WD repeat-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G24320 AT5G24320 |
| fragaria_vesca | FvH4_7g32140 FvH4_7g32140 |
| malus_domestica | MD01G1224100.v1.1 MD07G1294900.v1.1 |
| prunus_persica | Prupe.2G314500_v2.0.a1 Prupe.2G314500_v2.0.a1 Prupe.2G314500_v2.0.a1 Prupe.2G314500_v2.0.a1 |
| pyrus_communis | pycom01g23300 pycom07g26750 |
| rosa_chinensis | RchiOBHm_Chr1g0381741 |
| rosa_laevigata | RLG00000026211 |
| rosa_multiflora | Rmu_ssc0000316.1_g000005 |
| rosa_roxburghii | Rroxscaffold_4G00278480 |
| rosa_rugosa | Rorug01G0430600 |
| rosa_samantha | Rh1AG454000 Rh1BG411300 Rh1CG425600 Rh1DG443100 |
| rosa_wichuraiana | Rw1G039620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1458 |
| AarI | CACCTGC | 1 cut(s) | 1930 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 523 |
| Acc36I | ACCTGC | 1 cut(s) | 1930 |
| AccIII | TCCGGA | 1 cut(s) | 1089 |
| AciI | CCGC | 7 cut(s) | 15, 190, 649, 766, 1221, 1450, 2172 |
| AclWI | GGATC | 7 cut(s) | 234, 482, 495, 944, 1152, 1981, 2140 |
| AcoI | YGGCCR | 2 cut(s) | 1587, 1985 |
| AcsI | RAATTY | 6 cut(s) | 244, 442, 839, 1338, 1605, 1891 |
| AcuI | CTGAAG | 2 cut(s) | 635, 1668 |
| AdeI | CACNNNGTG | 1 cut(s) | 540 |
| AfaI | GTAC | 4 cut(s) | 498, 1326, 2051, 2169 |
| AfeI | AGCGCT | 1 cut(s) | 1799 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 78, 1096, 1835 |
| AgsI | TTSAA | 3 cut(s) | 772, 1271, 1311 |
| AjnI | CCWGG | 1 cut(s) | 807 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 101, 133 |
| AluBI | AGCT | 3 cut(s) | 9, 605, 1999 |
| AluI | AGCT | 3 cut(s) | 9, 605, 1999 |
| Alw26I | GTCTC | 4 cut(s) | 89, 564, 1524, 1708 |
| AlwI | GGATC | 7 cut(s) | 234, 482, 495, 944, 1152, 1981, 2140 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 83 |
| Ama87I | CYCGRG | 1 cut(s) | 169 |
| Aor13HI | TCCGGA | 1 cut(s) | 1089 |
| Aor51HI | AGCGCT | 1 cut(s) | 1799 |
| AoxI | GGCC | 3 cut(s) | 192, 1587, 1985 |
| ApeKI | GCWGC | 3 cut(s) | 713, 1347, 1880 |
| ApoI | RAATTY | 6 cut(s) | 244, 442, 839, 1338, 1605, 1891 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1295, 1761 |
| AspLEI | GCGC | 3 cut(s) | 534, 824, 1800 |
| AspS9I | GGNCC | 3 cut(s) | 184, 192, 1851 |
| AsuC2I | CCSGG | 2 cut(s) | 170, 171 |
| AsuHPI | GGTGA | 4 cut(s) | 743, 1142, 1585, 1911 |
| AvaI | CYCGRG | 1 cut(s) | 169 |
| AvaII | GGWCC | 2 cut(s) | 184, 1851 |
| AxyI | CCTNAGG | 1 cut(s) | 1040 |
| BaeGI | GKGCMC | 1 cut(s) | 736 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1817, 1850 |
| BalI | TGGCCA | 1 cut(s) | 1987 |
