BsiHKAI GWGCWC 1 cut(s) 2030
BsiHKCI CYCGRG 1 cut(s) 1904
BsiSI CCGG 3 cut(s) 647, 708, 890
BslI CCNNNNNNNGG 5 cut(s) 714, 1107, 1784, 2046, 2047
BsmAI GTCTC 2 cut(s) 175, 687
BsmBI CGTCTC 1 cut(s) 175
BsmI GAATGC 1 cut(s) 1606
BsnI GGCC 3 cut(s) 761, 1802, 1936
Bso31I GGTCTC 1 cut(s) 687
BsoBI CYCGRG 1 cut(s) 1904
Bsp119I TTCGAA 1 cut(s) 324
Bsp1286I GDGCHC 1 cut(s) 2030
Bsp13I TCCGGA 1 cut(s) 889
Bsp1407I TGTACA 1 cut(s) 1452
Bsp19I CCATGG 1 cut(s) 1755
BspACI CCGC 7 cut(s) 302, 598, 715, 956, 1340, 1399, 1747
BspANI GGCC 3 cut(s) 761, 1802, 1936
BspCNI CTCAG 6 cut(s) 510, 743, 1732, 1878, 1930, 1987
BspEI TCCGGA 1 cut(s) 889
BspHI TCATGA 1 cut(s) 1507
BspLI GGNNCC 1 cut(s) 1470
BspMAI CTGCAG 1 cut(s) 1694
BspMI ACCTGC 2 cut(s) 1620, 1879
BspPI GGATC 6 cut(s) 306, 893, 1101, 1505, 1930, 2093
BspQI GCTCTTC 2 cut(s) 355, 523
BspT104I TTCGAA 1 cut(s) 324
BspTNI GGTCTC 1 cut(s) 687
BsrBI CCGCTC 1 cut(s) 1747
BsrDI GCAATG 1 cut(s) 1055
BsrGI TGTACA 1 cut(s) 1452
BsrI ACTGG 1 cut(s) 2114
BssECI CCNNGG 5 cut(s) 163, 164, 474, 1755, 1778
BssT1I CCWWGG 1 cut(s) 1755
Bst2UI CCWGG 3 cut(s) 165, 758, 1102
Bst4CI ACNGT 7 cut(s) 667, 807, 922, 1147, 1316, 1457, 1779
Bst6I CTCTTC 6 cut(s) 343, 355, 462, 523, 531, 560
BstAPI GCANNNNNTGC 1 cut(s) 1176
BstAUI TGTACA 1 cut(s) 1452
BstBAI YACGTR 1 cut(s) 983
BstBI TTCGAA 1 cut(s) 324
BstC8I GCNNGC 1 cut(s) 1876
BstDEI CTNAG 8 cut(s) 11, 518, 730, 1719, 1804, 1886, 1938, 1995
BstDSI CCRYGG 2 cut(s) 1755, 1778
BstEII GGTNACC 1 cut(s) 642
BstENI CCTNNNNNAGG 1 cut(s) 1105
BstHHI GCGC 2 cut(s) 483, 1538
BstMAI GTCTC 2 cut(s) 175, 687
BstMWI GCNNNNNNNGC 6 cut(s) 847, 1176, 1275, 1398, 1769, 2116
BstNI CCWGG 3 cut(s) 165, 758, 1102
BstNSI RCATGY 4 cut(s) 612, 1014, 1814, 1878
BstPI GGTNACC 1 cut(s) 642
BstSCI CCNGG 4 cut(s) 163, 707, 756, 1100
BstSFI CTRYAG 1 cut(s) 1690
BstV1I GCAGC 1 cut(s) 1616
BstV2I GAAGAC 2 cut(s) 492, 1122
BstX2I RGATCY 5 cut(s) 311, 898, 1093, 1922, 1991
BstXI CCANNNNNNTGG 1 cut(s) 2105
BstYI RGATCY 5 cut(s) 311, 898, 1093, 1922, 1991
Bsu36I CCTNAGG 1 cut(s) 1938
BsuI GTATCC 1 cut(s) 91
BsuRI GGCC 3 cut(s) 761, 1802, 1936
BtgI CCRYGG 2 cut(s) 1755, 1778
BtsI GCAGTG 1 cut(s) 1699
BtsIMutI CAGTG 6 cut(s) 66, 451, 1170, 1321, 1699, 2121
BveI ACCTGC 2 cut(s) 1620, 1879
Cac8I GCNNGC 1 cut(s) 1876
CaiI CAGNNNCTG 2 cut(s) 65, 2120
CciI TCATGA 1 cut(s) 1507
CfoI GCGC 2 cut(s) 483, 1538
Cfr13I GGNCC 2 cut(s) 600, 760
CseI GACGC 1 cut(s) 1168
Csp6I GTAC 5 cut(s) 808, 1322, 1453, 1731, 1999
CviQI GTAC 5 cut(s) 808, 1322, 1453, 1731, 1999
DdeI CTNAG 8 cut(s) 11, 518, 730, 1719, 1804, 1886, 1938, 1995
DraI TTTAAA 1 cut(s) 2011
Eam1104I CTCTTC 6 cut(s) 343, 355, 462, 523, 531, 560