| BamHI | GGATCC | 1 cut(s) | 487 |
| BanII | GRGCYC | 1 cut(s) | 2015 |
| BauI | CACGAG | 1 cut(s) | 1596 |
| BbsI | GAAGAC | 1 cut(s) | 1078 |
| BbvI | GCAGC | 3 cut(s) | 700, 1334, 1867 |
| BceAI | ACGGC | 2 cut(s) | 721, 1602 |
| BciT130I | CCWGG | 1 cut(s) | 809 |
| BciVI | GTATCC | 1 cut(s) | 603 |
| BcnI | CCSGG | 2 cut(s) | 170, 171 |
| BcoDI | GTCTC | 4 cut(s) | 89, 564, 1524, 1708 |
| BfaI | CTAG | 3 cut(s) | 600, 1566, 1722 |
| BfmI | CTRYAG | 1 cut(s) | 2118 |
| BfoI | RGCGCY | 1 cut(s) | 1801 |
| BfuAI | ACCTGC | 1 cut(s) | 1930 |
| BfuI | GTATCC | 1 cut(s) | 603 |
| BglII | AGATCT | 1 cut(s) | 1787 |
| BisI | GCNGC | 5 cut(s) | 714, 1222, 1348, 1450, 1881 |
| BlsI | GCNGC | 5 cut(s) | 715, 1223, 1349, 1451, 1882 |
| Bme1390I | CCNGG | 3 cut(s) | 170, 171, 809 |
| Bme18I | GGWCC | 2 cut(s) | 184, 1851 |
| BmeT110I | CYCGRG | 1 cut(s) | 169 |
| BmgT120I | GGNCC | 3 cut(s) | 184, 192, 1851 |
| BmiI | GGNNCC | 4 cut(s) | 132, 489, 1661, 1852 |
| BmrFI | CCNGG | 3 cut(s) | 170, 171, 809 |
| BmsI | GCATC | 4 cut(s) | 64, 71, 1208, 1477 |
| BpiI | GAAGAC | 1 cut(s) | 1078 |
| BpmI | CTGGAG | 1 cut(s) | 224 |
| BpuMI | CCSGG | 2 cut(s) | 170, 171 |
| Bsa29I | ATCGAT | 1 cut(s) | 2135 |
| BsaAI | YACGTR | 2 cut(s) | 500, 1328 |
| BsaJI | CCNNGG | 3 cut(s) | 168, 169, 1829 |
| BsaWI | WCCGGW | 2 cut(s) | 133, 1089 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1410, 1440 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 78, 1096, 1835 |
| Bse118I | RCCGGY | 1 cut(s) | 186 |
| Bse1I | ACTGG | 5 cut(s) | 754, 1280, 1546, 2085, 2165 |
| Bse21I | CCTNAGG | 1 cut(s) | 1040 |
| Bse3DI | GCAATG | 3 cut(s) | 715, 840, 1106 |
| BseAI | TCCGGA | 1 cut(s) | 1089 |
| BseBI | CCWGG | 1 cut(s) | 809 |
| BseCI | ATCGAT | 1 cut(s) | 2135 |
| BseDI | CCNNGG | 3 cut(s) | 168, 169, 1829 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 78, 1096, 1835 |
| BseMI | GCAATG | 3 cut(s) | 715, 840, 1106 |
| BseMII | CTCAG | 3 cut(s) | 209, 1784, 1951 |
| BseNI | ACTGG | 5 cut(s) | 754, 1280, 1546, 2085, 2165 |
| BseRI | GAGGAG | 2 cut(s) | 602, 2006 |
| BseSI | GKGCMC | 1 cut(s) | 736 |
| BseX3I | CGGCCG | 1 cut(s) | 1587 |
| BseXI | GCAGC | 3 cut(s) | 700, 1334, 1867 |
| BseYI | CCCAGC | 1 cut(s) | 605 |
| BsgI | GTGCAG | 1 cut(s) | 1546 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1590 |
| BshFI | GGCC | 3 cut(s) | 194, 1589, 1987 |
| BshVI | ATCGAT | 1 cut(s) | 2135 |
| BsiEI | CGRYCG | 1 cut(s) | 1590 |
| BsiHKCI | CYCGRG | 1 cut(s) | 169 |
| BsiSI | CCGG | 5 cut(s) | 134, 170, 187, 1090, 1641 |