EarI CTCTTC 6 cut(s) 343, 355, 462, 523, 531, 560
Eco130I CCWWGG 1 cut(s) 1755
Eco147I AGGCCT 1 cut(s) 1802
Eco31I GGTCTC 1 cut(s) 687
Eco32I GATATC 1 cut(s) 754
Eco47I GGWCC 1 cut(s) 600
Eco57I CTGAAG 6 cut(s) 486, 555, 584, 984, 1116, 1617
Eco81I CCTNAGG 1 cut(s) 1938
Eco88I CYCGRG 1 cut(s) 1904
Eco91I GGTNACC 1 cut(s) 642
EcoNI CCTNNNNNAGG 1 cut(s) 1105
EcoO65I GGTNACC 1 cut(s) 642
EcoRI GAATTC 3 cut(s) 23, 1287, 1554
EcoRII CCWGG 3 cut(s) 163, 756, 1100
EcoRV GATATC 1 cut(s) 754
EcoT14I CCWWGG 1 cut(s) 1755
ErhI CCWWGG 1 cut(s) 1755
Esp3I CGTCTC 1 cut(s) 175
FalI AAGNNNNNCTT 2 cut(s) 334, 366
FauNDI CATATG 1 cut(s) 1394
FbaI TGATCA 1 cut(s) 1696
Fnu4HI GCNGC 2 cut(s) 1399, 1605
Fsp4HI GCNGC 2 cut(s) 1399, 1605
FspBI CTAG 4 cut(s) 108, 255, 812, 1734
GlaI GCGC 2 cut(s) 482, 1537
GluI GCNGC 2 cut(s) 1399, 1605
HaeIII GGCC 3 cut(s) 761, 1802, 1936
HapII CCGG 3 cut(s) 647, 708, 890
HgaI GACGC 1 cut(s) 1168
HhaI GCGC 2 cut(s) 483, 1538
Hin6I GCGC 2 cut(s) 481, 1536
HinP1I GCGC 2 cut(s) 481, 1536
HincII GTYRAC 2 cut(s) 1048, 1138
HindII GTYRAC 2 cut(s) 1048, 1138
HindIII AAGCTT 2 cut(s) 1708, 1946
HpaII CCGG 3 cut(s) 647, 708, 890
HphI GGTGA 8 cut(s) 89, 341, 636, 836, 910, 1094, 1744, 1860
Hpy166II GTNNAC 3 cut(s) 1048, 1138, 1752
Hpy188III TCNNGA 9 cut(s) 128, 197, 455, 797, 890, 1508, 1514, 1700, 1847
Hpy8I GTNNAC 3 cut(s) 1048, 1138, 1752
HpyAV CCTTC 7 cut(s) 169, 320, 433, 443, 688, 715, 1459
HpyCH4III ACNGT 7 cut(s) 667, 807, 922, 1147, 1316, 1457, 1779
HpyCH4IV ACGT 1 cut(s) 982
HpyF10VI GCNNNNNNNGC 6 cut(s) 847, 1176, 1275, 1398, 1769, 2116
HpyF3I CTNAG 8 cut(s) 11, 518, 730, 1719, 1804, 1886, 1938, 1995
HpySE526I ACGT 1 cut(s) 982
HspAI GCGC 2 cut(s) 481, 1536
Kpn2I TCCGGA 1 cut(s) 889
Ksp22I TGATCA 1 cut(s) 1696
LguI GCTCTTC 2 cut(s) 355, 523
LmnI GCTCC 2 cut(s) 478, 1474
Lsp1109I GCAGC 1 cut(s) 1616
LweI GCATC 6 cut(s) 28, 58, 65, 1157, 1426, 1750
MaeI CTAG 4 cut(s) 108, 255, 812, 1734
MaeII ACGT 1 cut(s) 982
MaeIII GTNAC 5 cut(s) 460, 642, 1207, 1528, 2062
MbiI CCGCTC 1 cut(s) 1747
MflI RGATCY 5 cut(s) 311, 898, 1093, 1922, 1991
MhlI GDGCHC 1 cut(s) 2030
MlyI GAGTC 4 cut(s) 16, 479, 852, 1916
MmeI TCCRAC 3 cut(s) 75, 1558, 1976
MroI TCCGGA 1 cut(s) 889
MseI TTAA 3 cut(s) 573, 1595, 2010
MslI CAYNNNNRTG 5 cut(s) 89, 1074, 1080, 1873, 2103
MspI CCGG 3 cut(s) 647, 708, 890
MspR9I CCNGG 4 cut(s) 165, 709, 758, 1102
Mva1269I GAATGC 1 cut(s) 1606
MvaI CCWGG 3 cut(s) 165, 758, 1102
MwoI GCNNNNNNNGC 6 cut(s) 847, 1176, 1275, 1398, 1769, 2116
NciI CCSGG 1 cut(s) 709
NcoI CCATGG 1 cut(s) 1755
NdeI CATATG 1 cut(s) 1394
NlaIV GGNNCC 1 cut(s) 1470
NmuCI GTSAC 4 cut(s) 642, 1207, 1528, 2062
NspI RCATGY 4 cut(s) 612, 1014, 1814, 1878