| BslFI | GGGAC | 3 cut(s) | 228, 831, 1864 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 78, 1096, 1835 |
| BsmAI | GTCTC | 4 cut(s) | 89, 564, 1524, 1708 |
| BsmFI | GGGAC | 3 cut(s) | 228, 831, 1864 |
| BsnI | GGCC | 3 cut(s) | 194, 1589, 1987 |
| BsoBI | CYCGRG | 1 cut(s) | 169 |
| Bsp1286I | GDGCHC | 2 cut(s) | 736, 2015 |
| Bsp13I | TCCGGA | 1 cut(s) | 1089 |
| BspACI | CCGC | 7 cut(s) | 15, 190, 649, 766, 1221, 1450, 2172 |
| BspANI | GGCC | 3 cut(s) | 194, 1589, 1987 |
| BspCNI | CTCAG | 3 cut(s) | 210, 1783, 1950 |
| BspDI | ATCGAT | 1 cut(s) | 2135 |
| BspEI | TCCGGA | 1 cut(s) | 1089 |
| BspHI | TCATGA | 1 cut(s) | 1750 |
| BspLI | GGNNCC | 4 cut(s) | 132, 489, 1661, 1852 |
| BspMAI | CTGCAG | 1 cut(s) | 2122 |
| BspMI | ACCTGC | 1 cut(s) | 1930 |
| BspPI | GGATC | 7 cut(s) | 234, 482, 495, 944, 1152, 1981, 2140 |
| BspQI | GCTCTTC | 1 cut(s) | 792 |
| BsrDI | GCAATG | 3 cut(s) | 715, 840, 1106 |
| BsrFI | RCCGGY | 1 cut(s) | 186 |
| BsrI | ACTGG | 5 cut(s) | 754, 1280, 1546, 2085, 2165 |
| BssAI | RCCGGY | 1 cut(s) | 186 |
| BssECI | CCNNGG | 3 cut(s) | 168, 169, 1829 |
| BssSI | CACGAG | 1 cut(s) | 1596 |
| BssT1I | CCWWGG | 1 cut(s) | 1829 |
| Bst2BI | CACGAG | 1 cut(s) | 1596 |
| Bst2UI | CCWGG | 1 cut(s) | 809 |
| Bst4CI | ACNGT | 4 cut(s) | 973, 1198, 1390, 1624 |
| Bst6I | CTCTTC | 4 cut(s) | 45, 516, 611, 792 |
| BstBAI | YACGTR | 2 cut(s) | 500, 1328 |
| BstC8I | GCNNGC | 2 cut(s) | 192, 1502 |
| BstDEI | CTNAG | 6 cut(s) | 218, 528, 862, 1040, 1770, 1937 |
| BstH2I | RGCGCY | 1 cut(s) | 1801 |
| BstHHI | GCGC | 3 cut(s) | 534, 824, 1800 |
| BstMAI | GTCTC | 4 cut(s) | 89, 564, 1524, 1708 |
| BstMCI | CGRYCG | 1 cut(s) | 1590 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 830, 898, 1227, 1449 |
| BstNI | CCWGG | 1 cut(s) | 809 |
| BstNSI | RCATGY | 4 cut(s) | 432, 663, 1065, 1929 |
| BstSCI | CCNGG | 3 cut(s) | 168, 169, 807 |
| BstSFI | CTRYAG | 1 cut(s) | 2118 |
| BstSLI | GKGCMC | 1 cut(s) | 736 |
| BstSNI | TACGTA | 1 cut(s) | 1328 |
| BstV1I | GCAGC | 3 cut(s) | 700, 1334, 1867 |
| BstV2I | GAAGAC | 1 cut(s) | 1078 |
| BstX2I | RGATCY | 4 cut(s) | 487, 1144, 1787, 1973 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 202, 2156 |
| BstYI | RGATCY | 4 cut(s) | 487, 1144, 1787, 1973 |
| BstZI | CGGCCG | 1 cut(s) | 1587 |
| Bsu15I | ATCGAT | 1 cut(s) | 2135 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1040 |
| BsuI | GTATCC | 1 cut(s) | 603 |
| BsuRI | GGCC | 3 cut(s) | 194, 1589, 1987 |
| BsuTUI | ATCGAT | 1 cut(s) | 2135 |
| BtsIMutI | CAGTG | 4 cut(s) | 761, 978, 1287, 1309 |
| BveI | ACCTGC | 1 cut(s) | 1930 |
| Cac8I | GCNNGC | 2 cut(s) | 192, 1502 |
| CaiI | CAGNNNCTG | 1 cut(s) | 83 |
| CciI | TCATGA | 1 cut(s) | 1750 |
| CfoI | GCGC | 3 cut(s) | 534, 824, 1800 |
| Cfr10I | RCCGGY | 1 cut(s) | 186 |
| Cfr13I | GGNCC | 3 cut(s) | 184, 192, 1851 |
| Cfr9I | CCCGGG | 1 cut(s) | 169 |
| ClaI | ATCGAT | 1 cut(s) | 2135 |
| CseI | GACGC | 1 cut(s) | 53 |
| Csp6I | GTAC | 4 cut(s) | 497, 1325, 2050, 2168 |
| CviQI | GTAC | 4 cut(s) | 497, 1325, 2050, 2168 |
| DdeI | CTNAG | 6 cut(s) | 218, 528, 862, 1040, 1770, 1937 |
| DraI | TTTAAA | 2 cut(s) | 1843, 2062 |
| DraIII | CACNNNGTG | 1 cut(s) | 540 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 523 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 523 |
| EaeI | YGGCCR | 2 cut(s) | 1587, 1985 |
| EagI | CGGCCG | 1 cut(s) | 1587 |
| Eam1104I | CTCTTC | 4 cut(s) | 45, 516, 611, 792 |
| EarI | CTCTTC | 4 cut(s) | 45, 516, 611, 792 |
| EclXI | CGGCCG | 1 cut(s) | 1587 |
| Eco105I | TACGTA | 1 cut(s) | 1328 |
| Eco130I | CCWWGG | 1 cut(s) | 1829 |
| Eco24I | GRGCYC | 1 cut(s) | 2015 |
| Eco32I | GATATC | 1 cut(s) | 805 |
| Eco47I | GGWCC | 2 cut(s) | 184, 1851 |
| Eco47III | AGCGCT | 1 cut(s) | 1799 |
| Eco52I | CGGCCG | 1 cut(s) | 1587 |
| Eco57I | CTGAAG | 2 cut(s) | 635, 1668 |
| Eco81I | CCTNAGG | 1 cut(s) | 1040 |
| Eco88I | CYCGRG | 1 cut(s) | 169 |
| EcoRI | GAATTC | 2 cut(s) | 244, 1605 |
| EcoRII | CCWGG | 1 cut(s) | 807 |
| EcoRV | GATATC | 1 cut(s) | 805 |
| EcoT14I | CCWWGG | 1 cut(s) | 1829 |
| EcoT22I | ATGCAT | 1 cut(s) | 2098 |
| EcoT38I | GRGCYC | 1 cut(s) | 2015 |
| ErhI | CCWWGG | 1 cut(s) | 1829 |
| FaqI | GGGAC | 3 cut(s) | 228, 831, 1864 |
| FauI | CCCGC | 1 cut(s) | 183 |
| Fnu4HI | GCNGC | 5 cut(s) | 714, 1222, 1348, 1450, 1881 |
| FriOI | GRGCYC | 1 cut(s) | 2015 |
| Fsp4HI | GCNGC | 5 cut(s) | 714, 1222, 1348, 1450, 1881 |
| FspBI | CTAG | 3 cut(s) | 600, 1566, 1722 |
| GlaI | GCGC | 3 cut(s) | 533, 823, 1799 |
| GluI | GCNGC | 5 cut(s) | 714, 1222, 1348, 1450, 1881 |
| GsaI | CCCAGC | 1 cut(s) | 609 |
| GsuI | CTGGAG | 1 cut(s) | 224 |
| HaeII | RGCGCY | 1 cut(s) | 1801 |
| HaeIII | GGCC | 3 cut(s) | 194, 1589, 1987 |
| HapII | CCGG | 5 cut(s) | 134, 170, 187, 1090, 1641 |
| HgaI | GACGC | 1 cut(s) | 53 |
| HhaI | GCGC | 3 cut(s) | 534, 824, 1800 |
| Hin6I | GCGC | 3 cut(s) | 532, 822, 1798 |
| HinP1I | GCGC | 3 cut(s) | 532, 822, 1798 |
| HindIII | AAGCTT | 1 cut(s) | 1997 |
| HpaII | CCGG | 5 cut(s) | 134, 170, 187, 1090, 1641 |