NspV TTCGAA 1 cut(s) 324
PaeI GCATGC 1 cut(s) 1878
PaeR7I CTCGAG 1 cut(s) 1904
PagI TCATGA 1 cut(s) 1507
PaqCI CACCTGC 1 cut(s) 1879
PasI CCCWGGG 1 cut(s) 164
PceI AGGCCT 1 cut(s) 1802
PciSI GCTCTTC 2 cut(s) 355, 523
PcsI WCGNNNNNNNCGW 1 cut(s) 33
PctI GAATGC 1 cut(s) 1606
PfeI GAWTC 7 cut(s) 862, 925, 943, 1004, 1541, 1667, 1895
PfoI TCCNGGA 1 cut(s) 707
PkrI GCNGC 2 cut(s) 1400, 1606
PleI GAGTC 4 cut(s) 15, 478, 851, 1915
PpsI GAGTC 4 cut(s) 15, 478, 851, 1915
Ppu21I YACGTR 1 cut(s) 983
PsiI TTATAA 1 cut(s) 1407
Psp6I CCWGG 3 cut(s) 163, 756, 1100
PspEI GGTNACC 1 cut(s) 642
PspGI CCWGG 3 cut(s) 163, 756, 1100
PspN4I GGNNCC 1 cut(s) 1470
PspPI GGNCC 2 cut(s) 600, 760
PspXI VCTCGAGB 1 cut(s) 1904
PstI CTGCAG 1 cut(s) 1694
PstNI CAGNNNCTG 2 cut(s) 65, 2120
PsuI RGATCY 5 cut(s) 311, 898, 1093, 1922, 1991
RsaI GTAC 5 cut(s) 809, 1323, 1454, 1732, 2000
RsaNI GTAC 5 cut(s) 808, 1322, 1453, 1731, 1999
RseI CAYNNNNRTG 5 cut(s) 89, 1074, 1080, 1873, 2103
SapI GCTCTTC 2 cut(s) 355, 523
SaqAI TTAA 3 cut(s) 573, 1595, 2010
SatI GCNGC 2 cut(s) 1399, 1605
Sau96I GGNCC 2 cut(s) 600, 760
ScaI AGTACT 1 cut(s) 1732
SchI GAGTC 4 cut(s) 16, 479, 852, 1916
ScrFI CCNGG 4 cut(s) 165, 709, 758, 1102
SduI GDGCHC 1 cut(s) 2030
SfaNI GCATC 6 cut(s) 28, 58, 65, 1157, 1426, 1750
SfcI CTRYAG 1 cut(s) 1690
Sfr274I CTCGAG 1 cut(s) 1904
SfuI TTCGAA 1 cut(s) 324
SinI GGWCC 1 cut(s) 600
SlaI CTCGAG 1 cut(s) 1904
SmiMI CAYNNNNRTG 5 cut(s) 89, 1074, 1080, 1873, 2103
SmlI CTYRAG 1 cut(s) 1904
SmoI CTYRAG 1 cut(s) 1904
SphI GCATGC 1 cut(s) 1878
SseBI AGGCCT 1 cut(s) 1802
SsiI CCGC 7 cut(s) 302, 598, 715, 956, 1340, 1399, 1747
SspMI CTAG 4 cut(s) 108, 255, 812, 1734
StuI AGGCCT 1 cut(s) 1802
StyD4I CCNGG 4 cut(s) 163, 707, 756, 1100
StyI CCWWGG 1 cut(s) 1755
TaaI ACNGT 7 cut(s) 667, 807, 922, 1147, 1316, 1457, 1779
TaiI ACGT 1 cut(s) 985
TaqI TCGA 8 cut(s) 36, 266, 324, 454, 514, 1905, 2033, 2125
TatI WGTACW 3 cut(s) 1452, 1730, 1998
TauI GCSGC 1 cut(s) 1401
TfiI GAWTC 7 cut(s) 862, 925, 943, 1004, 1541, 1667, 1895
Tru1I TTAA 3 cut(s) 573, 1595, 2010
Tru9I TTAA 3 cut(s) 573, 1595, 2010
TscAI CASTG 6 cut(s) 66, 451, 1177, 1321, 1699, 2121
TseFI GTSAC 4 cut(s) 642, 1207, 1528, 2062
TseI GCWGC 1 cut(s) 1604
Tsp45I GTSAC 4 cut(s) 642, 1207, 1528, 2062
TspGWI ACGGA 2 cut(s) 1756, 2098
TspRI CASTG 6 cut(s) 66, 451, 1177, 1321, 1699, 2121
VpaK11BI GGWCC 1 cut(s) 600
XagI CCTNNNNNAGG 1 cut(s) 1105
XapI RAATTY 8 cut(s) 23, 238, 374, 788, 1287, 1554, 1820, 1841
XceI RCATGY 4 cut(s) 612, 1014, 1814, 1878
XhoI CTCGAG 1 cut(s) 1904
XspI CTAG 4 cut(s) 108, 255, 812, 1734
ZrmI AGTACT 1 cut(s) 1732
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.