| HphI | GGTGA | 4 cut(s) | 743, 1142, 1585, 1911 |
| Hpy166II | GTNNAC | 2 cut(s) | 751, 2162 |
| Hpy188III | TCNNGA | 9 cut(s) | 203, 509, 848, 1090, 1596, 1735, 1751, 1836, 1966 |
| Hpy8I | GTNNAC | 2 cut(s) | 751, 2162 |
| HpyAV | CCTTC | 9 cut(s) | 127, 409, 497, 622, 766, 1006, 1524, 1687, 1963 |
| HpyCH4III | ACNGT | 4 cut(s) | 973, 1198, 1390, 1624 |
| HpyCH4IV | ACGT | 2 cut(s) | 499, 1327 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 830, 898, 1227, 1449 |
| HpyF3I | CTNAG | 6 cut(s) | 218, 528, 862, 1040, 1770, 1937 |
| HpySE526I | ACGT | 2 cut(s) | 499, 1327 |
| HspAI | GCGC | 3 cut(s) | 532, 822, 1798 |
| Kpn2I | TCCGGA | 1 cut(s) | 1089 |
| LguI | GCTCTTC | 1 cut(s) | 792 |
| Lsp1109I | GCAGC | 3 cut(s) | 700, 1334, 1867 |
| LweI | GCATC | 4 cut(s) | 64, 71, 1208, 1477 |
| MaeI | CTAG | 3 cut(s) | 600, 1566, 1722 |
| MaeII | ACGT | 2 cut(s) | 499, 1327 |
| MaeIII | GTNAC | 6 cut(s) | 514, 1258, 1367, 1384, 1579, 2113 |
| MfeI | CAATTG | 4 cut(s) | 124, 399, 566, 1481 |
| MflI | RGATCY | 4 cut(s) | 487, 1144, 1787, 1973 |
| MhlI | GDGCHC | 2 cut(s) | 736, 2015 |
| MlsI | TGGCCA | 1 cut(s) | 1987 |
| MluNI | TGGCCA | 1 cut(s) | 1987 |
| MlyI | GAGTC | 4 cut(s) | 361, 533, 903, 1608 |
| MmeI | TCCRAC | 4 cut(s) | 271, 387, 1195, 2027 |
| Mox20I | TGGCCA | 1 cut(s) | 1987 |
| Mph1103I | ATGCAT | 1 cut(s) | 2098 |
| MroI | TCCGGA | 1 cut(s) | 1089 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1295, 1761 |
| MscI | TGGCCA | 1 cut(s) | 1987 |
| MseI | TTAA | 6 cut(s) | 180, 624, 744, 1275, 1842, 2061 |
| MslI | CAYNNNNRTG | 5 cut(s) | 373, 1125, 1131, 1924, 2154 |
| Msp20I | TGGCCA | 1 cut(s) | 1987 |
| MspI | CCGG | 5 cut(s) | 134, 170, 187, 1090, 1641 |
| MspR9I | CCNGG | 3 cut(s) | 170, 171, 809 |
| MunI | CAATTG | 4 cut(s) | 124, 399, 566, 1481 |
| MvaI | CCWGG | 1 cut(s) | 809 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 830, 898, 1227, 1449 |
| NciI | CCSGG | 2 cut(s) | 170, 171 |
| NlaIV | GGNNCC | 4 cut(s) | 132, 489, 1661, 1852 |
| NmuCI | GTSAC | 4 cut(s) | 514, 1258, 1367, 1579 |
| NsiI | ATGCAT | 1 cut(s) | 2098 |
| NspI | RCATGY | 4 cut(s) | 432, 663, 1065, 1929 |
| PagI | TCATGA | 1 cut(s) | 1750 |
| PaqCI | CACCTGC | 1 cut(s) | 1930 |
| PciSI | GCTCTTC | 1 cut(s) | 792 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2141 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1295, 1761 |
| PkrI | GCNGC | 5 cut(s) | 715, 1223, 1349, 1451, 1882 |
| PleI | GAGTC | 4 cut(s) | 360, 532, 902, 1607 |
| PpsI | GAGTC | 4 cut(s) | 360, 532, 902, 1607 |
| Ppu21I | YACGTR | 2 cut(s) | 500, 1328 |
| PsiI | TTATAA | 1 cut(s) | 1458 |
| Psp6I | CCWGG | 1 cut(s) | 807 |
| PspFI | CCCAGC | 1 cut(s) | 605 |
| PspGI | CCWGG | 1 cut(s) | 807 |
| PspN4I | GGNNCC | 4 cut(s) | 132, 489, 1661, 1852 |
| PspPI | GGNCC | 3 cut(s) | 184, 192, 1851 |
| PstI | CTGCAG | 1 cut(s) | 2122 |
| PstNI | CAGNNNCTG | 1 cut(s) | 83 |
| PsuI | RGATCY | 4 cut(s) | 487, 1144, 1787, 1973 |
| RsaI | GTAC | 4 cut(s) | 498, 1326, 2051, 2169 |
| RsaNI | GTAC | 4 cut(s) | 497, 1325, 2050, 2168 |
| RseI | CAYNNNNRTG | 5 cut(s) | 373, 1125, 1131, 1924, 2154 |
| SapI | GCTCTTC | 1 cut(s) | 792 |
| SaqAI | TTAA | 6 cut(s) | 180, 624, 744, 1275, 1842, 2061 |
| SatI | GCNGC | 5 cut(s) | 714, 1222, 1348, 1450, 1881 |
| Sau96I | GGNCC | 3 cut(s) | 184, 192, 1851 |
| SchI | GAGTC | 4 cut(s) | 361, 533, 903, 1608 |
| ScrFI | CCNGG | 3 cut(s) | 170, 171, 809 |
| SduI | GDGCHC | 2 cut(s) | 736, 2015 |
| SfaNI | GCATC | 4 cut(s) | 64, 71, 1208, 1477 |
| SfcI | CTRYAG | 1 cut(s) | 2118 |
| SinI | GGWCC | 2 cut(s) | 184, 1851 |
| SmaI | CCCGGG | 1 cut(s) | 171 |
| SmiI | ATTTAAAT | 1 cut(s) | 1843 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 373, 1125, 1131, 1924, 2154 |
| SnaBI | TACGTA | 1 cut(s) | 1328 |
| SsiI | CCGC | 7 cut(s) | 15, 190, 649, 766, 1221, 1450, 2172 |
| SspMI | CTAG | 3 cut(s) | 600, 1566, 1722 |
| StyD4I | CCNGG | 3 cut(s) | 168, 169, 807 |
| StyI | CCWWGG | 1 cut(s) | 1829 |
| SwaI | ATTTAAAT | 1 cut(s) | 1843 |
| TaaI | ACNGT | 4 cut(s) | 973, 1198, 1390, 1624 |
| TaiI | ACGT | 2 cut(s) | 502, 1330 |
| TaqI | TCGA | 5 cut(s) | 65, 102, 580, 2009, 2135 |
| TaqII | GACCGA | 2 cut(s) | 345, 533 |
| TatI | WGTACW | 1 cut(s) | 2049 |
| TauI | GCSGC | 2 cut(s) | 1224, 1452 |
| Tru1I | TTAA | 6 cut(s) | 180, 624, 744, 1275, 1842, 2061 |
| Tru9I | TTAA | 6 cut(s) | 180, 624, 744, 1275, 1842, 2061 |
| TscAI | CASTG | 4 cut(s) | 761, 978, 1287, 1309 |
| TseFI | GTSAC | 4 cut(s) | 514, 1258, 1367, 1579 |
| TseI | GCWGC | 3 cut(s) | 713, 1347, 1880 |
| Tsp45I | GTSAC | 4 cut(s) | 514, 1258, 1367, 1579 |
| TspGWI | ACGGA | 2 cut(s) | 528, 1512 |
| TspMI | CCCGGG | 1 cut(s) | 169 |
| TspRI | CASTG | 4 cut(s) | 761, 978, 1287, 1309 |
| VpaK11BI | GGWCC | 2 cut(s) | 184, 1851 |
| XapI | RAATTY | 6 cut(s) | 244, 442, 839, 1338, 1605, 1891 |
| XceI | RCATGY | 4 cut(s) | 432, 663, 1065, 1929 |
| XmaI | CCCGGG | 1 cut(s) | 169 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1295, 1761 |
| XspI | CTAG | 3 cut(s) | 600, 1566, 1722 |
| Zsp2I | ATGCAT | 1 cut(s) | 2098 |